CmaCh18G003340 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGGAGTGGAAGCAAGGAGATTGGAGTGGTGGATGTGTTAAGAGGATGCCATTGCAATGTAAGAGGTTGAACAATGGTAGTGTTCAAGAAGATGGGTTTCAGAAAGTTGAAAGGGTTAAAGTGCCTTACTTTGCTGAATGGTCTACTCTTTCTTATTCAGAATTGTTCGTGTAACGCTATTGCTTATGAAGATGGTCTTCGTTGTATGCAATGGAGAAGGGAGGAGTTAATTGATATGCAAAAGTTTGAGATTGGTGGAGCTGATCTTTACATACGAATGGCTTATGGAGAATTAGATCATCCAAGTATGTACTCTCCCTAAACTCTCTCTCTAGTCGGAACATTTTTTTTTTATAAAAATGTGAAAACTCTCTCTAGTATATGCATTTTAAAATTGTGAGGTTGATGACTAAACGTAACAAGTCGAAACGGATAATATTTGCAAGTGGTGGGCTTGAGAGGTTAAAAATGGTATCAAAGCTAGACACTAGGCAATATATTAGCGAGGACGCTGGCCCCCAATGGGGGTAGATTGTTAGAGGGGAACGAAACATTCCTTAGAAGGGTGTGAAAACCTTTTCTTAGTTTATGCATTTTAAAACCGTGAGATTGACGGCGATATGTAATGGGCCAAAGTGGGAAATATCTGTTAATGGTGGGCTTAGGCTGTTACAAATAGTATCAGAGCCCGACACTGAACAGTGTGCCTGTGCCAGCGAGGAGGTTGGCCCCTGGGTGGAGTGGATTGTTAGATCCCACATCGATTGAAGAGAAAAATGAAACATTTCTTATAAGTGGAAACCTCTCTCTAGTATATGTGTTTTAAAATTGTGAGGTTGACGACGATACGTAACGAGCCAAAGTGATCCCAAATCGGTTGGAGGAGGGAACAAAATATTTCTTATATGGATATAGAAACCTCTCCCTAGTATACACGTTTTTAAATCGTGAGGCTAACGACTATACTTAACTGAGTCAAAGTGAACAATATCTACCAGCGGTAAACTTAAGCAGTTAGAAATGATATCAAAGTTAGACACCGATCGGTGTGCTAGTGAGGACGCTAGCCCCCAAGGAGGTGGATTGTTAGATCTCATATACATTTCTTATAAGGGTGTGGAATCCTCTCCCCAGTATACATGTTTAAAACCACGAGGCTGACAACGATACATAAAAGTCCAAAACTAACAATATCTATTAGTGGTGAGCTTGAACTATTACGATATTGTTCCATCTAAAATTTTGTATTATTTCCTTCATTCACAGATAATGTAAATAACAAAAAAGGAACTATTACAGCAATCGTGCTACCGACGACCTTTATCATCTTCATAATTGCCGTATTTGTTTGGTGTAAATGGAAGACTTACAACCAAGGTAATCCAAAAGATTACATTACTCCTATATTTGTCAATCCAAACATAACTCACAACTCACATTAAATTATTTGAGGCCAACAAAAGGGTTCGAAACTTACAAGGGAGGATGACATGATTGGGAATGATATCAAACTTGAAGAGGTACCCTTTTATGATATTGAGAAGCTCGCAATTGCTACCAACAATTTTGCTCTTAGCAACAAGCTTGGGCAAGGTGGCTTTGGTCCTGTCTATAAGGTAGGTAGTTTTTATATCCGTTCATGAAAATATGTCTTATTTGTAAGTTAATAAGCTTGACTTAGTAAAAGAACTTGTTAACCTAAATCGATTTTAGGATAATTTAGTAGTCACTAATTTAAAAGTTTACGAGACGAATTAGGAAGATTCAGATATTGATTTGAAAGTTTAGGAGATTTTGATTTGAAAGTTTAGGAGATTGATCATGCAAACTCCACTCTAAACAGAGGTATGCTATTTACCCAACTAAAAAAAGAATTAATAAACATAAGTGCTTAAAGTTCTTCCCTCAAGTTATTCTTCCACTTCCATTACTTTCTACCTATTTTGATCTCGTGGGCAATTTTCGACAGGAAAAATTCTTAAATGGACAAGAAATAGCTGTAAAGAGGCTATCGAGAGCCTCCAACCAAGGGTACGAAGAATTTATGAATGAAGTGAAGGTGATTTCTAAGCTACAACATAGAAATCTTGTACGCCTCTTTGGTTGTTGCATCGATGGAGAAGAAAAGATGTTGATTTATGAGTACATGCCCCACCTAGCTTGGATGCGTTAATTTTTGGTAAGATATTTGTGAAAATTTGACGAAGTTCTTGTTGTGTTCGGAGTTGATTCACTAATCAAAACAAAATTCCATTCATTTATAGGCTCTCGAAAACAAGAACTTTTGGATTGGTGGAAGAGATTCAATATTATCGACGGAATTGCTTGAGGTCTCCTTTATCTTCATAG ATGAGGAGGAGTGGAAGCAAGGAGATTGGAGTGGTGGATGTGTTAAGAGGATGCCATTGCAATAATTGTTCGTGTAACGCTATTGCTTATGAAGATGGTCTTCGTTGTATGCAATGGAGAAGGGAGGAGTTAATTGATATGCAAAAGTTTGAGATTGGTGGAGCTGATCTTTACATACGAATGGCTTATGGAGAATTAGATCATCCAAATAATGTAAATAACAAAAAAGGAACTATTACAGCAATCGTGCTACCGACGACCTTTATCATCTTCATAATTGCCGTATTTGTTTGGTGTAAATGGAAGACTTACAACCAAGGCCAACAAAAGGGTTCGAAACTTACAAGGGAGGATGACATGATTGGGAATGATATCAAACTTGAAGAGGTACCCTTTTATGATATTGAGAAGCTCGCAATTGCTACCAACAATTTTGCTCTTAGCAACAAGCTTGGGCAAGGTGGCTTTGGTCCTGTCTATAAGGAAAAATTCTTAAATGGACAAGAAATAGCTGTAAAGAGGCTATCGAGAGCCTCCAACCAAGGGTACGAAGAATTTATGAATGAAGTGAAGCTTGGATGCGTTAATTTTTGGCTCTCGAAAACAAGAACTTTTGGATTGGTGGAAGAGATTCAATATTATCGACGGAATTGCTTGAGGTCTCCTTTATCTTCATAG ATGAGGAGGAGTGGAAGCAAGGAGATTGGAGTGGTGGATGTGTTAAGAGGATGCCATTGCAATAATTGTTCGTGTAACGCTATTGCTTATGAAGATGGTCTTCGTTGTATGCAATGGAGAAGGGAGGAGTTAATTGATATGCAAAAGTTTGAGATTGGTGGAGCTGATCTTTACATACGAATGGCTTATGGAGAATTAGATCATCCAAATAATGTAAATAACAAAAAAGGAACTATTACAGCAATCGTGCTACCGACGACCTTTATCATCTTCATAATTGCCGTATTTGTTTGGTGTAAATGGAAGACTTACAACCAAGGCCAACAAAAGGGTTCGAAACTTACAAGGGAGGATGACATGATTGGGAATGATATCAAACTTGAAGAGGTACCCTTTTATGATATTGAGAAGCTCGCAATTGCTACCAACAATTTTGCTCTTAGCAACAAGCTTGGGCAAGGTGGCTTTGGTCCTGTCTATAAGGAAAAATTCTTAAATGGACAAGAAATAGCTGTAAAGAGGCTATCGAGAGCCTCCAACCAAGGGTACGAAGAATTTATGAATGAAGTGAAGCTTGGATGCGTTAATTTTTGGCTCTCGAAAACAAGAACTTTTGGATTGGTGGAAGAGATTCAATATTATCGACGGAATTGCTTGAGGTCTCCTTTATCTTCATAG MRRSGSKEIGVVDVLRGCHCNNCSCNAIAYEDGLRCMQWRREELIDMQKFEIGGADLYIRMAYGELDHPNNVNNKKGTITAIVLPTTFIIFIIAVFVWCKWKTYNQGQQKGSKLTREDDMIGNDIKLEEVPFYDIEKLAIATNNFALSNKLGQGGFGPVYKEKFLNGQEIAVKRLSRASNQGYEEFMNEVKLGCVNFWLSKTRTFGLVEEIQYYRRNCLRSPLSS
BLAST of CmaCh18G003340 vs. Swiss-Prot
Match: Y1142_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana GN=At1g61420 PE=3 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 3.3e-33 Identity = 81/189 (42.86%), Postives = 117/189 (61.90%), Query Frame = 1
BLAST of CmaCh18G003340 vs. Swiss-Prot
Match: Y1133_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=2 SV=3) HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33 Identity = 79/182 (43.41%), Postives = 107/182 (58.79%), Query Frame = 1
BLAST of CmaCh18G003340 vs. Swiss-Prot
Match: Y1137_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31 Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 1
BLAST of CmaCh18G003340 vs. Swiss-Prot
Match: Y1130_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 8.9e-31 Identity = 83/190 (43.68%), Postives = 108/190 (56.84%), Query Frame = 1
BLAST of CmaCh18G003340 vs. Swiss-Prot
Match: Y1155_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabidopsis thaliana GN=At1g61550 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30 Identity = 77/178 (43.26%), Postives = 111/178 (62.36%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TrEMBL
Match: A0A0A0LS76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G071270 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 6.0e-50 Identity = 106/174 (60.92%), Postives = 135/174 (77.59%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TrEMBL
Match: A0A0A0LUF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G071280 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.8e-39 Identity = 95/186 (51.08%), Postives = 124/186 (66.67%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TrEMBL
Match: U7DWR5_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0608s00200g PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.3e-38 Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TrEMBL
Match: B9H1U5_POPTR (Serine/threonine-protein kinase OS=Populus trichocarpa GN=POPTR_0004s02660g PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 8.4e-36 Identity = 88/180 (48.89%), Postives = 116/180 (64.44%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TrEMBL
Match: A0A0A0LXA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G071790 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35 Identity = 84/153 (54.90%), Postives = 104/153 (67.97%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TAIR10
Match: AT1G61420.1 (AT1G61420.1 S-locus lectin protein kinase family protein) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34 Identity = 81/189 (42.86%), Postives = 117/189 (61.90%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TAIR10
Match: AT1G11330.2 (AT1G11330.2 S-locus lectin protein kinase family protein) HSP 1 Score: 141.7 bits (356), Expect = 5.4e-34 Identity = 79/182 (43.41%), Postives = 107/182 (58.79%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TAIR10
Match: AT1G61370.1 (AT1G61370.1 S-locus lectin protein kinase family protein) HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32 Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TAIR10
Match: AT1G11300.1 (AT1G11300.1 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding) HSP 1 Score: 135.2 bits (339), Expect = 5.0e-32 Identity = 83/190 (43.68%), Postives = 108/190 (56.84%), Query Frame = 1
BLAST of CmaCh18G003340 vs. TAIR10
Match: AT1G61480.1 (AT1G61480.1 S-locus lectin protein kinase family protein) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31 Identity = 78/182 (42.86%), Postives = 113/182 (62.09%), Query Frame = 1
BLAST of CmaCh18G003340 vs. NCBI nr
Match: gi|659068839|ref|XP_008446571.1| (PREDICTED: uncharacterized protein LOC103489262 [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 5.9e-51 Identity = 107/173 (61.85%), Postives = 136/173 (78.61%), Query Frame = 1
BLAST of CmaCh18G003340 vs. NCBI nr
Match: gi|778658595|ref|XP_011652943.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 8.6e-50 Identity = 106/174 (60.92%), Postives = 135/174 (77.59%), Query Frame = 1
BLAST of CmaCh18G003340 vs. NCBI nr
Match: gi|700209517|gb|KGN64613.1| (hypothetical protein Csa_1G071270 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 8.6e-50 Identity = 106/174 (60.92%), Postives = 135/174 (77.59%), Query Frame = 1
BLAST of CmaCh18G003340 vs. NCBI nr
Match: gi|659067915|ref|XP_008441894.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X3 [Cucumis melo]) HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48 Identity = 105/178 (58.99%), Postives = 130/178 (73.03%), Query Frame = 1
BLAST of CmaCh18G003340 vs. NCBI nr
Match: gi|659067917|ref|XP_008441902.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 isoform X4 [Cucumis melo]) HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48 Identity = 105/178 (58.99%), Postives = 130/178 (73.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |