Cla012950 (gene) Watermelon (97103) v1

Overview
NameCla012950
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPeptide methionine sulfoxide reductase msrB (AHRD V1 *-*- B6T2C6_MAIZE); contains Interpro domain(s) IPR002579 Methionine sulphoxide reductase B
LocationChr9 : 21632028 .. 21635108 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTTTCAATTCTCCGAACTTCCCCTCCTCTCTCTTCCTCCCGAGCTTTTCTCTGCAACCCCACACCCTTCCCTGCTTTTCCCATTCTTCCCCTTCCTCTCCACTCTTCGCCCCATTCATTGCTCTTCAAAACCCACTTCCAATCATCTTCTTCCTCGCTCATTCGTACTTCTTTCCCAATTTCTGCAACTCCATTCTGTGGGGCTTTTGCTCTGAGACCCCGTGCCTTCCGTCGGGGCCGCGTTTTTGCCATGTCTTCGCCTAATTCAGTCCAGAAATCGGAGGAGGAGTGGCGCGCCATCCTCTCGCCGGAGCAGTTTCGAATTCTCCGGCAAAAAGGAACAGAGTAAGCACCCGTTCGATTGGATTTTATTGCTTTTTTTTAGGTTTAGTTGATTTCTCCAATTCTGAGTTTGGTTGTTGATTGGGAATTGCAGCTTGGATGAACTTTTTTTAAGGAAACCATCTTATGATTTTCCTTTGAATTGAAAACTGAATCATTTGACACAACGGCTGTTCCTTTTTATGTCTCTCTCTCCTGCAATCTAGCTCTCACTTCCTCTTTTGAAATTAATATGCTCTTTTCTTGCATTATTTGTATTTTAGTTAGTCCATTTCGAACCATAAGTTCCATAATTGCATAATTTCTTACTTTCTTTGTCAATCTACTTCAAATTAGCAACAAATGCTATGGAAACTTAGGGTGAGTTAGGGATTATTTTTGACAAAAGTGCTTTTTTAGTACAGCTCCTTCTGCAAGTACCTATAGAAGATTTTATATATATATATATAGTGTCTCGACCAGTTTACATGCACCTCGACTAAACTCACGGAACATGGCCCCCATGCATTGGCTTTTAGAAGAATATTAATTCGTGATTTCTCCTTAAAGCACTTTAGAATCATTTTCAAGTTTTGATTAAAATTTTGATGGCTAATTTTAATGTGTAAAAGCACTTTTCATCCATCTTAAAAACATCCAAACCTCCCCCCCCTAGAATGCAGCATAAATACCCAATTGGCCTTATAAGACTCATGAATATCATCCTTGATGCTTTATTAAATATCTAGCCGAGGTTCTTTATCATAGATGGCTGTATGAAATCTGGAAAGAAAGAAATGAAGGATGTCTTCAAATATTCTCTCTGATGCGGTTTTCAATTTAACCTCTTATTGGAATTTTTCTAATACATTTGCTTGTCAAAATAACTTGTAGGATATTAAACCTTAGGTAAATGGCCATCGTGTCTTGAACACATTCCCTCTAAGCCGTTTATTATTTACATATTAACCACTAGGCCAAATATTAGGAGTATGTGAGAGCTCTAGTTAGAAATATATTAGGATCCAATTTGTTAGGATACCTCCTAATAAGAAAACTCAAGAACAACAAAGAACACCCGTAGCACTAAAAGATAGGAACATATATTGCAATATCAATGAAGAAACTACAATATCATAGCCTTTCGAGATGGCTATACTCTTCCAAATTTCCACAAGGGAAATTCCTTTCAAAATGAAGCACATCCTCTAAGGACTCTAACACGCTATACTTATAACCAAGGCACCTTGGCTAATGACCATATGCACTTACTATTATCCTACTAATATTCTGAGTATATCTCTAACTAGGGCTCTCACATATTTGGAGATCGGTAGTACATGTTCGTCATTAGACACTAGTTAAAGAAGTTGGTTAGTAAAGGGTGAACACAAATAGAGTGGGTGAGAGGGGCCAAGTTAGGCAGAATTTCAGAAGGGCTATTTTGAGAGAGTCTAGACCTCTCAAGGTGTTTAGCAATTGTAAGTTTCCTTTTTCAATGGAATATAATTTCTGTGTTATTTTCTGTCAATCTCTTTTGCAAGATCAACTTCCTTTACCAGATCTAATATTGGGGTATTACAGGTATCCAGGAACTGGTACATATGACAAGTTCTATGGCGAGGGAGTTTATCACTGTGCGGGATGTGGGGCACCCCTTTATAGGTCAAACACAAAATTTAACTCCGGTTGTGGTTGGCCAGCATTCTTCGACGGTATTCCTGGAGCCATTAAACGCACTGTGAGTTTTTAACCCCCATCATTCTTTGTGTGTAGGAGTTAGGACTAGGATCTTTTAGGAGCTCGTTATATTTTTCTATATGATCTACCATTTTCTCACTTCTCTGCAATATTGCAATGGATCTCTAACCGAGAGGAGTTCCTTTATTGAAAGTAGGCTCCTTCTGACCAGAGGGAGACGGAACATGTGTATTGAACAAATGTTGTCTAATTTGATACGACATGAAAGTCAAATGGCAGAAGAAAGTAGAGAGCTAGATAGAATAAATAGGATGTGAAACATACACAACCAACATATCAGATTCCTTTTATGGATTGTGTCATGTGTATTGTGTCATACCAAATCGATTATGTACGTCATCGATCCATTTTATGATGAATAAGCAAATAATGGGATTTGTTTGATAAATGGGAAAAAATGCTTAGGGGTGGAAATGAGAGAATGTCTACAATACCCGGGTTTAATCATATACAATTTGAAGGGTTTTGTAGGTTCATTGATCATGGCTTAACAGAAGAACTTTCTAAGTTTCCAAAAATTGAAGATTTAGATCAAGAAATATGTCCAATATCATAAAAGGAATGAATTCAAGCCATGGTAGCCACTTACCTGAAATTTAATATTCCTATGAGTTACTTTGGCAACCAAATGTAGTAGGGTTAGGTAGTTGTCCACGAGACTAGTCAAGGTATGCACAGTTGGTCCGAACATTCACAGATATTAAAAGAAACGAAACTAACATATGCGTAACAAGGCCATATCATCGATTAGTTGACAGCAAGAATGACATAGAACCACAATTCAAAGTTTTCCTCCAGCAACATTCTAGAGTTGAAATAATGACATTGTTTTTGTAATGACCAGCCTGACCCTGATGGGATGAGGACTGAAATCACATGTGCTGCTTGTGATGGTCATCTGGGTCATGTTTTTAAGGGAGAAGGCTTTCCAACACCCACAAATGAGCGCCATTGTGTCAATAGTATTTCACTCAAGTTTTCTCCTTCTCCATGA

mRNA sequence

ATGGGCTTTTCAATTCTCCGAACTTCCCCTCCTCTCTCTTCCTCCCGAGCTTTTCTCTGCAACCCCACACCCTTCCCTGCTTTTCCCATTCTTCCCCTTCCTCTCCACTCTTCGCCCCATTCATTGCTCTTCAAAACCCACTTCCAATCATCTTCTTCCTCGCTCATTCGTACTTCTTTCCCAATTTCTGCAACTCCATTCTGTGGGGCTTTTGCTCTGAGACCCCGTGCCTTCCGTCGGGGCCGCGTTTTTGCCATGTCTTCGCCTAATTCAGTCCAGAAATCGGAGGAGGAGTGGCGCGCCATCCTCTCGCCGGAGCAGTTTCGAATTCTCCGGCAAAAAGGAACAGAGTATCCAGGAACTGGTACATATGACAAGTTCTATGGCGAGGGAGTTTATCACTGTGCGGGATGTGGGGCACCCCTTTATAGGTCAAACACAAAATTTAACTCCGGTTGTGGTTGGCCAGCATTCTTCGACGGTATTCCTGGAGCCATTAAACGCACTCCTGACCCTGATGGGATGAGGACTGAAATCACATGTGCTGCTTGTGATGGTCATCTGGGTCATGTTTTTAAGGGAGAAGGCTTTCCAACACCCACAAATGAGCGCCATTGTGTCAATAGTATTTCACTCAAGTTTTCTCCTTCTCCATGA

Coding sequence (CDS)

ATGGGCTTTTCAATTCTCCGAACTTCCCCTCCTCTCTCTTCCTCCCGAGCTTTTCTCTGCAACCCCACACCCTTCCCTGCTTTTCCCATTCTTCCCCTTCCTCTCCACTCTTCGCCCCATTCATTGCTCTTCAAAACCCACTTCCAATCATCTTCTTCCTCGCTCATTCGTACTTCTTTCCCAATTTCTGCAACTCCATTCTGTGGGGCTTTTGCTCTGAGACCCCGTGCCTTCCGTCGGGGCCGCGTTTTTGCCATGTCTTCGCCTAATTCAGTCCAGAAATCGGAGGAGGAGTGGCGCGCCATCCTCTCGCCGGAGCAGTTTCGAATTCTCCGGCAAAAAGGAACAGAGTATCCAGGAACTGGTACATATGACAAGTTCTATGGCGAGGGAGTTTATCACTGTGCGGGATGTGGGGCACCCCTTTATAGGTCAAACACAAAATTTAACTCCGGTTGTGGTTGGCCAGCATTCTTCGACGGTATTCCTGGAGCCATTAAACGCACTCCTGACCCTGATGGGATGAGGACTGAAATCACATGTGCTGCTTGTGATGGTCATCTGGGTCATGTTTTTAAGGGAGAAGGCTTTCCAACACCCACAAATGAGCGCCATTGTGTCAATAGTATTTCACTCAAGTTTTCTCCTTCTCCATGA

Protein sequence

MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSFPISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPGTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEITCAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPSP
Homology
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BLAST of Cla012950 vs. Swiss-Prot
Match: MSRB2_ARATH (Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-65
Identity = 117/162 (72.22%), Postives = 129/162 (79.63%), Query Frame = 1 

Query: 57  RTSFPISATPFCGAFALRPRAFRRGRVFAM--SSPNSVQKSEEEWRAILSPEQFRILRQK 116
           R     S++P   +F    R F  GR+ AM  S+P SV K EEEWRAILSPEQFRILRQK
Sbjct: 38  RNLLRFSSSPL--SFPSLRRGFHGGRIVAMGSSAPESVNKPEEEWRAILSPEQFRILRQK 97

Query: 117 GTEYPGTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDG 176
           GTEYPGTG Y+K + +G+Y CAGCG PLY+S TKF+SGCGWPAFFDG+PGAI RTPDPDG
Sbjct: 98  GTEYPGTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTPDPDG 157

Query: 177 MRTEITCAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSP 217
            R EITCAAC GHLGHVFKGEGFPTPT+ERHCVNSISLKF+P
Sbjct: 158 RRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISLKFTP 197

[Close]
BLAST of Cla012950 vs. Swiss-Prot
Match: MSRB3_ORYSJ (Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB3 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.8e-63
Identity = 127/210 (60.48%), Postives = 140/210 (66.67%), Query Frame = 1 

Query: 21  NPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSFPISATPFCG-----AFALRP 80
           +P P P  P+   PL +     L +    +++      +   S  P C      A   R 
Sbjct: 15  HPHPHPGAPLAARPLSALASFFLARPSSTAAAPPPRHVTLSCSR-PHCNHNQWAASRCRG 74

Query: 81  RAFRRGR--VFAMSS------PNSVQKSEEEWRAILSPEQFRILRQKGTEYPGTGTYDKF 140
            A RR    V AMSS      P SVQKSEEEW AILSPEQFRILR KGTEYPGTG YDK 
Sbjct: 75  TAGRRRLQVVVAMSSSAPPPPPGSVQKSEEEWEAILSPEQFRILRLKGTEYPGTGEYDKL 134

Query: 141 YGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEITCAACDGH 200
           + EGVY CAGCG PLY+S+TKFNSGCGWPAF++G PGAI RTPDPDG R EITCAAC GH
Sbjct: 135 FAEGVYECAGCGTPLYKSSTKFNSGCGWPAFYEGFPGAIARTPDPDGRRIEITCAACGGH 194

Query: 201 LGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           LGHVFKGEGF TPT+ERHCVNSISLKF P+
Sbjct: 195 LGHVFKGEGFNTPTDERHCVNSISLKFIPA 223

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BLAST of Cla012950 vs. Swiss-Prot
Match: MSRB5_ORYSJ (Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp. japonica GN=MSRB5 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-60
Identity = 100/125 (80.00%), Postives = 113/125 (90.40%), Query Frame = 1 

Query: 93  QKSEEEWRAILSPEQFRILRQKGTEYPGTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSG 152
           Q+S+EEWRA+LSPEQFRILR KGTE PGTG Y+KFYG+GVY+CAGCG PLY+S TKF+SG
Sbjct: 11  QRSDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSG 70

Query: 153 CGWPAFFDGIPGAIKRTPDPDGMRTEITCAACDGHLGHVFKGEGFPTPTNERHCVNSISL 212
           CGWPAFF+G+PGAI RTPDPDG R EITCAAC GHLGHVFKGEGF TPT+ERHCVNS+S+
Sbjct: 71  CGWPAFFEGLPGAINRTPDPDGRRVEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSI 130

Query: 213 KFSPS 218
           KF+P+
Sbjct: 131 KFTPA 135

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BLAST of Cla012950 vs. Swiss-Prot
Match: MSRB3_ARATH (Peptide methionine sulfoxide reductase B3 OS=Arabidopsis thaliana GN=MSRB3 PE=2 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 6.8e-60
Identity = 104/133 (78.20%), Postives = 112/133 (84.21%), Query Frame = 1 

Query: 85  AMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPGTGTYDKFYGEGVYHCAGCGAPLYR 144
           AM++P SVQK +EEWRAILSPEQFRILRQKGTEYPGTG Y  F  EGVY C GC APLY+
Sbjct: 40  AMAAPGSVQKGDEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDKEGVYGCVGCNAPLYK 99

Query: 145 SNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEITCAACDGHLGHVFKGEGFPTPTNER 204
           S TKFN+GCGWPAFF+GIPGAI RT DPDG R EI CA C GHLGHVFKGEGF TPT+ER
Sbjct: 100 STTKFNAGCGWPAFFEGIPGAITRTTDPDGRRIEINCATCGGHLGHVFKGEGFATPTDER 159

Query: 205 HCVNSISLKFSPS 218
           HCVNS+SLKF+P+
Sbjct: 160 HCVNSVSLKFTPA 172

[Close]
BLAST of Cla012950 vs. Swiss-Prot
Match: MSRB5_ARATH (Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana GN=MSRB5 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.8e-60
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 1 

Query: 87  SSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPGTGTYDKFYGEGVYHCAGCGAPLYRSN 146
           +SP  VQK+EEEWRA+LSPEQFRILRQKGTE PGTG YDKF+ EG++ C GC  PLY+S 
Sbjct: 3   ASPLVVQKTEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKST 62

Query: 147 TKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEITCAACDGHLGHVFKGEGFPTPTNERHC 206
           TKF+SGCGWPAFF+G+PGAI RTPDPDG RTEITCAACDGHLGHVFKGEG+  PT+ERHC
Sbjct: 63  TKFDSGCGWPAFFEGLPGAINRTPDPDGRRTEITCAACDGHLGHVFKGEGYGNPTDERHC 122

Query: 207 VNSISLKFSPS 218
           VNS+S+ F+P+
Sbjct: 123 VNSVSISFNPA 133

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BLAST of Cla012950 vs. TrEMBL
Match: A0A0A0K2R8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067530 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.3e-97
Identity = 183/217 (84.33%), Postives = 185/217 (85.25%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSF 60
           MGFSILRTSP LSSSRAFL NPTPFPA          SPHS  FKTHFQSSS S   TSF
Sbjct: 1   MGFSILRTSP-LSSSRAFLSNPTPFPA----------SPHSF-FKTHFQSSSLSPNPTSF 60

Query: 61  PISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120
            IS T F GAF LR R FR+ RV AMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG
Sbjct: 61  AISPTRFGGAFPLRSRGFRQSRVLAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120

Query: 121 TGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEIT 180
           TG YDKFYGEGVYHCAGC APLY+SNTKFNSGCGWPAFFDGIPGAIK TPDPDGMRTEIT
Sbjct: 121 TGIYDKFYGEGVYHCAGCEAPLYKSNTKFNSGCGWPAFFDGIPGAIKSTPDPDGMRTEIT 180

Query: 181 CAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           CAAC GHLGHVFKGEGF TPTNERHCVNSISLKFSPS
Sbjct: 181 CAACGGHLGHVFKGEGFRTPTNERHCVNSISLKFSPS 205

[Close]
BLAST of Cla012950 vs. TrEMBL
Match: I1ME37_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G061100 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.6e-74
Identity = 145/220 (65.91%), Postives = 166/220 (75.45%), Query Frame = 1 

Query: 1   MGFSILRT---SPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIR 60
           MGF+ILRT   S P+SSS++           PI    L SSP ++           S+  
Sbjct: 1   MGFNILRTTSISTPISSSKSK----------PIFSTLLRSSPSTIF-------PPKSVTP 60

Query: 61  TSFPISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTE 120
           T+  +SATPF   F L P+   RG + AM++P S++KSEEEWRAILSPEQFRILRQKGTE
Sbjct: 61  TTLFVSATPF---FTLHPKLGFRGGIVAMAAPGSLRKSEEEWRAILSPEQFRILRQKGTE 120

Query: 121 YPGTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRT 180
           +PGTG YDKFY EGVY+CAGCG PLYRS TKFNSGCGWPAF++GIPGAI R PDPDGMRT
Sbjct: 121 FPGTGEYDKFYEEGVYNCAGCGTPLYRSITKFNSGCGWPAFYEGIPGAINRNPDPDGMRT 180

Query: 181 EITCAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           EITCAAC GHLGHVFKGEGFPTPTNERHCVNSISLKF+P+
Sbjct: 181 EITCAACGGHLGHVFKGEGFPTPTNERHCVNSISLKFAPA 200

[Close]
BLAST of Cla012950 vs. TrEMBL
Match: A0A067KVP5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09906 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.8e-74
Identity = 143/218 (65.60%), Postives = 167/218 (76.61%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLF-KTHFQSSSSSLIRTS 60
           MGF+I+++SP +SS++  L   TP P       P HS   S+ F K++F+ SS  L+  S
Sbjct: 1   MGFNIIKSSP-ISSTKTILFATTPKPTLFKPVSPPHSLSTSISFNKSNFRFSSPELVPIS 60

Query: 61  FPISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYP 120
             +S   F G+F    R FR G V AM++P SVQKS+EEWRAILS EQFRILR+KGTEYP
Sbjct: 61  LSVSG--FSGSFYKSNRTFR-GSVIAMAAPGSVQKSDEEWRAILSREQFRILREKGTEYP 120

Query: 121 GTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEI 180
           GTG YDKF+ EGVY CAGCG PLY+S TKFNSGCGWPAFF+G+PGAI RTPDPDG R EI
Sbjct: 121 GTGEYDKFFEEGVYKCAGCGTPLYKSTTKFNSGCGWPAFFEGLPGAINRTPDPDGRRIEI 180

Query: 181 TCAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           TCAAC GHLGHVFKGEGFPTPT+ERHCVNSISLKF P+
Sbjct: 181 TCAACGGHLGHVFKGEGFPTPTDERHCVNSISLKFVPA 214

[Close]
BLAST of Cla012950 vs. TrEMBL
Match: B9GJ03_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29320g PE=4 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 3.7e-73
Identity = 143/217 (65.90%), Postives = 159/217 (73.27%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSF 60
           MGF+IL  SP  S+       PT    FP L   L S P+S   KTHF+ SS     T+ 
Sbjct: 1   MGFNILIPSPLPSTKTILYTKPT----FPKLVSALQSIPNSFT-KTHFKFSSPK--PTAH 60

Query: 61  PISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120
            ISA  F  +     R FR G V AM++P SVQKSE+EWRA+LSPEQFRILRQK TEYPG
Sbjct: 61  SISAAGFVVSIYQTKRQFRGGGVIAMAAPGSVQKSEDEWRAVLSPEQFRILRQKDTEYPG 120

Query: 121 TGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEIT 180
           TG YDK + EGVY CAGCG PLYRS TKFNSGCGWPAF++G+PGAI RTPDPDG R EIT
Sbjct: 121 TGEYDKLFEEGVYKCAGCGTPLYRSTTKFNSGCGWPAFYEGLPGAINRTPDPDGRRIEIT 180

Query: 181 CAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           C AC GHLGHVFKGEGFPTPTNERHCVNSISLKF+P+
Sbjct: 181 CTACGGHLGHVFKGEGFPTPTNERHCVNSISLKFAPA 210

[Close]
BLAST of Cla012950 vs. TrEMBL
Match: M5W8E2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009769mg PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-72
Identity = 141/217 (64.98%), Postives = 162/217 (74.65%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSF 60
           MG  +L++SP  SSS+  + NPT       L  P   +P SL F+THF++     I +  
Sbjct: 59  MGSHVLKSSPLSSSSKTIIFNPTITLTITKLLHPPKPAPTSL-FRTHFRALPPRPISSVI 118

Query: 61  PISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120
           P  A    G+     R+FR G V AM++P SVQKSEEEWRA+LS EQFRILRQKGTEYPG
Sbjct: 119 P--AIGVGGSLFQSKRSFRGGVVVAMAAPGSVQKSEEEWRAVLSSEQFRILRQKGTEYPG 178

Query: 121 TGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEIT 180
           TG YDKF+ EGVY CAGCG PLYRS TKFNSGCGWPAF++G+PGAI   PDPDGMRTEIT
Sbjct: 179 TGEYDKFFEEGVYGCAGCGTPLYRSTTKFNSGCGWPAFYEGLPGAINYNPDPDGMRTEIT 238

Query: 181 CAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           CAAC GHLGHVFKGEGF TPT+ERHCVNSISLKFSP+
Sbjct: 239 CAACGGHLGHVFKGEGFRTPTDERHCVNSISLKFSPA 272

[Close]
BLAST of Cla012950 vs. NCBI nr
Match: gi|659110198|ref|XP_008455101.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 9.4e-102
Identity = 188/217 (86.64%), Postives = 190/217 (87.56%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSF 60
           MGFSILRTSP LSSSRAFL NPTPFPA       LHSSPH LLFKTHFQSS        F
Sbjct: 1   MGFSILRTSP-LSSSRAFLSNPTPFPAL------LHSSPHFLLFKTHFQSS--------F 60

Query: 61  PISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120
            ISATPF GAFALRPR FR+GRV AMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG
Sbjct: 61  AISATPFAGAFALRPRRFRQGRVLAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120

Query: 121 TGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEIT 180
           TG YDKFYGEGVYHCAGC APLY+SNTKFNSGCGWPAFFDGIPGAIK TPDPDGMRTEIT
Sbjct: 121 TGIYDKFYGEGVYHCAGCEAPLYKSNTKFNSGCGWPAFFDGIPGAIKSTPDPDGMRTEIT 180

Query: 181 CAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           CAAC GHLGHVFKGEGF TPTNERHCVNSISLKFSPS
Sbjct: 181 CAACGGHLGHVFKGEGFRTPTNERHCVNSISLKFSPS 202

[Close]
BLAST of Cla012950 vs. NCBI nr
Match: gi|449438264|ref|XP_004136909.1| (PREDICTED: peptide methionine sulfoxide reductase B5 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 9.1e-97
Identity = 183/217 (84.33%), Postives = 185/217 (85.25%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSF 60
           MGFSILRTSP LSSSRAFL NPTPFPA          SPHS  FKTHFQSSS S   TSF
Sbjct: 1   MGFSILRTSP-LSSSRAFLSNPTPFPA----------SPHSF-FKTHFQSSSLSPNPTSF 60

Query: 61  PISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120
            IS T F GAF LR R FR+ RV AMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG
Sbjct: 61  AISPTRFGGAFPLRSRGFRQSRVLAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120

Query: 121 TGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEIT 180
           TG YDKFYGEGVYHCAGC APLY+SNTKFNSGCGWPAFFDGIPGAIK TPDPDGMRTEIT
Sbjct: 121 TGIYDKFYGEGVYHCAGCEAPLYKSNTKFNSGCGWPAFFDGIPGAIKSTPDPDGMRTEIT 180

Query: 181 CAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           CAAC GHLGHVFKGEGF TPTNERHCVNSISLKFSPS
Sbjct: 181 CAACGGHLGHVFKGEGFRTPTNERHCVNSISLKFSPS 205

[Close]
BLAST of Cla012950 vs. NCBI nr
Match: gi|356554848|ref|XP_003545754.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Glycine max])

HSP 1 Score: 286.6 bits (732), Expect = 3.7e-74
Identity = 145/220 (65.91%), Postives = 166/220 (75.45%), Query Frame = 1 

Query: 1   MGFSILRT---SPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIR 60
           MGF+ILRT   S P+SSS++           PI    L SSP ++           S+  
Sbjct: 1   MGFNILRTTSISTPISSSKSK----------PIFSTLLRSSPSTIF-------PPKSVTP 60

Query: 61  TSFPISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTE 120
           T+  +SATPF   F L P+   RG + AM++P S++KSEEEWRAILSPEQFRILRQKGTE
Sbjct: 61  TTLFVSATPF---FTLHPKLGFRGGIVAMAAPGSLRKSEEEWRAILSPEQFRILRQKGTE 120

Query: 121 YPGTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRT 180
           +PGTG YDKFY EGVY+CAGCG PLYRS TKFNSGCGWPAF++GIPGAI R PDPDGMRT
Sbjct: 121 FPGTGEYDKFYEEGVYNCAGCGTPLYRSITKFNSGCGWPAFYEGIPGAINRNPDPDGMRT 180

Query: 181 EITCAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           EITCAAC GHLGHVFKGEGFPTPTNERHCVNSISLKF+P+
Sbjct: 181 EITCAACGGHLGHVFKGEGFPTPTNERHCVNSISLKFAPA 200

[Close]
BLAST of Cla012950 vs. NCBI nr
Match: gi|645263090|ref|XP_008237068.1| (PREDICTED: peptide methionine sulfoxide reductase B5 [Prunus mume])

HSP 1 Score: 285.8 bits (730), Expect = 6.3e-74
Identity = 142/217 (65.44%), Postives = 163/217 (75.12%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSSRAFLCNPTPFPAFPILPLPLHSSPHSLLFKTHFQSSSSSLIRTSF 60
           MG  +L++SP  SSS+  + NPT  P    L  P   +P SL F+THF++     I +  
Sbjct: 1   MGLHVLKSSPLSSSSKTIIFNPTITPTVTKLLHPPKPAPTSL-FRTHFRALPPRPISSVI 60

Query: 61  PISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTEYPG 120
           P  A    G+     R+FR G V AM++P SVQKSEEEWRA+LS EQFRILRQKGTEYPG
Sbjct: 61  P--AIGLGGSLFQSKRSFRGGVVVAMAAPGSVQKSEEEWRAVLSSEQFRILRQKGTEYPG 120

Query: 121 TGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRTEIT 180
           TG YDKF+ EGVY CAGCG PLYRS TKFNSGCGWPAF++G+PGAI   PDPDGMRTEIT
Sbjct: 121 TGEYDKFFEEGVYGCAGCGTPLYRSTTKFNSGCGWPAFYEGLPGAINYNPDPDGMRTEIT 180

Query: 181 CAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           CAAC GHLGHVFKGEGF TPT+ERHCVNSISLKFSP+
Sbjct: 181 CAACGGHLGHVFKGEGFRTPTDERHCVNSISLKFSPA 214

[Close]
BLAST of Cla012950 vs. NCBI nr
Match: gi|470108044|ref|XP_004290345.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 285.4 bits (729), Expect = 8.3e-74
Identity = 143/220 (65.00%), Postives = 165/220 (75.00%), Query Frame = 1 

Query: 1   MGFSILRTSPPLSSS--RAFLCNPTPFPAFP-ILPLPLHSSPHSLLFKTHFQSSSSSLIR 60
           MG  I R+S PLSSS  +  + NPT  P    +LP P + SP SL F+THF + S   I+
Sbjct: 1   MGLHIFRSSSPLSSSASKTIIFNPTTKPTLSNLLPRPSNPSPTSL-FRTHFTAFSPKPIK 60

Query: 61  TSFPISATPFCGAFALRPRAFRRGRVFAMSSPNSVQKSEEEWRAILSPEQFRILRQKGTE 120
            S    A  F G+     R+FR G V AM++P  VQKSEEEWRA+LSPEQFRILRQKGTE
Sbjct: 61  -SVITPAIGFGGSLQTTKRSFRGGVVVAMAAPGPVQKSEEEWRAVLSPEQFRILRQKGTE 120

Query: 121 YPGTGTYDKFYGEGVYHCAGCGAPLYRSNTKFNSGCGWPAFFDGIPGAIKRTPDPDGMRT 180
           YPGTG YDKF+ EGVY CAGCG PLY+S TKFNSGCGWPAF++G+PGAI   PD DGMR 
Sbjct: 121 YPGTGVYDKFFEEGVYTCAGCGTPLYKSTTKFNSGCGWPAFYEGLPGAINSVPDRDGMRV 180

Query: 181 EITCAACDGHLGHVFKGEGFPTPTNERHCVNSISLKFSPS 218
           EITCAAC GHLGHVFKGEGF TPT+ERHCVNS+SLKF+P+
Sbjct: 181 EITCAACGGHLGHVFKGEGFRTPTDERHCVNSVSLKFTPA 218

The following BLAST results are available for this feature:
BLAST of Cla012950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MSRB2_ARATH4.1e-6572.22Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana... [more]
MSRB3_ORYSJ3.8e-6360.48Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. ... [more]
MSRB5_ORYSJ1.8e-6080.00Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp. japonica GN=MSR... [more]
MSRB3_ARATH6.8e-6078.20Peptide methionine sulfoxide reductase B3 OS=Arabidopsis thaliana GN=MSRB3 PE=2 ... [more]
MSRB5_ARATH6.8e-6076.34Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana GN=MSRB5 PE=1 ... [more]
BLAST of Cla012950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2R8_CUCSA6.3e-9784.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067530 PE=4 SV=1[more]
I1ME37_SOYBN2.6e-7465.91Uncharacterized protein OS=Glycine max GN=GLYMA_15G061100 PE=4 SV=1[more]
A0A067KVP5_JATCU9.8e-7465.60Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09906 PE=4 SV=1[more]
B9GJ03_POPTR3.7e-7365.90Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s29320g PE=4 SV=2[more]
M5W8E2_PRUPE1.1e-7264.98Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009769mg PE=4 SV=1[more]
BLAST of Cla012950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110198|ref|XP_008455101.1|9.4e-10286.64PREDICTED: peptide methionine sulfoxide reductase B5-like [Cucumis melo][more]
gi|449438264|ref|XP_004136909.1|9.1e-9784.33PREDICTED: peptide methionine sulfoxide reductase B5 [Cucumis sativus][more]
gi|356554848|ref|XP_003545754.1|3.7e-7465.91PREDICTED: peptide methionine sulfoxide reductase B5-like [Glycine max][more]
gi|645263090|ref|XP_008237068.1|6.3e-7465.44PREDICTED: peptide methionine sulfoxide reductase B5 [Prunus mume][more]
gi|470108044|ref|XP_004290345.1|8.3e-7465.00PREDICTED: peptide methionine sulfoxide reductase B5-like [Fragaria vesca subsp.... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB
IPR011057Mss4-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0030091protein repair
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016671oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0033743peptide-methionine (R)-S-oxide reductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
biological_process GO:0070887 cellular response to chemical stimulus
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0031668 cellular response to extracellular stimulus
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0006979 response to oxidative stress
biological_process GO:0033554 cellular response to stress
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0030091 protein repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009631 cold acclimation
biological_process GO:0019375 galactolipid biosynthetic process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005634 nucleus
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005575 cellular_component
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0070191 methionine-R-sulfoxide reductase activity
molecular_function GO:0046872 metal ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU12675watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU46380watermelon EST collection version 2.0transcribed_cluster
WMU50422watermelon EST collection version 2.0transcribed_cluster
WMU72775watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012950Cla012950.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU46380WMU46380transcribed_cluster
WMU12675WMU12675transcribed_cluster
WMU50422WMU50422transcribed_cluster
WMU72775WMU72775transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsBGENE3DG3DSA:2.170.150.20coord: 89..217
score: 1.4
IPR002579Peptide methionine sulphoxide reductase MrsBPFAMPF01641SelRcoord: 98..216
score: 8.1
IPR002579Peptide methionine sulphoxide reductase MrsBTIGRFAMsTIGR00357TIGR00357coord: 94..216
score: 5.0
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 92..216
score: 2.48
NoneNo IPR availablePANTHERPTHR10173:SF19PEPTIDE METHIONINE SULFOXIDE REDUCTASE B2, CHLOROPLASTIC-RELATEDcoord: 76..216
score: 1.8E