CmaCh19G009810 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATACCGCACCAAAACCCAAATATGTTATGCTCTCCGACAACCACCAAGGCAGCCTCCGTCCTCCGCCCTACCGCCGTCACGTCCCGAGATACCATTCCAAGGCACAAGGCGGAGGCGGCGGCTGCGCTGGTTGTTGTTTGAAATGCATTTGTTGCTGTTACTGTTTCCTCTTATTCCTCATCTTTTCTCTGTTCGGCCTCGCCTATGTCCTCTTCTCATATTACAATCCCCAAATTCCTTCTTACGAAGTCTCTAGTTTCAATGTCCGTGTCTTCGACGTTAAGCCCGATTTCAGCCTCTACACCGAATTCATCGTCATCGTCACCGCCGACAACCCAAATCAAAACATCGACTTTGTCTACGGCAAAGGCAGCTATGTCTCTGTTCTCTACAATCAATCGGTGCTCTGCACCGGAGATATCCCCAATTTCCGACAGCCCTCCAAGAATGTCACCGACATAAGCATTTCCTTAACTGGGAATAGCGAATTTGGATCTGGGCTTCAAGAGGCGCTGATGCAGAACCGACACAGCGGCAGAATTCCTTTGCTGGTCGTGGTGAAAGTGCCGGTCACCATCGTTATTGGAAGGTTGTCGTTGAAGAAGGTTAATGTGTTCGTTAATTGTTCGTTGATCGTTGATAATTTGTCCCCCGACAAGAAGGTTGGGATTTTGTCGAGTAATTATACTTACGGTGCTGCCTTGTAAACTGTAAAGCACTGGGCATCATTTTACCCTTTCATTGCTCTCATCATTCTTAAATCTTTTTTCTATGTAAATACATTGTGTTTTTCACTTTCTTGTGATAGATGGGTGGAAAATAGGTAATTAAGAAGCACCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCTTTTTTTTTTTTTTTTTTTTTTTGTAAGTGCTATGATGTTCATTCTTTTGCTTCAATGTGTATCTTATAAAGATTACGAGGTTTTTTCATCTAAGATTCTCGCCCTATCCCTCTACATCGTGTCCAAATATGATCAAAGTTCGTAGCTTTATTGATATTTCTGTTAACCCTTTTGGCAAATTATGCATTTCCAATTCAAATATCTTATCGCAATTGAAGAGTTATATGTAACCGTCGGGCTGGCATATATTGTTTCTTGATCTTTTTAAGGAGTGTTTCGTTCTCCTCTACAATCAAGATGAGATTTTACAATTCACTCCCTTAGGGGTCGAGCGCTGGCACACTTAGGAGTGTCGGGCTCTGACACCATTTCCCACTCTGTGGAATCTGACAAGTTCTAAAAAAGATAGGCTTTTTTTTTTTTTGCAACGTTTAGTAAGCCTAGAATTTCGGCCAAGTCCATCCCACGTCCCCTCTCTGTGCTCTCTTTCTCTAAATTTTCAAACCCACTTCTGCTTAATAACTCCCAACAGTTATCATGAAATGATACTCAGTTTCACTGCCATGGTTCTCAAGTGTAAGTTCAGACATGTTTGGGATTCTGTTTGGGTGGAGAAAAGCTTCTAAATGGTGGGTTCATTGCTACATGTTCTTATTTTTTAAAGGATTTGATCTTTATTTGTGATTTGATACAGTAAGAAGCTGATCGAACAAGCTCTGTGCCGGCTTAAGATGCTCAAGAAGAAGAGATATTCAATTGCTAGGCAATTACGTGAAGATTTGTTTGAGCTGATTAGCAATGGCTATCAACAGATTGCCTTCAACAGGGTATGTCAAAACCCAATACTCTTGTGCGAGATACCATATTGGTTTGGTTGGAGACGTGAATGAACCATTCCTTTTAAGCATGAGAAAAGTCCAAAGAAAGACAATATCTGAGCCCCGGTGTTACAAATGGTGGACTTGGTGTTACAAATGGTATCAGAGCTAGACACCGGGTAGTGTGCCAGCGAAGACGTTGGACCTCCAAGGGGTGGAGAGGGAAACGAAGCATTCCTTGTAAGGGTGTAGAAACCTCTCCCTAACCGACACGTTTAAAGAAGCATTTCTTTTGATTATTTGTATATCAGGTGGAGCAGCTTGTTAGAGATGAAAGCTTGATGGAGGCATATGATTTGATTGAAAATTTCTGTGAGTTCATCCTGGTGAAGTTCTCCCATGTCAGGAAGAACAAGTAGGCCTGACTGTTACCATTTTTCAGGAGGTTTTGATCTGAGAAAAACATCCTTAAAAAATGTCTTTGTTGGTGGTTTCAGGACATGCCCAGATGATCTTATGGAAGCAATTTCAAGTCTCATATTTGCCTCTGCAAGATGTGGGGATTTTCCTGAGCTTAAACCGGTTCGAAAGTTCTTCGAGGAGCGTTACGGACAGCGTTTCGCCATGGCTGCTGTGGAATTGCATCCTGGAAACCTTGTGAATCCACAGGTATTAGAATCCTGGTCATAGATTGTTGTGTTTTGAATATTGAAACACTCATTACTTTCGTACAGATCAAAGAGAAGCTTGTAATGAAGGCTGTTTCAGATGATGAGAAGCAAAGATTGATGAACGAAATAGCTAGAGATTGCTTTCATCCAGCAATTCTGGCTCTTGAATACTGTCCAGATTGGTATCAGGAACATGGCTTAGACAGAACAAACAATCGCTTATCTTATGAAGTAACTATCGGTTATCTCATCGACAAACAGCAGCCCTGTTATGTTCATTCCGAGTGTAGAATGGATGATCATGTCGATTCTATTCAGTCTCCGACGATTAATCGTTTAGATTATGATTGGAACGACGAAATCGTTTTCGATTCGTATTCGATTGGAAGTATAGTTTATGATGTTTTTGTGTACCCTCATTGTCAGCCATATGAAAACAAGTATCCGAGGCACGTTCATCCGAAGCTGCCCGATTACGACGAAATCGCAGCGAAATTCATACAAATGAAGAGAGAATATGTGAAAAAGATGTGA ATGGATACCGCACCAAAACCCAAATATGTTATGCTCTCCGACAACCACCAAGGCAGCCTCCGTCCTCCGCCCTACCGCCGTCACGTCCCGAGATACCATTCCAAGGCACAAGGCGGAGGCGGCGGCTGCGCTGGTTGTTGTTTGAAATGCATTTGTTGCTGTTACTGTTTCCTCTTATTCCTCATCTTTTCTCTGTTCGGCCTCGCCTATGTCCTCTTCTCATATTACAATCCCCAAATTCCTTCTTACGAAGTCTCTAGTTTCAATGTCCGTGTCTTCGACGTTAAGCCCGATTTCAGCCTCTACACCGAATTCATCGTCATCGTCACCGCCGACAACCCAAATCAAAACATCGACTTTGTCTACGGCAAAGGCAGCTATGTCTCTGTTCTCTACAATCAATCGGTGCTCTGCACCGGAGATATCCCCAATTTCCGACAGCCCTCCAAGAATGTCACCGACATAAGCATTTCCTTAACTGGGAATAGCGAATTTGGATCTGGGCTTCAAGAGGCGCTGATGCAGAACCGACACAGCGGCAGAATTCCTTTGCTGGTCGTGGTGAAAGTGCCGGTCACCATCGTTATTGGAAGGTTGTCGTTGAAGAAGGTTAATGTGTTCGTTAATTGTTCGTTGATCGTTGATAATTTGTCCCCCGACAAGAAGGTTGGGATTTTGTCGAGTAATTATACTTACGGTGCTGCCTTTAAGAAGCTGATCGAACAAGCTCTGTGCCGGCTTAAGATGCTCAAGAAGAAGAGATATTCAATTGCTAGGCAATTACGTGAAGATTTGTTTGAGCTGATTAGCAATGGCTATCAACAGATTGCCTTCAACAGGGTGGAGCAGCTTGTTAGAGATGAAAGCTTGATGGAGGCATATGATTTGATTGAAAATTTCTGTGAGTTCATCCTGGTGAAGTTCTCCCATGTCAGGAAGAACAAGACATGCCCAGATGATCTTATGGAAGCAATTTCAAGTCTCATATTTGCCTCTGCAAGATGTGGGGATTTTCCTGAGCTTAAACCGGTTCGAAAGTTCTTCGAGGAGCGTTACGGACAGCGTTTCGCCATGGCTGCTGTGGAATTGCATCCTGGAAACCTTGTGAATCCACAGATCAAAGAGAAGCTTGTAATGAAGGCTGTTTCAGATGATGAGAAGCAAAGATTGATGAACGAAATAGCTAGAGATTGCTTTCATCCAGCAATTCTGGCTCTTGAATACTGTCCAGATTGGTATCAGGAACATGGCTTAGACAGAACAAACAATCGCTTATCTTATGAAGTAACTATCGGTTATCTCATCGACAAACAGCAGCCCTGTTATGTTCATTCCGAGTGTAGAATGGATGATCATGTCGATTCTATTCAGTCTCCGACGATTAATCGTTTAGATTATGATTGGAACGACGAAATCGTTTTCGATTCGTATTCGATTGGAAGTATAGTTTATGATGTTTTTGTGTACCCTCATTGTCAGCCATATGAAAACAAGTATCCGAGGCACGTTCATCCGAAGCTGCCCGATTACGACGAAATCGCAGCGAAATTCATACAAATGAAGAGAGAATATGTGAAAAAGATGTGA ATGGATACCGCACCAAAACCCAAATATGTTATGCTCTCCGACAACCACCAAGGCAGCCTCCGTCCTCCGCCCTACCGCCGTCACGTCCCGAGATACCATTCCAAGGCACAAGGCGGAGGCGGCGGCTGCGCTGGTTGTTGTTTGAAATGCATTTGTTGCTGTTACTGTTTCCTCTTATTCCTCATCTTTTCTCTGTTCGGCCTCGCCTATGTCCTCTTCTCATATTACAATCCCCAAATTCCTTCTTACGAAGTCTCTAGTTTCAATGTCCGTGTCTTCGACGTTAAGCCCGATTTCAGCCTCTACACCGAATTCATCGTCATCGTCACCGCCGACAACCCAAATCAAAACATCGACTTTGTCTACGGCAAAGGCAGCTATGTCTCTGTTCTCTACAATCAATCGGTGCTCTGCACCGGAGATATCCCCAATTTCCGACAGCCCTCCAAGAATGTCACCGACATAAGCATTTCCTTAACTGGGAATAGCGAATTTGGATCTGGGCTTCAAGAGGCGCTGATGCAGAACCGACACAGCGGCAGAATTCCTTTGCTGGTCGTGGTGAAAGTGCCGGTCACCATCGTTATTGGAAGGTTGTCGTTGAAGAAGGTTAATGTGTTCGTTAATTGTTCGTTGATCGTTGATAATTTGTCCCCCGACAAGAAGGTTGGGATTTTGTCGAGTAATTATACTTACGGTGCTGCCTTTAAGAAGCTGATCGAACAAGCTCTGTGCCGGCTTAAGATGCTCAAGAAGAAGAGATATTCAATTGCTAGGCAATTACGTGAAGATTTGTTTGAGCTGATTAGCAATGGCTATCAACAGATTGCCTTCAACAGGGTGGAGCAGCTTGTTAGAGATGAAAGCTTGATGGAGGCATATGATTTGATTGAAAATTTCTGTGAGTTCATCCTGGTGAAGTTCTCCCATGTCAGGAAGAACAAGACATGCCCAGATGATCTTATGGAAGCAATTTCAAGTCTCATATTTGCCTCTGCAAGATGTGGGGATTTTCCTGAGCTTAAACCGGTTCGAAAGTTCTTCGAGGAGCGTTACGGACAGCGTTTCGCCATGGCTGCTGTGGAATTGCATCCTGGAAACCTTGTGAATCCACAGATCAAAGAGAAGCTTGTAATGAAGGCTGTTTCAGATGATGAGAAGCAAAGATTGATGAACGAAATAGCTAGAGATTGCTTTCATCCAGCAATTCTGGCTCTTGAATACTGTCCAGATTGGTATCAGGAACATGGCTTAGACAGAACAAACAATCGCTTATCTTATGAAGTAACTATCGGTTATCTCATCGACAAACAGCAGCCCTGTTATGTTCATTCCGAGTGTAGAATGGATGATCATGTCGATTCTATTCAGTCTCCGACGATTAATCGTTTAGATTATGATTGGAACGACGAAATCGTTTTCGATTCGTATTCGATTGGAAGTATAGTTTATGATGTTTTTGTGTACCCTCATTGTCAGCCATATGAAAACAAGTATCCGAGGCACGTTCATCCGAAGCTGCCCGATTACGACGAAATCGCAGCGAAATTCATACAAATGAAGAGAGAATATGTGAAAAAGATGTGA MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAQGGGGGCAGCCLKCICCCYCFLLFLIFSLFGLAYVLFSYYNPQIPSYEVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGNSEFGSGLQEALMQNRHSGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSSNYTYGAAFKKLIEQALCRLKMLKKKRYSIARQLREDLFELISNGYQQIAFNRVEQLVRDESLMEAYDLIENFCEFILVKFSHVRKNKTCPDDLMEAISSLIFASARCGDFPELKPVRKFFEERYGQRFAMAAVELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDRTNNRLSYEVTIGYLIDKQQPCYVHSECRMDDHVDSIQSPTINRLDYDWNDEIVFDSYSIGSIVYDVFVYPHCQPYENKYPRHVHPKLPDYDEIAAKFIQMKREYVKKM
BLAST of CmaCh19G009810 vs. Swiss-Prot
Match: IST1_BOVIN (IST1 homolog OS=Bos taurus GN=IST1 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-12 Identity = 44/153 (28.76%), Postives = 88/153 (57.52%), Query Frame = 1
BLAST of CmaCh19G009810 vs. Swiss-Prot
Match: IST1_HUMAN (IST1 homolog OS=Homo sapiens GN=IST1 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-12 Identity = 44/153 (28.76%), Postives = 88/153 (57.52%), Query Frame = 1
BLAST of CmaCh19G009810 vs. Swiss-Prot
Match: IST1_MOUSE (IST1 homolog OS=Mus musculus GN=Ist1 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-12 Identity = 44/153 (28.76%), Postives = 88/153 (57.52%), Query Frame = 1
BLAST of CmaCh19G009810 vs. Swiss-Prot
Match: IST1_RAT (IST1 homolog OS=Rattus norvegicus GN=Ist1 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-12 Identity = 44/153 (28.76%), Postives = 88/153 (57.52%), Query Frame = 1
BLAST of CmaCh19G009810 vs. Swiss-Prot
Match: IST1L_DICDI (IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 5.7e-12 Identity = 42/141 (29.79%), Postives = 79/141 (56.03%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TrEMBL
Match: A0A0A0K2B4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047380 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 3.8e-103 Identity = 190/236 (80.51%), Postives = 209/236 (88.56%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TrEMBL
Match: A0A0A0K3R2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047390 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.7e-75 Identity = 141/182 (77.47%), Postives = 162/182 (89.01%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TrEMBL
Match: B9RW35_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1175710 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 5.1e-68 Identity = 134/228 (58.77%), Postives = 164/228 (71.93%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TrEMBL
Match: A0A059A096_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00959 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 6.9e-65 Identity = 130/223 (58.30%), Postives = 161/223 (72.20%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TrEMBL
Match: U5FEV5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s13360g PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.8e-63 Identity = 122/222 (54.95%), Postives = 163/222 (73.42%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TAIR10
Match: AT2G14830.1 (AT2G14830.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 163.7 bits (413), Expect = 3.1e-40 Identity = 78/180 (43.33%), Postives = 121/180 (67.22%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TAIR10
Match: AT1G54540.1 (AT1G54540.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-31 Identity = 69/188 (36.70%), Postives = 114/188 (60.64%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TAIR10
Match: AT1G51900.1 (AT1G51900.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 124.0 bits (310), Expect = 2.7e-28 Identity = 70/175 (40.00%), Postives = 108/175 (61.71%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TAIR10
Match: AT4G35730.1 (AT4G35730.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 123.2 bits (308), Expect = 4.6e-28 Identity = 59/161 (36.65%), Postives = 100/161 (62.11%), Query Frame = 1
BLAST of CmaCh19G009810 vs. TAIR10
Match: AT1G25420.1 (AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein) HSP 1 Score: 121.3 bits (303), Expect = 1.8e-27 Identity = 60/166 (36.14%), Postives = 101/166 (60.84%), Query Frame = 1
BLAST of CmaCh19G009810 vs. NCBI nr
Match: gi|778724056|ref|XP_011658744.1| (PREDICTED: uncharacterized protein LOC105436081 [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 5.4e-103 Identity = 190/236 (80.51%), Postives = 209/236 (88.56%), Query Frame = 1
BLAST of CmaCh19G009810 vs. NCBI nr
Match: gi|659110639|ref|XP_008455332.1| (PREDICTED: uncharacterized protein LOC103495521 [Cucumis melo]) HSP 1 Score: 379.4 bits (973), Expect = 1.0e-101 Identity = 190/238 (79.83%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of CmaCh19G009810 vs. NCBI nr
Match: gi|700188371|gb|KGN43604.1| (hypothetical protein Csa_7G047390 [Cucumis sativus]) HSP 1 Score: 290.0 bits (741), Expect = 8.1e-75 Identity = 141/182 (77.47%), Postives = 162/182 (89.01%), Query Frame = 1
BLAST of CmaCh19G009810 vs. NCBI nr
Match: gi|778730128|ref|XP_011659706.1| (PREDICTED: uncharacterized protein LOC105436231 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 1.7e-72 Identity = 141/191 (73.82%), Postives = 162/191 (84.82%), Query Frame = 1
BLAST of CmaCh19G009810 vs. NCBI nr
Match: gi|659111029|ref|XP_008455540.1| (PREDICTED: uncharacterized protein LOC103495691 [Cucumis melo]) HSP 1 Score: 280.8 bits (717), Expect = 4.9e-72 Identity = 142/182 (78.02%), Postives = 161/182 (88.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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