ClCG01G009960 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACTCACCACATTCTCTCGTGACAACTCACGCACGTTAGGTCCAATGAAAAAGGGAAAAAAAAACCTTCAACCGCCGGCACTTTGCTCTGACTTTGTCCGCATCACCACTTGCCGGCCGCCTACGTCTGCGGTGCCACTCGCCTAATTGTCGTTCGCCGCCGGTAAGCTTCTAGCTGTCTCTTTTTCTCATTCTCTCTCACATTCTGGTTGCAGCATCGCCCAGCCACCACGCAACTCCTACGCCTCTGATCATTCATTTCTACCACGCTACTGTCCGAGCTCCTTGTATGTTGTTGCCACACTACCGTCGTTGGATTAGCTGTGGGTAAGGGTTTAAGTGTAGTTTCTTGGGTTTTTCTTGGAAATATTGAAAACCTTTTGTGTTTCGACATGAATTCAATATTTACCCATAATATTTGAATCTTAGAATTGTGAAATCAAGCACATTCGAACACCTATCAGTGCACATTCGAAGCCTTTGGTTCAAACAGTTCCAAACACCCACCAAGGAATTGGGTCTTTTCCGGTGAATTGCAGGTGGTAAACTTCTATTTTGACCATTTCGGAGTCAATTAAGGTGTGTTAGATATGCCTCTAACCTTGAAACATCTCTGTTTTAGGATCCGATTCAATTATGGAGTGTTCAAATTAGCTTTTGAGGCAAAATTTAGGTAAGATTATCTCTCTTCATAGCTCTTTCAGTTTTGAATAAGGATTTTGAATTCAATTCTAATTTAAGTGTTGGCTTCTTGCCTCTTTGGTTTATTTTAGGACTGCTAGAATCATTGTAAGTGCTAAGTAGTTTCTACTTGTTAGGTCTGTTTACTACGTTAGCATGCTGCATATTTTACTTGTTTCATTCCTGTATGTGATGTATATTTTTATGAACTGTACTATTGTCTTGTGATGAATGTATATCTTTATGAATTGTGCTGTCTTGTGATAAATCTTGGACATGCTGAGCTGTATGAATTGTTCTATTGTCTATTGTCGTGTGATGAATTTATATATTCTTCAGTTTGTCGGAAAAGCATGGTGTTTATGTTGAGAGTTGCTGTGTGTTTATGTAAATAGCTAGTTCATATGGATTTGGATGCATGTACTTTGTAGTTAAAGATTCTTGATGATGTCTGGTTATAAATTGATATGTTTGTAGTAGAGTTGTGTTGGTTAAGAGTGTGAAGTTATCATTGTGTCGAAGTTGAGAAAGTATAGAGGTTGAGTAATCCCTCAAAATGATCTAAAAGAAGATCCTCGTTGAATCCCTATAGCCGTTTATGATGTACAATCAATTGAACGGCATGTGACATTATAATTGAGGAGAGTGAAAATTGTATCAAGAAAACTTGTGAAATCGTTTAACCTAAAAGTGGACCCTCATCGCAATCCTTACAAATTCAGTTGGATCAAAAAAGGGGAGAGGCACAAATATAGGAAATTTGTATGGTACATATCTATCGAAAATGCCTATAAAGAGATCTGATTGTTTGTGACATGAGATGGATGTTTATCACATTCTTCTAGGACCACCACGATAGTATGATACTCAATCACTACGTAGAGGTAGGGGAAACACTTGTGAATTAACGTGGATGGGCAAGAAGACTGTTGCTTCCTTTGGGCAAAAACACATGAAGAAATGGTTAGACCAAGTAATAACACAAAAGACCAATTGTTTACCACTCGAAGTGAAAAAGAATTCTTGTGCCAAAGAGAAGGGATACTATTGGGCCTTGTGGTGTGGGAAACGATCCAACTTCAAGTTCAATAGATATCCCAATTGAAGTTCAAACATTACTTAAAAAATTTTCTAACATCAAGGACTTTCCTTTTTGCACTTCCACCATTACAAGATATACAACATCATGTTGACTTTGTTCCTGGCTCAACAATATCACACCTTCTGCATTACAATACAAGTCCAAAGGAGTATGGAATTCTTCATGAACAAGTTCAAGATCTTCTCCAAAAGCAACATATTCAGCCAAGTTTGAGTCCATGTGTGATGTGCTATCCCTGCTTTATTAACACCAAAGAAGGATGGTAGTTGGAGAGTGTGGATAGCAAGGCAATAAATAAGATTATCATTAAATACCATTTTCCAATTCCACAAATTGATGACCTATTTGATTGATTGGGAGGAGCTACAATATTCTCCAAAGTCACCTTCAAAGTGGGTATCATTAAATAAGTATTCAACTAGAGGACGAGTGGAAAATGACATTCAAAGTCAATGAGGGTTTATTTTTTTATTATTTTCTTTCCTTTTTTTTGGGACAATTTGCTTGACCCTACAACATTTTGGTGTCAAGGAAATTCATTGGGAGGTGGCCACCATGGATTAAACCCATGACCTCTAAGCCATTTATTGAGACTATGCCCTTTTTTTACCACTAGGCCAACCCATGATGGTTAATCAATGAAAGTTCATTCAAATGGGCTAAAATGCTCCAAGCACTTTCACGATGTTAATGAATCAGGTTCTTCATCCATTTCCTTCACAAATTTATGGTTATATGTTTTGATGACATATTAGTTATAGTTTATAGCAAAACTACAAAAGGACACCGGAACACCTAAATTGCCGTCTTTGACAATCTAACCAATTATACATCAACCCCAAAAAATTCCTTCTCCTTATTAGGGAAATAATTTTTGGTTTTATCATTGGGGATTCGGGAATTGAGGTTGACCCTAGGAAGATTCAAGCCATTACTAATTGGCCCCCGCCAAAGTTTGTGAAGGACATTCAAGCTTTTCTCAGTCTTGCTTCTTTTTTATAGAAAGTTCATAACTTTTTTTTTAATTTGTTACTACGCCCTTGACAAATTGCTTGAGAAAAGGAAATTTTGAATGGGGTTTTGATCAACTACATATTTGTTATGCTATTAAAAATAAATGAGTGAATAGCCCTATTTTGAAGCTCCCCAACTTTGCACTTCCTTTTGAGGTGCCCATGGATGCTTGTGGTGTAAGAGTTGGGGTGTTTTGCCTTAAAATGGCCATCCTATTCAATATTTTTGTGAGAAACTTAGCCCCTCTAACAGAGTTGGAGCAAGTGTGGTTTACACCATTGCTTTTTGTCCTTGTTAACTATTAGGTGTGGCTAAAGGCAGAGGTTGTAGTGCTACTGATTGAGGAGGTGCTTTTAAACCCTTCCTTTTAGGATAAGGGCAAAATTTTGTGACACTTGTTTCTTTGCGGTGTTGGGGAATTTGACTTGAGAGGAACAAGATAACCTTTTAGAGAGGTCGAGAGATTGGGGAGGTGGTTAGGTTTAATATGTTCTTATGGGTATTTGTTACCAAACCTTTTTTTAATTGATTTGATTCTTTTGGATTGGATTCTGTAAGACTTCTCTCCAAGAAGTTAAGAAATGTTTTGTATTTATAGCCAAAATTACAACACTCCACCATTCGGGAGGGTGGTACTCTCCCAAACTGGACAACCCAGAGCTAAGACAAAAGATAACTTAAAAGTTTACACAAAATACTATTTATAGTTCGTTCGCCCGCCACTAGTGGGGTGAATTTCCCCTTCTACCCCTCCTAACACAAGTGTGTAATATTGGTGGCCTAACAGATTCCTTTTATGTTGTTACGTGGTTCCTCCTTTTCTGTAGTGATGTGATTACTCCTTTTTTGTGGGCATGTTTTTTTGTATACACTTGTTTTTTTCTGTCATTTTTCCCAAGCCTTGTTTTAAAATAAATATATTATGCCAGCTGATCTCCAAGTATATGGAACTTGACTTTCATTTGTTTTTAGAGATACTTAAGGACTTCTAATAGTAGCAGGTCATTTGGTTTGCCATGGATTCTAGCACGAGTGGAGACAGTTATCACACACAGGCCAAATGGAGAAAAGTGGCATATGGAGGTATGCAACCTGGGTTTGATGACAACCACACTGACGAGTCTTTTCTTGAAGATATTGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATATCCGAATATCTGTGCATCGTCACTCTTGTTGGCTTGGTTTGGACATACACACTTAGATCGACTCTTGATGAGAATTCCCTCTTATTTCTTGACATTGGCCTTCTTGGTTCAGGATTTCTAATTCTTCTTTTCACTGAAGGCTCACTCTCATTGAGCCTTCTCTTGCACTATTTTCTTAATATATCCTATTTCACAACGGGGTTGTATGTCTTAGCTCCCATCTACCAAACTCTGACTAGATCCATTAGCTCAGATTCCATTTGGGCATTGGCTGTTTCACTTATTATCCTTCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGGGCTCCTGGGGATCTTAAGAATCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATCGTGGCCTCTGTTCTTATCGCTTCACGTCTGCCATCTCGACTACATGTGTTCGGCATTATGTTGTTCTCATTGCAAGTTTTCCTTTTTGCTCCACTTGTTATTTACTCTATTAAGAAGTATTCTCTTCATCTGCATCTCTTATTTTCTTTCTGTTTAATAACAGTTACCTTAGTGTATGTTTATTTCTTACACCAGTTATTTTTCATACTTTTGGCGAGTCTATTGATTTTTGTAACCGTAGTTTGTCCTTATTGGCTCATACGAATCCAGGAATTTAAGTTTGAGATCAATGGTCCCTGGGACGAGGCCAAGCTTTGTTTTGATATTAGAGATTGAGATTCTGTATAGAAAGGGTAGGAAAGAAAAAGCAAGAACTTGAGAAACATTATTTCAATG GAAAAACTCACCACATTCTCTCGTGACAACTCACGCACGTTAGGTCCAATGAAAAAGGGAAAAAAAAACCTTCAACCGCCGGCACTTTGCTCTGACTTTGTCCGCATCACCACTTGCCGGCCGCCTACGTCTGCGGTGCCACTCGCCTAATTGTCGTTCGCCGCCGGTAAGCTTCTAGCTGTCTCTTTTTCTCATTCTCTCTCACATTCTGGTTGCAGCATCGCCCAGCCACCACGCAACTCCTACGCCTCTGATCATTCATTTCTACCACGCTACTGTCCGAGCTCCTTGTATGTTGTTGCCACACTACCGTCGTTGGATTAGCTGTGGGATCCGATTCAATTATGGAGTGTTCAAATTAGCTTTTGAGGCAAAATTTAGCCAAAATTACAACACTCCACCATTCGGGAGGGTGGTCATTTGGTTTGCCATGGATTCTAGCACGAGTGGAGACAGTTATCACACACAGGCCAAATGGAGAAAAGTGGCATATGGAGGTATGCAACCTGGGTTTGATGACAACCACACTGACGAGTCTTTTCTTGAAGATATTGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATATCCGAATATCTGTGCATCGTCACTCTTGTTGGCTTGGTTTGGACATACACACTTAGATCGACTCTTGATGAGAATTCCCTCTTATTTCTTGACATTGGCCTTCTTGGTTCAGGATTTCTAATTCTTCTTTTCACTGAAGGCTCACTCTCATTGAGCCTTCTCTTGCACTATTTTCTTAATATATCCTATTTCACAACGGGGTTGTATGTCTTAGCTCCCATCTACCAAACTCTGACTAGATCCATTAGCTCAGATTCCATTTGGGCATTGGCTGTTTCACTTATTATCCTTCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGGGCTCCTGGGGATCTTAAGAATCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATCGTGGCCTCTGTTCTTATCGCTTCACGTCTGCCATCTCGACTACATGTGTTCGGCATTATGTTGTTCTCATTGCAAGTTTTCCTTTTTGCTCCACTTGTTATTTACTCTATTAAGAAGTATTCTCTTCATCTGCATCTCTTATTTTCTTTCTGTTTAATAACAGTTACCTTAGTGTATGTTTATTTCTTACACCAGTTATTTTTCATACTTTTGGCGAGTCTATTGATTTTTGTAACCGTAGTTTGTCCTTATTGGCTCATACGAATCCAGGAATTTAAGTTTGAGATCAATGGTCCCTGGGACGAGGCCAAGCTTTGTTTTGATATTAGAGATTGAGATTCTGTATAGAAAGGGTAGGAAAGAAAAAGCAAGAACTTGAGAAACATTATTTCAATG ATGTTGTTGCCACACTACCGTCGTTGGATTAGCTGTGGGATCCGATTCAATTATGGAGTGTTCAAATTAGCTTTTGAGGCAAAATTTAGCCAAAATTACAACACTCCACCATTCGGGAGGGTGGTCATTTGGTTTGCCATGGATTCTAGCACGAGTGGAGACAGTTATCACACACAGGCCAAATGGAGAAAAGTGGCATATGGAGGTATGCAACCTGGGTTTGATGACAACCACACTGACGAGTCTTTTCTTGAAGATATTGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATATCCGAATATCTGTGCATCGTCACTCTTGTTGGCTTGGTTTGGACATACACACTTAGATCGACTCTTGATGAGAATTCCCTCTTATTTCTTGACATTGGCCTTCTTGGTTCAGGATTTCTAATTCTTCTTTTCACTGAAGGCTCACTCTCATTGAGCCTTCTCTTGCACTATTTTCTTAATATATCCTATTTCACAACGGGGTTGTATGTCTTAGCTCCCATCTACCAAACTCTGACTAGATCCATTAGCTCAGATTCCATTTGGGCATTGGCTGTTTCACTTATTATCCTTCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGGGCTCCTGGGGATCTTAAGAATCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATCGTGGCCTCTGTTCTTATCGCTTCACGTCTGCCATCTCGACTACATGTGTTCGGCATTATGTTGTTCTCATTGCAAGTTTTCCTTTTTGCTCCACTTGTTATTTACTCTATTAAGAAGTATTCTCTTCATCTGCATCTCTTATTTTCTTTCTGTTTAATAACAGTTACCTTAGTGTATGTTTATTTCTTACACCAGTTATTTTTCATACTTTTGGCGAGTCTATTGATTTTTGTAACCGTAGTTTGTCCTTATTGGCTCATACGAATCCAGGAATTTAAGTTTGAGATCAATGGTCCCTGGGACGAGGCCAAGCTTTGTTTTGATATTAGAGATTGA MLLPHYRRWISCGIRFNYGVFKLAFEAKFSQNYNTPPFGRVVIWFAMDSSTSGDSYHTQAKWRKVAYGGMQPGFDDNHTDESFLEDIVMNANVVKRDILKVMLDSVSISEYLCIVTLVGLVWTYTLRSTLDENSLLFLDIGLLGSGFLILLFTEGSLSLSLLLHYFLNISYFTTGLYVLAPIYQTLTRSISSDSIWALAVSLIILHLFLHDYSGSTVRAPGDLKNPSLTSCISLNASIVASVLIASRLPSRLHVFGIMLFSLQVFLFAPLVIYSIKKYSLHLHLLFSFCLITVTLVYVYFLHQLFFILLASLLIFVTVVCPYWLIRIQEFKFEINGPWDEAKLCFDIRD
BLAST of ClCG01G009960 vs. Swiss-Prot
Match: PIGC_DICDI (Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.6e-47 Identity = 103/296 (34.80%), Postives = 177/296 (59.80%), Query Frame = 1
BLAST of ClCG01G009960 vs. Swiss-Prot
Match: PIGC_MOUSE (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.6e-31 Identity = 95/301 (31.56%), Postives = 154/301 (51.16%), Query Frame = 1
BLAST of ClCG01G009960 vs. Swiss-Prot
Match: PIGC_BOVIN (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Bos taurus GN=PIGC PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.8e-31 Identity = 94/297 (31.65%), Postives = 153/297 (51.52%), Query Frame = 1
BLAST of ClCG01G009960 vs. Swiss-Prot
Match: PIGC_HUMAN (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.8e-31 Identity = 92/297 (30.98%), Postives = 155/297 (52.19%), Query Frame = 1
BLAST of ClCG01G009960 vs. Swiss-Prot
Match: PIGC_RAT (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.8e-31 Identity = 93/298 (31.21%), Postives = 152/298 (51.01%), Query Frame = 1
BLAST of ClCG01G009960 vs. TrEMBL
Match: A0A0A0LTI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196250 PE=4 SV=1) HSP 1 Score: 582.0 bits (1499), Expect = 4.8e-163 Identity = 291/303 (96.04%), Postives = 297/303 (98.02%), Query Frame = 1
BLAST of ClCG01G009960 vs. TrEMBL
Match: A0A061EVD3_THECC (Phosphatidylinositolglycan synthase family protein isoform 2 OS=Theobroma cacao GN=TCM_021016 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 5.7e-140 Identity = 248/313 (79.23%), Postives = 279/313 (89.14%), Query Frame = 1
BLAST of ClCG01G009960 vs. TrEMBL
Match: A0A061EMI1_THECC (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative isoform 1 OS=Theobroma cacao GN=TCM_021016 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 3.7e-139 Identity = 246/303 (81.19%), Postives = 274/303 (90.43%), Query Frame = 1
BLAST of ClCG01G009960 vs. TrEMBL
Match: W9QRM8_9ROSA (Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Morus notabilis GN=L484_020865 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 1.7e-131 Identity = 237/303 (78.22%), Postives = 261/303 (86.14%), Query Frame = 1
BLAST of ClCG01G009960 vs. TrEMBL
Match: I1LPA0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G019600 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 4.8e-131 Identity = 239/303 (78.88%), Postives = 264/303 (87.13%), Query Frame = 1
BLAST of ClCG01G009960 vs. TAIR10
Match: AT2G34980.1 (AT2G34980.1 phosphatidylinositolglycan synthase family protein) HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-128 Identity = 228/304 (75.00%), Postives = 262/304 (86.18%), Query Frame = 1
BLAST of ClCG01G009960 vs. NCBI nr
Match: gi|659118156|ref|XP_008458975.1| (PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C isoform X1 [Cucumis melo]) HSP 1 Score: 594.7 bits (1532), Expect = 1.0e-166 Identity = 298/308 (96.75%), Postives = 302/308 (98.05%), Query Frame = 1
BLAST of ClCG01G009960 vs. NCBI nr
Match: gi|659118158|ref|XP_008458976.1| (PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C isoform X2 [Cucumis melo]) HSP 1 Score: 583.6 bits (1503), Expect = 2.3e-163 Identity = 293/303 (96.70%), Postives = 297/303 (98.02%), Query Frame = 1
BLAST of ClCG01G009960 vs. NCBI nr
Match: gi|449465417|ref|XP_004150424.1| (PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Cucumis sativus]) HSP 1 Score: 582.0 bits (1499), Expect = 6.8e-163 Identity = 291/303 (96.04%), Postives = 297/303 (98.02%), Query Frame = 1
BLAST of ClCG01G009960 vs. NCBI nr
Match: gi|590660007|ref|XP_007035283.1| (Phosphatidylinositolglycan synthase family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 505.4 bits (1300), Expect = 8.1e-140 Identity = 248/313 (79.23%), Postives = 279/313 (89.14%), Query Frame = 1
BLAST of ClCG01G009960 vs. NCBI nr
Match: gi|590660004|ref|XP_007035282.1| (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 502.7 bits (1293), Expect = 5.3e-139 Identity = 246/303 (81.19%), Postives = 274/303 (90.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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