CmaCh18G008300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G008300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nuclear transcription factor Y subunit C8
Location	Cma_Chr18 : 7248093 .. 7253690 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAAAACCCTAATTTCTCCTGGATCTGAGATTGCTTCGATGAATTTCTGTGTTGATTGTCCATTGATCGAAATGGTAATCGGATTCTGCTGAAGTTCTGCCAATTTTCTGCTGTTGTTTCTTCGTTTTTTCATATATTTTTTCATCCATTTGAATGTCTCGAATCTGACGCCATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGTAAGTTCGATATTTTCTGTTCCTGTTTTTTTTTTTTTTTCTTTCGATCAAATTGATAATCTAACGAATTGATTGGAAAATTTGTTTGTTTGCTAATTTCTGCCATTGAAGAGAACATGGCGTACAGTTTCGTCCGATGATTTGTGCATCTAACTTTTTTCTTAATTTTTCCTATCATTATTATCATCTGGTCGGTTTCGTGCGATGTTTTGATGTATTCCTTATATGGCGGGAATTTTCTGTATAAAATGCGTTTGATTACTTTGTCTGTGTTAATTAAGCTAACTCTGTAGTTTTGTTCGTCTGCAACTTGTCCTGCTCAGTTCATAGTATCAAATATTAATTACGGATCCATTACTGTATAGGCCTGGGAAATGAATTTAATCGTCGTTGATATCATATATATGGTTGATTTTGACGCATTAGAGCTTTTAAGCTTAAATTTAGGGCCTTTTTTTCTTCCTCTTCCTGCTGGGGGGAAAATACATAGTGATTAAGCTTGCAAAGATACAGTGTTTTTTTTTTTTTTGATAAAAAAAATATTTTTCTTTGTTCCTGCCAACATAATGGGGCTGTTAAGAAAGAGAAACCTGATTGAAAAAGGCACATCAATTCTTAACTCTGATAGCGAGAGCAGCATTAGAAATAAATTGCATTAAGAAGCTAAAAGGGAGGCAGGGAAGTGAACAATGGACCTAGAATCCTCTCAATATGTCTAACCTGAAGAAACCCTTTTGTTCCTCTCTAACCTGACTTGCCATATCGTACCCCTAAGAGGAATTATATGGTAATCTAAATCACGTGCGAACTTAAGCTTTTTGCTATATCATACTCTAATCTAGTTAGAAACTCTTAGTTTACCTTACAAGGACCCCTATAGCCACAACAATTGATATTTCGTACAAAAGGGAGAATGAAAGTGAATTTCATCGAACATAGCATGACATAGCTACTCCAAAAGCTTAGAGAAGCCTAACTGAAATCAAACTGGCCAAAGCACACAGGCGGAGGATGTGATTGTGTCCTCGTGATACTAAAGGACAAAGATTAACCCTAACTCTATCACCTCCTTTCTAGGTTTTTTTGTTAATAACATTCAACGTTCTTCATGGTAGTGAGTAAATCGTAACATTCTTATATTATATTGGTTTTTGTCGACATTCTTTTTTTTTACTCATAAAATCCTCTTCATTCTACTGTAGCTTTGAAATCTTATATAAAATTTTAGTTGAAAAACAAGTAAACAACTACTCTACGGAAGATTTTTTTTCCTATATGAAGAAAAGAACCAATTTTCTACTGCAAACCTTTAAACATTGGTTCCAAATAGATGTTCATTCCTTAAATTCTGATTTTTTTAGGACAAAGTTAGAAATTGGGAAGGTCATTAAGTTGTCAGTGGTGCTCCTGCGCTCTATCCATTTCTTCTGTAATTAAAATACTTGATCCGTAACAATTGGAGTAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCTTTGATAGGGTCTGAGGAGTTGATTCCCTGCCTCCTTCTTTTTGTGCTATTCTGACCCATATAAATTAGACCATATAAATTAGAGTTGGTTCATGTAATGGCCCAAGCTCACCGCTAGCAAATATTGTCCTCTTTGGGCTTCCCCTCGAGGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAAGGTGTTTCGTTCTCCTCTCCAACCGATGTGGGATATCACAATCCACCCCCCTTCAGAGCCCAACGTACTCGTTCACTTGTTCTTTTTTCCAATCGATGTGGGACCCCCCACCCAATCCAACCCCTTCGGGGCCCAACGTCCTTGCTGGCACACCGCCTTGTGTCTACCCCCCTTCGGGGAACAACCTCCTCGCTAGCGCATCGCCCGATGTCTGGCTCTGATACCATTTGTAACAGCCCAAGCCCACTGTTAGCAGATATTGTTCTCTTTGGGCTTTCCCTTTCAGGCTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGAGAAAGGTATCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATATGGGATATCACAGTTTATGATTATTTACTTTTTACTTTGGACTCTTAGGTCTCTAGAAGATGTCTGTCAGTGCAGGCTGTTTGGTGAAAATTCTTAAAACTTATGTTCTGACATGATCTTGCGTACTGAAGCCTCGAGTATCTAAGATGGCCTTTTACTTTCACTCATGTCAGCCACCCTTTTCAAATATAGAAACTCTAGAATATAAAGTCTATAGATAATTTGATAGTTTATAAATGATTTGGTTGGCAAATTTTTATTCCTTTTGTTTACAAAGATAGTAAGATTTTTCGAACTTCTAGAATTTGGATGTGGGGTTCATGGTTTGCTTACTTGAAAATGTTGCATCAGTATCTTGACATACATGTCTTGGGCTTGTGATTTTTTGGGCTGCCTTGTTGTTTACTTTTCTTTTGCTCAATGAAAGCTTAGTTCTTGGGAAAAAGAAAGAAAGAGAGAAAGAAAGAGAAAAGGAAAAGTTTCAGCGTAGAATCTGCACGGGACATTATATTCAGTTCCAAAGGGTGTTCTTGGACAATCTCTATTTTATTACGAATCATGGTCCTGTCATTAAATGGTATTCAAATGATTTCTTGGAAACGTCTGAAGCATTGTAGCACGATACACTATGAATTGATGTTAAAATAATTGAATGAATTAATAGCTGGTTCCCTGACTGATGTGCTGACATCAATCATAGATAGCTGGATGTTATATGCTTGACAGTTGCAATTATTCTATCCTTGCTGTTGCTCGATATAGATTTTCATGCTTGTCCTTGAGTTTTTAAGATGATTGGTGACACCAGAATCAATTGTCTTGCTATTGCTTCTCCGGGTGGTGGTTGTTGGGGACCATGGGAGTCCCCTTCTAAACATAATTTGGCATGTTATGGCCTGGCGTTTACTTGATGATTTGACTTACTGTACAATTTTTATTGGTGGAATTTTAACATATAGGAAATTATCAGTTCAACTGCGTGGAAGGATAATTGTTTCAGTGAACTTTAAAATTTTGATCGAATCCTAAATCTTGATTGGATTTTCAGTTCATTGTTATCTGACGAATGATATAATTTTGCAGGCTCGAATAAAAAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCAGTACCTGTTTTAGTTTGTAAGCAAACATTAATGATGGTTCAGTAGTATTCAATATCATAAGGTGTTCCATTTAAGACATTTATGATAGCTAATGTTTCTTCACATTTAATTCAGCTAAAGCATTGGAGCTATTCTTGCAAGACCTCTGTGATCGTACTTATGAGATAACTCTACAAAGAGGAGCAAAGACAATGAACTCATTCCACCTGTAAGACCATATTTCAATCGATTTGTTTTACGAAGTTTCGTGAATCCCATACATTCAAACTCGGAAAATTTACAGTTTTTACCTTTTGCTTCTAACTGGTTAATTCCTTTTGTGACCCTACAACTTTACTGGTAATTATTACTATCACATACATACCCTCTTCCCCATTCCTCATTTGTCTCCCCAAATCTGATTGCTTTGTTTTTCGACGTCGGTTTGTCTTACTGTCATTTTTGAACTTTGATTACAGAAAGCACTGTGTACAAAGCTATAGCGTCTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGTATGATACAGTTATTTCATACTCAGATATTTGTTATGATCAGTAGATAACTTAACGTGCTTGATATCTGATCAGGAAGCCCCTTGGTGATGAGGGCAATGATATTGATGAGTTGAAGAAGATCAGGATGGTAATTATTCTTTCATCCTAACTAATCAAATATCTGTTAAATTTGCATTTTTTTTAACCGAGAAAATCTCCGAGAATTATTTTATTGGTTAACTTATAAATTTGGTCGGAGAAAGGTTAGAATTTAGTTTCTATTGTTTTAAAAGTTTAAATTTTATCCTTTATGGCTTGATAAAACCTTAAATAATCTTTATGGTTCGATAAAATACTTCCTCCGTAGGGAAATTTTTTTGTATTTTCATTCAGCCATGGGACTAATTCTAACATTTTTTAAGTTATAGGGACTAAACTTATAATTTGAACTAAGAGACCGAGCTTTCATGAAATGCATAATGAAGTCATTGAACCCAATAAATCATTTGCTTTCCTCCTCCAGCATGACATGAGCCATGGCAGCACTGGTAGAGGAAGAGGAAGAGGACGAGGAAGGGGTCGAGGACGACCAGCTCGAACAGCCGAAAGAGACAACATCCCACCTAATCCCGAAGCCGACACTTGCACATCTATAGAAAACAGGAACAAGAGCCCCAATCCAGATGTGCAGATGGAGAATCACGTCGAGCCAAGCAAAACATCAAAAGAAGTCAGTGAAGAAGCCAATCAAGCTATTCAAAACTTCGATCTTAATGCCGATGTCGTCAACACCAGTGAAGACTCCAACAAGACTATTGCAGCAGCAGCAGCAGCAGCAGCCGCCATAATACCAGAAGTGCCTGTTGAACCAACCGGGCCTACTACCACCGAATCCGAGGCTAAAGCGGCTGCTGCTGCTGCTGTTGCTGCTGATGAATTCCCCGCCTGGCCTCTCTCGGACGTTGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGATGAGGAAGAGGAAGATTATGATGAAGAGGAGTAACATCCCTTGAATGTGCTGAGAGAATGAATCAATGAATCTATACTTGGAAGCAAGCAAGCAAGCTAGAACACTACAGAGGAGGAAGGTCAGTTTTAAGAAGGCAAAGAAAGAAATTAAAGAAGAATCAGAGATTGGAGTTTGAATATGTTAACATGCCCTCTATGTAGTTAGTAGTTCAACCTGAAATCCTTTCTCTGATTTTTTTTTTTTTTTTTTTTTTCTTCTTAATGTTCTAAGTGTATTGGTTTCTCAATCTAACATTAGGTCTGTAGCTGTTGAAATGTAATAGCTTGTTCATTATGTAATCCATAACGTTAGCAGTAGGTTCTACTTTTTTTTTCTTTTTCCTTTGCTCTTTTTCTTGGAAGCTGATAGGTGCATGTCGTGTGAAACCTTAATTAAATTACTCGAGATTATTAGTTGTCGTTGCCCAAGTAAACAGGTTCGTGGTTTTATTGCACCAGACAATTCACTCACTGGACCTCCTTTCTTATGTATCCGAAGATGTCATGTGAATTAAATTACTCGTCATTGCCCAAGTAAACAAGTTCTTTCTAATGTATCCGAAG

mRNA sequence

GATAAAAACCCTAATTTCTCCTGGATCTGAGATTGCTTCGATGAATTTCTGTGTTGATTGTCCATTGATCGAAATGGTAATCGGATTCTGCTGAAGTTCTGCCAATTTTCTGCTGTTGTTTCTTCGTTTTTTCATATATTTTTTCATCCATTTGAATGTCTCGAATCTGACGCCATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCTCGAATAAAAAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCAGTACCTGTTTTAGTTTCTAAAGCATTGGAGCTATTCTTGCAAGACCTCTGTGATCGTACTTATGAGATAACTCTACAAAGAGGAGCAAAGACAATGAACTCATTCCACCTAAAGCACTGTGTACAAAGCTATAGCGTCTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAGCCCCTTGGTGATGAGGGCAATGATATTGATGAGTTGAAGAAGATCAGGATGCATGACATGAGCCATGGCAGCACTGGTAGAGGAAGAGGAAGAGGACGAGGAAGGGGTCGAGGACGACCAGCTCGAACAGCCGAAAGAGACAACATCCCACCTAATCCCGAAGCCGACACTTGCACATCTATAGAAAACAGGAACAAGAGCCCCAATCCAGATGTGCAGATGGAGAATCACGTCGAGCCAAGCAAAACATCAAAAGAAGTCAGTGAAGAAGCCAATCAAGCTATTCAAAACTTCGATCTTAATGCCGATGTCGTCAACACCAGTGAAGACTCCAACAAGACTATTGCAGCAGCAGCAGCAGCAGCAGCCGCCATAATACCAGAAGTGCCTGTTGAACCAACCGGGCCTACTACCACCGAATCCGAGGCTAAAGCGGCTGCTGCTGCTGCTGTTGCTGCTGATGAATTCCCCGCCTGGCCTCTCTCGGACGTTGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGATGAGGAAGAGGAAGATTATGATGAAGAGGAGTAACATCCCTTGAATGTGCTGAGAGAATGAATCAATGAATCTATACTTGGAAGCAAGCAAGCAAGCTAGAACACTACAGAGGAGGAAGGTCAGTTTTAAGAAGGCAAAGAAAGAAATTAAAGAAGAATCAGAGATTGGAGTTTGAATATGTTAACATGCCCTCTATGTAGTTAGTAGTTCAACCTGAAATCCTTTCTCTGATTTTTTTTTTTTTTTTTTTTTTCTTCTTAATGTTCTAAGTGTATTGGTTTCTCAATCTAACATTAGGTCTGTAGCTGTTGAAATGTAATAGCTTGTTCATTATGTAATCCATAACGTTAGCAGTAGGTTCTACTTTTTTTTTCTTTTTCCTTTGCTCTTTTTCTTGGAAGCTGATAGGTGCATGTCGTGTGAAACCTTAATTAAATTACTCGAGATTATTAGTTGTCGTTGCCCAAGTAAACAGGTTCGTGGTTTTATTGCACCAGACAATTCACTCACTGGACCTCCTTTCTTATGTATCCGAAGATGTCATGTGAATTAAATTACTCGTCATTGCCCAAGTAAACAAGTTCTTTCTAATGTATCCGAAG

Coding sequence (CDS)

ATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCTCGAATAAAAAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCAGTACCTGTTTTAGTTTCTAAAGCATTGGAGCTATTCTTGCAAGACCTCTGTGATCGTACTTATGAGATAACTCTACAAAGAGGAGCAAAGACAATGAACTCATTCCACCTAAAGCACTGTGTACAAAGCTATAGCGTCTTCGATTTTCTGAGGGATATTGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAGCCCCTTGGTGATGAGGGCAATGATATTGATGAGTTGAAGAAGATCAGGATGCATGACATGAGCCATGGCAGCACTGGTAGAGGAAGAGGAAGAGGACGAGGAAGGGGTCGAGGACGACCAGCTCGAACAGCCGAAAGAGACAACATCCCACCTAATCCCGAAGCCGACACTTGCACATCTATAGAAAACAGGAACAAGAGCCCCAATCCAGATGTGCAGATGGAGAATCACGTCGAGCCAAGCAAAACATCAAAAGAAGTCAGTGAAGAAGCCAATCAAGCTATTCAAAACTTCGATCTTAATGCCGATGTCGTCAACACCAGTGAAGACTCCAACAAGACTATTGCAGCAGCAGCAGCAGCAGCAGCCGCCATAATACCAGAAGTGCCTGTTGAACCAACCGGGCCTACTACCACCGAATCCGAGGCTAAAGCGGCTGCTGCTGCTGCTGTTGCTGCTGATGAATTCCCCGCCTGGCCTCTCTCGGACGTTGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTCAGCACAAGAGTAGATGAGGAAGAGGAAGATTATGATGAAGAGGAGTAA

Protein sequence

MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDIDELKKIRMHDMSHGSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNKSPNPDVQMENHVEPSKTSKEVSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAIIPEVPVEPTGPTTTESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE

Homology

[Close]

BLAST of CmaCh18G008300 vs. Swiss-Prot
Match: NC2A_RAT (Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 1


Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSFHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKP 108
           M + HLK C++    FDFL+D+V+ VPD  G G   H+DG    R+ RKP
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHTDGDKGPRRGRKP 114

[Close]

BLAST of CmaCh18G008300 vs. Swiss-Prot
Match: NC2A_BOVIN (Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 1


Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSFHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRK 107
           M + HLK C++    FDFL+D+V+ VPD  G G   H DG    R+ RK
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGPRRGRK 113

[Close]

BLAST of CmaCh18G008300 vs. Swiss-Prot
Match: NC2A_MOUSE (Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=1 SV=3)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-22
Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = 1


Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSFHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLGDEGNDIDE 121
           M + HLK C++    FDFL+D+V+ VPD  G G   H DG    R+ RKP          
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRKP---------- 124

Query: 122 LKKIRMHDMSHGSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADT 164
                      GS+GR  G    +G+ +     + +    + + DT
Sbjct: 125 -----------GSSGRKNGGTGSKGKDKKLSGTDSEQEDESEDTDT 149

[Close]

BLAST of CmaCh18G008300 vs. Swiss-Prot
Match: NC2A_HUMAN (Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 106.3 bits (264), Expect = 5.9e-22
Identity = 72/179 (40.22%), Postives = 97/179 (54.19%), Query Frame = 1


Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSFHLKHCVQSYSVFDFLRDIVSRVPD-YGHG---HSDGAVDDRKRRKPLGDEGNDIDE 121
           M + HLK C++    FDFL+D+V+ VPD  G G   H DG    R+ RKP          
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKP---------- 124

Query: 122 LKKIRMHDMSHGSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNKSPNP 177
                      GS GR  G G G  + +  + +  D+   +   DT T  E     P P
Sbjct: 125 -----------GSGGRKNG-GMGT-KSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPP 160

[Close]

BLAST of CmaCh18G008300 vs. Swiss-Prot
Match: DPB3_SCHPO (DNA polymerase epsilon subunit C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpb3 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.1e-19
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 1


Query: 7   TRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSFH 66
           +RFP ARIKKIMQAD+DVGK+A   PV++SKALELF+Q +   + + T    AK +   H
Sbjct: 22  SRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSH 81

Query: 67  LKHCVQSYSVFDFLRDIVSRVPD 90
           LKH VQS   FDFL+DIV +VPD
Sbjct: 82  LKHAVQSVEQFDFLQDIVEKVPD 104

[Close]

BLAST of CmaCh18G008300 vs. TrEMBL
Match: A0A0A0KPQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583350 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.0e-126
Identity = 251/299 (83.95%), Postives = 263/299 (87.96%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDIDELKK 120
           TMNS HLKHCVQSYSVFDFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGND DELKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKK 120

Query: 121 IRMHDMSHGSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNKSPNPDVQM 180
            +MHDMSH STGRGRGRGRGRGRGRPAR+AERDN  PNP+ D CTSIENRNK+PNPDV M
Sbjct: 121 SKMHDMSHVSTGRGRGRGRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKNPNPDVHM 180

Query: 181 ENHVEPSKTSKEVSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAIIPEVPVEPT 240
           E+HVEPS T KEVSE ANQAIQNFDLNADV +T+EDS KT+ AAA      + + P+EP 
Sbjct: 181 EHHVEPSDTPKEVSE-ANQAIQNFDLNADV-STNEDS-KTVPAAA------VSDAPIEPA 240

Query: 241 GPTTT-ESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
            PTTT ESE KAA       DEFPAWPLSDVDKMAIDPLQY HLS+RVDEEEEDYDEEE
Sbjct: 241 APTTTTESETKAA-------DEFPAWPLSDVDKMAIDPLQYTHLSSRVDEEEEDYDEEE 283

[Close]

BLAST of CmaCh18G008300 vs. TrEMBL
Match: M5XLH5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008839mg PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.9e-86
Identity = 196/319 (61.44%), Postives = 235/319 (73.67%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR---KRRKPLGDEGNDID- 120
           TMN+ HLKHCVQSY+VFDFLRDIVSRVPDYGHGHSD A +DR   KRRKP GDE  D D 
Sbjct: 61  TMNAVHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSDAAGEDRAISKRRKPPGDECIDSDE 120

Query: 121 ELKKIRMHDMSHG-STGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNK-SP 180
           ELK+ +M +++HG S+GRGRGRGRGRGRGR  R +ER+ +    E++ CTS+++  K +P
Sbjct: 121 ELKRSKMLEVNHGSSSGRGRGRGRGRGRGR-GRASERETLHHETESEPCTSLQHATKPNP 180

Query: 181 NPDVQMENHVEPSKTSKE---VSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAI 240
           NP + +++  E  +  KE   + +E++ A++NFDLNADV+    +  K  A AA AA A 
Sbjct: 181 NPGMVVDDASESKEEMKENAVIPDESDPAVRNFDLNADVI--ENEDTKAAATAAQAATAA 240

Query: 241 IPEVPVEPTGPTTTESEAKAAAAAAVAA-------------DEFPAWPLSDVDKMAIDPL 298
                      T +++ A A+ AAA AA             +E+P W LSDVDKMAIDPL
Sbjct: 241 QASSTATQAAATASQAAATASQAAATAAPTSSAGPTSEIKHEEYPGWSLSDVDKMAIDPL 300

[Close]

BLAST of CmaCh18G008300 vs. TrEMBL
Match: B9GXA0_POPTR (Transcription factor family protein OS=Populus trichocarpa GN=POPTR_0003s19130g PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.4e-85
Identity = 195/305 (63.93%), Postives = 229/305 (75.08%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRT+EITLQRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTHEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR--KRRKPLGDEGNDID-E 120
           TM++ HLKHCVQSY+VFDFLR+IVSRVPDY HGHSD   D R  ++RKP GDE ND D E
Sbjct: 61  TMSALHLKHCVQSYNVFDFLREIVSRVPDYSHGHSDSTGDHRPLQKRKPTGDECNDSDEE 120

Query: 121 LKKIRMHDMSH-GSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNK-SPN 180
           LK+ RMH+MSH GS+GRGRGRGRGRGRGR AR  ER++   + E ++CT+++   K + N
Sbjct: 121 LKRSRMHEMSHAGSSGRGRGRGRGRGRGRGARNIERESSSRDLEPESCTTVQQSIKNNTN 180

Query: 181 PDVQMENHVEPSKTSKE---VSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAII 240
           P V M+N  E  ++ KE   VS+  NQ  +NFDLNA+ VN SED+    AAAA AAAA  
Sbjct: 181 PGVVMDNGSESKESVKENNRVSDATNQPERNFDLNAE-VNDSEDAK---AAAAPAAAAPA 240

Query: 241 PEVPVEPTGPTTTESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEE 298
                  T  TT+   +    AA    +E+P W LS++DKM IDPLQ A LS R+DEEEE
Sbjct: 241 AAATTTTTTTTTSAPSSSVEPAAETNHEEYPGWSLSEMDKMVIDPLQLAQLSKRLDEEEE 300

[Close]

BLAST of CmaCh18G008300 vs. TrEMBL
Match: A0A067L7U3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24574 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.2e-84
Identity = 193/315 (61.27%), Postives = 230/315 (73.02%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR--KRRKPLGDEGNDID-E 120
           TM++ HLKHCVQSY+VFDFLRDIVSRVPDYGHGHSD + D R  ++RKP+GDE ND D E
Sbjct: 61  TMSALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSDHSADHRPLQKRKPIGDECNDSDEE 120

Query: 121 LKKIRMHDMSH-GSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNK-SPN 180
            K+ RMH+ SH GS+GRGRGRGRGRGRGR +R  ER++     E++  T+++   K + N
Sbjct: 121 SKRSRMHETSHAGSSGRGRGRGRGRGRGRGSRNVERESSHREIESEPSTALQQSIKVNSN 180

Query: 181 PDVQMENHVEPSKTSKE---VSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAII 240
           P + ++N  E  +   E    S+ AN + +NFDLNADV+   +      A+AAAAAAA  
Sbjct: 181 PGIAVDNGSESKELLMEDAVASDGANASERNFDLNADVIENEDSKATAAASAAAAAAAAS 240

Query: 241 PEVPVEPTGPTTTESEAKAAAA-----AAVAA-----DEFPAWPLSDVDKMAIDPLQYAH 298
                  T P+T+ + A A AA     AAV A     +E+P W LS++DKM  DPLQ A 
Sbjct: 241 ASASASATSPSTSTATATAGAAVIDSSAAVPATDTNREEYPGWSLSEMDKMPFDPLQLAQ 300

[Close]

BLAST of CmaCh18G008300 vs. TrEMBL
Match: A0A061FR83_THECC (Nuclear factor Y isoform 1 OS=Theobroma cacao GN=TCM_044728 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.9e-84
Identity = 192/311 (61.74%), Postives = 222/311 (71.38%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR---KRRKPLGDEGNDIDE 120
           TM+S HLKHCVQSY+VFDFLRDIVSRVPDYGHGHSD   DDR   KRRK  GDEGND DE
Sbjct: 61  TMSSLHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSDAGADDRTISKRRKAAGDEGNDSDE 120

Query: 121 -LKKIRMHDMSH-GSTGRGRGRGRGRGRGRPARTAERDN---IPPNPEADTCTSIENRNK 180
             K+ RMHD+ H G++GRGRGRGRGRGRGR AR  ERD+   + P P    C  +++ NK
Sbjct: 121 ESKRSRMHDVGHAGTSGRGRGRGRGRGRGRGARNVERDSHRELEPEP----CQPLQHSNK 180

Query: 181 S-PNPDVQMENHVEPSKTSKE--VSEEANQAIQNFDLNADV---VNTSEDSNKTIAAAAA 240
           S   P + +++  E  +  KE  + E+ANQA++NFDLNA+V   V+T   +  + AAA  
Sbjct: 181 SLSTPGMVIDDGSESKELMKENTIGEDANQAVRNFDLNAEVDENVDTKASAGASAAAATT 240

Query: 241 AAAAIIPEVPVEPTGPTTTESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTR 298
           A A            PTT               +E+P W LS++DKMAIDPLQ A L  R
Sbjct: 241 ATATAAAAAQPSSAEPTTETKH-----------EEYPGWSLSEMDKMAIDPLQLAQLGRR 296

[Close]

BLAST of CmaCh18G008300 vs. TAIR10
Match: AT3G12480.1 (AT3G12480.1 nuclear factor Y, subunit C11)

HSP 1 Score: 247.7 bits (631), Expect = 9.2e-66
Identity = 166/325 (51.08%), Postives = 204/325 (62.77%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSK+LELFLQDLCDRTYEITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGH----GHSDGAVDDR---KRRKPLGDEGN 120
           T++S HLKHCV+ Y+VFDFLR++VS+VPDYGH    GH D  +DDR   KRRKP+ DE N
Sbjct: 61  TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN 120

Query: 121 DIDE-LKKIRMHDMSHGST----GRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIE 180
           D DE  KK +  ++    T    GRGRGRGRGRG GR A+ AER+ +    E +   S +
Sbjct: 121 DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRG-GRAAKAAEREGLNREMEVEAANSGQ 180

Query: 181 NRNKSPNPDVQMENHVEPSKTSKEV----------SEEANQAIQN------FDLNADVVN 240
                P P+  ++ H   S   ++           +E+  Q +Q+      FDLNA+   
Sbjct: 181 -----PPPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDLNAE--- 240

Query: 241 TSEDSNKTIAAAAAAAAAIIPEVPVEPTGPTTTESEAKAAAAAAVAADEFPAWPLSDVDK 298
            S D N+T  A A              TG TTT +       AA  ++E+  WP+ D+ K
Sbjct: 241 -SLDLNETKLAPA--------------TGTTTTTT-------AATDSEEYSGWPMMDISK 292

[Close]

BLAST of CmaCh18G008300 vs. TAIR10
Match: AT5G19490.1 (AT5G19490.1 Histone superfamily protein)

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-43
Identity = 113/245 (46.12%), Postives = 151/245 (61.63%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           M+KKL TRFPA RIKKIMQ DE+VGKIA+AVP+LVSKALELFLQDLC+ TY++TL RGAK
Sbjct: 1   MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDIDELKK 120
           T+N+FHLK CVQ+ +VFDFLRD V++VPD G   ++     ++R+   G   ND D +K 
Sbjct: 61  TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSDTEDQSATKRRKVVDGSSCNDEDMIKT 120

Query: 121 IRMHDMSHGSTGRG-RGRGRGRGRGRP----ARTAERDNIPPNPEADTCTSIENRNKSPN 180
            +MH++ H S GRG RGRGRGR  GR     +   E D    +PE+    S EN + S +
Sbjct: 121 TQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLKFEEDLEDGSPESSRTPSPENGSLSHD 180

Query: 181 PD--VQMENHVEPSKTSKEVSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAIIP 239
                ++ +H     ++ EV       ++NFDLN ++     D N   A          P
Sbjct: 181 DTSWKKVASHNNHHSSNSEVK------VRNFDLNVEL-----DENGDNATWLETQLERSP 234

[Close]

BLAST of CmaCh18G008300 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2)

HSP 1 Score: 61.6 bits (148), Expect = 9.4e-10
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 1


Query: 10  PAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSFHLKH 69
           P ARIKKIM+ADEDV  I+   PV+ +KA E+F+ +L  R +  T +   +T+    +  
Sbjct: 78  PLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAA 137

Query: 70  CVQSYSVFDFLRDIVSR--VPDYGHGHSDGAV 100
            +    VFDFL DI+ R  + + G G + G +
Sbjct: 138 AISRTDVFDFLVDIIPRDELKEEGLGVTKGTI 169

[Close]

BLAST of CmaCh18G008300 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 1


Query: 8   RFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSFHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 65  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124

Query: 68  KHCVQSYSVFDFLRDIVSR 87
              +    +FDFL DIV R
Sbjct: 125 AAAITRTDIFDFLVDIVPR 143

[Close]

BLAST of CmaCh18G008300 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 10  PAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSFHLKH 69
           P ARIKKIM+ADEDV  I+   PV+ ++A E+F+ +L  R++  T +   +T+    +  
Sbjct: 82  PLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 141

Query: 70  CVQSYSVFDFLRDIVSR 87
            V    +FDFL DIV R
Sbjct: 142 AVTRTDIFDFLVDIVPR 158

[Close]

BLAST of CmaCh18G008300 vs. NCBI nr
Match: gi|659090303|ref|XP_008445943.1| (PREDICTED: dr1-associated corepressor [Cucumis melo])

HSP 1 Score: 460.7 bits (1184), Expect = 2.0e-126
Identity = 249/298 (83.56%), Postives = 261/298 (87.58%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDIDELKK 120
           TMNS HLKHCVQSYSVFDFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGND DELKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKK 120

Query: 121 IRMHDMSHGSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNKSPNPDVQM 180
            +MHDMSHGSTGRGRGRGRGRGRGRPAR+AERDN  PNP+ D CTSIENRNK+PNPDV M
Sbjct: 121 SKMHDMSHGSTGRGRGRGRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKNPNPDVHM 180

Query: 181 ENHVEPSKTSKEVSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAIIPEVPVEPT 240
           E+HVEP  T KEVSE ANQAIQNFDLNADV +T+EDS KT+ AAA      + + P+EP 
Sbjct: 181 EHHVEPGDTPKEVSE-ANQAIQNFDLNADV-STNEDS-KTVPAAA------VSDAPIEPA 240

Query: 241 GPTTTESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
            PTTTESE KA        DEF AWPLSDVDKMAIDPLQY HLS+RVDEEEEDYDEEE
Sbjct: 241 APTTTESETKAV-------DEFHAWPLSDVDKMAIDPLQYTHLSSRVDEEEEDYDEEE 282

[Close]

BLAST of CmaCh18G008300 vs. NCBI nr
Match: gi|449458702|ref|XP_004147086.1| (PREDICTED: dr1-associated corepressor [Cucumis sativus])

HSP 1 Score: 459.1 bits (1180), Expect = 5.7e-126
Identity = 251/299 (83.95%), Postives = 263/299 (87.96%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDIDELKK 120
           TMNS HLKHCVQSYSVFDFLRDIV RVPDYGHGHSDGAVDDRKRRKPLGDEGND DELKK
Sbjct: 61  TMNSLHLKHCVQSYSVFDFLRDIVGRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKK 120

Query: 121 IRMHDMSHGSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNKSPNPDVQM 180
            +MHDMSH STGRGRGRGRGRGRGRPAR+AERDN  PNP+ D CTSIENRNK+PNPDV M
Sbjct: 121 SKMHDMSHVSTGRGRGRGRGRGRGRPARSAERDNYQPNPDVDPCTSIENRNKNPNPDVHM 180

Query: 181 ENHVEPSKTSKEVSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAIIPEVPVEPT 240
           E+HVEPS T KEVSE ANQAIQNFDLNADV +T+EDS KT+ AAA      + + P+EP 
Sbjct: 181 EHHVEPSDTPKEVSE-ANQAIQNFDLNADV-STNEDS-KTVPAAA------VSDAPIEPA 240

Query: 241 GPTTT-ESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEEDYDEEE 299
            PTTT ESE KAA       DEFPAWPLSDVDKMAIDPLQY HLS+RVDEEEEDYDEEE
Sbjct: 241 APTTTTESETKAA-------DEFPAWPLSDVDKMAIDPLQYTHLSSRVDEEEEDYDEEE 283

[Close]

BLAST of CmaCh18G008300 vs. NCBI nr
Match: gi|743874523|ref|XP_011034688.1| (PREDICTED: dr1-associated corepressor homolog [Populus euphratica])

HSP 1 Score: 327.8 bits (839), Expect = 2.0e-86
Identity = 204/311 (65.59%), Postives = 229/311 (73.63%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR--KRRKPLGDEGNDID-E 120
           TMNS HLKHCVQSY+VFDFLR+IVS+VPDY HGHSD A D R  ++RKP  DE ND D E
Sbjct: 61  TMNSLHLKHCVQSYNVFDFLREIVSKVPDYSHGHSDAAADHRPLQKRKPTVDECNDSDEE 120

Query: 121 LKKIRMHDMSH-GSTGRGRGRGRGRGRGRPARTAERDNIPPN--PEADTCTSIENRNKSP 180
           LK+ RMH+ SH GS+GRGRGRGRGRGRGR AR  ER+    +  PE+ T  S+  +N S 
Sbjct: 121 LKRSRMHETSHAGSSGRGRGRGRGRGRGRGARNIERETSSRDLEPESSTAVSLSVKNNS- 180

Query: 181 NPDVQMENHVEPSKTSKE---VSEEANQAIQNFDLNADVVNTSEDSNKTIAAAA----AA 240
           NPDV M+N  E  ++ KE    S+ A+QA +NFDLNA+ VN SED+    AAAA    AA
Sbjct: 181 NPDVVMDNGSESKESVKENNIASDAASQAERNFDLNAE-VNDSEDAKAAAAAAATTTTAA 240

Query: 241 AAAIIPEVPVEPTGPTTTESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRV 299
           AAA           PTT      A  AA    +E+P W LS++DKMAIDPLQ A  STR 
Sbjct: 241 AAAATTTTAAAAAAPTTAAPSLSAEPAAETNHEEYPGWSLSEMDKMAIDPLQLAQFSTR- 300

[Close]

BLAST of CmaCh18G008300 vs. NCBI nr
Match: gi|596013213|ref|XP_007218701.1| (hypothetical protein PRUPE_ppa008839mg [Prunus persica])

HSP 1 Score: 325.5 bits (833), Expect = 9.8e-86
Identity = 196/319 (61.44%), Postives = 235/319 (73.67%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR---KRRKPLGDEGNDID- 120
           TMN+ HLKHCVQSY+VFDFLRDIVSRVPDYGHGHSD A +DR   KRRKP GDE  D D 
Sbjct: 61  TMNAVHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSDAAGEDRAISKRRKPPGDECIDSDE 120

Query: 121 ELKKIRMHDMSHG-STGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNK-SP 180
           ELK+ +M +++HG S+GRGRGRGRGRGRGR  R +ER+ +    E++ CTS+++  K +P
Sbjct: 121 ELKRSKMLEVNHGSSSGRGRGRGRGRGRGR-GRASERETLHHETESEPCTSLQHATKPNP 180

Query: 181 NPDVQMENHVEPSKTSKE---VSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAI 240
           NP + +++  E  +  KE   + +E++ A++NFDLNADV+    +  K  A AA AA A 
Sbjct: 181 NPGMVVDDASESKEEMKENAVIPDESDPAVRNFDLNADVI--ENEDTKAAATAAQAATAA 240

Query: 241 IPEVPVEPTGPTTTESEAKAAAAAAVAA-------------DEFPAWPLSDVDKMAIDPL 298
                      T +++ A A+ AAA AA             +E+P W LSDVDKMAIDPL
Sbjct: 241 QASSTATQAAATASQAAATASQAAATAAPTSSAGPTSEIKHEEYPGWSLSDVDKMAIDPL 300

[Close]

BLAST of CmaCh18G008300 vs. NCBI nr
Match: gi|224075888|ref|XP_002304814.1| (transcription factor family protein [Populus trichocarpa])

HSP 1 Score: 322.8 bits (826), Expect = 6.4e-85
Identity = 195/305 (63.93%), Postives = 229/305 (75.08%), Query Frame = 1


Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRT+EITLQRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTHEITLQRGAK 60

Query: 61  TMNSFHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDR--KRRKPLGDEGNDID-E 120
           TM++ HLKHCVQSY+VFDFLR+IVSRVPDY HGHSD   D R  ++RKP GDE ND D E
Sbjct: 61  TMSALHLKHCVQSYNVFDFLREIVSRVPDYSHGHSDSTGDHRPLQKRKPTGDECNDSDEE 120

Query: 121 LKKIRMHDMSH-GSTGRGRGRGRGRGRGRPARTAERDNIPPNPEADTCTSIENRNK-SPN 180
           LK+ RMH+MSH GS+GRGRGRGRGRGRGR AR  ER++   + E ++CT+++   K + N
Sbjct: 121 LKRSRMHEMSHAGSSGRGRGRGRGRGRGRGARNIERESSSRDLEPESCTTVQQSIKNNTN 180

Query: 181 PDVQMENHVEPSKTSKE---VSEEANQAIQNFDLNADVVNTSEDSNKTIAAAAAAAAAII 240
           P V M+N  E  ++ KE   VS+  NQ  +NFDLNA+ VN SED+    AAAA AAAA  
Sbjct: 181 PGVVMDNGSESKESVKENNRVSDATNQPERNFDLNAE-VNDSEDAK---AAAAPAAAAPA 240

Query: 241 PEVPVEPTGPTTTESEAKAAAAAAVAADEFPAWPLSDVDKMAIDPLQYAHLSTRVDEEEE 298
                  T  TT+   +    AA    +E+P W LS++DKM IDPLQ A LS R+DEEEE
Sbjct: 241 AAATTTTTTTTTSAPSSSVEPAAETNHEEYPGWSLSEMDKMVIDPLQLAQLSKRLDEEEE 300

The following BLAST results are available for this feature:

BLAST of CmaCh18G008300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NC2A_RAT	1.3e-24	52.73	Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1	[more]
NC2A_BOVIN	1.4e-23	52.29	Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1	[more]
NC2A_MOUSE	2.6e-22	39.76	Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=1 SV=3	[more]
NC2A_HUMAN	5.9e-22	40.22	Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3	[more]
DPB3_SCHPO	2.1e-19	57.83	DNA polymerase epsilon subunit C OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of CmaCh18G008300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPQ2_CUCSA	4.0e-126	83.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583350 PE=4 SV=1	[more]
M5XLH5_PRUPE	6.9e-86	61.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008839mg PE=4 SV=1	[more]
B9GXA0_POPTR	4.4e-85	63.93	Transcription factor family protein OS=Populus trichocarpa GN=POPTR_0003s19130g ...	[more]
A0A067L7U3_JATCU	2.2e-84	61.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24574 PE=4 SV=1	[more]
A0A061FR83_THECC	4.9e-84	61.74	Nuclear factor Y isoform 1 OS=Theobroma cacao GN=TCM_044728 PE=4 SV=1	[more]

BLAST of CmaCh18G008300 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12480.1	9.2e-66	51.08	nuclear factor Y, subunit C11	[more]
AT5G19490.1	2.9e-43	46.12	Histone superfamily protein	[more]
AT1G56170.1	9.4e-10	38.04	nuclear factor Y, subunit C2	[more]
AT3G48590.1	1.6e-09	40.51	nuclear factor Y, subunit C1	[more]
AT1G08970.4	1.6e-09	41.56	nuclear factor Y, subunit C9	[more]

BLAST of CmaCh18G008300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090303\|ref\|XP_008445943.1\|	2.0e-126	83.56	PREDICTED: dr1-associated corepressor [Cucumis melo]	[more]
gi\|449458702\|ref\|XP_004147086.1\|	5.7e-126	83.95	PREDICTED: dr1-associated corepressor [Cucumis sativus]	[more]
gi\|743874523\|ref\|XP_011034688.1\|	2.0e-86	65.59	PREDICTED: dr1-associated corepressor homolog [Populus euphratica]	[more]
gi\|596013213\|ref\|XP_007218701.1\|	9.8e-86	61.44	hypothetical protein PRUPE_ppa008839mg [Prunus persica]	[more]
gi\|224075888\|ref\|XP_002304814.1\|	6.4e-85	63.93	transcription factor family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003958	CBFA_NFYB_domain
IPR009072	Histone-fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G008300.1	CmaCh18G008300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 8..71 score: 5.4
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 3..72 score: 2.3
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 4..89 score: 9.84
None	No IPR available	unknown	Coil	Coil	coord: 280..298 scor
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..266 score: 6.8E
None	No IPR available	PANTHER	PTHR10252:SF40	SUBFAMILY NOT NAMED	coord: 2..266 score: 6.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G008300	Cucsa.076390	Cucumber (Gy14) v1	cgycmaB0124
CmaCh18G008300	Cla022908	Watermelon (97103) v1	cmawmB400
CmaCh18G008300	Csa5G583350	Cucumber (Chinese Long) v2	cmacuB418
CmaCh18G008300	MELO3C011797	Melon (DHL92) v3.5.1	cmameB352
CmaCh18G008300	ClCG11G013040	Watermelon (Charleston Gray)	cmawcgB339
CmaCh18G008300	CSPI05G20740	Wild cucumber (PI 183967)	cmacpiB424
CmaCh18G008300	CmoCh04G013690	Cucurbita moschata (Rifu)	cmacmoB425
CmaCh18G008300	CmoCh18G008330	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G008300	Lsi04G007450	Bottle gourd (USVL1VR-Ls)	cmalsiB380
CmaCh18G008300	Cp4.1LG09g04750	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G008300	Cp4.1LG01g09860	Cucurbita pepo (Zucchini)	cmacpeB434
CmaCh18G008300	MELO3C011797.2	Melon (DHL92) v3.6.1	cmamedB409
CmaCh18G008300	CsaV3_5G029530	Cucumber (Chinese Long) v3	cmacucB0499
CmaCh18G008300	Cla97C11G218950	Watermelon (97103) v2	cmawmbB409
CmaCh18G008300	Bhi07G000975	Wax gourd	cmawgoB0545
CmaCh18G008300	CsGy5G020240	Cucumber (Gy14) v2	cgybcmaB627
CmaCh18G008300	Carg02019	Silver-seed gourd	carcmaB1166
CmaCh18G008300	Carg14437	Silver-seed gourd	carcmaB1012

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G008300	CmaCh04G013020	Cucurbita maxima (Rimu)	cmacmaB407

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G008300	Cucumber (Gy14) v2	cgybcmaB624
CmaCh18G008300	Melon (DHL92) v3.6.1	cmamedB412
CmaCh18G008300	Silver-seed gourd	carcmaB1167
CmaCh18G008300	Cucumber (Chinese Long) v3	cmacucB0496
CmaCh18G008300	Watermelon (97103) v2	cmawmbB408
CmaCh18G008300	Wax gourd	cmawgoB0540
CmaCh18G008300	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh18G008300	Cucumber (Gy14) v1	cgycmaB0776
CmaCh18G008300	Cucurbita moschata (Rifu)	cmacmoB420
CmaCh18G008300	Wild cucumber (PI 183967)	cmacpiB420
CmaCh18G008300	Cucumber (Chinese Long) v2	cmacuB414
CmaCh18G008300	Melon (DHL92) v3.5.1	cmameB355
CmaCh18G008300	Watermelon (Charleston Gray)	cmawcgB338
CmaCh18G008300	Watermelon (97103) v1	cmawmB399
CmaCh18G008300	Cucurbita pepo (Zucchini)	cmacpeB429
CmaCh18G008300	Bottle gourd (USVL1VR-Ls)	cmalsiB384