CmaCh18G005990 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G005990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAN GTPase 3
Location	Cma_Chr18 : 5343648 .. 5345563 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTATTCTGAGGAGGAAAAAACAGAGGATTATCTTTTCAAGATTGTTTTAATTGGTGATTCAGCCGTGGGAAAATCAAATTTGCTCGCTCGATTTGCTCGAGATGAATTCTACCCTAACTCAAAATCAACCATCGGAGTCGAGTTTCAAACCCAAAAGATGGAAATAAATGGAAAGGAAATCAAAGCTCAGATATGGGATACTGCTGGACAAGAGCGATTTAGAGCTGTTACATCTGCTTATTATCGAGGAGCTGTTGGAGCTCTCGTGGTCTACGACATTAGCAGGCGTCCGACCTTTGACAGCATTGGAAGATGGCTCAATGAACTTCACAGTGAGTATTATAATAACAATGCGCTTTTTATTTGTAATGATATTGTCACGGTGTTAGGTTGTTTATGTCGGGAAGTTTTCGTCGTGTTTATAACCTGAAAGGACTGATTGGGTAATCGATGTTTTATTAAACAGCTCATTCCGACATGAACGTAGTAACCATACTGGTAGGCAACAAGTGTGATCTGAAGGATGGTAGAGAAGTAGGTACTGCTGAAGGGAAGGCTCTGGCAGAAGCTCAAGGTCTGTTCTTCATAGAAACCTCGGCCCTCGATTCCTCGAACGTAACAAACGCTTTCCAGACAGTCGTGAAGGAGATCTACAACATACTGAGCCGAAAAGTTATGATATCTGAAGAACATAAGAAGGATGGGAGATGGATGGAGAATGGAAGAAGTACCGTAGTGTTACATGGAAAGGAGGAAGTAGAAGAGGAGGCCAAAAGAGGTAGCTGTTGCTCATCCTAGTACTTTACATATTCCATTGTTCTGAAACCCTGCATCTTATGTTGTCTTCTCTGTAAACAATATTCATGTTTGTACTTGAAAATTAGGAGTTATTGATTTGATTTGATTTGATTTACTGGAGGAGTCGTGTTTGTACTTGAAAACGATCAGGGACGGGGGCACGAATATGTTCTCGTACTGGTTTAGCTGATGGGAAAAAATTAATTAACAAAACATTCCATCTTTATTGAAGAGTGAGTAGCACGCTGCGACCCACTCGAATAGTTTCTAATAATAAAAACCTAGATATGTTTGACACGTTTAATTAAAATAATTAACCTATCGAAAAGTCTAATTATCGTGTGATTGTATTAGGTAAGTTTTACACCGTTCAACCTGTCCATACCTAATACAATCACACGATAATTAGACTTTTCATACCTAATACAATATTTATGCAAGTTGTTATAAATCACACAATTTTCATTGTCCATCAACTCCATTCTTACTCTCTAACTCGAACAAAGGAATTGAATTCTACACTCTCTCTAACTATCTTTTTCGATTGGGTTGTCATCGTCAGAAAGTTGTATGATTCAGTGATCGTCATTGCATTTTGATTGAAATTGAGGGGTATTGTTGCCATGGTTTGTCTTAGATTGTCATCGCACACCCAGATTTGTGAGCAATCAACCACAGATAAGTCGGTAAGTCCTTGAACTTGATCCTTTGGGACATCAATTTTTATGAGTTTGGTGGCTATTTTATGTTAGATTTCATTAAGCATGGGTTGTGCAGTCATCAAATTGGTAGAGGAGTTAGGATAATCACCGTAGCTCGGTCACTGCCATTGAGCTATGCTGCATGAGTTGGTGTGGATCACTAGAGAACGACGAAAGGAAACGTGCAAGGATGCTAGTTTGTGCTTGGTAGTTTGTTTTGCATCTAATTCGATCTAGTTCAACATGCGCCTTGGTTCATTTCAATTCATGCTAGAGGTTCGGGTCAACAATCAACTAATTAACCGTCAACAGTTCAGTTGGACCGATTGAATTCAAGTTTTTCTCTTGATTCATTTTTAAAGTCTATTTACCCTAGATTTGTGTCAGAGCCATTACCTATCGACATGCA

mRNA sequence

ATGGCTTTTTATTCTGAGGAGGAAAAAACAGAGGATTATCTTTTCAAGATTGTTTTAATTGGTGATTCAGCCGTGGGAAAATCAAATTTGCTCGCTCGATTTGCTCGAGATGAATTCTACCCTAACTCAAAATCAACCATCGGAGTCGAGTTTCAAACCCAAAAGATGGAAATAAATGGAAAGGAAATCAAAGCTCAGATATGGGATACTGCTGGACAAGAGCGATTTAGAGCTGTTACATCTGCTTATTATCGAGGAGCTGTTGGAGCTCTCGTGGTCTACGACATTAGCAGGCGTCCGACCTTTGACAGCATTGGAAGATGGCTCAATGAACTTCACACTCATTCCGACATGAACGTAGTAACCATACTGGTAGGCAACAAGTGTGATCTGAAGGATGGTAGAGAAGTAGGTACTGCTGAAGGGAAGGCTCTGGCAGAAGCTCAAGGTCTGTTCTTCATAGAAACCTCGGCCCTCGATTCCTCGAACGTAACAAACGCTTTCCAGACAGTCGTGAAGGAGATCTACAACATACTGAGCCGAAAAGTTATGATATCTGAAGAACATAAGAAGGATGGGAGATGGATGGAGAATGGAAGAAGTACCGTAGTGTTACATGGAAAGGAGGAAGTAGAAGAGGAGGCCAAAAGAGATTGTCATCGCACACCCAGATTTGTGAGCAATCAACCACAGATAAGTCGTCATCAAATTGGTAGAGGAGTTAGGATAATCACCGTAGCTCGGTCACTGCCATTGAGCTATGCTGCATGAGTTGGTGTGGATCACTAGAGAACGACGAAAGGAAACGTGCAAGGATGCTAGTTTGTGCTTGGTAGTTTGTTTTGCATCTAATTCGATCTAGTTCAACATGCGCCTTGGTTCATTTCAATTCATGCTAGAGGTTCGGGTCAACAATCAACTAATTAACCGTCAACAGTTCAGTTGGACCGATTGAATTCAAGTTTTTCTCTTGATTCATTTTTAAAGTCTATTTACCCTAGATTTGTGTCAGAGCCATTACCTATCGACATGCA

Coding sequence (CDS)

ATGGCTTTTTATTCTGAGGAGGAAAAAACAGAGGATTATCTTTTCAAGATTGTTTTAATTGGTGATTCAGCCGTGGGAAAATCAAATTTGCTCGCTCGATTTGCTCGAGATGAATTCTACCCTAACTCAAAATCAACCATCGGAGTCGAGTTTCAAACCCAAAAGATGGAAATAAATGGAAAGGAAATCAAAGCTCAGATATGGGATACTGCTGGACAAGAGCGATTTAGAGCTGTTACATCTGCTTATTATCGAGGAGCTGTTGGAGCTCTCGTGGTCTACGACATTAGCAGGCGTCCGACCTTTGACAGCATTGGAAGATGGCTCAATGAACTTCACACTCATTCCGACATGAACGTAGTAACCATACTGGTAGGCAACAAGTGTGATCTGAAGGATGGTAGAGAAGTAGGTACTGCTGAAGGGAAGGCTCTGGCAGAAGCTCAAGGTCTGTTCTTCATAGAAACCTCGGCCCTCGATTCCTCGAACGTAACAAACGCTTTCCAGACAGTCGTGAAGGAGATCTACAACATACTGAGCCGAAAAGTTATGATATCTGAAGAACATAAGAAGGATGGGAGATGGATGGAGAATGGAAGAAGTACCGTAGTGTTACATGGAAAGGAGGAAGTAGAAGAGGAGGCCAAAAGAGATTGTCATCGCACACCCAGATTTGTGAGCAATCAACCACAGATAAGTCGTCATCAAATTGGTAGAGGAGTTAGGATAATCACCGTAGCTCGGTCACTGCCATTGAGCTATGCTGCATGA

Protein sequence

MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISEEHKKDGRWMENGRSTVVLHGKEEVEEEAKRDCHRTPRFVSNQPQISRHQIGRGVRIITVARSLPLSYAA

Homology

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BLAST of CmaCh18G005990 vs. Swiss-Prot
Match: RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.9e-94
Identity = 177/205 (86.34%), Postives = 190/205 (92.68%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSE++K+EDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+ING
Sbjct: 1   MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF SIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGKALAEAQGLFF+ETSALDSSNV  AF+TVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180

Query: 181 RKVMISEE-HKKDGRWMENGRSTVV 205
           RKVM S+E +K+D   + NG+  V+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVI 205

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BLAST of CmaCh18G005990 vs. Swiss-Prot
Match: RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.0e-71
Identity = 133/188 (70.74%), Postives = 160/188 (85.11%), Query Frame = 1


Query: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           S++E  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MEI GKE+K
Sbjct: 3   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRR TF+S+GRWL+EL THSD  V  +L
Sbjct: 63  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122

Query: 125 VGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKCDL+  R V   EGKALAE +GLFF+ETSALDS+NV  AF+ V+++IY  +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182

Query: 185 ISEEHKKD 193
            S+ +K +
Sbjct: 183 NSDTYKTE 190

[Close]

BLAST of CmaCh18G005990 vs. Swiss-Prot
Match: RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-71
Identity = 133/188 (70.74%), Postives = 160/188 (85.11%), Query Frame = 1


Query: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           S++E  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  NSK+TIGVEFQTQ MEI GKE+K
Sbjct: 3   SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVK 62

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALVVYDI+RR TF+S+GRWL+EL  HSD  V  +L
Sbjct: 63  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARML 122

Query: 125 VGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKCDL++ R V   EGKALAE +GLFF+ETSALDS+NV  AF+ V+ +IYN +SRK +
Sbjct: 123 VGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182

Query: 185 ISEEHKKD 193
            S+ +K +
Sbjct: 183 NSDTYKDE 190

[Close]

BLAST of CmaCh18G005990 vs. Swiss-Prot
Match: RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-71
Identity = 129/187 (68.98%), Postives = 163/187 (87.17%), Query Frame = 1


Query: 6   EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           ++E+ E+YLFKIV+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKE+KA
Sbjct: 4   DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGAVGALVVYDI+R  TF+++GRWL+EL+THSD  V  +L+
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123

Query: 126 GNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNKCDL+  R V   EGK+LAE++GLFF+ETSALDS+NV  AF+ V++EIY+ +SRK + 
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183

Query: 186 SEEHKKD 193
           S+ +K++
Sbjct: 184 SDSYKEE 190

[Close]

BLAST of CmaCh18G005990 vs. Swiss-Prot
Match: RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69
Identity = 129/187 (68.98%), Postives = 159/187 (85.03%), Query Frame = 1


Query: 6   EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           E+++ E+YLFKIVLIGDSAVGKSNLL+RF+RDEF  NSK+TIGVEFQTQ +EI GKE+KA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R  TF+S+ RWL EL+TH D  V  +LV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 126 GNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNKCDL+D R V   EGKALAE +GLFF+ETSALD++NV  AF+ V++EI+N +SRK++ 
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 186 SEEHKKD 193
           S+ +K +
Sbjct: 184 SDAYKAE 190

[Close]

BLAST of CmaCh18G005990 vs. TrEMBL
Match: A0A0A0LVS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181510 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.4e-103
Identity = 196/218 (89.91%), Postives = 207/218 (94.95%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK+EING
Sbjct: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGK+LAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKK-DGRWMENGRSTVVLHGKEEVEEEAKR 218
           RKVMIS+E KK D  WMENG++TVV+ G+++VE E K+
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKK 218

[Close]

BLAST of CmaCh18G005990 vs. TrEMBL
Match: Q41654_VICFA (Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.2e-100
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFY+EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV T EGKALAEAQGLFF+ETSALDSSNV +AFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKK-DGRWMENGRSTVVLHGKEEVEEEAKRDC 220
           RKVM+S+E KK D  W ENG++ V+  G  EVE E+K+ C
Sbjct: 181 RKVMMSQELKKQDTPWTENGKTVVLQEGDREVEVESKKGC 220

[Close]

BLAST of CmaCh18G005990 vs. TrEMBL
Match: W9RJG7_9ROSA (Ras-related protein RABA5a OS=Morus notabilis GN=L484_004266 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.1e-99
Identity = 192/216 (88.89%), Postives = 198/216 (91.67%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+ING
Sbjct: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQER RAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERVRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGKALAEAQGLFF+ETSALDSSNV  AFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVATAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKKDGRWMENGRSTVVLHGKEEVEEEAK 217
           RKVMIS+E KKD  WM NG+ TVVL G    E EA+
Sbjct: 181 RKVMISQELKKDPTWMGNGK-TVVLQGDGNQEAEAE 215

[Close]

BLAST of CmaCh18G005990 vs. TrEMBL
Match: A0A072VMV1_MEDTR (RAB GTPase-like protein C2B OS=Medicago truncatula GN=MTR_1g078200 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.6e-97
Identity = 187/221 (84.62%), Postives = 199/221 (90.05%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAF +EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MAFNNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV T EGKALAEAQGLFF+ETSALDSSNV  AFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTTEGKALAEAQGLFFMETSALDSSNVVAAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKK-DGRWMENGRSTVV-LHGKEEVEEEAKRDC 220
           RKVM+S+E KK D  W+ENG++ V+   G +  E E K+ C
Sbjct: 181 RKVMMSQELKKDDASWIENGKTVVLQQEGNQSAEGETKKGC 221

[Close]

BLAST of CmaCh18G005990 vs. TrEMBL
Match: A0A0B2Q453_GLYSO (Ras-related protein RABA5a OS=Glycine soja GN=glysoja_020942 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 4.4e-97
Identity = 189/221 (85.52%), Postives = 205/221 (92.76%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFY+EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+ING
Sbjct: 1   MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGKALAEAQGLFF+ETSALDSSNV  AF+TVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180

Query: 181 RKVMISEE-HKKDGRWMENGRSTVVLHGKEEVE-EEAKRDC 220
           RKVMIS+E +K+D   +ENG+ TVVL G+ +VE  ++K+ C
Sbjct: 181 RKVMISQELNKQDVTRIENGK-TVVLQGEGDVEAAQSKKGC 220

[Close]

BLAST of CmaCh18G005990 vs. TAIR10
Match: AT5G47520.1 (AT5G47520.1 RAB GTPase homolog A5A)

HSP 1 Score: 346.3 bits (887), Expect = 1.6e-95
Identity = 177/205 (86.34%), Postives = 190/205 (92.68%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSE++K+EDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+ING
Sbjct: 1   MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF SIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGKALAEAQGLFF+ETSALDSSNV  AF+TVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180

Query: 181 RKVMISEE-HKKDGRWMENGRSTVV 205
           RKVM S+E +K+D   + NG+  V+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVI 205

[Close]

BLAST of CmaCh18G005990 vs. TAIR10
Match: AT1G05810.1 (AT1G05810.1 RAB GTPase homolog A5E)

HSP 1 Score: 270.8 bits (691), Expect = 8.7e-73
Identity = 134/191 (70.16%), Postives = 161/191 (84.29%), Query Frame = 1


Query: 2   AFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGK 61
           A  S++E  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  NSK+TIGVEFQTQ MEI GK
Sbjct: 43  AMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGK 102

Query: 62  EIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVV 121
           E+KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDI+RR TF+S+GRWL+EL  HSD  V 
Sbjct: 103 EVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVA 162

Query: 122 TILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSR 181
            +LVGNKCDL++ R V   EGKALAE +GLFF+ETSALDS+NV  AF+ V+ +IYN +SR
Sbjct: 163 RMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSR 222

Query: 182 KVMISEEHKKD 193
           K + S+ +K +
Sbjct: 223 KQLNSDTYKDE 233

[Close]

BLAST of CmaCh18G005990 vs. TAIR10
Match: AT2G31680.1 (AT2G31680.1 RAB GTPase homolog A5D)

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-72
Identity = 133/188 (70.74%), Postives = 160/188 (85.11%), Query Frame = 1


Query: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           S++E  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MEI GKE+K
Sbjct: 3   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRR TF+S+GRWL+EL THSD  V  +L
Sbjct: 63  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122

Query: 125 VGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKCDL+  R V   EGKALAE +GLFF+ETSALDS+NV  AF+ V+++IY  +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182

Query: 185 ISEEHKKD 193
            S+ +K +
Sbjct: 183 NSDTYKTE 190

[Close]

BLAST of CmaCh18G005990 vs. TAIR10
Match: AT2G43130.1 (AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-72
Identity = 129/187 (68.98%), Postives = 163/187 (87.17%), Query Frame = 1


Query: 6   EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           ++E+ E+YLFKIV+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKE+KA
Sbjct: 4   DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGAVGALVVYDI+R  TF+++GRWL+EL+THSD  V  +L+
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123

Query: 126 GNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNKCDL+  R V   EGK+LAE++GLFF+ETSALDS+NV  AF+ V++EIY+ +SRK + 
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183

Query: 186 SEEHKKD 193
           S+ +K++
Sbjct: 184 SDSYKEE 190

[Close]

BLAST of CmaCh18G005990 vs. TAIR10
Match: AT3G07410.1 (AT3G07410.1 RAB GTPase homolog A5B)

HSP 1 Score: 264.2 bits (674), Expect = 8.2e-71
Identity = 129/187 (68.98%), Postives = 159/187 (85.03%), Query Frame = 1


Query: 6   EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           E+++ E+YLFKIVLIGDSAVGKSNLL+RF+RDEF  NSK+TIGVEFQTQ +EI GKE+KA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R  TF+S+ RWL EL+TH D  V  +LV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 126 GNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNKCDL+D R V   EGKALAE +GLFF+ETSALD++NV  AF+ V++EI+N +SRK++ 
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 186 SEEHKKD 193
           S+ +K +
Sbjct: 184 SDAYKAE 190

[Close]

BLAST of CmaCh18G005990 vs. NCBI nr
Match: gi|659127268|ref|XP_008463615.1| (PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-104
Identity = 198/220 (90.00%), Postives = 208/220 (94.55%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGK+LAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKK-DGRWMENGRSTVVLHGKEEVEEEAKRDC 220
           RKVMIS+E KK D  WMENG++TVV+ G+++VE E K+ C
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKKGC 220

[Close]

BLAST of CmaCh18G005990 vs. NCBI nr
Match: gi|449443538|ref|XP_004139534.1| (PREDICTED: ras-related protein RABA5a [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 3.4e-103
Identity = 196/218 (89.91%), Postives = 207/218 (94.95%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK+EING
Sbjct: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGK+LAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKK-DGRWMENGRSTVVLHGKEEVEEEAKR 218
           RKVMIS+E KK D  WMENG++TVV+ G+++VE E K+
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKK 218

[Close]

BLAST of CmaCh18G005990 vs. NCBI nr
Match: gi|560504|emb|CAA82710.1| (guanine nucleotide regulatory protein [Vicia faba])

HSP 1 Score: 372.9 bits (956), Expect = 4.6e-100
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFY+EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV T EGKALAEAQGLFF+ETSALDSSNV +AFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKK-DGRWMENGRSTVVLHGKEEVEEEAKRDC 220
           RKVM+S+E KK D  W ENG++ V+  G  EVE E+K+ C
Sbjct: 181 RKVMMSQELKKQDTPWTENGKTVVLQEGDREVEVESKKGC 220

[Close]

BLAST of CmaCh18G005990 vs. NCBI nr
Match: gi|703092645|ref|XP_010094689.1| (Ras-related protein RABA5a [Morus notabilis])

HSP 1 Score: 370.2 bits (949), Expect = 3.0e-99
Identity = 192/216 (88.89%), Postives = 198/216 (91.67%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+ING
Sbjct: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQER RAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERVRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV TAEGKALAEAQGLFF+ETSALDSSNV  AFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVATAFQTVVKEIYNILS 180

Query: 181 RKVMISEEHKKDGRWMENGRSTVVLHGKEEVEEEAK 217
           RKVMIS+E KKD  WM NG+ TVVL G    E EA+
Sbjct: 181 RKVMISQELKKDPTWMGNGK-TVVLQGDGNQEAEAE 215

[Close]

BLAST of CmaCh18G005990 vs. NCBI nr
Match: gi|502116641|ref|XP_004495529.1| (PREDICTED: ras-related protein RABA5a [Cicer arietinum])

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97
Identity = 187/222 (84.23%), Postives = 202/222 (90.99%), Query Frame = 1


Query: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MA Y+EEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MASYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRPTFDSIGRWLNELHTHSDMNV 120
           KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKCDLKDGREVGTAEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNK DLKD REV T EGKALAEAQGLFF+ETSALDSSNV  AFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTTEGKALAEAQGLFFMETSALDSSNVVAAFQTVVKEIYNILS 180

Query: 181 RKVMISEE-HKKDGRWMENGRSTVVLHG--KEEVEEEAKRDC 220
           RKVM+S+E +K+D  W+ENG++ V+  G  ++E E E K+ C
Sbjct: 181 RKVMMSQELNKQDPSWIENGKTVVLQEGDKEKEAEAETKKGC 222

The following BLAST results are available for this feature:

BLAST of CmaCh18G005990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA5A_ARATH	2.9e-94	86.34	Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1	[more]
RAA5D_ARATH	2.0e-71	70.74	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1	[more]
RAA5E_ARATH	2.6e-71	70.74	Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1	[more]
RAA5C_ARATH	2.6e-71	68.98	Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1	[more]
RAA5B_ARATH	1.4e-69	68.98	Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1	[more]

BLAST of CmaCh18G005990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVS7_CUCSA	2.4e-103	89.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181510 PE=4 SV=1	[more]
Q41654_VICFA	3.2e-100	86.36	Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1	[more]
W9RJG7_9ROSA	2.1e-99	88.89	Ras-related protein RABA5a OS=Morus notabilis GN=L484_004266 PE=4 SV=1	[more]
A0A072VMV1_MEDTR	2.6e-97	84.62	RAB GTPase-like protein C2B OS=Medicago truncatula GN=MTR_1g078200 PE=4 SV=1	[more]
A0A0B2Q453_GLYSO	4.4e-97	85.52	Ras-related protein RABA5a OS=Glycine soja GN=glysoja_020942 PE=4 SV=1	[more]

BLAST of CmaCh18G005990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47520.1	1.6e-95	86.34	RAB GTPase homolog A5A	[more]
AT1G05810.1	8.7e-73	70.16	RAB GTPase homolog A5E	[more]
AT2G31680.1	1.1e-72	70.74	RAB GTPase homolog A5D	[more]
AT2G43130.1	1.5e-72	68.98	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G07410.1	8.2e-71	68.98	RAB GTPase homolog A5B	[more]

BLAST of CmaCh18G005990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127268\|ref\|XP_008463615.1\|	1.4e-104	90.00	PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a [Cucumis melo]	[more]
gi\|449443538\|ref\|XP_004139534.1\|	3.4e-103	89.91	PREDICTED: ras-related protein RABA5a [Cucumis sativus]	[more]
gi\|560504\|emb\|CAA82710.1\|	4.6e-100	86.36	guanine nucleotide regulatory protein [Vicia faba]	[more]
gi\|703092645\|ref\|XP_010094689.1\|	3.0e-99	88.89	Ras-related protein RABA5a [Morus notabilis]	[more]
gi\|502116641\|ref\|XP_004495529.1\|	1.3e-97	84.23	PREDICTED: ras-related protein RABA5a [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G005990.1	CmaCh18G005990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 16..176 score: 7.4
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 13..172 score: 5.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 7..195 score: 2.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..187 score: 1.16
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 153..175 score: 7.2E-41coord: 38..54 score: 7.2E-41coord: 118..131 score: 7.2E-41coord: 56..78 score: 7.2E-41coord: 15..36 score: 7.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 7..222 score: 6.9E
None	No IPR available	PANTHER	PTHR24073:SF430	RAS-RELATED PROTEIN RABA5A	coord: 7..222 score: 6.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..178 score: 1.1
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 17..178 score: 1.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 15..178 score: 6.6E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 20..219 score: 3.
None	No IPR available	PROFILE	PS51419	RAB	coord: 10..220 score: 3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G005990	Cla009038	Watermelon (97103) v1	cmawmB381
CmaCh18G005990	Csa1G181510	Cucumber (Chinese Long) v2	cmacuB399
CmaCh18G005990	MELO3C025545	Melon (DHL92) v3.5.1	cmameB366
CmaCh18G005990	CSPI01G15800	Wild cucumber (PI 183967)	cmacpiB403
CmaCh18G005990	CmoCh18G005950	Cucurbita moschata (Rifu)	cmacmoB411
CmaCh18G005990	CmoCh13G004070	Cucurbita moschata (Rifu)	cmacmoB396
CmaCh18G005990	Lsi02G011230	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G005990	Cp4.1LG09g06500	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G005990	Cp4.1LG20g06630	Cucurbita pepo (Zucchini)	cmacpeB444
CmaCh18G005990	CsaV3_UNG049340	Cucumber (Chinese Long) v3	cmacucB0510
CmaCh18G005990	Cla97C01G010380	Watermelon (97103) v2	cmawmbB394
CmaCh18G005990	Bhi08G000633	Wax gourd	cmawgoB0535
CmaCh18G005990	Carg25110	Silver-seed gourd	carcmaB1436

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G005990	CmaCh13G003820	Cucurbita maxima (Rimu)	cmacmaB212

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G005990	Cucumber (Chinese Long) v3	cmacucB0476
CmaCh18G005990	Cucumber (Chinese Long) v3	cmacucB0509
CmaCh18G005990	Watermelon (97103) v2	cmawmbB402
CmaCh18G005990	Wax gourd	cmawgoB0515
CmaCh18G005990	Cucurbita maxima (Rimu)	cmacmaB211
CmaCh18G005990	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G005990	Cucurbita maxima (Rimu)	cmacmaB399
CmaCh18G005990	Cucumber (Gy14) v1	cgycmaB0040
CmaCh18G005990	Cucumber (Gy14) v1	cgycmaB0514
CmaCh18G005990	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G005990	Cucurbita moschata (Rifu)	cmacmoB395
CmaCh18G005990	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G005990	Cucurbita moschata (Rifu)	cmacmoB419
CmaCh18G005990	Cucurbita moschata (Rifu)	cmacmoB428
CmaCh18G005990	Wild cucumber (PI 183967)	cmacpiB428
CmaCh18G005990	Cucumber (Chinese Long) v2	cmacuB425
CmaCh18G005990	Watermelon (Charleston Gray)	cmawcgB341
CmaCh18G005990	Watermelon (Charleston Gray)	cmawcgB349
CmaCh18G005990	Watermelon (97103) v1	cmawmB389
CmaCh18G005990	Cucurbita pepo (Zucchini)	cmacpeB419
CmaCh18G005990	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G005990	Bottle gourd (USVL1VR-Ls)	cmalsiB367
CmaCh18G005990	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G005990	Cucumber (Gy14) v2	cgybcmaB771
CmaCh18G005990	Melon (DHL92) v3.6.1	cmamedB414
CmaCh18G005990	Silver-seed gourd	carcmaB0060
CmaCh18G005990	Silver-seed gourd	carcmaB0562
CmaCh18G005990	Silver-seed gourd	carcmaB0907