CmaCh19G004990 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAACCCTCATCGGCGCTTTCTCTGCAAAATAATCTTTCCCTCTCTCTCTCTCTCTCTCTCATGGGCTTTTCCATTCTCCGAGCTTCCCCTCTCTCCTCCTCCCGAGCTCTTCTCTGCAACCCTACGCCCGTCGCCGCTCTTCCCATCCTCCGTCTTCCTCTCCGCTCTTCTCACCATTCATCGCTCTCCCTAACCCATTTCGAATCATCTTCTTCCTCGGCGAATCGTACTTCTTTTGCCGTTTCTGCTACTCGATTTGGTGGTGCTTTTGCTTTGAGACCTCGTAGCTTCCGTCGGGGCCGTGTTTTGGCTATGTCTTCGCCTAATTCAGTCCAGAAATCGGAGGAGGAGTGGCGAGCCATCCTCTCGCCCGAGCAGTTTCGAATTCTCCGGCAAAAAGGAACTGAGTAAGCACCTGTTCTTGCCATTTCTACACTTGAATATATATTTATTTTTTTAGGTTAATTGATTCTCCGATTCTGCGTTTAGTTGTTGATTGGTAGTTGTAGCTTCTATGAATTTTTCAAGGAAATCATCTTATAATTTTTCTTTGAATTGCTCAATAGCTATTTTATGTTCAGAAAACTGTATTATTCAACACCACACTCTGCTTTTTGTAATGGCCTAAGTCCATGTCAGCTGATATTGTCTACGTTGAACTTTCCCTCGAGATTTTTAAAATGTGTGCTAGAGAGAGACTTGTTCTACTCACCAACCAAAGTGGGATCTCACAGTCCATCTCCCGTCGGGGCCCAGCGTTATCGCTGACACTCATTTCTTATCCAATCGATGTAGGACCCCCTAATCCACCCACCTTTAGGGCCTAGCGCCCTTGCTGGCACACTGCCTCATGTCCACCCTCTTTGGGGCTCAGCCTTCTCGCTAACACATAGCCCAATGTCTAGCTCCTATACCATTTGTAATGGCCCAAGTCCACTGCGAGCAAATATTGTCCTATTTGGACTTTCCGTTTCGAGCTTTCCCTCCAGATTTTTAAAACGCGTATGCTAGGGAGAGGTTTCCACCTTTACAAACAATGCTTAATTCTCCTCCCCAATCGATGTGGGATCTCACCGTTTTTATGTCTATGCGCAACCTAGCTCGCTTCCTCTGTTTTGATTACATTAATGTAATATTTTCTTGCATTATTTGTATTCTTGGTTATCCAGTCCATTTCGAACCATAAGTTCCATAGTTGCAAAATTTCTTACTTTCTATGTCAATCCGATTCAATTAGTAACAAATGGTGTGGAAACTCAGGGTGACTTCGTGATTCATTTTGACAAAAGTGCTTTTGAGTACAACTCTGCAAATGGTTTTAGAAGAACTAATAATCCAGGATTTCTCCTAAAAGTATTCAAATCATCTTCATAATCAGTTTTGGTTAGAATTTTGAAGAGTACTTTTACTGGGTAAAAGCACTTTTCATCCATTCACAAACCCCCTTACAATGCAGCATAAATACCTAGTTGGTCTTTTGTAATACTATCATCAATATCATCCTTGATGCTTCGTTATATATCTAGCCTAGGTTCTTTATAATAGAATGGCTATAGGAAACCTGGCAAGAAAGAAATGGAAGAAGTCTTCAAATATTCTCTCTGAGGGGGTTTTCATTTTAATTTCTCATTGAAGTTCGGGACAATTTCCTGACTCAGTACATTTGACTTGGTTGTCAAGTAACTCGCAAAATATTAAATCTTATATAGGTGACTATTATTCTGAGAACCCACATCGGTTGGGGAGGAGAACGAAACATTTTTATAAGGGTGTGGAAACATTTCCTTAATAGATGCGTTTTAAAATCTTGAGGGGAAGCCTGGAAGGAAAGCCCAAAAAGGACACTATCTGCTAGCGGTGTGCTTGAACGGTTACAATCTTGACTTGACCCATTACTTTTGAACCATTTATTACCTTCATGACCCTTATTATCCATTAGGCCAACCTATTGGAGTTACTATTTGGAGTAATATTAGGTCATTAAGTTAGACATTGGTTAAAGAAGTTGGTTAACTGGGGTGAACAGAAATGGGGTGAACAGAAATAGAGTGGATGAGAGAGGCAAAGTTGGGTGGAATTTTAGAATAGATATGTAATAGCCCAAACCTACTGTCAGGAGATATTGTCCTTTTTGGGTTTCCCCTCACCGTTTTTAAAATGGCATTAGAGGCAGTAATCGGGCGGTTGTGCCAGCGAGGACGCTGGGCCTCCAAAGAGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGGGAAAGAAACATTCCATATCAGGGTGTGGAAACCTCTCTCTAGTAAACGCGTTTTAAAACTGTGAGGCTGACGATGATACGTAATGGGCCAAAGTAGACAATATCTGCTAATGGTGGGCTTGGCCGTTACAAAGTATTTTAAGAGTCTCGGCCTCTCAAAGTGTTTGGCAATTGTAAGTTCCCCTTTTATATTGCAATGTAACAAAATTTCAGTGTTCTGTTCAGTCCATCTCTATTGCAAGATTAAGTTCCTTTTACAGATCTAATATTGAGGTTTTACAGGTATCCAGGAACTGGCGAATATGACAAGTTCTATGGCGAGGGAGTTTATCACTGTGCGGGATGTGGAGCACCCCTTTATCAATCGAGCACGAAATTCAACTCCGGCTGTGGTTGGCCAGCATTCTTCGACGGTATTCCTGGAGCAATTAAATCCACTGTGAGTGTTTGACCTCCATCATTCTTTGTGTGTAGGAGTTAAGTCTAGTATCTCTTAGTAGCTCATGTTATTTTTCTCTGCAATATTGCAATGTATCTCTCTAGCAGAGGAGCTCCTTTACTGAAAGGAGGCTCCTTTTGACCGGAGGGAAGCATGGGAAGAATAAACTAGATGCACTCCCGAGTCTAAACTAATGACACAACATGTGTTATTGGACAAATGTTGTCTGATTTGCTATGACGTGACAGACAAATGATGAAAGGAAGTAGACAACTAGCTAGAATAGATAGAATGTGAAACATACACGACCAACATTCGATTGTTTCATGTGTATTTCGTCTTACCACATCGACTAATGTATGTCCAATATCATAAAGGGCCTAGAGAGAATGAGTTCAAGCCACAGTGGCCACTTACCTAGAGTTTAGTATCCTACTAGTTACCTTAACAACCAAATATGGTGAATACCTAGAGTTGAGTATCCTATGAGTTACCTTAACAGCCAAATATGGTGACTACCTACCTCGAGTTTAGTATCGTACGAGTTACCTTAACAACCAAATATGGTGGCCACCTACCTGGAGTTTAGTGTCCTACAAGTTACCTTAACAACCAAATATGATAAAGTCAGACTCATGCACAATCTGACCCGAACATTCACAAATATTAAAAAGATATTTAAAAAACCGAACACATGTCCCATTAGCACATCAGTCATCATTTTGTTGACAACAAGAACGAACAACAATTCAAAATTCGTAGATGTTATGTTATGTACAAGTGTTCCATTTTTGTCTCTCAAAGTTATCCTCCAGCAACATCCTAGAGTTGAAATAGTGACATTACTTTTGTGATAACCAGCCTGACCCTGATGGGATGAGGACTGAAATCACATGTGCTGCTTGCGGTGGTCATCTGGGTCACGTATTTAAAGGAGAAGGCTTTCCAACACCCACAAACGAGCGCCATTGTGTCAACAGTATTTCACTCAAGTTTTCTCCTTCTCCATGATTTCTTGTTTCAAATCTCTATGGTTTTTTCTTTTTTGAATCTCGTGATTGTATTTATATAACCTGAACGCAATAAGCTCTTTACGACTTCAAAAGGTGAACAAGGAGAAGGGAAGGAAAAGAGCTTGTTTTTCTTCCATTCTATGTACATTTTGTGACGTGAAAGTAAATTTCTTCCCTCTCTATTCTCGATCTCGATCTTGATATGCTTTCATTGTGTCAATAGTATTTCACTCAAGTTTTCTCC GGAAACCCTCATCGGCGCTTTCTCTGCAAAATAATCTTTCCCTCTCTCTCTCTCTCTCTCTCATGGGCTTTTCCATTCTCCGAGCTTCCCCTCTCTCCTCCTCCCGAGCTCTTCTCTGCAACCCTACGCCCGTCGCCGCTCTTCCCATCCTCCGTCTTCCTCTCCGCTCTTCTCACCATTCATCGCTCTCCCTAACCCATTTCGAATCATCTTCTTCCTCGGCGAATCGTACTTCTTTTGCCGTTTCTGCTACTCGATTTGGTGGTGCTTTTGCTTTGAGACCTCGTAGCTTCCGTCGGGGCCGTGTTTTGGCTATGTCTTCGCCTAATTCAGTCCAGAAATCGGAGGAGGAGTGGCGAGCCATCCTCTCGCCCGAGCAGTTTCGAATTCTCCGGCAAAAAGGAACTGAGTATCCAGGAACTGGCGAATATGACAAGTTCTATGGCGAGGGAGTTTATCACTGTGCGGGATGTGGAGCACCCCTTTATCAATCGAGCACGAAATTCAACTCCGGCTGTGGTTGGCCAGCATTCTTCGACGGTATTCCTGGAGCAATTAAATCCACTCCTGACCCTGATGGGATGAGGACTGAAATCACATGTGCTGCTTGCGGTGGTCATCTGGGTCACGTATTTAAAGGAGAAGGCTTTCCAACACCCACAAACGAGCGCCATTGTGTCAACAGTATTTCACTCAAGTTTTCTCCTTCTCCATGATTTCTTGTTTCAAATCTCTATGGTTTTTTCTTTTTTGAATCTCGTGATTGTATTTATATAACCTGAACGCAATAAGCTCTTTACGACTTCAAAAGGTGAACAAGGAGAAGGGAAGGAAAAGAGCTTGTTTTTCTTCCATTCTATGTACATTTTGTGACGTGAAAGTAAATTTCTTCCCTCTCTATTCTCGATCTCGATCTTGATATGCTTTCATTGTGTCAATAGTATTTCACTCAAGTTTTCTCC ATGGGCTTTTCCATTCTCCGAGCTTCCCCTCTCTCCTCCTCCCGAGCTCTTCTCTGCAACCCTACGCCCGTCGCCGCTCTTCCCATCCTCCGTCTTCCTCTCCGCTCTTCTCACCATTCATCGCTCTCCCTAACCCATTTCGAATCATCTTCTTCCTCGGCGAATCGTACTTCTTTTGCCGTTTCTGCTACTCGATTTGGTGGTGCTTTTGCTTTGAGACCTCGTAGCTTCCGTCGGGGCCGTGTTTTGGCTATGTCTTCGCCTAATTCAGTCCAGAAATCGGAGGAGGAGTGGCGAGCCATCCTCTCGCCCGAGCAGTTTCGAATTCTCCGGCAAAAAGGAACTGAGTATCCAGGAACTGGCGAATATGACAAGTTCTATGGCGAGGGAGTTTATCACTGTGCGGGATGTGGAGCACCCCTTTATCAATCGAGCACGAAATTCAACTCCGGCTGTGGTTGGCCAGCATTCTTCGACGGTATTCCTGGAGCAATTAAATCCACTCCTGACCCTGATGGGATGAGGACTGAAATCACATGTGCTGCTTGCGGTGGTCATCTGGGTCACGTATTTAAAGGAGAAGGCTTTCCAACACCCACAAACGAGCGCCATTGTGTCAACAGTATTTCACTCAAGTTTTCTCCTTCTCCATGA MGFSILRASPLSSSRALLCNPTPVAALPILRLPLRSSHHSSLSLTHFESSSSSANRTSFAVSATRFGGAFALRPRSFRRGRVLAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPGTGEYDKFYGEGVYHCAGCGAPLYQSSTKFNSGCGWPAFFDGIPGAIKSTPDPDGMRTEITCAACGGHLGHVFKGEGFPTPTNERHCVNSISLKFSPSP
BLAST of CmaCh19G004990 vs. Swiss-Prot
Match: MSRB2_ARATH (Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.1e-65 Identity = 122/169 (72.19%), Postives = 138/169 (81.66%), Query Frame = 1
BLAST of CmaCh19G004990 vs. Swiss-Prot
Match: MSRB3_ORYSJ (Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB3 PE=2 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.2e-63 Identity = 136/218 (62.39%), Postives = 148/218 (67.89%), Query Frame = 1
BLAST of CmaCh19G004990 vs. Swiss-Prot
Match: MSRB5_ORYSJ (Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp. japonica GN=MSRB5 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 7.2e-62 Identity = 101/125 (80.80%), Postives = 117/125 (93.60%), Query Frame = 1
BLAST of CmaCh19G004990 vs. Swiss-Prot
Match: MSRB3_ARATH (Peptide methionine sulfoxide reductase B3 OS=Arabidopsis thaliana GN=MSRB3 PE=2 SV=2) HSP 1 Score: 237.3 bits (604), Expect = 1.6e-61 Identity = 105/134 (78.36%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of CmaCh19G004990 vs. Swiss-Prot
Match: MSRB5_ARATH (Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana GN=MSRB5 PE=1 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59 Identity = 99/131 (75.57%), Postives = 116/131 (88.55%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TrEMBL
Match: A0A0A0K2R8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067530 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 9.1e-96 Identity = 180/216 (83.33%), Postives = 185/216 (85.65%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TrEMBL
Match: A0A067KVP5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09906 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.2e-73 Identity = 141/218 (64.68%), Postives = 171/218 (78.44%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TrEMBL
Match: M5W8E2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009769mg PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.1e-72 Identity = 142/217 (65.44%), Postives = 167/217 (76.96%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TrEMBL
Match: I1ME37_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G061100 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.0e-71 Identity = 143/220 (65.00%), Postives = 165/220 (75.00%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TrEMBL
Match: B9GJ03_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29320g PE=4 SV=2) HSP 1 Score: 275.4 bits (703), Expect = 5.9e-71 Identity = 140/220 (63.64%), Postives = 165/220 (75.00%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TAIR10
Match: AT4G21860.1 (AT4G21860.1 methionine sulfoxide reductase B 2) HSP 1 Score: 251.1 bits (640), Expect = 6.1e-67 Identity = 122/169 (72.19%), Postives = 138/169 (81.66%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TAIR10
Match: AT4G04800.1 (AT4G04800.1 methionine sulfoxide reductase B3) HSP 1 Score: 237.3 bits (604), Expect = 9.1e-63 Identity = 105/134 (78.36%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TAIR10
Match: AT4G04830.1 (AT4G04830.1 methionine sulfoxide reductase B5) HSP 1 Score: 231.1 bits (588), Expect = 6.5e-61 Identity = 99/131 (75.57%), Postives = 116/131 (88.55%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TAIR10
Match: AT4G04810.1 (AT4G04810.1 methionine sulfoxide reductase B4) HSP 1 Score: 214.2 bits (544), Expect = 8.2e-56 Identity = 91/126 (72.22%), Postives = 109/126 (86.51%), Query Frame = 1
BLAST of CmaCh19G004990 vs. TAIR10
Match: AT4G21850.1 (AT4G21850.1 methionine sulfoxide reductase B9) HSP 1 Score: 212.2 bits (539), Expect = 3.1e-55 Identity = 92/128 (71.88%), Postives = 107/128 (83.59%), Query Frame = 1
BLAST of CmaCh19G004990 vs. NCBI nr
Match: gi|449438264|ref|XP_004136909.1| (PREDICTED: peptide methionine sulfoxide reductase B5 [Cucumis sativus]) HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95 Identity = 180/216 (83.33%), Postives = 185/216 (85.65%), Query Frame = 1
BLAST of CmaCh19G004990 vs. NCBI nr
Match: gi|659110198|ref|XP_008455101.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Cucumis melo]) HSP 1 Score: 356.3 bits (913), Expect = 3.8e-95 Identity = 180/216 (83.33%), Postives = 185/216 (85.65%), Query Frame = 1
BLAST of CmaCh19G004990 vs. NCBI nr
Match: gi|694384924|ref|XP_009368332.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Pyrus x bretschneideri]) HSP 1 Score: 285.8 bits (730), Expect = 6.3e-74 Identity = 143/217 (65.90%), Postives = 168/217 (77.42%), Query Frame = 1
BLAST of CmaCh19G004990 vs. NCBI nr
Match: gi|802611570|ref|XP_012074564.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Jatropha curcas]) HSP 1 Score: 283.5 bits (724), Expect = 3.1e-73 Identity = 141/218 (64.68%), Postives = 171/218 (78.44%), Query Frame = 1
BLAST of CmaCh19G004990 vs. NCBI nr
Match: gi|720082277|ref|XP_010242540.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Nelumbo nucifera]) HSP 1 Score: 280.8 bits (717), Expect = 2.0e-72 Identity = 141/216 (65.28%), Postives = 164/216 (75.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|