CmaCh19G005830 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G005830
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionADP-ribosylation factor family protein
LocationCma_Chr19 : 6490802 .. 6494211 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCATTGATATTCATCTTCAATCGTTGTAATATGCTCGAGTGCGAACAACGGGCAACCAATAGAAACTTCGTTCACAAAAATGTCTCCTACCAACATCAATGAGTCAATGACTGTTTTCAGCTTTCCTGTAATGAAAAGGCCATCATTCTTGTGCATAATATTAATGAGTCAATGGCTACTTGGAGGAGACCCTTTGTTGCCCAAGATCAATATATAACGTGTCTTCGTTTAAAGAGCTGGGCCACAGTTTGTGTTTCAGTAGAAGATAAGTGCTTTATATTGCTTTCTAAAGTAGTTCAATATATTCCTTTCAGATATGAAGAGAGCTTCTCCATCAGTCTAAGTAAGTTCATTCACTCTGGCAAACAAATATACTTGAAGGAGAGACAAAGAGCTTTATTGCCTTCTGTCCCAAAGAATCAATTCTCTTTCAGCCTTTACATGTAGAAGTTTTTGGTCTAATATTCACTTGGAAGACAAGGTATCTCTCATGCCATCTCCCTGTAAACTGATGCTTTGGCTTTGTCTTTTTCAGTTGGCCTTACTTTCTCCCACAGAACTAAGATCTGGTGCACTTGCACTGAAAATTTTGCCATCATCTTTATATTCCTTGTATACTGCAGCATGGGTGCAGTGATAACCAGGTTGAGGAAGCGACTCTTCCAGAACCGTGAAGTGAGAATCCTGATGGTCGGTCTTGATGCATCGGGGAAGACAACCATTTTGTACAAACTAAAACTTGGTGAAGTTGTTATGACCGTACCAACTATTGGTATGCTCTCTGATCATTTATTTATTTATATATTCTGGATAGGATTTTACTCTGAAAACCTATCTTTATTTCCCCACATTTTTTGACAAATAAATTGGTTTGAGATAAAATGGATATTAGCCCGTGTTATTATTTAGTTTTTTCTTAAAATTATTTTCAAGAATAGTTTTATTAGAAAATTTTGATCCTGCTTTTTCTCTTTTGAAATTTGGTTCGATAATGTGCATGTCTTGGACAAAATGGAGAATATATACTTTTGTTTGTATTCTTTAGCTACATATTACAACTTTATGGAGTATTTTCCTTATTTTACCCTTTATATATATTAATAATTACTTAGTTTTGATAATAATAATTTTCAATTATTTTATTTGTACAAAATAGTTTTGTTTACTAGCAATTTGTAATATTACTATTTCAACTAATTGTTTTCTTGAGAATTTTTGTTTTAATTTTTTTTTTCAAGTATTCTACTACTATCAACCTGGAGTGTGTGAAATTGAAAAGAAGACTTCTGCAAAATAATTGTTGGACAGTTTTTTTCATAGTTGCATTTTATGATCCAGGGTTCAATGTGGAAACATTAGAATACAAAAACATTAGCTGCTCTGTCTGGGACGTCGGAGGACAAGATAAGGTTTGAAATCACACCCTCTCACTCTGCTTCTGCTAATACTTTAATTCTATTGCAATCTGAAAAATTAAAGAACATATGCCTCAAAATTTATGTTAAGGAAATTGCAACAATAATGGTCAAAACATATGCTCGTGAAAGTTCTAAAACTAGAACATAACATTTCAAATAACACTGTCAAAAATTTAATGTGTAGGAAAGTTTTAAGTGCAAAAATATTTCTTTGTTGTTTATTGTACTAGTGGTTTGAAATTAAAAAAATAAATAAGATGAATATAACTTATCTAGATATATTTCCAATTGGTTTTAGTGGTAAAAATAGCTTTGAAAGCAATTTGAGTTAGGATTATCATAATTTGAACTTCATTTGTTATTCATATATATATATATATATATATATATATTAAAATTTTAAATTAAATGTAAAAATGTACCATAAAATCTAGTTCGAATCTTAATTAAATATTTAAAAATAAATAAATAAATATTTTTTTATATGACCATTTTACTTTTATCGAAACAAAAATTTGACTAAATGACTTAAACAATCGAACAAATACAACCCAATATTTAGTGATTGAGTCTAGTTGAGTTCATTATTTAATAAATATTACTGAAGTTGAATTAAGTTGGGTATAATAAATATTTCAACTTATCCCTGCTACATGTTAATTTGATTATTTAGATAGTTCTGGTGATAAAACTATATTTATTGGACTGGGAACAAAATATTTAATTTGTTTTGAACCAAACAGATAAGGCCATTATGGAGGCATTACTTCCAGAACACACAAGGACTTGTATATGTTGTGGACAGCGGTGACAGAGGGAGAATCTGTGAAGCCAGGAATGAGTTGCATCGCATTCTCAGTGAGGTATAGCACTCAACCTTCACTATGTTTAGGTATGTTCTTATGCTTGTTGAGATGATTTTAAGATGCCAAAAGAAAAAGAAAATGACAGCCAGAGCTAAGGAATGCAGCTGTGCTTGTGTTTGCTAACAAGCAAGATCTTCCACAATCAATGGCTGTGTCTGAAATTGCAAATAAACTTGGTCTCCAAACCCTCTCTCAAAGAAGATGGTACGCAAGTTCTTTTGTTCTGTTGAGAAATATCTGGGAAGAATATGCACTTTTGAATCTGTTCTGAAATCATGGTTTACAACAATTTTCTGTTTGTTAAAAGAATGTTTTTAAGTTGGAAACTTGTTTTGTTGATTTTTTTTCCAAAAGATTTTTAATTTTTTAAAATGTTTTAATTTGGTTAAATCTTTTGTGTACCATTTAAATTTTTAATTTTTTGTGTCTGATTTATTTTGAGATTATATTTTACAAGCGTCAATTTTAGAAAAAAAATTCAGCTGTAACTTAGCTTAATTATGTACGTACTTTCCTCCATTTTTATCTTGATTTCTTTGCATGATAGTATTTTAGGATTAGACAAATAAATCCTAGTTTTTTCGATTGGTCCTAGACATCGTGTTTACCTAATTAGTTCATAATTTTTTTAAAAAATATCATATTTGAAGATAAATTAAAACCTTAATAATTATAAAAATTAAAAGTTTAAGAATTTATTGAATATTTTTTAAATTTCAAGAATTTATTAGATATAAATAAAGTTATTCACTAAATATGTAATTAAAAAACGAAGATTAATATATCGAAAAATTGATGTATATATATATATATGTATATATTGCTTTTTAAAGGTACATACAAGGTACGTCTGCAACTTCTGGGCAAGGGCTGTATGAGGGTTTTGATTGGCTATGCAACAACATTATCATCAAAGACTCTCCATGATGCTTTATACTTTACTAGTAATATTAGTTTGAATTCTCCAATTCATTAAGAGGTGATGAATATATGTGAAAATACCACTTTATCAATTGAGTATTTTTAAAAGATCAAATCAAAATCATAGAAACTGTTGAGGTTTTCACTTCATCATTGTCGTATTCATTTGATATTCTTGAGGTTTAGTGTGTTTAGTGCC

mRNA sequence

ATGATTCCATTGATATTCATCTTCAATCGTTGTAATATGCTCGAGTGCGAACAACGGGCAACCAATAGAAACTTCGTTCACAAAAATCCTTTACATGTAGAAGTTTTTGGTCTAATATTCACTTGGAAGACAAGCATGGGTGCAGTGATAACCAGGTTGAGGAAGCGACTCTTCCAGAACCGTGAAGTGAGAATCCTGATGGTCGGTCTTGATGCATCGGGGAAGACAACCATTTTGTACAAACTAAAACTTGGTGAAGTTGTTATGACCGTACCAACTATTGGGTTCAATGTGGAAACATTAGAATACAAAAACATTAGCTGCTCTGTCTGGGACGTCGGAGGACAAGATAAGATAAGGCCATTATGGAGGCATTACTTCCAGAACACACAAGGACTTGTATATGTTGTGGACAGCGGTGACAGAGGGAGAATCTGTGAAGCCAGGAATGAGTTGCATCGCATTCTCAGTGAGCCAGAGCTAAGGAATGCAGCTGTGCTTGTGTTTGCTAACAAGCAAGATCTTCCACAATCAATGGCTGTGTCTGAAATTGCAAATAAACTTGGTCTCCAAACCCTCTCTCAAAGAAGATGGTACATACAAGGTACGTCTGCAACTTCTGGGCAAGGGCTGTATGAGGGTTTTGATTGGCTATGCAACAACATTATCATCAAAGACTCTCCATGATGCTTTATACTTTACTAGTAATATTAGTTTGAATTCTCCAATTCATTAAGAGGTGATGAATATATGTGAAAATACCACTTTATCAATTGAGTATTTTTAAAAGATCAAATCAAAATCATAGAAACTGTTGAGGTTTTCACTTCATCATTGTCGTATTCATTTGATATTCTTGAGGTTTAGTGTGTTTAGTGCC

Coding sequence (CDS)

ATGATTCCATTGATATTCATCTTCAATCGTTGTAATATGCTCGAGTGCGAACAACGGGCAACCAATAGAAACTTCGTTCACAAAAATCCTTTACATGTAGAAGTTTTTGGTCTAATATTCACTTGGAAGACAAGCATGGGTGCAGTGATAACCAGGTTGAGGAAGCGACTCTTCCAGAACCGTGAAGTGAGAATCCTGATGGTCGGTCTTGATGCATCGGGGAAGACAACCATTTTGTACAAACTAAAACTTGGTGAAGTTGTTATGACCGTACCAACTATTGGGTTCAATGTGGAAACATTAGAATACAAAAACATTAGCTGCTCTGTCTGGGACGTCGGAGGACAAGATAAGATAAGGCCATTATGGAGGCATTACTTCCAGAACACACAAGGACTTGTATATGTTGTGGACAGCGGTGACAGAGGGAGAATCTGTGAAGCCAGGAATGAGTTGCATCGCATTCTCAGTGAGCCAGAGCTAAGGAATGCAGCTGTGCTTGTGTTTGCTAACAAGCAAGATCTTCCACAATCAATGGCTGTGTCTGAAATTGCAAATAAACTTGGTCTCCAAACCCTCTCTCAAAGAAGATGGTACATACAAGGTACGTCTGCAACTTCTGGGCAAGGGCTGTATGAGGGTTTTGATTGGCTATGCAACAACATTATCATCAAAGACTCTCCATGA

Protein sequence

MIPLIFIFNRCNMLECEQRATNRNFVHKNPLHVEVFGLIFTWKTSMGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKNISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAAVLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIKDSP
Homology
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BLAST of CmaCh19G005830 vs. Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 281.2 bits (718), Expect = 1.0e-74
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   T+L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

[Close]
BLAST of CmaCh19G005830 vs. Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-74
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   T+L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

[Close]
BLAST of CmaCh19G005830 vs. Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-74
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   T+L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

[Close]
BLAST of CmaCh19G005830 vs. Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 279.6 bits (714), Expect = 3.0e-74
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   T+L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSK 180

[Close]
BLAST of CmaCh19G005830 vs. Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 279.3 bits (713), Expect = 3.9e-74
Identity = 131/180 (72.78%), Postives = 153/180 (85.00%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   T+L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG +WL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASK 180

[Close]
BLAST of CmaCh19G005830 vs. TrEMBL
Match: A0A0A0K7V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072830 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.2e-90
Identity = 165/182 (90.66%), Postives = 173/182 (95.05%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MGAVI+RLRKRLFQNREVRILM+GLDASGKTTILYKLKLGE+VMTVPTIGFNVET+EYKN
Sbjct: 1   MGAVISRLRKRLFQNREVRILMLGLDASGKTTILYKLKLGEIVMTVPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +SCSVWDVGGQDKIRPLWRHYFQNTQGLV+VVDS DRGRICEARNELHRILSE ELRNAA
Sbjct: 61  MSCSVWDVGGQDKIRPLWRHYFQNTQGLVFVVDSVDRGRICEARNELHRILSEAELRNAA 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           VLVFANKQDLP SM VSEI  KLGL TLSQRRWYIQGTSATSGQGLYEGFDWLCNNI + 
Sbjct: 121 VLVFANKQDLPHSMTVSEITTKLGLHTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIWLC 180

Query: 226 DS 228
           +S
Sbjct: 181 NS 182

[Close]
BLAST of CmaCh19G005830 vs. TrEMBL
Match: A5BCP0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038875 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75
Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG VI+RL K LF  RE+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLVISRLLKMLFAKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +S +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR RI EA++ELHR+LSE ELR+A 
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERILEAKDELHRMLSEDELRDAT 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M+VSEI +K+GL +L QRRWYIQ T ATSGQGLYEG DWL +NI  K
Sbjct: 121 LLVFANKQDLPNAMSVSEITDKMGLHSLRQRRWYIQSTCATSGQGLYEGLDWLSSNISSK 180

[Close]
BLAST of CmaCh19G005830 vs. TrEMBL
Match: A0A067KAE8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12454 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.1e-74
Identity = 136/180 (75.56%), Postives = 156/180 (86.67%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG  I+RL K LF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLAISRLMKMLFARKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +S +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR RI EAR+ELHR+LSE ELR++ 
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERITEARDELHRMLSEDELRDST 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M VSEI +KLGL +L QRRWYIQ T ATSGQGLYEG DWL +NI  K
Sbjct: 121 LLVFANKQDLPNAMTVSEITDKLGLHSLRQRRWYIQATCATSGQGLYEGLDWLSSNISSK 180

[Close]
BLAST of CmaCh19G005830 vs. TrEMBL
Match: M5WK44_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012138mg PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.9e-74
Identity = 135/180 (75.00%), Postives = 155/180 (86.11%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG  I+R+ K LF  +E+RILMVGLDA+GKTTILYKLKLGEVV T+PTIGFNVET+EYKN
Sbjct: 1   MGMAISRMVKMLFARKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +S +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+LSE ELR A 
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVSEARDELHRMLSEDELREAT 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M+VSEI +KLGL +L QRRWYIQ   ATSGQGLYEG DWL +NI  K
Sbjct: 121 LLVFANKQDLPNAMSVSEITDKLGLHSLRQRRWYIQAACATSGQGLYEGLDWLSSNISSK 180

[Close]
BLAST of CmaCh19G005830 vs. TrEMBL
Match: M0SMP2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.9e-74
Identity = 134/180 (74.44%), Postives = 154/180 (85.56%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   TRL  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLTFTRLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR RI EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIIEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI+ K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIVSK 180

[Close]
BLAST of CmaCh19G005830 vs. TAIR10
Match: AT5G14670.1 (AT5G14670.1 ADP-ribosylation factor A1B)

HSP 1 Score: 280.8 bits (717), Expect = 7.5e-76
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG   T+L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIATK 180

[Close]
BLAST of CmaCh19G005830 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 278.9 bits (712), Expect = 2.9e-75
Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG    +L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

[Close]
BLAST of CmaCh19G005830 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 278.1 bits (710), Expect = 4.9e-75
Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG    +L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

[Close]
BLAST of CmaCh19G005830 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-75
Identity = 130/177 (73.45%), Postives = 151/177 (85.31%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG    +L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNI 223
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

[Close]
BLAST of CmaCh19G005830 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-75
Identity = 130/177 (73.45%), Postives = 151/177 (85.31%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG    +L  RLF  +E+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           IS +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR R+ EAR+ELHR+L+E ELR+A 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNI 223
           +LVFANKQDLP +M  +EI +KLGL +L QR WYIQ T ATSG+GLYEG DWL NNI
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

[Close]
BLAST of CmaCh19G005830 vs. NCBI nr
Match: gi|778730201|ref|XP_011659724.1| (PREDICTED: ADP-ribosylation factor 1-like [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 1.0e-90
Identity = 165/189 (87.30%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 39  IFTWKTSMGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNV 98
           +++  + MGAVI+RLRKRLFQNREVRILM+GLDASGKTTILYKLKLGE+VMTVPTIGFNV
Sbjct: 159 LYSLISDMGAVISRLRKRLFQNREVRILMLGLDASGKTTILYKLKLGEIVMTVPTIGFNV 218

Query: 99  ETLEYKNISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSE 158
           ET+EYKN+SCSVWDVGGQDKIRPLWRHYFQNTQGLV+VVDS DRGRICEARNELHRILSE
Sbjct: 219 ETVEYKNMSCSVWDVGGQDKIRPLWRHYFQNTQGLVFVVDSVDRGRICEARNELHRILSE 278

Query: 159 PELRNAAVLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWL 218
            ELRNAAVLVFANKQDLP SM VSEI  KLGL TLSQRRWYIQGTSATSGQGLYEGFDWL
Sbjct: 279 AELRNAAVLVFANKQDLPHSMTVSEITTKLGLHTLSQRRWYIQGTSATSGQGLYEGFDWL 338

Query: 219 CNNIIIKDS 228
           CNNI + +S
Sbjct: 339 CNNIWLCNS 347

[Close]
BLAST of CmaCh19G005830 vs. NCBI nr
Match: gi|700188663|gb|KGN43896.1| (hypothetical protein Csa_7G072830 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.7e-90
Identity = 165/182 (90.66%), Postives = 173/182 (95.05%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MGAVI+RLRKRLFQNREVRILM+GLDASGKTTILYKLKLGE+VMTVPTIGFNVET+EYKN
Sbjct: 1   MGAVISRLRKRLFQNREVRILMLGLDASGKTTILYKLKLGEIVMTVPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +SCSVWDVGGQDKIRPLWRHYFQNTQGLV+VVDS DRGRICEARNELHRILSE ELRNAA
Sbjct: 61  MSCSVWDVGGQDKIRPLWRHYFQNTQGLVFVVDSVDRGRICEARNELHRILSEAELRNAA 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           VLVFANKQDLP SM VSEI  KLGL TLSQRRWYIQGTSATSGQGLYEGFDWLCNNI + 
Sbjct: 121 VLVFANKQDLPHSMTVSEITTKLGLHTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIWLC 180

Query: 226 DS 228
           +S
Sbjct: 181 NS 182

[Close]
BLAST of CmaCh19G005830 vs. NCBI nr
Match: gi|659109994|ref|XP_008454992.1| (PREDICTED: ADP-ribosylation factor 1-like [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 3.9e-90
Identity = 163/177 (92.09%), Postives = 170/177 (96.05%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MGAVI+RLRKRL QNREVRILM+GLDASGKTTILYKLKLGE+VMTVPTIGFNVET+EYKN
Sbjct: 1   MGAVISRLRKRLLQNREVRILMLGLDASGKTTILYKLKLGEIVMTVPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +SCSVWDVGGQDKIRPLWRHYFQNTQGLV+VVDSGDRGRICEARNELHRILSE ELRNAA
Sbjct: 61  MSCSVWDVGGQDKIRPLWRHYFQNTQGLVFVVDSGDRGRICEARNELHRILSEAELRNAA 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNI 223
           VLVFANKQDLP SM +SEI  KLGL TLSQRRWYIQGTSATSGQGLYEGFDWLCNNI
Sbjct: 121 VLVFANKQDLPHSMTLSEITTKLGLHTLSQRRWYIQGTSATSGQGLYEGFDWLCNNI 177

[Close]
BLAST of CmaCh19G005830 vs. NCBI nr
Match: gi|296087398|emb|CBI33772.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 290.8 bits (743), Expect = 2.1e-75
Identity = 139/190 (73.16%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 36  FGLIFTWKTSMGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIG 95
           F L+  +K  MG VI+RL K LF  RE+RILMVGLDA+GKTTILYKLKLGE+V T+PTIG
Sbjct: 20  FFLLLFFKEDMGLVISRLLKMLFAKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 79

Query: 96  FNVETLEYKNISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRI 155
           FNVET+EYKN+S +VWDVGGQ KIRPLWRHYFQNTQGL++VVDS DR RI EA++ELHR+
Sbjct: 80  FNVETVEYKNVSFTVWDVGGQHKIRPLWRHYFQNTQGLIFVVDSNDRERILEAKDELHRM 139

Query: 156 LSEPELRNAAVLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGF 215
           LSE ELR+A +LVFANKQDLP +M+VSEI +K+GL +L QRRWYIQ T ATSGQGLYEG 
Sbjct: 140 LSEDELRDATLLVFANKQDLPNAMSVSEITDKMGLHSLRQRRWYIQSTCATSGQGLYEGL 199

Query: 216 DWLCNNIIIK 226
           DWL +NI  K
Sbjct: 200 DWLSSNISSK 209

[Close]
BLAST of CmaCh19G005830 vs. NCBI nr
Match: gi|147810961|emb|CAN59803.1| (hypothetical protein VITISV_038875 [Vitis vinifera])

HSP 1 Score: 288.9 bits (738), Expect = 7.8e-75
Identity = 137/180 (76.11%), Postives = 158/180 (87.78%), Query Frame = 1 

Query: 46  MGAVITRLRKRLFQNREVRILMVGLDASGKTTILYKLKLGEVVMTVPTIGFNVETLEYKN 105
           MG VI+RL K LF  RE+RILMVGLDA+GKTTILYKLKLGE+V T+PTIGFNVET+EYKN
Sbjct: 1   MGLVISRLLKMLFAKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 106 ISCSVWDVGGQDKIRPLWRHYFQNTQGLVYVVDSGDRGRICEARNELHRILSEPELRNAA 165
           +S +VWDVGGQDKIRPLWRHYFQNTQGL++VVDS DR RI EA++ELHR+LSE ELR+A 
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERILEAKDELHRMLSEDELRDAT 120

Query: 166 VLVFANKQDLPQSMAVSEIANKLGLQTLSQRRWYIQGTSATSGQGLYEGFDWLCNNIIIK 225
           +LVFANKQDLP +M+VSEI +K+GL +L QRRWYIQ T ATSGQGLYEG DWL +NI  K
Sbjct: 121 LLVFANKQDLPNAMSVSEITDKMGLHSLRQRRWYIQSTCATSGQGLYEGLDWLSSNISSK 180

The following BLAST results are available for this feature:
BLAST of CmaCh19G005830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARF1_ORYSJ1.0e-7473.33ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 S... [more]
ARF2_ORYSJ1.3e-7473.33ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2[more]
ARF1_DAUCA1.7e-7473.33ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2[more]
ARF1_SALBA3.0e-7473.33ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3[more]
ARF_VIGUN3.9e-7472.78ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3[more]
BLAST of CmaCh19G005830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7V4_CUCSA1.2e-9090.66Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072830 PE=3 SV=1[more]
A5BCP0_VITVI5.4e-7576.11Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038875 PE=3 SV=1[more]
A0A067KAE8_JATCU2.1e-7475.56Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12454 PE=3 SV=1[more]
M5WK44_PRUPE7.9e-7475.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012138mg PE=3 SV=1[more]
M0SMP2_MUSAM7.9e-7474.44Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1[more]
BLAST of CmaCh19G005830 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G14670.17.5e-7673.33 ADP-ribosylation factor A1B[more]
AT1G10630.12.9e-7572.78 ADP-ribosylation factor A1F[more]
AT2G47170.14.9e-7572.78 Ras-related small GTP-binding family protein[more]
AT1G70490.18.3e-7573.45 Ras-related small GTP-binding family protein[more]
AT1G23490.18.3e-7573.45 ADP-ribosylation factor 1[more]
BLAST of CmaCh19G005830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730201|ref|XP_011659724.1|1.0e-9087.30PREDICTED: ADP-ribosylation factor 1-like [Cucumis sativus][more]
gi|700188663|gb|KGN43896.1|1.7e-9090.66hypothetical protein Csa_7G072830 [Cucumis sativus][more]
gi|659109994|ref|XP_008454992.1|3.9e-9092.09PREDICTED: ADP-ribosylation factor 1-like [Cucumis melo][more]
gi|296087398|emb|CBI33772.3|2.1e-7573.16unnamed protein product [Vitis vinifera][more]
gi|147810961|emb|CAN59803.1|7.8e-7576.11hypothetical protein VITISV_038875 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G005830.1CmaCh19G005830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 61..189
score: 5.3
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 164..185
score: 4.6E-17coord: 92..116
score: 4.6E-17coord: 119..144
score: 4.6E-17coord: 64..87
score: 4.6
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 55..222
score: 7.4
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 56..222
score: 23
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 2..74
score: 1.9E-5coord: 75..223
score: 2.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 59..222
score: 2.27
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 29..225
score: 2.3E
NoneNo IPR availablePANTHERPTHR11711:SF184SUBFAMILY NOT NAMEDcoord: 29..225
score: 2.3E
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 46..226
score: 9.9E
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 46..222
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G005830Cucsa.219550Cucumber (Gy14) v1cgycmaB0624
CmaCh19G005830Cla016044Watermelon (97103) v1cmawmB503
CmaCh19G005830Csa7G072830Cucumber (Chinese Long) v2cmacuB528
CmaCh19G005830MELO3C018481Melon (DHL92) v3.5.1cmameB463
CmaCh19G005830CSPI07G07310Wild cucumber (PI 183967)cmacpiB534
CmaCh19G005830CmoCh19G005990Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G005830CsaV3_6G043530Cucumber (Chinese Long) v3cmacucB0635
CmaCh19G005830CsaV3_7G008260Cucumber (Chinese Long) v3cmacucB0639
CmaCh19G005830Cla97C01G016210Watermelon (97103) v2cmawmbB521
CmaCh19G005830Cla97C02G033250Watermelon (97103) v2cmawmbB531
CmaCh19G005830Bhi05G000963Wax gourdcmawgoB0656
CmaCh19G005830Carg05200Silver-seed gourdcarcmaB1118
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G005830Cucurbita moschata (Rifu)cmacmoB494
CmaCh19G005830Cucurbita moschata (Rifu)cmacmoB502
CmaCh19G005830Cucurbita moschata (Rifu)cmacmoB530
CmaCh19G005830Wild cucumber (PI 183967)cmacpiB520
CmaCh19G005830Cucumber (Chinese Long) v2cmacuB513
CmaCh19G005830Melon (DHL92) v3.5.1cmameB485
CmaCh19G005830Watermelon (Charleston Gray)cmawcgB457
CmaCh19G005830Watermelon (Charleston Gray)cmawcgB460
CmaCh19G005830Watermelon (Charleston Gray)cmawcgB465
CmaCh19G005830Watermelon (97103) v1cmawmB496
CmaCh19G005830Watermelon (97103) v1cmawmB497
CmaCh19G005830Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G005830Cucurbita pepo (Zucchini)cmacpeB539
CmaCh19G005830Bottle gourd (USVL1VR-Ls)cmalsiB475
CmaCh19G005830Bottle gourd (USVL1VR-Ls)cmalsiB484
CmaCh19G005830Bottle gourd (USVL1VR-Ls)cmalsiB485
CmaCh19G005830Bottle gourd (USVL1VR-Ls)cmalsiB493
CmaCh19G005830Bottle gourd (USVL1VR-Ls)cmalsiB498
CmaCh19G005830Cucumber (Gy14) v2cgybcmaB210
CmaCh19G005830Cucumber (Gy14) v2cgybcmaB379
CmaCh19G005830Cucumber (Gy14) v2cgybcmaB521
CmaCh19G005830Cucumber (Gy14) v2cgybcmaB945
CmaCh19G005830Melon (DHL92) v3.6.1cmamedB535
CmaCh19G005830Melon (DHL92) v3.6.1cmamedB540
CmaCh19G005830Melon (DHL92) v3.6.1cmamedB561
CmaCh19G005830Melon (DHL92) v3.6.1cmamedB565
CmaCh19G005830Silver-seed gourdcarcmaB0019
CmaCh19G005830Silver-seed gourdcarcmaB0253
CmaCh19G005830Silver-seed gourdcarcmaB0407
CmaCh19G005830Silver-seed gourdcarcmaB0528
CmaCh19G005830Silver-seed gourdcarcmaB0632
CmaCh19G005830Cucumber (Chinese Long) v3cmacucB0607
CmaCh19G005830Cucumber (Chinese Long) v3cmacucB0618
CmaCh19G005830Cucumber (Chinese Long) v3cmacucB0627
CmaCh19G005830Watermelon (97103) v2cmawmbB535
CmaCh19G005830Watermelon (97103) v2cmawmbB536
CmaCh19G005830Watermelon (97103) v2cmawmbB546
CmaCh19G005830Wax gourdcmawgoB0640
CmaCh19G005830Wax gourdcmawgoB0642
CmaCh19G005830Wax gourdcmawgoB0664
CmaCh19G005830Wax gourdcmawgoB0672
CmaCh19G005830Cucurbita maxima (Rimu)cmacmaB149
CmaCh19G005830Cucurbita maxima (Rimu)cmacmaB340
CmaCh19G005830Cucurbita maxima (Rimu)cmacmaB415
CmaCh19G005830Cucurbita maxima (Rimu)cmacmaB457
CmaCh19G005830Cucurbita maxima (Rimu)cmacmaB458