CmaCh20G001180 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGGAATTGGTTTTAGTCCAATTTGGAAGTCCCTATTTTTGAAGTTTAAGGAGAAGGAAACTCTTTATTTGAAGATTTCTTGCATTTATTTTCTATTCGGTGCTACAGTTCTCCCACCCCCATCCTCCCCTCTTCAGGCCGTATGGATTCTCGTACGGAGGTAATGCGATAATATGTTCTTCCATTCATTTAGTTCAGATAATCACATCAGTTTCTTTCGATTTCCATCCTTTGTTTTGAAAAAACGAATTCATCGTTGTTTAGATTATGGTTTTCGTTGAATCTTGTTGAATCTTGGCCTTTCTTGTTTCGAAAATTTATTGTCTTAATTTAAGAGAATCGTTGCATTTCATTCTCGATTCCTGAGCAAAAGATCACCGTAATGGATACAAAACAATCAAGATCGCTAAAAATCGTGAGATGTGGAAGAGAAATATGATGAATCTATTTGAATATGAAACTGAAAGTTTGGTTGGTGTGTCTGTGTGTGTGTTTATACAGAATAGGTGGAAATCCGTTCCAGAATTTGGGGGGTGGGATAATAATACGCCTGATGCAAGCAATTATTCCGTTGTATTTTCTCGAGCTCGTGCCAATAAGAAACAGCAAAAGACCGATTTGACTGAGTTCAAAAGAGCCAGCCTAGGGAATGAAAAGGAGTTAATGGCCATCGCGGATAAACATGATCGCCACCACCAGCATCACCACCGTCGCGAACACCGACATCAACATCACCACCACCGCCACCACCCGCATCATGGTCAATTACCAGCGGATGGCGCTGTTGTCGGGGTAAGCACTTCTAATCGCTGAGTTATGTTCACTTTGATCTGTTCTTTTCCCACTTTAACCTCAAAATCCGATTGACCTAATTTGAACAAGAATTTAGTGTAGTTTTTGTTTGTGTAATCCAGCAGAAGAAAAAGAAGATTCTGTCCTGCATGAGTTGTTGTATCAAGCCTTGATATGAGATAAAGAAGGCAATCAACTTCGCTATGTTTTAGTGATATCATGCTGTTTTTCTGGATCTTCTTTGGCATGTGTAAATGTAGCGAGACATGTTCATCGTATGGAAAATAAATGCGTCAATTTCCCCTCCCTGAGTCTTTTTGTATAGGTTCTTTAGCTTATAAAACATGGAACCTTGTAATATATTCATTTCTTCATGGAGAAAACCAGATGAATACACTATGCAATAACATTATATTTTGTTCTTTTCGAAGTTGCTTTGGATCTACAGGGTGGACACAGCCCTTGCAATCTCTGATATTCTGTACATGTCAACTTTCCACCATTTGTTCAACCAGTTTCCACAGTCTATTTCTATGATAATTGAAGCTTTTTTAAGTTATAACATTTCTTTGTGTAATGTAGGCTAGTCTATGTCTATGCAACACGAACACCGACACAAACTCAACACACACAACACGGGCACGATGACGAACTCGAACTCAACACATGTAACACGGGCACGAACACGAACTCAACACACGTAACACGGATACAAACGACATGGGGCGCGGACAGTGAAGAATCTGGAGGGTGGCTGCAACCATGGGACGCGGACCATAAATGGGCTTCGATTAAATGGGTCGGTTCTGGGTTCATTATGAAAAACCCATAAAAGTAGAAATAAAAAAGTACGAAGAACCCAAAAAAAATCCATCCCGCCCTCTCTCTCTTCTCCTTCTCCTCGCCTCACGTATACAGCCGCCAGTCCTCCTCCATCTTCGGCGATCCTCCAGCGACAGACCCACGCTACTCTCTGGCGCCAACAGTGAACAGCGCAGCTCCGACCAGCAATCGCCGCTTCACCTACACGATCGACGACTGTTTGCTCCTCTTCACCCTCGCAGACGGCGACCCACTGCGCACGACGGTGCAACATCCTCCAGCACCGACAGCACGAGCTGCTCCACATTTGGAATTCTTCGGAGGACTAATCGTACTTAGATTTGAAGGCGAAGTTGGGTAAGAACTAGTTGGTAACACTACTGATTATCTTGTGTTAAATTAAGTTTCAGGATTTGTTTTATTGAAGTCGTTAATTTATGGAGATTTTTAGAAAAATATAGGATTTTCGAATCTCATTAGGAAACGTCTCTAG TAAAGGAATTGGTTTTAGTCCAATTTGGAAGTCCCTATTTTTGAAGTTTAAGGAGAAGGAAACTCTTTATTTGAAGATTTCTTGCATTTATTTTCTATTCGGTGCTACAGTTCTCCCACCCCCATCCTCCCCTCTTCAGGCCGTATGGATTCTCGTACGGAGAATAGGTGGAAATCCGTTCCAGAATTTGGGGGGTGGGATAATAATACGCCTGATGCAAGCAATTATTCCGTTGTATTTTCTCGAGCTCGTGCCAATAAGAAACAGCAAAAGACCGATTTGACTGAGTTCAAAAGAGCCAGCCTAGGGAATGAAAAGGAGTTAATGGCCATCGCGGATAAACATGATCGCCACCACCAGCATCACCACCGTCGCGAACACCGACATCAACATCACCACCACCGCCACCACCCGCATCATGGTCAATTACCAGCGGATGGCGCTGTTGTCGGGTCCTCCTCCATCTTCGGCGATCCTCCAGCGACAGACCCACGCTACTCTCTGGCGCCAACAGTGAACAGCGCAGCTCCGACCAGCAATCGCCGCTTCACCTACACGATCGACGACTGTTTGCTCCTCTTCACCCTCGCAGACGGCGACCCACTGCGCACGACGGTGCAACATCCTCCAGCACCGACAGCACGAGCTGCTCCACATTTGGAATTCTTCGGAGGACTAATCGTACTTAGATTTGAAGGCGAAGTTGGGAAACGTCTCTAG ATGGATTCTCGTACGGAGAATAGGTGGAAATCCGTTCCAGAATTTGGGGGGTGGGATAATAATACGCCTGATGCAAGCAATTATTCCGTTGTATTTTCTCGAGCTCGTGCCAATAAGAAACAGCAAAAGACCGATTTGACTGAGTTCAAAAGAGCCAGCCTAGGGAATGAAAAGGAGTTAATGGCCATCGCGGATAAACATGATCGCCACCACCAGCATCACCACCGTCGCGAACACCGACATCAACATCACCACCACCGCCACCACCCGCATCATGGTCAATTACCAGCGGATGGCGCTGTTGTCGGGTCCTCCTCCATCTTCGGCGATCCTCCAGCGACAGACCCACGCTACTCTCTGGCGCCAACAGTGAACAGCGCAGCTCCGACCAGCAATCGCCGCTTCACCTACACGATCGACGACTGTTTGCTCCTCTTCACCCTCGCAGACGGCGACCCACTGCGCACGACGGTGCAACATCCTCCAGCACCGACAGCACGAGCTGCTCCACATTTGGAATTCTTCGGAGGACTAATCGTACTTAGATTTGAAGGCGAAGTTGGGAAACGTCTCTAG MDSRTENRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAIADKHDRHHQHHHRREHRHQHHHHRHHPHHGQLPADGAVVGSSSIFGDPPATDPRYSLAPTVNSAAPTSNRRFTYTIDDCLLLFTLADGDPLRTTVQHPPAPTARAAPHLEFFGGLIVLRFEGEVGKRL
BLAST of CmaCh20G001180 vs. TrEMBL
Match: A0A0A0KK09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G430670 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.3e-25 Identity = 69/112 (61.61%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of CmaCh20G001180 vs. TrEMBL
Match: M5X647_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027227mg PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 1
BLAST of CmaCh20G001180 vs. TrEMBL
Match: W9RB51_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001258 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.9e-12 Identity = 36/52 (69.23%), Postives = 49/52 (94.23%), Query Frame = 1
BLAST of CmaCh20G001180 vs. TrEMBL
Match: I1MDY4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G055400 PE=4 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.1e-11 Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 1
BLAST of CmaCh20G001180 vs. TrEMBL
Match: K7M9T1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G055400 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.1e-11 Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 1
BLAST of CmaCh20G001180 vs. TAIR10
Match: AT5G19473.1 (AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 67.8 bits (164), Expect = 8.4e-12 Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 1
BLAST of CmaCh20G001180 vs. NCBI nr
Match: gi|778716881|ref|XP_011657609.1| (PREDICTED: protein catecholamines up [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 4.8e-25 Identity = 69/112 (61.61%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of CmaCh20G001180 vs. NCBI nr
Match: gi|659097471|ref|XP_008449644.1| (PREDICTED: forkhead box protein G1 isoform X2 [Cucumis melo]) HSP 1 Score: 121.3 bits (303), Expect = 1.8e-24 Identity = 66/102 (64.71%), Postives = 77/102 (75.49%), Query Frame = 1
BLAST of CmaCh20G001180 vs. NCBI nr
Match: gi|659097469|ref|XP_008449643.1| (PREDICTED: uncharacterized protein LOC103491464 isoform X1 [Cucumis melo]) HSP 1 Score: 120.6 bits (301), Expect = 3.1e-24 Identity = 76/142 (53.52%), Postives = 88/142 (61.97%), Query Frame = 1
BLAST of CmaCh20G001180 vs. NCBI nr
Match: gi|595886818|ref|XP_007213346.1| (hypothetical protein PRUPE_ppa027227mg, partial [Prunus persica]) HSP 1 Score: 87.8 bits (216), Expect = 2.2e-14 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 1
BLAST of CmaCh20G001180 vs. NCBI nr
Match: gi|645241848|ref|XP_008227272.1| (PREDICTED: uncharacterized protein LOC103326806 [Prunus mume]) HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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