CmaCh19G007750 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAGAAGGATAGATTTTACAAGGTGAAGAGGTGAAAGGTGACAACTTTATGGCCCAACATTCAAGTTTTGAAAATTCTATCGAACATCAAAACGGTCAAGCAGTTGCTGTCTTTGACGATGCGGACTCTACTTTCTATTACAAGTGTAGGTTCCTTAATTTCCAAGACACCTTATATTCAAAGGGACGACCAGTTTTTTAAGGAGTGCGACATCTATGGAAATATAGACTTTATTTTTAGAGATGGACTTGTTACGTTTCAAGACTGTAACATATATATTCGGTTACCGAGCAATGAAACCACAGTCACGACGCAGTCCAAGAAACCTTTGTTGAAAAACTGCTTCTCATTACAAAACCAAATATCATAA ATGAAAAAGAAGGATAGATTTTACAAGGTGACAACTTTATGGCCCAACATTCAAGTTTTGAAAATTCTATCGAACATCAAAACGGTCAAGCAGTTGCTGTCTTTGACGATGCGGACTCTACTTTCTATTACAAGTGTAGGTTCCTTAATTTCCAAGACACCTTATATTCAAAGGGACGACCAGTTTTTTAAGGAGTGCGACATCTATGGAAATATAGACTTTATTTTTAGAGATGGACTTGTTACGTTTCAAGACTGTAACATATATATTCGGTTACCGAGCAATGAAACCACAGTCACGACGCAGTCCAAGAAACCTTTGTTGAAAAACTGCTTCTCATTACAAAACCAAATATCATAA ATGAAAAAGAAGGATAGATTTTACAAGGTGACAACTTTATGGCCCAACATTCAAGTTTTGAAAATTCTATCGAACATCAAAACGGTCAAGCAGTTGCTGTCTTTGACGATGCGGACTCTACTTTCTATTACAAGTGTAGGTTCCTTAATTTCCAAGACACCTTATATTCAAAGGGACGACCAGTTTTTTAAGGAGTGCGACATCTATGGAAATATAGACTTTATTTTTAGAGATGGACTTGTTACGTTTCAAGACTGTAACATATATATTCGGTTACCGAGCAATGAAACCACAGTCACGACGCAGTCCAAGAAACCTTTGTTGAAAAACTGCTTCTCATTACAAAACCAAATATCATAA MKKKDRFYKVTTLWPNIQVLKILSNIKTVKQLLSLTMRTLLSITSVGSLISKTPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQNQIS
BLAST of CmaCh19G007750 vs. Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.3e-08 Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 1
BLAST of CmaCh19G007750 vs. Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmaCh19G007750 vs. Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 9.6e-08 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmaCh19G007750 vs. Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.8e-07 Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 1
BLAST of CmaCh19G007750 vs. Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.8e-07 Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TrEMBL
Match: A0A0A0L1M3_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_4G260430 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09 Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TrEMBL
Match: A0A0A0LR14_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G049450 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.6e-09 Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TrEMBL
Match: A0A118JT55_CYNCS (Pectinesterase OS=Cynara cardunculus var. scolymus GN=Ccrd_008814 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.7e-08 Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TrEMBL
Match: A0A0B0P3D3_GOSAR (Pectinesterase OS=Gossypium arboreum GN=F383_07269 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.7e-08 Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TrEMBL
Match: A0A068V664_COFCA (Pectinesterase OS=Coffea canephora GN=GSCOC_T00016998001 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TAIR10
Match: AT3G49220.1 (AT3G49220.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TAIR10
Match: AT5G53370.1 (AT5G53370.1 pectin methylesterase PCR fragment F) HSP 1 Score: 57.8 bits (138), Expect = 5.4e-09 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TAIR10
Match: AT4G02320.1 (AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08 Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TAIR10
Match: AT2G45220.1 (AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08 Identity = 22/53 (41.51%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of CmaCh19G007750 vs. TAIR10
Match: AT3G05620.1 (AT3G05620.1 Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08 Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 1
BLAST of CmaCh19G007750 vs. NCBI nr
Match: gi|778708428|ref|XP_011656190.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Cucumis sativus]) HSP 1 Score: 82.4 bits (202), Expect = 5.8e-13 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 1
BLAST of CmaCh19G007750 vs. NCBI nr
Match: gi|659068775|ref|XP_008446163.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 39 [Cucumis melo]) HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10 Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 1
BLAST of CmaCh19G007750 vs. NCBI nr
Match: gi|659068777|ref|XP_008446175.1| (PREDICTED: pectinesterase 2-like [Cucumis melo]) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-10 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 1
BLAST of CmaCh19G007750 vs. NCBI nr
Match: gi|659131264|ref|XP_008465596.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 47, partial [Cucumis melo]) HSP 1 Score: 72.4 bits (176), Expect = 6.0e-10 Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of CmaCh19G007750 vs. NCBI nr
Match: gi|659131231|ref|XP_008465578.1| (PREDICTED: pectinesterase 2-like, partial [Cucumis melo]) HSP 1 Score: 72.4 bits (176), Expect = 6.0e-10 Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |