CmaCh18G013450 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G013450
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionHeavy metal transport/detoxification superfamily protein
LocationCma_Chr18 : 10220303 .. 10221073 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCGCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGTCTTATTTTGATTTTAAGTAGAACACCCATCTATATATTCTCCAAAATCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTATGACGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAAGGATGATGATGATAATAATAATAATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAACTTTTGTACATAATATATGTATCCATCTATCTTTTCACTCCATGGTCTTTGGATTCTCTAATCATCAATCTCAACATGAATGACTACTCCACACACTTCCACCAATCCTTTATTTCTACATCATCTTCTTCTTCTTCTTCTTCTACTTCTGCTTCACATCACCAGATGCACACAATTATGTTTCTTTGATTACCCCTGCTATTCTAAATTCAATTATCGTTGATGCTAATTTGGCTACTATCACC

mRNA sequence

ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCGCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAACGTAGATTATGACGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAAGGATGATGATGATAATAATAATAATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAACTTTTGTACATAATATATGTATCCATCTATCTTTTCACTCCATGGTCTTTGGATTCTCTAATCATCAATCTCAACATGAATGACTACTCCACACACTTCCACCAATCCTTTATTTCTACATCATCTTCTTCTTCTTCTTCTTCTACTTCTGCTTCACATCACCAGATGCACACAATTATGTTTCTTTGATTACCCCTGCTATTCTAAATTCAATTATCGTTGATGCTAATTTGGCTACTATCACC

Coding sequence (CDS)

ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCGCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAACGTAGATTATGACGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAAGGATGATGATGATAATAATAATAATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA

Protein sequence

MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Homology
[Close]
BLAST of CmaCh18G013450 vs. TrEMBL
Match: K4BHY7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.7e-34
Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVT+W
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTIW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDD--DDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLR 120
           GICNK  VL+ VRSKRKAARFWN++D  +++  +++++ P A    +  R     + + R
Sbjct: 61  GICNKYDVLARVRSKRKAARFWNEEDNMEESERDSSSSSPAASRYRIRPRAQPLALIRAR 120

Query: 121 SLSFKLACKKVFTTTRSYS 138
           SLS KLA KK F  TRSYS
Sbjct: 121 SLSLKLALKKAF--TRSYS 137

[Close]
BLAST of CmaCh18G013450 vs. TrEMBL
Match: M0ZIL1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000557 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-33
Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVTVW
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120
           GICNK  VL+TVRSKRKAARFWN +D    N    ++  +        RP   + + RSL
Sbjct: 61  GICNKYDVLATVRSKRKAARFWNTED----NMEEYSETDSSATCRYRIRPPLALIRARSL 120

Query: 121 SFKLACKKVFTTTRSYS 138
           S+KLA KK F  TRSYS
Sbjct: 121 SWKLALKKAF--TRSYS 131

[Close]
BLAST of CmaCh18G013450 vs. TrEMBL
Match: A0A061G9N4_THECC (Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao GN=TCM_015528 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-30
Identity = 82/137 (59.85%), Postives = 95/137 (69.34%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIV A    +VEPQ VEMMVPLYS+GC  K+ K LSHLKGIYSV VDY++QKVTVW
Sbjct: 1   MANMQIVVASK--NVEPQYVEMMVPLYSYGCERKVKKTLSHLKGIYSVTVDYNQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120
           GICNK  VLST+RSKRK ARFW  +D+        + P        S +PS  + K RSL
Sbjct: 61  GICNKFDVLSTMRSKRKEARFWKPEDNIEMEEAQPSSPPPSLRPKGSSKPSLALMKARSL 120

Query: 121 SFKLACKKVFTTTRSYS 138
           S+K A KKVF  TRSYS
Sbjct: 121 SWK-AWKKVF--TRSYS 132

[Close]
BLAST of CmaCh18G013450 vs. TrEMBL
Match: V7B618_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G189400g PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-29
Identity = 84/139 (60.43%), Postives = 100/139 (71.94%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA+    VE Q VEMMVPLYS+GC  KI KA S+LKGIYS+NVDY +QKVTVW
Sbjct: 1   MANMQIVPAYKNI-VEAQYVEMMVPLYSYGCEKKIKKAFSNLKGIYSLNVDYYQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSR--RPSFGVNKLR 120
           GICNKN VL TVRSKRK ARFWN+  +DN   + +  P +     + +  +PS  + K+R
Sbjct: 61  GICNKNDVLETVRSKRKEARFWNQ--EDNVVLDKSQSPLSSPSLFSQKDFKPSLALTKVR 120

Query: 121 SLSFKLACKKVFTTTRSYS 138
           SLS K A KKVF  TRSYS
Sbjct: 121 SLSLK-AWKKVF--TRSYS 133

[Close]
BLAST of CmaCh18G013450 vs. TrEMBL
Match: A0A0B2SPN3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039931 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.0e-29
Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA+    VE Q VEMMVPLYS+GC  KI K LS+LKGIYSVNVDY +QKVTVW
Sbjct: 1   MANMQIVPAYKTI-VEAQYVEMMVPLYSYGCEKKIKKTLSNLKGIYSVNVDYYQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDD---DNNNNNNNNDPQAEEEGLNSRRPSFGVNKL 120
           GICNK  VL TVRSKRK A+FWN++D+   + + + +++ P          +PSF + K+
Sbjct: 61  GICNKYDVLETVRSKRKEAQFWNQEDNVVLEKSQSPSSSPPPPFPH--KDFKPSFALTKV 120

Query: 121 RSLSFKLACKKVFTTTRSYS 138
           RSLS K A KKVF  TRSYS
Sbjct: 121 RSLSLK-AWKKVF--TRSYS 134

[Close]
BLAST of CmaCh18G013450 vs. TAIR10
Match: AT4G27590.2 (AT4G27590.2 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-27
Identity = 61/97 (62.89%), Postives = 74/97 (76.29%), Query Frame = 1 

Query: 1  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
          M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTVW
Sbjct: 1  MGDLQIVPVYNK--VEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTVW 60

Query: 61 GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNND 98
          GICNK  VL+ V+ KRK ARFWN ++++NNN  + +D
Sbjct: 61 GICNKLDVLAMVKKKRKEARFWNVEEEENNNPESVDD 95

[Close]
BLAST of CmaCh18G013450 vs. TAIR10
Match: AT3G56891.1 (AT3G56891.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 6.7e-09
Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 1 

Query: 19 LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRKA 78
          +VE++V +   GC  K+ +A+S L G+ +V +D D QKVTV G  ++ +VL  V+   + 
Sbjct: 17 IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRT 76

Query: 79 ARFW 83
          A +W
Sbjct: 77 AEYW 80

[Close]
BLAST of CmaCh18G013450 vs. TAIR10
Match: AT4G39700.1 (AT4G39700.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 6.2e-07
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 1 

Query: 18 QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTVRSKRK 77
          Q VE+ V +   GC  KI  +LS LKG+ +V ++  +QKVTV G  + ++VL   ++  K
Sbjct: 32 QTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGK 91

Query: 78 AARFW 83
           A  W
Sbjct: 92 KAEIW 96

[Close]
BLAST of CmaCh18G013450 vs. TAIR10
Match: AT3G24450.1 (AT3G24450.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 8.1e-07
Identity = 25/71 (35.21%), Postives = 43/71 (60.56%), Query Frame = 1 

Query: 13  FHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGICNKNQVLSTV 72
           FH++P++VE+ V ++ +GCA K+ K +S L G+    V+ + +KV V G      VL ++
Sbjct: 69  FHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESI 128

Query: 73  RSKRKAARFWN 84
             K K A+ W+
Sbjct: 129 -CKVKNAQLWS 138

[Close]
BLAST of CmaCh18G013450 vs. TAIR10
Match: AT3G48970.1 (AT3G48970.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 29/65 (44.62%), Postives = 37/65 (56.92%), Query Frame = 1 

Query: 20 VEMMVP-LYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVWGI-CNKNQVLSTVRSKRK 79
          VE+ VP L   GCA+K+ K L  LKG+  V V+ + QKVT  G    + +VL  VR   K
Sbjct: 5  VEIRVPNLDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGK 64

Query: 80 AARFW 83
          AA  W
Sbjct: 65 AAELW 69

[Close]
BLAST of CmaCh18G013450 vs. NCBI nr
Match: gi|460378549|ref|XP_004235033.1| (PREDICTED: uncharacterized protein LOC101252962 [Solanum lycopersicum])

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVT+W
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTIW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDD--DDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLR 120
           GICNK  VL+ VRSKRKAARFWN++D  +++  +++++ P A    +  R     + + R
Sbjct: 61  GICNKYDVLARVRSKRKAARFWNEEDNMEESERDSSSSSPAASRYRIRPRAQPLALIRAR 120

Query: 121 SLSFKLACKKVFTTTRSYS 138
           SLS KLA KK F  TRSYS
Sbjct: 121 SLSLKLALKKAF--TRSYS 137

[Close]
BLAST of CmaCh18G013450 vs. NCBI nr
Match: gi|565361569|ref|XP_006347528.1| (PREDICTED: uncharacterized protein LOC102593133 [Solanum tuberosum])

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-33
Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVTVW
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120
           GICNK  VL+TVRSKRKAARFWN +D    N    ++  +        RP   + + RSL
Sbjct: 61  GICNKYDVLATVRSKRKAARFWNTED----NMEEYSETDSSATCRYRIRPPLALIRARSL 120

Query: 121 SFKLACKKVFTTTRSYS 138
           S+KLA KK F  TRSYS
Sbjct: 121 SWKLALKKAF--TRSYS 131

[Close]
BLAST of CmaCh18G013450 vs. NCBI nr
Match: gi|970016696|ref|XP_015069457.1| (PREDICTED: uncharacterized protein LOC107014108 [Solanum pennellii])

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 81/137 (59.12%), Postives = 100/137 (72.99%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+++QKVT+W
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTIW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120
           GICNK  VL+ VRSKRKAARFWN ++D+   +  ++   A   G+  R     + + RSL
Sbjct: 61  GICNKYDVLARVRSKRKAARFWN-EEDNMEESERDSSSAASLYGIRPRAQPLALIRARSL 120

Query: 121 SFKLACKKVFTTTRSYS 138
           S KLA KK F  TRSYS
Sbjct: 121 SLKLALKKAF--TRSYS 134

[Close]
BLAST of CmaCh18G013450 vs. NCBI nr
Match: gi|950990420|ref|XP_014504316.1| (PREDICTED: uncharacterized protein LOC106764563 [Vigna radiata var. radiata])

HSP 1 Score: 139.8 bits (351), Expect = 3.8e-30
Identity = 82/137 (59.85%), Postives = 94/137 (68.61%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIVPA+    VE Q VEMMVPLYS+GC  KI K  S+LKGIYSVNVDY +QKVTVW
Sbjct: 1   MANMQIVPAYNNI-VEAQYVEMMVPLYSYGCEKKIKKTFSNLKGIYSVNVDYYQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120
           GICNK  VL TVRSKRK ARFWN++D         N    + E     +PS  + K+RSL
Sbjct: 61  GICNKYDVLETVRSKRKYARFWNEED---------NVVLEKSESSKDLKPSLALTKVRSL 120

Query: 121 SFKLACKKVFTTTRSYS 138
           S K A KK+F  TRSYS
Sbjct: 121 SLK-AWKKIF--TRSYS 124

[Close]
BLAST of CmaCh18G013450 vs. NCBI nr
Match: gi|590674653|ref|XP_007039228.1| (Heavy metal transport/detoxification superfamily protein [Theobroma cacao])

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 82/137 (59.85%), Postives = 95/137 (69.34%), Query Frame = 1 

Query: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60
           MAN+QIV A    +VEPQ VEMMVPLYS+GC  K+ K LSHLKGIYSV VDY++QKVTVW
Sbjct: 1   MANMQIVVASK--NVEPQYVEMMVPLYSYGCERKVKKTLSHLKGIYSVTVDYNQQKVTVW 60

Query: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLNSRRPSFGVNKLRSL 120
           GICNK  VLST+RSKRK ARFW  +D+        + P        S +PS  + K RSL
Sbjct: 61  GICNKFDVLSTMRSKRKEARFWKPEDNIEMEEAQPSSPPPSLRPKGSSKPSLALMKARSL 120

Query: 121 SFKLACKKVFTTTRSYS 138
           S+K A KKVF  TRSYS
Sbjct: 121 SWK-AWKKVF--TRSYS 132

The following BLAST results are available for this feature:
BLAST of CmaCh18G013450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh18G013450 vs. TrEMBL
Match NameE-valueIdentityDescription
K4BHY7_SOLLC8.7e-3458.27Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M0ZIL1_SOLTU4.3e-3360.58Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000557 PE=4 SV=1[more]
A0A061G9N4_THECC7.7e-3059.85Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao GN=T... [more]
V7B618_PHAVU1.0e-2960.43Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G189400g PE=4 SV=1[more]
A0A0B2SPN3_GLYSO5.0e-2959.29Uncharacterized protein OS=Glycine soja GN=glysoja_039931 PE=4 SV=1[more]
BLAST of CmaCh18G013450 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27590.23.2e-2762.89 Heavy metal transport/detoxification superfamily protein [more]
AT3G56891.16.7e-0937.50 Heavy metal transport/detoxification superfamily protein [more]
AT4G39700.16.2e-0738.46 Heavy metal transport/detoxification superfamily protein [more]
AT3G24450.18.1e-0735.21 Heavy metal transport/detoxification superfamily protein [more]
AT3G48970.11.8e-0644.62 Heavy metal transport/detoxification superfamily protein [more]
BLAST of CmaCh18G013450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|460378549|ref|XP_004235033.1|1.3e-3358.27PREDICTED: uncharacterized protein LOC101252962 [Solanum lycopersicum][more]
gi|565361569|ref|XP_006347528.1|6.2e-3360.58PREDICTED: uncharacterized protein LOC102593133 [Solanum tuberosum][more]
gi|970016696|ref|XP_015069457.1|1.1e-3259.12PREDICTED: uncharacterized protein LOC107014108 [Solanum pennellii][more]
gi|950990420|ref|XP_014504316.1|3.8e-3059.85PREDICTED: uncharacterized protein LOC106764563 [Vigna radiata var. radiata][more]
gi|590674653|ref|XP_007039228.1|1.1e-2959.85Heavy metal transport/detoxification superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G013450.1CmaCh18G013450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 24..61
score: 7.3
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 18..83
score: 3.53
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 17..81
score: 4.7
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 3..110
score: 1.2
NoneNo IPR availablePANTHERPTHR22814:SF49HEAVY METAL ASSOCIATED DOMAIN-CONTAINING PROTEINcoord: 3..110
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G013450CmoCh18G013790Cucurbita moschata (Rifu)cmacmoB406
CmaCh18G013450Lsi07G003240Bottle gourd (USVL1VR-Ls)cmalsiB393
CmaCh18G013450Cp4.1LG09g00020Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G013450Carg20312Silver-seed gourdcarcmaB0754
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G013450Cucurbita maxima (Rimu)cmacmaB338
CmaCh18G013450Cucurbita moschata (Rifu)cmacmoB405
CmaCh18G013450Wild cucumber (PI 183967)cmacpiB418
CmaCh18G013450Cucurbita pepo (Zucchini)cmacpeB425
CmaCh18G013450Silver-seed gourdcarcmaB1368
CmaCh18G013450Cucumber (Chinese Long) v3cmacucB0493