CmaCh19G005660 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G005660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr19 : 6397633 .. 6399063 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTCAAGCTTTGTTTTGCTTCACTTTGATCTCCATTGCCTTCGCCGTTGCCGGAGCTCAACCCCCCTCCAGTCCCCCCACCGCCACCCCCGCTCCTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCACTCCTCCTCCAGCATCCCCACCACCAGCCACTCCTCCTCCAGCATCCCCACCACCAGCCACTCCTCCTCCGGCATCCCCACCACCAGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCTCCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTTCGGCCCCAGTTTCGAGCCCGCCGATGCCATCCGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAAAACGACAATGTAAGCTTCATTATATACTTCCACTAATCATACATTAATCTTCTACTAAAATTTTAAAGTTTAAATTTTGATGTTATTAAACTAATAATTCTACATTTTCAAATAATTTTTTTTTAGATTCATCCAAAAAAATGTAACTCATTTTTTACATTTTTTTAATTTTAAAATTATCCTACACAAATCAAGAGTTTATAGACCTTCGATCCTAGATTCCATGTAAATTAAAATTTTACCGTCCTATTACATATAAAATTTATTTTAAAATTATATAGAAATCAACTTATAAGCTAATTAATACACACAAAATTAAAAGCCTTTAAAGCTTGTAAACTTTTATGACAAGAACATGAACGAAAACTTCTAGATCTTCTTGCATTTCACGCTACGTTTTTTGTTAGTCATTATCATCGAACATATATTCATGAAAATGCTAACACGATATGTCGGGTTGATGGACATTATTATTATTATTATTATTATTTGCAGAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAGTGTTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAGATTTCTTCCTTTTTTATGCTGTCTATGTTGGGTTTTCATTATTCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTAGCCCATTTCTTGTTTGGGACTTTTGATCTCCATATATATATAAATACCCATTTTCTTCCCTTCCGTTCTTTTGACTTAGTTCAGTTTAAAAATGTTGGGACGTTTTAAAATTATGGATTCGAATCACTCAAAGCGTGTATCTGAAATGTTATGCTGAAAAATGTTTTAGATGTGTCGG

mRNA sequence

ATGGATCCTCAAGCTTTGTTTTGCTTCACTTTGATCTCCATTGCCTTCGCCGTTGCCGGAGCTCAACCCCCCTCCAGTCCCCCCACCGCCACCCCCGCTCCTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCACTCCTCCTCCAGCATCCCCACCACCAGCCACTCCTCCTCCAGCATCCCCACCACCAGCCACTCCTCCTCCGGCATCCCCACCACCAGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCTCCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTTCGGCCCCAGTTTCGAGCCCGCCGATGCCATCCGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAAAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAGTGTTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAGATTTCTTCCTTTTTTATGCTGTCTATGTTGGGTTTTCATTATTCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTAGCCCATTTCTTGTTTGGGACTTTTGATCTCCATATATATATAAATACCCATTTTCTTCCCTTCCGTTCTTTTGACTTAGTTCAGTTTAAAAATGTTGGGACGTTTTAAAATTATGGATTCGAATCACTCAAAGCGTGTATCTGAAATGTTATGCTGAAAAATGTTTTAGATGTGTCGG

Coding sequence (CDS)

ATGGATCCTCAAGCTTTGTTTTGCTTCACTTTGATCTCCATTGCCTTCGCCGTTGCCGGAGCTCAACCCCCCTCCAGTCCCCCCACCGCCACCCCCGCTCCTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCACTCCTCCTCCAGCATCCCCACCACCAGCCACTCCTCCTCCAGCATCCCCACCACCAGCCACTCCTCCTCCGGCATCCCCACCACCAGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCTCCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTTCGGCCCCAGTTTCGAGCCCGCCGATGCCATCCGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAAAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAGTGTTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAG

Protein sequence

MDPQALFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMMA

Homology

[Close]

BLAST of CmaCh19G005660 vs. Swiss-Prot
Match: AGP9_ARATH (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana GN=AGP9 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 87/148 (58.78%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 87  ATPPPAS-PPPAT---------PPPASPPP--ATPPPASPPPATPPP-ASPPP--ATPPP 146
           ATPPP S PPP T         PPPA+PPP  ++PPPASPPPATPPP ASPPP  A+PPP
Sbjct: 43  ATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPP 102

Query: 147 ATPPP-ATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPE-SP 206
           ATPPP ATPPPAPLASPPA VPAPAP+ K    +P  +P SSPP+PS++ PGP+    SP
Sbjct: 103 ATPPPVATPPPAPLASPPAQVPAPAPTTK--PDSPSPSPSSSPPLPSSDAPGPSTDSISP 162

Query: 207 TPSQ---NDNSGVEKSWRKETVLGSMLI 215
            PS    ND +G  K      V GS+L+
Sbjct: 163 APSPTDVNDQNGASK-MVSSLVFGSVLV 187

[Close]

BLAST of CmaCh19G005660 vs. TrEMBL
Match: A0A0A0K6D8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071560 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.7e-45
Identity = 141/225 (62.67%), Postives = 159/225 (70.67%), Query Frame = 1


Query: 1   MDPQALFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDP+AL CFTLISIAF +A AQ PSSPPTATP+PP                         
Sbjct: 1   MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP------ 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATPP 120
                                     A+PPPASPPPA+PPPA+PPPA+PPPASPPPA+PP
Sbjct: 61  --------------------------ASPPPASPPPASPPPATPPPASPPPASPPPASPP 120

Query: 121 PASPPPATPPPAT-PPPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGSAPVSSPPMPSA 180
           PASPPPATPPPA+ PPPATPPPAPLASPP AVPAPAPSKKK+K AAP  +PVSSPP PS 
Sbjct: 121 PASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSV 180

Query: 181 EGPGPAGP-ESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
           E PGPAGP +SPTPSQNDNSGVEK WRKE+++GS++IGMGYV +M
Sbjct: 181 EAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 193

[Close]

BLAST of CmaCh19G005660 vs. TrEMBL
Match: A0A0B0Q0X1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_15564 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23
Identity = 114/226 (50.44%), Postives = 132/226 (58.41%), Query Frame = 1


Query: 5   ALFCFTLISIAFAVAGAQP-PSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           ALFC   I++A  +  A P PS+PPT+TPAPP                            
Sbjct: 12  ALFC---IAVAGVLGQAPPTPSNPPTSTPAPPTPPASTPPPTTQPPPTPTTTSPPPASSP 71

Query: 65  XXXXXXXXXXXXXXXXXXXXXXXATPPPA------SPPPATPPPASPPPATPPPASPPPA 124
                                  +TPPPA      SPPPA+PPPA+PPPATPPPASPPPA
Sbjct: 72  PPTSSPPPVTASPPPV-------STPPPATPPSVSSPPPASPPPATPPPATPPPASPPPA 131

Query: 125 TPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPS 184
           TPPPASPPPATPPPATPPPATPPPAPLASPPA VPAPAPSK K K+   S   SSPP PS
Sbjct: 132 TPPPASPPPATPPPATPPPATPPPAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSPS 191

Query: 185 AEGPGPA-GPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
            E P P+ G  SP P+  D SGVEK+W    ++ S++IG G + +M
Sbjct: 192 NEAPTPSLGASSPGPAGTDTSGVEKTWSIRKMVWSLVIGWGILSLM 227

[Close]

BLAST of CmaCh19G005660 vs. TrEMBL
Match: A0A0D2S8H0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G048900 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-22
Identity = 109/221 (49.32%), Postives = 131/221 (59.28%), Query Frame = 1


Query: 5   ALFCFTLISIAFAVAGAQP-PSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           ALFC   I++A A+  A P PS+PPT+TP PP                            
Sbjct: 12  ALFC---IAVAGALGQAPPTPSNPPTSTPVPPTPPASTPPPTTQPPPTPTTTSPPPASTP 71

Query: 65  XXXXXXXXXXXXXXXXXXXXXXXATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPA 124
                                  ATPPP +SPPPA+PPPA+PPPATPPPA+PPPA+PP A
Sbjct: 72  PPTSSPPPVTASPPPVSTPPP--ATPPPVSSPPPASPPPATPPPATPPPATPPPASPPQA 131

Query: 125 SPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPG 184
           +PPPA+PPPATPPPATPPPAPLASPPA VPAPAPSK K K+   S   SSPP PS E P 
Sbjct: 132 TPPPASPPPATPPPATPPPAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSPSTEAPT 191

Query: 185 PA-GPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
           P+ G  SP P+  D SGVEK+W    ++ S++IG G + +M
Sbjct: 192 PSLGASSPGPAGTDTSGVEKTWSIRKMVWSLVIGWGVLTLM 227

[Close]

BLAST of CmaCh19G005660 vs. TrEMBL
Match: A0A0C5IBM0_GOSHI (PRP10 OS=Gossypium hirsutum GN=PRP10 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-22
Identity = 109/221 (49.32%), Postives = 131/221 (59.28%), Query Frame = 1


Query: 5   ALFCFTLISIAFAVAGAQP-PSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           ALFC   I++A A+  A P PS+PPT+TP PP                            
Sbjct: 12  ALFC---IAVAGALGQAPPTPSNPPTSTPVPPTPPASTPPPTTQPPPTPTTTSPPPASTP 71

Query: 65  XXXXXXXXXXXXXXXXXXXXXXXATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPA 124
                                  ATPPP +SPPPA+PPPA+PPPATPPPA+PPPA+PP A
Sbjct: 72  PPTSSPPPVTASPPPVSTPPP--ATPPPVSSPPPASPPPATPPPATPPPATPPPASPPQA 131

Query: 125 SPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPG 184
           +PPPA+PPPATPPPATPPPAPLASPPA VPAPAPSK K K+   S   SSPP PS E P 
Sbjct: 132 TPPPASPPPATPPPATPPPAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSPSTEAPT 191

Query: 185 PA-GPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
           P+ G  SP P+  D SGVEK+W    ++ S++IG G + +M
Sbjct: 192 PSLGASSPGPAGTDTSGVEKTWSIRKMVWSLVIGWGILTLM 227

[Close]

BLAST of CmaCh19G005660 vs. TrEMBL
Match: F6H678_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00420 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.9e-21
Identity = 103/197 (52.28%), Postives = 116/197 (58.88%), Query Frame = 1


Query: 1   MDPQALFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MD ++L    L+ I FA  G Q P+  PTATPAPP                         
Sbjct: 69  MDCKSLLVLGLVCIVFAGVGGQAPAGGPTATPAPPTPTTPAASPPTAVTSPPASSPPPVS 128

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATPP 120
                                     ATPPPA+PPPATPPPA+PPPATPPPA+PPPATPP
Sbjct: 129 APPPATPPPATPPPATPPPATPPP--ATPPPATPPPATPPPATPPPATPPPATPPPATPP 188

Query: 121 PASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPV-SSPPMPSAE 180
           PA+PPPATPPPATPPPATPPPAPLASPPAAVPAPAPS K    A   +P+ +SPP P AE
Sbjct: 189 PATPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSTKVKSPALAPSPLTNSPPAPPAE 248

Query: 181 GPGP-AGPESPTPSQND 196
            PGP +G  SP P+ ND
Sbjct: 249 APGPISGGISPAPAAND 263

[Close]

BLAST of CmaCh19G005660 vs. TAIR10
Match: AT2G14890.1 (AT2G14890.1 arabinogalactan protein 9)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 87/148 (58.78%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 87  ATPPPAS-PPPAT---------PPPASPPP--ATPPPASPPPATPPP-ASPPP--ATPPP 146
           ATPPP S PPP T         PPPA+PPP  ++PPPASPPPATPPP ASPPP  A+PPP
Sbjct: 43  ATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPP 102

Query: 147 ATPPP-ATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPE-SP 206
           ATPPP ATPPPAPLASPPA VPAPAP+ K    +P  +P SSPP+PS++ PGP+    SP
Sbjct: 103 ATPPPVATPPPAPLASPPAQVPAPAPTTK--PDSPSPSPSSSPPLPSSDAPGPSTDSISP 162

Query: 207 TPSQ---NDNSGVEKSWRKETVLGSMLI 215
            PS    ND +G  K      V GS+L+
Sbjct: 163 APSPTDVNDQNGASK-MVSSLVFGSVLV 187

[Close]

BLAST of CmaCh19G005660 vs. NCBI nr
Match: gi|659110043|ref|XP_008455018.1| (PREDICTED: classical arabinogalactan protein 9 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 5.7e-46
Identity = 142/225 (63.11%), Postives = 160/225 (71.11%), Query Frame = 1


Query: 1   MDPQA-LFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDP+A L CFT ISIAFA+AGAQ PSSPPTATP+PP                        
Sbjct: 2   MDPRAFLLCFTFISIAFAIAGAQSPSSPPTATPSPPTTSAPPPASTPPPVSSPPPAATPP 61

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATP 120
                                      A+PPPASPPPA+PPPA+PPPA+PPPASPPPA+P
Sbjct: 62  PAATPPP--------------------ASPPPASPPPASPPPATPPPASPPPASPPPASP 121

Query: 121 PPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGSAPVSSPPMPSA 180
           PPASPPPA+PPPA+PPPA PPPAPLASPP AVPAPAPSKKK+K AAPG APVSSPP PS 
Sbjct: 122 PPASPPPASPPPASPPPAIPPPAPLASPPTAVPAPAPSKKKVKAAAPGPAPVSSPPAPSV 181

Query: 181 EGPGPAGP-ESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
           E PGPAGP +SPTPSQNDNSGVEK WRKE+++GS++IGMGYV +M
Sbjct: 182 EAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 206

[Close]

BLAST of CmaCh19G005660 vs. NCBI nr
Match: gi|778724917|ref|XP_004136948.2| (PREDICTED: classical arabinogalactan protein 9 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 8.2e-45
Identity = 141/225 (62.67%), Postives = 159/225 (70.67%), Query Frame = 1


Query: 1   MDPQALFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDP+AL CFTLISIAF +A AQ PSSPPTATP+PP                         
Sbjct: 1   MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP------ 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATPP 120
                                     A+PPPASPPPA+PPPA+PPPA+PPPASPPPA+PP
Sbjct: 61  --------------------------ASPPPASPPPASPPPATPPPASPPPASPPPASPP 120

Query: 121 PASPPPATPPPAT-PPPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGSAPVSSPPMPSA 180
           PASPPPATPPPA+ PPPATPPPAPLASPP AVPAPAPSKKK+K AAP  +PVSSPP PS 
Sbjct: 121 PASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSV 180

Query: 181 EGPGPAGP-ESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
           E PGPAGP +SPTPSQNDNSGVEK WRKE+++GS++IGMGYV +M
Sbjct: 181 EAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 193

[Close]

BLAST of CmaCh19G005660 vs. NCBI nr
Match: gi|731383936|ref|XP_002272036.3| (PREDICTED: classical arabinogalactan protein 9 [Vitis vinifera])

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-26
Identity = 113/224 (50.45%), Postives = 132/224 (58.93%), Query Frame = 1


Query: 1   MDPQALFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MD ++L    L+ I FA  G Q P+  PTATPAPP                         
Sbjct: 69  MDCKSLLVLGLVCIVFAGVGGQAPAGGPTATPAPPTPTTPAASPPTAVTSPPASSPPPVS 128

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATPP 120
                                     ATPPPA+PPPATPPPA+PPPATPPPA+PPPATPP
Sbjct: 129 APPPATPPPATPPPATPPPATPPP--ATPPPATPPPATPPPATPPPATPPPATPPPATPP 188

Query: 121 PASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPV-SSPPMPSAE 180
           PA+PPPATPPPATPPPATPPPAPLASPPAAVPAPAPS K    A   +P+ +SPP P AE
Sbjct: 189 PATPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSTKVKSPALAPSPLTNSPPAPPAE 248

Query: 181 GPGP-AGPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
            PGP +G  SP P+ ND +GVEK W  + V GS+  G+   L++
Sbjct: 249 APGPISGGISPAPAANDVNGVEKLWSMKKVAGSLAFGLALSLVI 290

[Close]

BLAST of CmaCh19G005660 vs. NCBI nr
Match: gi|728851021|gb|KHG30464.1| (hypothetical protein F383_15564 [Gossypium arboreum])

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-23
Identity = 114/226 (50.44%), Postives = 132/226 (58.41%), Query Frame = 1


Query: 5   ALFCFTLISIAFAVAGAQP-PSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           ALFC   I++A  +  A P PS+PPT+TPAPP                            
Sbjct: 12  ALFC---IAVAGVLGQAPPTPSNPPTSTPAPPTPPASTPPPTTQPPPTPTTTSPPPASSP 71

Query: 65  XXXXXXXXXXXXXXXXXXXXXXXATPPPA------SPPPATPPPASPPPATPPPASPPPA 124
                                  +TPPPA      SPPPA+PPPA+PPPATPPPASPPPA
Sbjct: 72  PPTSSPPPVTASPPPV-------STPPPATPPSVSSPPPASPPPATPPPATPPPASPPPA 131

Query: 125 TPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPS 184
           TPPPASPPPATPPPATPPPATPPPAPLASPPA VPAPAPSK K K+   S   SSPP PS
Sbjct: 132 TPPPASPPPATPPPATPPPATPPPAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSPS 191

Query: 185 AEGPGPA-GPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
            E P P+ G  SP P+  D SGVEK+W    ++ S++IG G + +M
Sbjct: 192 NEAPTPSLGASSPGPAGTDTSGVEKTWSIRKMVWSLVIGWGILSLM 227

[Close]

BLAST of CmaCh19G005660 vs. NCBI nr
Match: gi|823264209|ref|XP_012464846.1| (PREDICTED: classical arabinogalactan protein 9-like [Gossypium raimondii])

HSP 1 Score: 112.5 bits (280), Expect = 9.8e-22
Identity = 109/221 (49.32%), Postives = 131/221 (59.28%), Query Frame = 1


Query: 5   ALFCFTLISIAFAVAGAQP-PSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
           ALFC   I++A A+  A P PS+PPT+TP PP                            
Sbjct: 12  ALFC---IAVAGALGQAPPTPSNPPTSTPVPPTPPASTPPPTTQPPPTPTTTSPPPASTP 71

Query: 65  XXXXXXXXXXXXXXXXXXXXXXXATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPA 124
                                  ATPPP +SPPPA+PPPA+PPPATPPPA+PPPA+PP A
Sbjct: 72  PPTSSPPPVTASPPPVSTPPP--ATPPPVSSPPPASPPPATPPPATPPPATPPPASPPQA 131

Query: 125 SPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPG 184
           +PPPA+PPPATPPPATPPPAPLASPPA VPAPAPSK K K+   S   SSPP PS E P 
Sbjct: 132 TPPPASPPPATPPPATPPPAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSPSTEAPT 191

Query: 185 PA-GPESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 223
           P+ G  SP P+  D SGVEK+W    ++ S++IG G + +M
Sbjct: 192 PSLGASSPGPAGTDTSGVEKTWSIRKMVWSLVIGWGVLTLM 227

The following BLAST results are available for this feature:

BLAST of CmaCh19G005660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGP9_ARATH	2.3e-10	58.78	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana GN=AGP9 PE=1 SV=2	[more]

BLAST of CmaCh19G005660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6D8_CUCSA	5.7e-45	62.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071560 PE=4 SV=1	[more]
A0A0B0Q0X1_GOSAR	1.6e-23	50.44	Uncharacterized protein OS=Gossypium arboreum GN=F383_15564 PE=4 SV=1	[more]
A0A0D2S8H0_GOSRA	6.8e-22	49.32	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G048900 PE=4 SV=1	[more]
A0A0C5IBM0_GOSHI	6.8e-22	49.32	PRP10 OS=Gossypium hirsutum GN=PRP10 PE=2 SV=1	[more]
F6H678_VITVI	9.9e-21	52.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00420 PE=4 SV=...	[more]

BLAST of CmaCh19G005660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14890.1	1.3e-11	58.78	arabinogalactan protein 9	[more]

BLAST of CmaCh19G005660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110043\|ref\|XP_008455018.1\|	5.7e-46	63.11	PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]	[more]
gi\|778724917\|ref\|XP_004136948.2\|	8.2e-45	62.67	PREDICTED: classical arabinogalactan protein 9 [Cucumis sativus]	[more]
gi\|731383936\|ref\|XP_002272036.3\|	6.6e-26	50.45	PREDICTED: classical arabinogalactan protein 9 [Vitis vinifera]	[more]
gi\|728851021\|gb\|KHG30464.1\|	2.3e-23	50.44	hypothetical protein F383_15564 [Gossypium arboreum]	[more]
gi\|823264209\|ref\|XP_012464846.1\|	9.8e-22	49.32	PREDICTED: classical arabinogalactan protein 9-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G005660.1	CmaCh19G005660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 20..36 score: 1.1E-11coord: 87..104 score: 1.1E-11coord: 105..130 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G005660	Csa7G071560	Cucumber (Chinese Long) v2	cmacuB528
CmaCh19G005660	MELO3C018504	Melon (DHL92) v3.5.1	cmameB463
CmaCh19G005660	CSPI07G07030	Wild cucumber (PI 183967)	cmacpiB534
CmaCh19G005660	Cp4.1LG15g04520	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G005660	CsaV3_7G008010	Cucumber (Chinese Long) v3	cmacucB0639
CmaCh19G005660	Carg16348	Silver-seed gourd	carcmaB0632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G005660	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh19G005660	Cucurbita maxima (Rimu)	cmacmaB340
CmaCh19G005660	Cucurbita maxima (Rimu)	cmacmaB415
CmaCh19G005660	Cucurbita maxima (Rimu)	cmacmaB457
CmaCh19G005660	Cucurbita maxima (Rimu)	cmacmaB458
CmaCh19G005660	Cucumber (Gy14) v1	cgycmaB0624
CmaCh19G005660	Cucurbita moschata (Rifu)	cmacmoB494
CmaCh19G005660	Cucurbita moschata (Rifu)	cmacmoB502
CmaCh19G005660	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G005660	Cucurbita moschata (Rifu)	cmacmoB530
CmaCh19G005660	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G005660	Watermelon (97103) v1	cmawmB503
CmaCh19G005660	Cucurbita pepo (Zucchini)	cmacpeB539
CmaCh19G005660	Bottle gourd (USVL1VR-Ls)	cmalsiB484
CmaCh19G005660	Bottle gourd (USVL1VR-Ls)	cmalsiB485
CmaCh19G005660	Bottle gourd (USVL1VR-Ls)	cmalsiB498
CmaCh19G005660	Cucumber (Gy14) v2	cgybcmaB210
CmaCh19G005660	Cucumber (Gy14) v2	cgybcmaB521
CmaCh19G005660	Cucumber (Gy14) v2	cgybcmaB945
CmaCh19G005660	Melon (DHL92) v3.6.1	cmamedB535
CmaCh19G005660	Melon (DHL92) v3.6.1	cmamedB540
CmaCh19G005660	Melon (DHL92) v3.6.1	cmamedB561
CmaCh19G005660	Silver-seed gourd	carcmaB0253
CmaCh19G005660	Silver-seed gourd	carcmaB0261
CmaCh19G005660	Silver-seed gourd	carcmaB0407
CmaCh19G005660	Silver-seed gourd	carcmaB0528
CmaCh19G005660	Cucumber (Chinese Long) v3	cmacucB0607
CmaCh19G005660	Cucumber (Chinese Long) v3	cmacucB0627
CmaCh19G005660	Watermelon (97103) v2	cmawmbB531
CmaCh19G005660	Watermelon (97103) v2	cmawmbB535
CmaCh19G005660	Watermelon (97103) v2	cmawmbB546
CmaCh19G005660	Wax gourd	cmawgoB0642
CmaCh19G005660	Wax gourd	cmawgoB0664
CmaCh19G005660	Wax gourd	cmawgoB0672