CmaCh18G005820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGGCCTCCCTCAATCTCGAACACACGAGACGGTGTTTGAAGGAGTTAATGTTTGAAAAGAGAGCAGAAATAACAGGTTATTTTCTTTCTTTTTGAAGTTTGACGTCTATTTGTTTTCTAGTTTGGTCTGCAGCGTCCTGTCTCAGCCTAATTTATGTGTTTGACGATGCCTGATCCAGATTCAGATTAAGTATTGAAATCTTACTTCAAAAACACTCATAACTGTTGAATGCTACTGGTTTGGAGTCGGTTCTCGTTTGATTTAAGTTCCATCTACCTTAATGACGGATGTTTTATATTTGAAAAAAATAAGTTCATGGATGCTGAGTAAATCTTAATTTGTTTTTCTTTTTCTGGTTTCAATTTTGTTTGTGATGAATGAAATGATTCTCTATGCTCGTATTTGACAACTTGTTTGAAGATTCTTATAAACATAAATTGCTGTATTGTGCAAATTGTGAAGGAGGGGATCGATTAAGGTTGATAAAAACTATGTTTGGTTATTGTAAATTGTGAAGTTTATCTATCTTACTGATTTGCTGAGTTCTCTTTGCATTTTATATAGTACCAATGGAAGAAAGTTTCATTTAGTTTTTGTAATCTTGCGTCCCATTCATCTAGTAATGATATCAATTCCTCTGAACTTTTTAACTCTAAAGTACTCACTTCCTTATATTTCGATTTAAAGTTATGCACTGAAAGTTAAGTGTTAAATTTGATTAGTTGGAATACACCTGCATTTCCTTTGAGTAACTTGTGTCTTTGGTCCTCATGCTAATATGGTATTGTAATGCTGATAAGCGCCAACAATAGCTAAATTTGTAAAGCTAGAGGTCCTTTTAGGATTCTTGCAAACCTTCACAGCTAACTTAATGAATGATTCCAACTAAGAGCTAGTTAGAAGGATGATGGTCACTCTTAGATCCCGAGACGACTCACCCCAGAATTAGTTTGATCAAGACTAATCCAATAAATCGGTTTAACTTCAAACCTAAATCAAGATTTGAAATCAAGACACAAGATTTTTGTATTCAAATATGATTTTTAAACTTGAATATTACATAACTCTAAAAACATAATCCAAACATATTGGTCAACTACTAACTACCCGTCAAGGCTATTAAATAAAAATGGAAGAAAATAAAAGAAAATAAGACATGACATAAATAGTCTTGATTGGTAGGTAGTTCAACTACCAAAGACAAAGTCTTCAAATCACTCCTCAATGTCAAGTTTATTCTTTTCTTGATTTGATATACTAATATTATAAAGATTTGATATACTAAATAAATCTTTGTTTCAACTTACATTAGCGAGACTTTGAAGATGTAATGTAAAGGTCATCTTCTTTACTCTGCTTCTTGGAATCGCTCTTTCGGGTATATGCAAATATTAATGGTTGGATTCATATCAAATGCCCAAGCTTTTGTTCGCTTATCTCATTAATTCATGTGGTTTGTGCCCATTGTGGCCTTCGCTGCCATGAATAGCTAGGCTGGGGAGGGAATCAAATGAGAGGATATCTTCCTCTGTGTAGGGTGCTAAGAAAGGAGTTAGACTTTGGGAACTCATGGGACCGAAATTTTAAAGGTTGATCGTTTGGCTTCATGCCCTGCAGAAACCCGTTTAGATATGGTTTTCTACATTGAAGTATTTTGAGACTAGTTGCACACAAATGGTAGTTAATATTGGATTTACTTTTTGATAAGAAGCATATTCCATTGATCATATAAAATATATGCGACAAGGAGTCGATAAAAGGCCAAAAGAGTTAAGAAAAAAACATCTCCAATTCGCATTGACTAAAGAAAACATGATCTGGATCTTAAACACCATTGAATATCTTATGGCAGCTGATGTTTTAGTTTATGGGATTGTACTTTCATTTGTTTTTTGAAACTGTAATTCAAACACTCATAATATTAGCAGGTCATTTGGTTTGCAATGGATTCTAGCACCAATGAAGGCAGCTATAACACTCAACCTAAGTGGAGAAAAGTGGCATATGGAGGTATGCAACCCGGGTTCGATGACAACCACACCGACGAGTCTTTTCTTGAAGATATCGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATTTCTGAATATCTATGCATCGTCGCCCTTGTCGGTCTGGTTTGGACATACACACTTAGATCGACTCTCGACGAGAATTCCCTCTTATTTCTTGACATTAGTCTTCTAGCTTCTGGATTTCTAATTCTTCTTTTCACTGAAGAAACACTCTCATTGAACCTTCTCCTCCACTATTTTCTCAATATATCATTTTTCACAACTGGGTTGTATGTCTTGGCTCCCATCTACCAAACTCTTACTAAATCCATTAGTTCAGATTCCATTTGGGCATTGACTGTTTCACTTATTATCCTCCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGAGCTCCTGGTAATCTTAAGAACCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATTGTGGCCTCTGTTCTTATCGCTTCACGTCTTCCATCTCGGTTACACGTGTTCGCCATAATGTTATTCTCCTTACAAATTTTCCTTTTTGCCCCTTTGGTTACTTACTCTATTAAGAAGTACTCTGTTCATCTGCATCTCTTATTCTCTCTCTGTTTGATGACAGTCACCTTGGTGTATGTTTATTTCCTACATCAGTTGTTTTTCATATTGTTGGCAAGTCTATTGATTTTTGTTACAGTAGTTTGTCCTTATTGGCTTATACGAATTCAGGAATTCAAGTTTGAGATCAATGGTCCCTGGGATGAGGCCAAGCTTTGTTTTGATATTAGAGATTGAGATTATGTATAGAAAGGGTAGCGGAAACACGAGTTTCTAATATTAAGAACTAGAGAAAAGACTAGTTCGATCGATGTAGAATTGTATTTTGAATGGTT ATGCTTGGCCTCCCTCAATCTCGAACACACGAGACGGTGTTTGAAGGAGTTAATGTCATTTGGTTTGCAATGGATTCTAGCACCAATGAAGGCAGCTATAACACTCAACCTAAGTGGAGAAAAGTGGCATATGGAGGTATGCAACCCGGGTTCGATGACAACCACACCGACGAGTCTTTTCTTGAAGATATCGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATTTCTGAATATCTATGCATCGTCGCCCTTGTCGGTCTGGTTTGGACATACACACTTAGATCGACTCTCGACGAGAATTCCCTCTTATTTCTTGACATTAGTCTTCTAGCTTCTGGATTTCTAATTCTTCTTTTCACTGAAGAAACACTCTCATTGAACCTTCTCCTCCACTATTTTCTCAATATATCATTTTTCACAACTGGGTTGTATGTCTTGGCTCCCATCTACCAAACTCTTACTAAATCCATTAGTTCAGATTCCATTTGGGCATTGACTGTTTCACTTATTATCCTCCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGAGCTCCTGGTAATCTTAAGAACCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATTGTGGCCTCTGTTCTTATCGCTTCACGTCTTCCATCTCGGTTACACGTGTTCGCCATAATGTTATTCTCCTTACAAATTTTCCTTTTTGCCCCTTTGGTTACTTACTCTATTAAGAAGTACTCTGTTCATCTGCATCTCTTATTCTCTCTCTGTTTGATGACAGTCACCTTGGTGTATGTTTATTTCCTACATCAGTTGTTTTTCATATTGTTGGCAAGTCTATTGATTTTTGTTACAGTAGTTTGTCCTTATTGGCTTATACGAATTCAGGAATTCAAGTTTGAGATCAATGGTCCCTGGGATGAGGCCAAGCTTTGTTTTGATATTAGAGATTGAGATTATGTATAGAAAGGGTAGCGGAAACACGAGTTTCTAATATTAAGAACTAGAGAAAAGACTAGTTCGATCGATGTAGAATTGTATTTTGAATGGTT ATGCTTGGCCTCCCTCAATCTCGAACACACGAGACGGTGTTTGAAGGAGTTAATGTCATTTGGTTTGCAATGGATTCTAGCACCAATGAAGGCAGCTATAACACTCAACCTAAGTGGAGAAAAGTGGCATATGGAGGTATGCAACCCGGGTTCGATGACAACCACACCGACGAGTCTTTTCTTGAAGATATCGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATTTCTGAATATCTATGCATCGTCGCCCTTGTCGGTCTGGTTTGGACATACACACTTAGATCGACTCTCGACGAGAATTCCCTCTTATTTCTTGACATTAGTCTTCTAGCTTCTGGATTTCTAATTCTTCTTTTCACTGAAGAAACACTCTCATTGAACCTTCTCCTCCACTATTTTCTCAATATATCATTTTTCACAACTGGGTTGTATGTCTTGGCTCCCATCTACCAAACTCTTACTAAATCCATTAGTTCAGATTCCATTTGGGCATTGACTGTTTCACTTATTATCCTCCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGAGCTCCTGGTAATCTTAAGAACCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATTGTGGCCTCTGTTCTTATCGCTTCACGTCTTCCATCTCGGTTACACGTGTTCGCCATAATGTTATTCTCCTTACAAATTTTCCTTTTTGCCCCTTTGGTTACTTACTCTATTAAGAAGTACTCTGTTCATCTGCATCTCTTATTCTCTCTCTGTTTGATGACAGTCACCTTGGTGTATGTTTATTTCCTACATCAGTTGTTTTTCATATTGTTGGCAAGTCTATTGATTTTTGTTACAGTAGTTTGTCCTTATTGGCTTATACGAATTCAGGAATTCAAGTTTGAGATCAATGGTCCCTGGGATGAGGCCAAGCTTTGTTTTGATATTAGAGATTGA MLGLPQSRTHETVFEGVNVIWFAMDSSTNEGSYNTQPKWRKVAYGGMQPGFDDNHTDESFLEDIVMNANVVKRDILKVMLDSVSISEYLCIVALVGLVWTYTLRSTLDENSLLFLDISLLASGFLILLFTEETLSLNLLLHYFLNISFFTTGLYVLAPIYQTLTKSISSDSIWALTVSLIILHLFLHDYSGSTVRAPGNLKNPSLTSCISLNASIVASVLIASRLPSRLHVFAIMLFSLQIFLFAPLVTYSIKKYSVHLHLLFSLCLMTVTLVYVYFLHQLFFILLASLLIFVTVVCPYWLIRIQEFKFEINGPWDEAKLCFDIRD
BLAST of CmaCh18G005820 vs. Swiss-Prot
Match: PIGC_DICDI (Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.8e-40 Identity = 105/296 (35.47%), Postives = 179/296 (60.47%), Query Frame = 1
BLAST of CmaCh18G005820 vs. Swiss-Prot
Match: GPI2_SCHPO (Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.4e-23 Identity = 90/290 (31.03%), Postives = 153/290 (52.76%), Query Frame = 1
BLAST of CmaCh18G005820 vs. Swiss-Prot
Match: PIGC_RAT (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.8e-23 Identity = 89/294 (30.27%), Postives = 152/294 (51.70%), Query Frame = 1
BLAST of CmaCh18G005820 vs. Swiss-Prot
Match: PIGC_BOVIN (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Bos taurus GN=PIGC PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.6e-23 Identity = 90/291 (30.93%), Postives = 151/291 (51.89%), Query Frame = 1
BLAST of CmaCh18G005820 vs. Swiss-Prot
Match: PIGC_HUMAN (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.9e-23 Identity = 88/291 (30.24%), Postives = 154/291 (52.92%), Query Frame = 1
BLAST of CmaCh18G005820 vs. TrEMBL
Match: A0A0A0LTI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196250 PE=4 SV=1) HSP 1 Score: 531.6 bits (1368), Expect = 6.9e-148 Identity = 279/303 (92.08%), Postives = 294/303 (97.03%), Query Frame = 1
BLAST of CmaCh18G005820 vs. TrEMBL
Match: A0A061EMI1_THECC (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative isoform 1 OS=Theobroma cacao GN=TCM_021016 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 5.9e-131 Identity = 248/303 (81.85%), Postives = 276/303 (91.09%), Query Frame = 1
BLAST of CmaCh18G005820 vs. TrEMBL
Match: A0A061EVD3_THECC (Phosphatidylinositolglycan synthase family protein isoform 2 OS=Theobroma cacao GN=TCM_021016 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 5.9e-131 Identity = 248/303 (81.85%), Postives = 276/303 (91.09%), Query Frame = 1
BLAST of CmaCh18G005820 vs. TrEMBL
Match: W9QRM8_9ROSA (Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Morus notabilis GN=L484_020865 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.3e-125 Identity = 240/303 (79.21%), Postives = 265/303 (87.46%), Query Frame = 1
BLAST of CmaCh18G005820 vs. TrEMBL
Match: A5BDR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01260 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.8e-125 Identity = 240/303 (79.21%), Postives = 267/303 (88.12%), Query Frame = 1
BLAST of CmaCh18G005820 vs. TAIR10
Match: AT2G34980.1 (AT2G34980.1 phosphatidylinositolglycan synthase family protein) HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-122 Identity = 229/291 (78.69%), Postives = 263/291 (90.38%), Query Frame = 1
BLAST of CmaCh18G005820 vs. NCBI nr
Match: gi|659118156|ref|XP_008458975.1| (PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C isoform X1 [Cucumis melo]) HSP 1 Score: 542.3 bits (1396), Expect = 5.6e-151 Identity = 285/308 (92.53%), Postives = 296/308 (96.10%), Query Frame = 1
BLAST of CmaCh18G005820 vs. NCBI nr
Match: gi|449465417|ref|XP_004150424.1| (PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Cucumis sativus]) HSP 1 Score: 531.6 bits (1368), Expect = 9.9e-148 Identity = 279/303 (92.08%), Postives = 294/303 (97.03%), Query Frame = 1
BLAST of CmaCh18G005820 vs. NCBI nr
Match: gi|659118158|ref|XP_008458976.1| (PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C isoform X2 [Cucumis melo]) HSP 1 Score: 530.8 bits (1366), Expect = 1.7e-147 Identity = 280/303 (92.41%), Postives = 291/303 (96.04%), Query Frame = 1
BLAST of CmaCh18G005820 vs. NCBI nr
Match: gi|590660004|ref|XP_007035282.1| (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 475.3 bits (1222), Expect = 8.4e-131 Identity = 248/303 (81.85%), Postives = 276/303 (91.09%), Query Frame = 1
BLAST of CmaCh18G005820 vs. NCBI nr
Match: gi|590660007|ref|XP_007035283.1| (Phosphatidylinositolglycan synthase family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 475.3 bits (1222), Expect = 8.4e-131 Identity = 248/303 (81.85%), Postives = 276/303 (91.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |