Carg06862 (gene) Silver-seed gourd

Overview
NameCarg06862
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionblue copper protein
LocationCucurbita_argyrosperma_scaffold_065 : 13074 .. 15660 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGGACTTCATATATCCCTCCTGCAGACCCAAAATATCTCTCAGTGGTTCTAGTTCGCTTCCAATTCACGAATCTCTAGAAGAATTAATGGAACAGAGGAAGTACGGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTTGATTATCAAAAATGGACAGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAAGTAAGCTCTAATTCTCTGTTTTCACTAAGCTCTGTTTCGCTATTATTTGCTCGCTCTTTCTATTGATTCCTGAATTTGATTTTCGAGTGATCGTTTCACAAACTCTTGAGATTTCGAATTTTGATTTTGATTTTTGATTGATCGCTTCGCAAACTCGAAATTTCGGATCTCTCTCCTCCGTTTTCTGAAAACTCATACGCTTCAAGTGATTTGATTTCCGTCTTCGATTTTATCAATCTGCTCGTTCAAGTTTAGCATCTTTTGGTTTTGAATTGTAAATTTCTCCTGTTTTCGTTTGTTTTTATCGTCTTCCTGAAAATGTGTGGGCCATCTGCTTGCTATATTTTGGTGCTTCCGTCGATCTCTCTAATTTTTGTGTATTTTTCTAAATGAATCGACAACTGTTACCTAGTTAAATGACAATATCGAACAAACTCGACTTTGAGCGTCTCGCTTTAACCTAACTCATATTACATTGATACTATATTTAGCGGCTCTCAATCATAGCTTGAATCCTTGCACCTCACGTAATACAATGTTACAGAAGAACAATAATAATGTGATGACGAGTTCTATTATTAGCATTATTCCAATACGTTATAATGTTTGCATCATGTTGAACCAACCAATTTTTTCATTACTAACAGTTAGTAAGGTCGAGTTTTGAATGTAATTTCGTAAAAGTTAAACTATAAATTTAGTCTTTCCAGTTTTTAAAAATTCACAAATAAAAATCTAGAGTTTCATCCTATTTTAACTTTATATTTTATAAATAAATTCTTTTTTAAATTTAATTTTTTCTAAACCATTACAATAAATCAATTCACAAATTTGATTGAAAATGTGAAAGAACAAATTCTAAAATTTTAAATATCAAATAAATTACAAATGATTTATAATTTAACATGTTTTAAAATTGAAATGGTAAGTGGAGTCTTCACTTTTTTCATCGTTTTTTTTTTGTCTGAAAGAGGACCAATAAAATAGAGTTTTTTTTTTCTTTTCTTTTTGGTAAGCTTCCGATAGTAAACGATTAAAAGGAGAAAGTTCAAGAAATAACTCATTATCCAGCCAAAATAAATAAATAAATATGTATATGTATATGTATGTATATATAAAAGGCACCAACCGTGCGTACCCCATGTTGTTTCTTTTGGATAATGATTTTGACAGCTAAACGAACATGCCGGTGCCTACTGCCTTGTGTGTTTACTTCTTTCTCCGTCTCTTTTCTAGAAGACTTTCCACCATGCACGCAACTGTGATTCTTGATAATGTAACTTGGAACACGTGTTGGTTGTTAAGAGAAACGTCGGTAGTTTTATGCATGTGATAGACATATCATCCATGTGCCGCCTTCTTGTAAAGCTGTAAACTTTGAAGACCGTAAAACTTTTACTGGTTATTAAATTAGCGTTATTTTCCTATAATTTTTTTTTAACAGTTAACTAGGTGCAACATGAAGGATTCGTATATTTGACCTTTTCTTCGAGAGTTTATACTTAAATTATTAACTTATTAGCTTCGATATACACTGTTTAGGAATGCACTTGGAATATGTAATATATGCTGGATCAACTGAAAATTTATGGAATTTCAGGGCTGAAAAATAATTCTAGAGATCGTTGTGATGTTCATTTTGCAGTTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCCGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTCACTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGATTGTATTTTCTTACTTTTGTTTATTTTTTAATTTCATTATTACGGGTTTTAATTTTACTGGGCGTTCAAGTATTAATACACAGGGTTAGATTATAGGTTTTATTTAGGATTTTCTACCCTCTTTTGTGCATTCA

mRNA sequence

ACTGGACTTCATATATCCCTCCTGCAGACCCAAAATATCTCTCAGTGGTTCTAGTTCGCTTCCAATTCACGAATCTCTAGAAGAATTAATGGAACAGAGGAAGTACGGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTTGATTATCAAAAATGGACAGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCCGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTCACTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGATTGTATTTTCTTACTTTTGTTTATTTTTTAATTTCATTATTACGGGTTTTAATTTTACTGGGCGTTCAAGTATTAATACACAGGGTTAGATTATAGGTTTTATTTAGGATTTTCTACCCTCTTTTGTGCATTCA

Coding sequence (CDS)

ATGGAACAGAGGAAGTACGGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTTGATTATCAAAAATGGACAGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCCGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTCACTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA

Protein sequence

MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE
Homology
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BLAST of Carg06862 vs. NCBI nr
Match: XP_022943355.1 (blue copper protein-like [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 1.5e-117
Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKY ADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNPVNDV DSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 239

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BLAST of Carg06862 vs. NCBI nr
Match: XP_023512118.1 (uncharacterized protein LOC111776932 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.9 bits (1086), Expect = 7.1e-115
Identity = 232/239 (97.07%), Postives = 233/239 (97.49%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKY ADLLSPAFLVLLLFL LSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV
Sbjct: 55  MEQRKYRADLLSPAFLVLLLFLFLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 114

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
           GKNFSLGDFLIFNTDNNHS+VLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV
Sbjct: 115 GKNFSLGDFLIFNTDNNHSIVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 174

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 175 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 234

Query: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNP NDV DSDKEVSGSVSLSLH KFNEFFFVL GIASACIFLCTE
Sbjct: 235 TESAPDTIVPSNFDNPQNDVADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE 293

[Close]
BLAST of Carg06862 vs. NCBI nr
Match: XP_022985667.1 (blue copper protein-like [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 4.0e-102
Identity = 217/239 (90.79%), Postives = 219/239 (91.63%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKY ADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDY+KWTV
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFT         XXXXXXXXXXXXXXXXXXXXX  V
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSG+YDGEQCQNGQQFKINVTHGQGLPKSMR   DEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR---DEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNP ND  DSDKEVSGSVSLSLH KFNEFFFVL GIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPQNDAADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE 236

[Close]
BLAST of Carg06862 vs. NCBI nr
Match: XP_022152980.1 (blue copper protein [Momordica charantia])

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 176/233 (75.54%), Postives = 186/233 (79.83%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQR Y AD L PAFL LLLFLSLSGRS VHAYKNYTVGDSLGWFDKLEKPAVDYQKW  
Sbjct: 1   MEQRNYRADPLQPAFL-LLLFLSLSGRSVVHAYKNYTVGDSLGWFDKLEKPAVDYQKWIA 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
           GKNF LGDFLIFNTDNNHSVV TYNFT YKLCD DD                     VTV
Sbjct: 61  GKNFGLGDFLIFNTDNNHSVVQTYNFTMYKLCDNDDASANDTTEWSAADPSATAPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAP-VVPDTGD 180
            VPL+KEG NYFFSG+YDGEQCQNGQ F+INVTHGQGLPKSMRDSSDEAP P V PDTGD
Sbjct: 121 PVPLIKEGINYFFSGNYDGEQCQNGQHFQINVTHGQGLPKSMRDSSDEAPGPAVAPDTGD 180

Query: 181 QTESAPDTIVPSNFDNPVNDVTDS-DKEVSGSVSLSLHSKFNEFFFVLAGIAS 232
           +TESAPDTI+PS+FD+P NDV D+ DKE SGSVSL LH KFN+ FF+L GIAS
Sbjct: 181 ETESAPDTIIPSSFDHPRNDVADTDDKEASGSVSLLLHFKFNDLFFLLVGIAS 232

[Close]
BLAST of Carg06862 vs. NCBI nr
Match: XP_004140182.1 (PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus] >KGN48076.1 hypothetical protein Csa_6G429060 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 169/237 (71.31%), Postives = 178/237 (75.11%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           ME RKY      PAFL LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQ+WT 
Sbjct: 1   MELRKY-----KPAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
           GK F LGDFLIFNTDNNHSVV TYN TTYKLCDYDD                     VTV
Sbjct: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSG+YDGEQCQNGQQF INVTHGQGLPKSMRD S+EAPAPVVPDTGDQ
Sbjct: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVTD--SDKEVSGSVSLSL--HSKFNEFFFVLAGIASAC 234
           T          +FDNP NDV D  +DKE SGS SLSL    KFNEF F+L GIASAC
Sbjct: 181 TXXXXXXXXXXSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 231

[Close]
BLAST of Carg06862 vs. TAIR10
Match: AT1G08500.1 (early nodulin-like protein 18)

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54
Identity = 112/215 (52.09%), Postives = 137/215 (63.72%), Query Frame = 0 

Query: 16  LVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTD 75
           ++ L+ LSLS      AYKNYTVG+S GWFD  E+P+ +YQKW   K+FSLGDFLIFNTD
Sbjct: 14  IMCLMLLSLS----ADAYKNYTVGESTGWFDIQERPSANYQKWADSKSFSLGDFLIFNTD 73

Query: 76  NNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTVAVPLLKEGTNYFFSG 135
           +NHSVV TY+F TYK CDYD+                     V+++VPL+KEG+NYFFSG
Sbjct: 74  SNHSVVQTYDFKTYKDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSG 133

Query: 136 HYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDN 195
           +YDGEQC+ GQ F INVTHGQGLP S       AP P         E APDTIVP+NFD+
Sbjct: 134 NYDGEQCKFGQHFMINVTHGQGLPDSSSPDDAAAPGPSESSQSGDDEVAPDTIVPANFDH 193

Query: 196 PVN-DVTDSDKEVSGSVSLSLHSKFNEFFFVLAGI 230
           P + +  D DKEV    S S  +K + F FV  G+
Sbjct: 194 PKDIESADDDKEVHSKKSSSSTTKTSLFCFVFMGL 224

[Close]
BLAST of Carg06862 vs. TAIR10
Match: AT5G15350.1 (early nodulin-like protein 17)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 0 

Query: 17 VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
          V+L FL  +    V A K YTVG++  W      P ++Y  W  GK+F LGD+L F  D 
Sbjct: 11 VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 77 NHSVVLTYNFTTYKLCDYD 96
          N   +L  N T Y+ C  D
Sbjct: 71 NQHNILEVNKTDYEGCIAD 83

[Close]
BLAST of Carg06862 vs. TAIR10
Match: AT3G17675.1 (Cupredoxin superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 6.6e-06
Identity = 34/117 (29.06%), Postives = 49/117 (41.88%), Query Frame = 0 

Query: 36  YTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYD 95
           + VGDS GW     +   +Y  WT G+ F +GD L+FN  ++   V+  N T Y  C  D
Sbjct: 9   HIVGDSNGW-----ELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLD 68

Query: 96  DXXXXXXXXXXXXXXXXXXXXXVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINV 153
           +                        ++ L + G  +F  G  D   C NGQ+  INV
Sbjct: 69  NYTTLFTKGND--------------SIILSEVGKLWFICGVDD--HCVNGQKLSINV 104

[Close]
BLAST of Carg06862 vs. TAIR10
Match: AT1G45063.1 (copper ion binding;electron carriers)

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 46/164 (28.05%), Postives = 63/164 (38.41%), Query Frame = 0 

Query: 17  VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
           V+++F  L G  +   YK   VGDS GW  K       Y  WT  K   +GD LIF  D+
Sbjct: 13  VIVIFTLLFGCCSATVYK---VGDSDGWTAKDHL----YYHWTEDKEIHVGDSLIFEYDH 72

Query: 77  N-HSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTVAVPLLKEGTNYFFSG 136
           N + V        Y+ CD                        VT   P    G+ YF + 
Sbjct: 73  NLNDVTQVSGGLEYEFCD----------SSFPKAVYNTGHDVVTFTEP----GSYYFITS 132

Query: 137 HYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGD 180
           ++   QC +GQ+  + V H    P  +   S   P+  V   GD
Sbjct: 133 NH--TQCTSGQRLGVFVVHDPSSPSPLPLPSKIIPSRHVYKVGD 153

[Close]
BLAST of Carg06862 vs. TAIR10
Match: AT5G07475.1 (Cupredoxin superfamily protein)

HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04
Identity = 21/45 (46.67%), Postives = 25/45 (55.56%), Query Frame = 0 

Query: 36 YTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSV 81
          Y VGDS GW       + D + WT GK FS GD L+F   + HSV
Sbjct: 30 YFVGDSSGW-----DISSDLESWTSGKRFSPGDVLMFQYSSTHSV 69

[Close]
BLAST of Carg06862 vs. Swiss-Prot
Match: sp|Q39131|LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 0 

Query: 17 VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
          V+L FL  +    V A K YTVG++  W      P ++Y  W  GK+F LGD+L F  D 
Sbjct: 11 VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 77 NHSVVLTYNFTTYKLCDYD 96
          N   +L  N T Y+ C  D
Sbjct: 71 NQHNILEVNKTDYEGCIAD 83

[Close]
BLAST of Carg06862 vs. TrEMBL
Match: tr|A0A0A0KJZ8|A0A0A0KJZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429060 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.4e-82
Identity = 169/237 (71.31%), Postives = 178/237 (75.11%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           ME RKY      PAFL LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQ+WT 
Sbjct: 1   MELRKY-----KPAFL-LLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTA 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
           GK F LGDFLIFNTDNNHSVV TYN TTYKLCDYDD                     VTV
Sbjct: 61  GKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYDDASDHDTTEWSAADPSATTPYPVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSG+YDGEQCQNGQQF INVTHGQGLPKSMRD S+EAPAPVVPDTGDQ
Sbjct: 121 AVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSMRDPSEEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVTD--SDKEVSGSVSLSL--HSKFNEFFFVLAGIASAC 234
           T          +FDNP NDV D  +DKE SGS SLSL    KFNEF F+L GIASAC
Sbjct: 181 TXXXXXXXXXXSFDNPRNDVADNNNDKESSGSNSLSLIYCFKFNEFLFLLVGIASAC 231

[Close]
BLAST of Carg06862 vs. TrEMBL
Match: tr|A0A1S3BN35|A0A1S3BN35_CUCME (cucumber peeling cupredoxin OS=Cucumis melo OX=3656 GN=LOC103491450 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.3e-80
Identity = 164/236 (69.49%), Postives = 172/236 (72.88%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVL-LLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWT 60
           ME RKY  D LSPAFL+L    LS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQKWT
Sbjct: 1   MELRKYKPDPLSPAFLLLXXXXLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  VGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVT 120
            GK F LGDFLIFNTDNNHSVV TYNFTTYKLCDYDD                     V 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGD 180
           VAVPL+KEG NYFFSG+YDGEQCQNGQQFKINVTHGQGLPKSM D SDEAPAPVVPDT  
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTXX 180

Query: 181 QTESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSL--HSKFNEFFFVLAGIASAC 234
                          NP NDV D+DKE S S S+SL    KFNEFFF+L GIASAC
Sbjct: 181 XXXXXXXXXXXXXXXNPRNDVADNDKESSSSNSISLVYCFKFNEFFFLLIGIASAC 236

[Close]
BLAST of Carg06862 vs. TrEMBL
Match: tr|A0A2N9FX74|A0A2N9FX74_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19730 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.6e-65
Identity = 134/221 (60.63%), Postives = 153/221 (69.23%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQ KY   LL    L  L  LS SG  +V AYKNYTVGDSLGWFDKLEKP V+YQKW  
Sbjct: 1   MEQGKYSLGLLLFFILSCLFLLSFSG--SVEAYKNYTVGDSLGWFDKLEKPNVNYQKWVA 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
            KNFSLGDFLIFN+DNNHSV+ TYN TTYKLCDY+D                     VTV
Sbjct: 61  AKNFSLGDFLIFNSDNNHSVIQTYNVTTYKLCDYEDAQDNDTIQWSSADPSATTPHPVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           +VPLLKEG  YFFS  YDGEQC+NGQ FKINVTHGQGLP+S+++  +E+P P+ P +GD+
Sbjct: 121 SVPLLKEGMVYFFSSDYDGEQCKNGQHFKINVTHGQGLPESLKNPPEESPGPISPTSGDE 180

Query: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNE 222
            ES PDTIVPSNF++P       DKE SGS SLS H K  +
Sbjct: 181 -ESTPDTIVPSNFNHP--QEASDDKEASGSDSLSKHWKLKD 216

[Close]
BLAST of Carg06862 vs. TrEMBL
Match: tr|A0A1R3KMG4|A0A1R3KMG4_9ROSI (Plastocyanin-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_06622 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.9e-65
Identity = 141/231 (61.04%), Postives = 162/231 (70.13%), Query Frame = 0 

Query: 11  LSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFL 70
           +S   L+LLLF SL    +V AYKNYTVGDSLGWFD LEKPAVD+QKW   KNFSLGDFL
Sbjct: 13  ISCLLLLLLLFCSL---GSVAAYKNYTVGDSLGWFDTLEKPAVDFQKWAATKNFSLGDFL 72

Query: 71  IFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTVAVPLLKEGTN 130
           IFNTDNNHS+V TYNFTTYKLCDY D                     VTVAVPLLKEG N
Sbjct: 73  IFNTDNNHSIVQTYNFTTYKLCDYGDALQNDTIEWSAADPSSTAPHPVTVAVPLLKEGMN 132

Query: 131 YFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVP 190
           YFFS  YDGEQCQNGQ F+INVTHGQGLPKS++D SD+APAP  PD G   ++APDTIVP
Sbjct: 133 YFFSSDYDGEQCQNGQHFQINVTHGQGLPKSLQDPSDDAPAPNSPDFGSD-DAAPDTIVP 192

Query: 191 SNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEF------FFVLAGIASACIF 236
           SNF++P+ + +D +++ S SVSL     FN F      F +L G+   CIF
Sbjct: 193 SNFNHPIEEESDKNED-SASVSL----LFNFFDRRLNGFLILLGV--VCIF 232

[Close]
BLAST of Carg06862 vs. TrEMBL
Match: tr|A0A1R3G5K3|A0A1R3G5K3_COCAP (Plastocyanin-like protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_28705 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.8e-64
Identity = 143/241 (59.34%), Postives = 164/241 (68.05%), Query Frame = 0 

Query: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQR     L + + LV  LF SL    +V AYKNYTVGDSLGWFD LE PAVDYQKW  
Sbjct: 2   MEQRSVVLKLFTVSCLV--LFCSL---GSVAAYKNYTVGDSLGWFDTLENPAVDYQKWAA 61

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDXXXXXXXXXXXXXXXXXXXXXVTV 120
            KNFSLGDFLIFNTDNNHS+V TYNFTTYKLCDY D                     VTV
Sbjct: 62  TKNFSLGDFLIFNTDNNHSIVQTYNFTTYKLCDYGDALQNDTIEWSAADPSSTAPHPVTV 121

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFS  YDGEQCQNGQ F+INVTHGQGLPKS++D SD+APAP  PD G  
Sbjct: 122 AVPLVKEGMNYFFSSDYDGEQCQNGQHFQINVTHGQGLPKSLQDPSDDAPAPNSPDFGSD 181

Query: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEF------FFVLAGIASACI 236
            ++APDTIVPSNF++P+ + +D +++ S SVSL     FN F      F +L G+   CI
Sbjct: 182 -DAAPDTIVPSNFNHPIEEESDKNED-SASVSL----LFNFFDRRLNGFLLLLGVV-VCI 230

The following BLAST results are available for this feature:
BLAST of Carg06862 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943355.11.5e-11799.16blue copper protein-like [Cucurbita moschata][more]
XP_023512118.17.1e-11597.07uncharacterized protein LOC111776932 [Cucurbita pepo subsp. pepo][more]
XP_022985667.14.0e-10290.79blue copper protein-like [Cucurbita maxima][more]
XP_022152980.11.6e-9075.54blue copper protein [Momordica charantia][more]
XP_004140182.12.1e-8271.31PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus] >KGN48076.1 hypoth... [more]
BLAST of Carg06862 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08500.11.7e-5452.09early nodulin-like protein 18[more]
AT5G15350.11.7e-0639.24early nodulin-like protein 17[more]
AT3G17675.16.6e-0629.06Cupredoxin superfamily protein[more]
AT1G45063.19.5e-0528.05copper ion binding;electron carriers[more]
AT5G07475.16.2e-0446.67Cupredoxin superfamily protein[more]
BLAST of Carg06862 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39131|LAML_ARATH3.1e-0539.24Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1[more]
BLAST of Carg06862 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJZ8|A0A0A0KJZ8_CUCSA1.4e-8271.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429060 PE=4 SV=1[more]
tr|A0A1S3BN35|A0A1S3BN35_CUCME1.3e-8069.49cucumber peeling cupredoxin OS=Cucumis melo OX=3656 GN=LOC103491450 PE=4 SV=1[more]
tr|A0A2N9FX74|A0A2N9FX74_FAGSY7.6e-6560.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19730 PE=4 SV=1[more]
tr|A0A1R3KMG4|A0A1R3KMG4_9ROSI9.9e-6561.04Plastocyanin-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_06622 PE=4 SV... [more]
tr|A0A1R3G5K3|A0A1R3G5K3_COCAP3.8e-6459.34Plastocyanin-like protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_28705 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR039391Phytocyanin
IPR008972Cupredoxin
IPR003245Phytocyanin_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06862-RACarg06862-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 44..146
e-value: 1.0E-19
score: 70.2
IPR003245Phytocyanin domainPROSITEPS51485PHYTOCYANINcoord: 34..154
score: 26.437
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 33..157
e-value: 1.0E-23
score: 85.4
IPR008972CupredoxinSUPERFAMILYSSF49503Cupredoxinscoord: 34..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..202
NoneNo IPR availablePANTHERPTHR33021:SF41EARLY NODULIN-LIKE PROTEIN 18coord: 12..211
NoneNo IPR availableCDDcd04216Phytocyanincoord: 34..152
e-value: 1.51966E-24
score: 93.4788
IPR039391PhytocyaninPANTHERPTHR33021FAMILY NOT NAMEDcoord: 12..211