Carg05200 (gene) Silver-seed gourd

Overview
NameCarg05200
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionADP-ribosylation factor
LocationCucurbita_argyrosperma_scaffold_010 : 434731 .. 435521 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGGCAATATCTCGGCTTGTAAGGATGCTGTTTGCAAAGAAAGAAATGAGGATTTTAATGGTGGGTCTTGATGCTTCTGGAAAAACAACCATTTTGTATAAGTTGAAGCTTGGAGAGATTGTCACCACCATACCCACCATCGGTATCTCCTTTTTCTAAGCCCCTTTCTAGCTTTGGTGATTACATATTTTTAATCTCTTTATTCATCGATCAGGTTTTAATGTCGAAACGGTTGAGTACAAGAATGTTAGCTTTACAGTGTGGGATGTTGGAGGCCAAGATAAGGTATTCTCTTAGTTTGATCATTCGATGAACATGAGACATATTCCATCAACCCAATAATGAAGCTTTGATTCATTGCTTTCTTGTTGATGCTATGCAGATCAGACCTCTATGGAGGCACTATTTTCAGAACACGCATGGTCTTATCTTCGTGGTGGATAGCAATGACAAAGATAGGATATCAGAAGCCAGGGATGAGCTTCACAGGATGCTCAGTGAGGTGCTTAATTCTAAATGCTTCTCTCATCCACCCTTACATATTACTTGGCTTTTACACTTAATCTTGCTCTTGCTCCTTCAAGCATGAACTGGTTGATGCAACTGTGCTGGTGTTTGCCAACAAGCAAGACCTTCCAAATGCTATGACTGTTGCTGAAATCACTGATAAACTTGGCCTTCACTCACTTCGACATCGTCGCTGGTACATATCTCTCTCTTTAGAAAATACTATTGTTGGTCTCCTATGCTATAGTCACGTAACAGATCTTCAAGCTCACCGCTAG

mRNA sequence

ATGGGAATGGCAATATCTCGGCTTGTAAGGATGCTGTTTGCAAAGAAAGAAATGAGGATTTTAATGGTGGGTCTTGATGCTTCTGGAAAAACAACCATTTTGTATAAGTTGAAGCTTGGAGAGATTGTCACCACCATACCCACCATCGGTTTTAATGTCGAAACGGTTGAGTACAAGAATGTTAGCTTTACAGTGTGGGATGTTGGAGGCCAAGATAAGATCAGACCTCTATGGAGGCACTATTTTCAGAACACGCATGGTCTTATCTTCGTGGTGGATAGCAATGACAAAGATAGGATATCAGAAGCCAGGGATGAGCTTCACAGGATGCTCAGTGAGCATGAACTGGTTGATGCAACTGTGCTGGTGTTTGCCAACAAGCAAGACCTTCCAAATGCTATGACTGTTGCTGAAATCACTGATAAACTTGGCCTTCACTCACTTCGACATCGTCGCTGGTACATATCTCTCTCTTTAGAAAATACTATTGTTGGTCTCCTATGCTATAGTCACGTAACAGATCTTCAAGCTCACCGCTAG

Coding sequence (CDS)

ATGGGAATGGCAATATCTCGGCTTGTAAGGATGCTGTTTGCAAAGAAAGAAATGAGGATTTTAATGGTGGGTCTTGATGCTTCTGGAAAAACAACCATTTTGTATAAGTTGAAGCTTGGAGAGATTGTCACCACCATACCCACCATCGGTTTTAATGTCGAAACGGTTGAGTACAAGAATGTTAGCTTTACAGTGTGGGATGTTGGAGGCCAAGATAAGATCAGACCTCTATGGAGGCACTATTTTCAGAACACGCATGGTCTTATCTTCGTGGTGGATAGCAATGACAAAGATAGGATATCAGAAGCCAGGGATGAGCTTCACAGGATGCTCAGTGAGCATGAACTGGTTGATGCAACTGTGCTGGTGTTTGCCAACAAGCAAGACCTTCCAAATGCTATGACTGTTGCTGAAATCACTGATAAACTTGGCCTTCACTCACTTCGACATCGTCGCTGGTACATATCTCTCTCTTTAGAAAATACTATTGTTGGTCTCCTATGCTATAGTCACGTAACAGATCTTCAAGCTCACCGCTAG

Protein sequence

MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGLLCYSHVTDLQAHR
Homology
[Close]
BLAST of Carg05200 vs. NCBI nr
Match: XP_022963212.1 (ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_023003501.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_023518902.1 ADP-ribosylation factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 5.9e-82
Identity = 157/166 (94.58%), Postives = 159/166 (95.78%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYI  +   +  GL
Sbjct: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGL 166

[Close]
BLAST of Carg05200 vs. NCBI nr
Match: XP_004141900.1 (PREDICTED: ADP-ribosylation factor 1 [Cucumis sativus] >XP_008440319.1 PREDICTED: ADP-ribosylation factor 1-like isoform X1 [Cucumis melo] >KGN48554.1 ADP-ribosylation factor, arf [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 6.1e-79
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG+AISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSNDK+RISEARDELHRMLSEHELVDAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERISEARDELHRMLSEHELVDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           VLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYI  +   +  GL
Sbjct: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRNRRWYIQATCATSGQGL 166

[Close]
BLAST of Carg05200 vs. NCBI nr
Match: XP_022133335.1 (ADP-ribosylation factor 2-like [Momordica charantia] >XP_022133336.1 ADP-ribosylation factor 2-like [Momordica charantia])

HSP 1 Score: 303.1 bits (775), Expect = 6.1e-79
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG+AISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSNDK+RISEARDELHRMLSEHELVDAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERISEARDELHRMLSEHELVDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           VLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYI  +   +  GL
Sbjct: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRNRRWYIQATCATSGQGL 166

[Close]
BLAST of Carg05200 vs. NCBI nr
Match: XP_012491875.1 (PREDICTED: ADP-ribosylation factor 2-like isoform X1 [Gossypium raimondii] >XP_012491876.1 PREDICTED: ADP-ribosylation factor 2-like isoform X1 [Gossypium raimondii] >XP_016683256.1 PREDICTED: ADP-ribosylation factor 2-like isoform X1 [Gossypium hirsutum] >KJB43807.1 hypothetical protein B456_007G217400 [Gossypium raimondii])

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 147/166 (88.55%), Postives = 156/166 (93.98%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGMAISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGMAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND++R+SEARDELHRMLSE EL DAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVSEARDELHRMLSEDELRDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAMTV+EITDKLGLHSLR RRWYI  +  ++  GL
Sbjct: 121 LLVFANKQDLPNAMTVSEITDKLGLHSLRQRRWYIQATCASSGQGL 166

[Close]
BLAST of Carg05200 vs. NCBI nr
Match: XP_012491877.1 (PREDICTED: ADP-ribosylation factor 2-like isoform X2 [Gossypium raimondii] >XP_016683260.1 PREDICTED: ADP-ribosylation factor 2-like isoform X2 [Gossypium hirsutum] >KJB43808.1 hypothetical protein B456_007G217400 [Gossypium raimondii])

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 147/166 (88.55%), Postives = 156/166 (93.98%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGMAISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGMAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND++R+SEARDELHRMLSE EL DAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVSEARDELHRMLSEDELRDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAMTV+EITDKLGLHSLR RRWYI  +  ++  GL
Sbjct: 121 LLVFANKQDLPNAMTVSEITDKLGLHSLRQRRWYIQATCASSGQGL 166

[Close]
BLAST of Carg05200 vs. TAIR10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 272.7 bits (696), Expect = 1.6e-73
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. TAIR10
Match: AT1G23490.1 (ADP-ribosylation factor 1)

HSP 1 Score: 272.7 bits (696), Expect = 1.6e-73
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. TAIR10
Match: AT1G10630.1 (ADP-ribosylation factor A1F)

HSP 1 Score: 272.7 bits (696), Expect = 1.6e-73
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. TAIR10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 272.3 bits (695), Expect = 2.1e-73
Identity = 134/166 (80.72%), Postives = 145/166 (87.35%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++  +L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. TAIR10
Match: AT3G62290.1 (ADP-ribosylation factor A1E)

HSP 1 Score: 272.3 bits (695), Expect = 2.1e-73
Identity = 134/166 (80.72%), Postives = 145/166 (87.35%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++  +L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. Swiss-Prot
Match: sp|O48649|ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko OX=72444 GN=ARF1 PE=2 SV=3)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-72
Identity = 133/166 (80.12%), Postives = 147/166 (88.55%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L+  LF+KKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. Swiss-Prot
Match: sp|Q9LQC8|ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-72
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. Swiss-Prot
Match: sp|P0DH91|ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-72
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. Swiss-Prot
Match: sp|O48920|ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-72
Identity = 134/166 (80.72%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++ ++L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. Swiss-Prot
Match: sp|P36397|ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 3.8e-72
Identity = 134/166 (80.72%), Postives = 145/166 (87.35%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG++  +L   LFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           +SFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND+DR+ EARDELHRML+E EL DA 
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAM  AEITDKLGLHSLR R WYI  +   +  GL
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 166

[Close]
BLAST of Carg05200 vs. TrEMBL
Match: tr|A0A1S3B0V6|A0A1S3B0V6_CUCME (ADP-ribosylation factor 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484803 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 4.0e-79
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG+AISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSNDK+RISEARDELHRMLSEHELVDAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERISEARDELHRMLSEHELVDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           VLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYI  +   +  GL
Sbjct: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRNRRWYIQATCATSGQGL 166

[Close]
BLAST of Carg05200 vs. TrEMBL
Match: tr|A0A0A0KID8|A0A0A0KID8_CUCSA (ADP-ribosylation factor, arf OS=Cucumis sativus OX=3659 GN=Csa_6G491660 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 4.0e-79
Identity = 152/166 (91.57%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MG+AISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSNDK+RISEARDELHRMLSEHELVDAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERISEARDELHRMLSEHELVDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           VLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYI  +   +  GL
Sbjct: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRNRRWYIQATCATSGQGL 166

[Close]
BLAST of Carg05200 vs. TrEMBL
Match: tr|A0A1U8IYU2|A0A1U8IYU2_GOSHI (ADP-ribosylation factor 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107901677 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 147/166 (88.55%), Postives = 156/166 (93.98%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGMAISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGMAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND++R+SEARDELHRMLSE EL DAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVSEARDELHRMLSEDELRDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAMTV+EITDKLGLHSLR RRWYI  +  ++  GL
Sbjct: 121 LLVFANKQDLPNAMTVSEITDKLGLHSLRQRRWYIQATCASSGQGL 166

[Close]
BLAST of Carg05200 vs. TrEMBL
Match: tr|A0A1U8IYV8|A0A1U8IYV8_GOSHI (ADP-ribosylation factor 2-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107901677 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 147/166 (88.55%), Postives = 156/166 (93.98%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGMAISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGMAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND++R+SEARDELHRMLSE EL DAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVSEARDELHRMLSEDELRDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAMTV+EITDKLGLHSLR RRWYI  +  ++  GL
Sbjct: 121 LLVFANKQDLPNAMTVSEITDKLGLHSLRQRRWYIQATCASSGQGL 166

[Close]
BLAST of Carg05200 vs. TrEMBL
Match: tr|A0A0D2QXC6|A0A0D2QXC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G217400 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 147/166 (88.55%), Postives = 156/166 (93.98%), Query Frame = 0 

Query: 1   MGMAISRLVRMLFAKKEMRILMVGLDASGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGMAISRLVRMLFAKKEMRILMVGLDA+GKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGMAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  VSFTVWDVGGQDKIRPLWRHYFQNTHGLIFVVDSNDKDRISEARDELHRMLSEHELVDAT 120
           VSFTVWDVGGQDKIRPLWRHYFQNT GLIFVVDSND++R+SEARDELHRMLSE EL DAT
Sbjct: 61  VSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVSEARDELHRMLSEDELRDAT 120

Query: 121 VLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYISLSLENTIVGL 167
           +LVFANKQDLPNAMTV+EITDKLGLHSLR RRWYI  +  ++  GL
Sbjct: 121 LLVFANKQDLPNAMTVSEITDKLGLHSLRQRRWYIQATCASSGQGL 166

The following BLAST results are available for this feature:
BLAST of Carg05200 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963212.15.9e-8294.58ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_023003501.1 ADP-ribosyla... [more]
XP_004141900.16.1e-7991.57PREDICTED: ADP-ribosylation factor 1 [Cucumis sativus] >XP_008440319.1 PREDICTED... [more]
XP_022133335.16.1e-7991.57ADP-ribosylation factor 2-like [Momordica charantia] >XP_022133336.1 ADP-ribosyl... [more]
XP_012491875.12.2e-7688.55PREDICTED: ADP-ribosylation factor 2-like isoform X1 [Gossypium raimondii] >XP_0... [more]
XP_012491877.12.2e-7688.55PREDICTED: ADP-ribosylation factor 2-like isoform X2 [Gossypium raimondii] >XP_0... [more]
BLAST of Carg05200 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70490.11.6e-7380.72Ras-related small GTP-binding family protein[more]
AT1G23490.11.6e-7380.72ADP-ribosylation factor 1[more]
AT1G10630.11.6e-7380.72ADP-ribosylation factor A1F[more]
AT2G47170.12.1e-7380.72Ras-related small GTP-binding family protein[more]
AT3G62290.12.1e-7380.72ADP-ribosylation factor A1E[more]
BLAST of Carg05200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O48649|ARF1_SALBA2.9e-7280.12ADP-ribosylation factor 1 OS=Salix bakko OX=72444 GN=ARF1 PE=2 SV=3[more]
sp|Q9LQC8|ARF2A_ARATH2.9e-7280.72ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2[more]
sp|P0DH91|ARF2B_ARATH2.9e-7280.72ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1[more]
sp|O48920|ARF_VIGUN2.9e-7280.72ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3[more]
sp|P36397|ARF1_ARATH3.8e-7280.72ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2[more]
BLAST of Carg05200 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B0V6|A0A1S3B0V6_CUCME4.0e-7991.57ADP-ribosylation factor 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348480... [more]
tr|A0A0A0KID8|A0A0A0KID8_CUCSA4.0e-7991.57ADP-ribosylation factor, arf OS=Cucumis sativus OX=3659 GN=Csa_6G491660 PE=3 SV=... [more]
tr|A0A1U8IYU2|A0A1U8IYU2_GOSHI1.4e-7688.55ADP-ribosylation factor 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC10... [more]
tr|A0A1U8IYV8|A0A1U8IYV8_GOSHI1.4e-7688.55ADP-ribosylation factor 2-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC10... [more]
tr|A0A0D2QXC6|A0A0D2QXC6_GOSRA1.4e-7688.55Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G217400 PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05200-RACarg05200-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 119..140
score: 31.28
coord: 74..99
score: 33.48
coord: 47..71
score: 31.06
coord: 19..42
score: 48.28
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 7..157
e-value: 5.6E-68
score: 227.7
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..179
e-value: 1.5E-103
score: 360.0
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..179
e-value: 4.3E-18
score: 76.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..173
e-value: 0.0087
score: -75.0
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 18..166
e-value: 1.2E-63
score: 215.6
NoneNo IPR availablePANTHERPTHR11711:SF182SUBFAMILY NOT NAMEDcoord: 1..158
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..158
NoneNo IPR availableCDDcd04150Arf1_5_likecoord: 18..155
e-value: 4.90462E-101
score: 290.077
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..136
e-value: 1.0E-21
score: 75.4
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 11..179
score: 21.584
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..155

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05200Cla013976Watermelon (97103) v1carwmB0805
Carg05200Cla016044Watermelon (97103) v1carwmB0812
Carg05200Csa6G491660Cucumber (Chinese Long) v2carcuB0826
Carg05200Csa7G072830Cucumber (Chinese Long) v2carcuB0827
Carg05200MELO3C007583Melon (DHL92) v3.5.1carmeB0807
Carg05200ClCG01G017060Watermelon (Charleston Gray)carwcgB0778
Carg05200CSPI06G28370Wild cucumber (PI 183967)carcpiB0846
Carg05200CSPI07G07310Wild cucumber (PI 183967)carcpiB0849
Carg05200Cucsa.219550Cucumber (Gy14) v1carcgyB0920
Carg05200Cucsa.102680Cucumber (Gy14) v1carcgyB0918
Carg05200CmaCh07G006820Cucurbita maxima (Rimu)carcmaB1130
Carg05200CmaCh19G005830Cucurbita maxima (Rimu)carcmaB1118
Carg05200CmoCh07G006940Cucurbita moschata (Rifu)carcmoB1100
Carg05200CmoCh19G005990Cucurbita moschata (Rifu)carcmoB1089
Carg05200Lsi01G009510Bottle gourd (USVL1VR-Ls)carlsiB742
Carg05200CsGy6G027860Cucumber (Gy14) v2carcgybB0799
Carg05200MELO3C007583.2Melon (DHL92) v3.6.1carmedB0818
Carg05200CsaV3_7G008260Cucumber (Chinese Long) v3carcucB0852
Carg05200CsaV3_6G043530Cucumber (Chinese Long) v3carcucB0849
Carg05200Cla97C01G016210Watermelon (97103) v2carwmbB0839
Carg05200Bhi03G000724Wax gourdcarwgoB0948
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg05200Silver-seed gourdcarcarB225
Carg05200Silver-seed gourdcarcarB428
Carg05200Cucumber (Gy14) v2carcgybB0792
Carg05200Cucurbita maxima (Rimu)carcmaB1115
Carg05200Cucurbita maxima (Rimu)carcmaB1119
Carg05200Cucurbita maxima (Rimu)carcmaB1125
Carg05200Cucurbita moschata (Rifu)carcmoB1090
Carg05200Cucurbita moschata (Rifu)carcmoB1095
Carg05200Cucurbita pepo (Zucchini)carcpeB1128
Carg05200Cucurbita pepo (Zucchini)carcpeB1130
Carg05200Cucurbita pepo (Zucchini)carcpeB1135
Carg05200Cucurbita pepo (Zucchini)carcpeB1136
Carg05200Cucurbita pepo (Zucchini)carcpeB1140
Carg05200Wild cucumber (PI 183967)carcpiB0838
Carg05200Wild cucumber (PI 183967)carcpiB0848
Carg05200Cucumber (Chinese Long) v2carcuB0818
Carg05200Cucumber (Chinese Long) v2carcuB0828
Carg05200Cucumber (Chinese Long) v3carcucB0842
Carg05200Cucumber (Chinese Long) v3carcucB0851
Carg05200Bottle gourd (USVL1VR-Ls)carlsiB738
Carg05200Bottle gourd (USVL1VR-Ls)carlsiB740
Carg05200Melon (DHL92) v3.5.1carmeB0800
Carg05200Melon (DHL92) v3.5.1carmeB0801
Carg05200Melon (DHL92) v3.6.1carmedB0812
Carg05200Watermelon (Charleston Gray)carwcgB0780
Carg05200Watermelon (Charleston Gray)carwcgB0784
Carg05200Watermelon (97103) v1carwmB0808
Carg05200Watermelon (97103) v1carwmB0813
Carg05200Watermelon (97103) v2carwmbB0842
Carg05200Wax gourdcarwgoB0943
Carg05200Wax gourdcarwgoB0950