CmaCh19G004890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAACTTTGTTTGCATTGTTTTGTTTCTGAGAAAACGTCAGGACAGGGCGTGGAAAGTATGAACTATGCTATTCTTTCTACGGTCCCAACTTTGCTTCGTTTTTGTGTTTGTAATTGTTTCTTGTAGAGACTGGCCTTCACTGCGTTAATTTCTGATTTGATTCTTAACTTCTTTAAGTTTAGGAATTACTCTGTAGGTTGAAAGAAAGGGGAAATTTTCCTGTAAATTATTTTAGCTTAATCACCAATGTAGTTTGTCTTTCAATTCATGACCATGATATCATATATAATGTCAGCGCATACTTGTTTCATCTAGCGTTGTTACGAAAGGCTGATATATACTTCATTTACGCAAGCCTTCTCAATCCTCAGCATTCATAGATGTCATAAACCTAGTGAGTTACCAGCTCATTTTACGCACTCTTTTCTATTTCAGATTTGAGAAAGTTAAGTTCCTTTAGGTACGGGTACGAAAATGTGCTTTTGTTTACAGGCAAGGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAGGAATTTAAAGCTGCAGTATCTGCAGCAACGCAGGCATTTCCTGCTTGGCGTAATACTCCAGTTACAACTTGCCAACGAATTATGCTCAAGCTTCAAGAACTCGTTAGGCGAGATATCGTAAGTTCGTTTTTCAGTAAAAGGAATATTCCAAATCACTTCAAAAGTGGATCCCCCCCTCTCATTTCAGGACACACTTTCTCTAAATATTACAACAGAACAAGGAAAGACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGGTTATAA ATGAGGAACTTTGTTTGCATTGTTTTGTTTCTGAGAAAACGTCAGGACAGGGCGTGGAAAAGACTGGCCTTCACTGCGTTAATTTCTGATTTGATTCTTAACTTCTTTAAGTTTAGGAATTACTCTCGTTGTTACGAAAGGCTGATATATACTTCATTTACGCAAGCCTTCTCAATCCTCAGCATTCATAGATGTCATAAACCTAGCAAGGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAGGAATTTAAAGCTGCAGTATCTGCAGCAACGCAGGCATTTCCTGCTTGGCGTAATACTCCAGTTACAACTTGCCAACGAATTATGCTCAAGCTTCAAGAACTCGTTAGGCGAGATATCGTAAGTTCGTTTTTCAGTAAAAGGAATATTCCAAATCACTTCAAAAGTGGATCCCCCCCTCTCATTTCAGGACACACTTTCTCTAAATATTACAACAGAACAAGGAAAGACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGGTTATAA ATGAGGAACTTTGTTTGCATTGTTTTGTTTCTGAGAAAACGTCAGGACAGGGCGTGGAAAAGACTGGCCTTCACTGCGTTAATTTCTGATTTGATTCTTAACTTCTTTAAGTTTAGGAATTACTCTCGTTGTTACGAAAGGCTGATATATACTTCATTTACGCAAGCCTTCTCAATCCTCAGCATTCATAGATGTCATAAACCTAGCAAGGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAGGAATTTAAAGCTGCAGTATCTGCAGCAACGCAGGCATTTCCTGCTTGGCGTAATACTCCAGTTACAACTTGCCAACGAATTATGCTCAAGCTTCAAGAACTCGTTAGGCGAGATATCGTAAGTTCGTTTTTCAGTAAAAGGAATATTCCAAATCACTTCAAAAGTGGATCCCCCCCTCTCATTTCAGGACACACTTTCTCTAAATATTACAACAGAACAAGGAAAGACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGGTTATAA MRNFVCIVLFLRKRQDRAWKRLAFTALISDLILNFFKFRNYSRCYERLIYTSFTQAFSILSIHRCHKPSKEVVSQVPLTTNEEFKAAVSAATQAFPAWRNTPVTTCQRIMLKLQELVRRDIVSSFFSKRNIPNHFKSGSPPLISGHTFSKYYNRTRKDIKGCTWRCIPWARL
BLAST of CmaCh19G004890 vs. Swiss-Prot
Match: MMSA_ARATH (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 9.6e-17 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of CmaCh19G004890 vs. Swiss-Prot
Match: MMSA_DICDI (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 7.6e-06 Identity = 23/53 (43.40%), Postives = 40/53 (75.47%), Query Frame = 1
BLAST of CmaCh19G004890 vs. Swiss-Prot
Match: MMSA_RAT (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.9e-06 Identity = 23/57 (40.35%), Postives = 41/57 (71.93%), Query Frame = 1
BLAST of CmaCh19G004890 vs. TrEMBL
Match: A0A164VR78_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021901 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-18 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of CmaCh19G004890 vs. TrEMBL
Match: A0A0D2SLX1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G226800 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.7e-17 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of CmaCh19G004890 vs. TrEMBL
Match: A0A0D2NH48_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G226800 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.7e-17 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of CmaCh19G004890 vs. TrEMBL
Match: A0A0B0N9C8_GOSAR (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Gossypium arboreum GN=F383_11863 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.7e-17 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of CmaCh19G004890 vs. TrEMBL
Match: V4RQV5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028171mg PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 1
BLAST of CmaCh19G004890 vs. TAIR10
Match: AT2G14170.1 (AT2G14170.1 aldehyde dehydrogenase 6B2) HSP 1 Score: 88.2 bits (217), Expect = 5.4e-18 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of CmaCh19G004890 vs. NCBI nr
Match: gi|1021032950|gb|KZM90734.1| (hypothetical protein DCAR_021901 [Daucus carota subsp. sativus]) HSP 1 Score: 99.0 bits (245), Expect = 8.7e-18 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 1
BLAST of CmaCh19G004890 vs. NCBI nr
Match: gi|823160453|ref|XP_012480069.1| (PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating]) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of CmaCh19G004890 vs. NCBI nr
Match: gi|728829799|gb|KHG09242.1| (Methylmalonate semialdehyde dehydrogenase [acylating]) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of CmaCh19G004890 vs. NCBI nr
Match: gi|763764892|gb|KJB32146.1| (hypothetical protein B456_005G226800 [Gossypium raimondii]) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of CmaCh19G004890 vs. NCBI nr
Match: gi|567861978|ref|XP_006423643.1| (hypothetical protein CICLE_v10028171mg [Citrus clementina]) HSP 1 Score: 93.6 bits (231), Expect = 3.6e-16 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |