CmaCh17G012460 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTAACTTTTTGGCGAGGGAAGTTGTTTTTTGTTTTGCACGTTTTCTTCTTCCACTGTTGCTGGTTTTGGGTTTGTTGTTTTTAACACTTCGTTGGCAGGGTTTGTATTAGAAATAAAATTGACCAGGATTTATGTGTTTGTTTGATTTGAATTTTCAAATTTAGCACTAGATATGTTTTTTTAATCGACATGCCAATAGCTGTTGAATACATTTTTATTTTGTAGTTGCCTTTTCCTTTCAAAATTGAGATCTTGTATTTATAACCATCAAATTTCTTTTACGCTGCATAAATGCAGGTCAAGGACTTGTACAGACCTTGGCGTCTTGGAGAAGTTGCTAATAGTTTTAGTCAAGGGTGTAGTCCACCAATTACTACTACAGTTACAGTTCTTTGCTTTCAATTAGTAGACCTGTGATTTCGCTTTAATAAAGCCAGAGTAATCATTCTGTAGATTTGAATTGGTAGCACAAATAGAGACTGAGAAGCCTCCTGTAGGAAATATAAAAAGAGCTGCTTCTCTTGGTGAGTAACCATGCAATTGCTTGATATATTTCCGGGTAATATATTTATATGTACGTTGTATATTGCATGTATGGCTACTGTCTTCATCAACTTTCATTTATCTTAGGTCCTCTCTTAATTTGGTTCACATTTTTTGTGTGATATGCAATGGTCAATTTAATGTTCGCTTTGTGTGCACTTTGATAACATGAAATGGATATCTTGATTTTTATTTTCTTTGTGTTACTCTCCTTTGTTAAATTTAGGACACTTTTTTTTTTTGTTTATGTATTTACAATTTACGTGTTCTTGGTATGATGTATCTTTGTTTTGATGTTAGAATTCGATGATTTATTAGCTTTGTGAGTCCTCTTTTTCTCCTTAAAGACCCATAAAACAAACGACTTTTCTTGCTGTTTCTGAATTGTTTTTAGCTTACTGTAAGTATTGTGCTATTGTTGTCAATAGAAGCATTCTGATCTATTAAATATGCTTAGTGATTTACCTAGTGCTCAAGATGGCTGGTGTGAAACGAAGAATTCATAATGATTCAGATATCCTTGCTTTGCATAAAGAATTGGATGAAGTCTCCTGCCCTATCTGCATGGACCACCCACATAATGCTGTTCTTCTACTTTGCAGCTCTCACCACAAGGGTTGCAAACCTTATATATGTGACACAAGCCATAGGCATTCAAATTGCTTTGACCAATTCAAAAAATTAAGAGAAGAAACTAGGAAGAGTCCACGCTTAACAAGTCCTTTACCTATAAATCCATATAGCTTTAGTAGTCCTACAAACAACCTGGGTCTGAGCATTGATTTGAATGAAGTTGATGATAATCAAAATATAAATGAAAGGAACACTGTTGCATCTGCTGGTTTACCTGTTGTAGTTTTAGGGGATAATGGAACTGAAAATTCTAATAGAACTTTAGACTCAAATGAGGCTGGAGATCTGGATACTGCTGGTTCTGGGTCTAATACTGAAAGGGATGAGCAGGAAGGTTTGGGTGCTGGGAACTCATCCGAGTACTCAGATTTGAAGTGCCCCATGTGCCGAGGAGCTGTGCTAGGCTGGGAAGTTATAGAAGAAGCAAGAGAATATCTTAATCTAAAGAAACGAAGCTGCTCCCGTGAAACTTGCTCATTCTCTGGCAACTACCAGGAACTACGCAGGCATGCTAGAAGAGTTCACCCGACGACCCGGCCTTCAGTCATAGACCCATCTAGAGAACGGGCATGGAGACGCTTGGAGCGACAGAGAGAAGTTGGTGATGTTGTTAGTGCCATCCGCTCAGCCATGCCTGGTGCCCTTGTGGTTGGAGACTATGTAATTGAAAATGGAGATGGTGGTATGGTGGCAGCTGAAAGAGACAGTGGCACAGGTGATGTCAATGGGCCATTGCTGACTAGTTTCTTTCTGTTTCATATGTTTGGATCGGTTGATGGTGCTCGAGAGCCAAGGCCACGTTCAAGGTCTTGGGTGAGGCATCGACGCTCTGGAGGAGGAACACCCGTACCAGAGCGCCGGTTCCTTTGGGGTGAAAACCTTTTGGGATTACAAGAAGATGCAGATGAGGATTTCCGCATATACATCGGAATGGGCGATGATGCATCACCACCTACGAGAAGGAGACGCGTAACGAGGCCTGAATCTGATGCAGATCAACCATGAGAGAATTGATCTTCTGTGGTAAACATCTATATGCCCTTGAGTTTGAGGGAGATTTGTTCCAAAATGAAATGGAGTGTGTTTGGTTTCGTGTCTCGGTCTCAATGCCTAAAAACAGGTTAAATTGTTAAACAACCACAGGCGGGCATCCCAGCAATGAACCATCCATCCATCCCATCTTGTTGGGTCGTCTGGAACATCAAGAAATTTGTGCTTCCAAAGTCTCCAAGGGAGGCGTTTAGTTGGCCATCATCTTGATGCAAAATACACCGCCCAGCAATTGGCTCTCAACAAGAAGCAAGAAGCAGCCGGATAAGAGTATTAAGCGTCATCTTTTGGAAGTTCTCAGATGGAATCACAATCCTTTATTTTATTCGAATTTAAGTTCTAAATGATTGCATAATGTCCTTTTCCAATCTTTGTATATAAATGGGATAATGATTTCATTTGATCAATCTAGTGTGATTGTGGTTTTATTTATATATTATCCTATATTTTATTGAA ATGCTTAACTTTTTGGCGAGGGAAGTTGTTTTTTGTTTTGCACGTTTTCTTCTTCCACTGTTGCTGGTTTTGGGTTTGTTGTTTTTAACACTTCGTTGGCAGGGTTTTTGCCTTTTCCTTTCAAAATTGAGATCTTGTATTTATAACCATCAAATTTCTTTTACGCTGCATAAATGCAGGTCAAGGACTTGTACAGACCTTGGCGTCTTGGAGAAGTTGCTAATAGTTTTAGTCAAGGGTGTAGTCCACCAATTACTACTACAATTTGAATTGGTAGCACAAATAGAGACTGAGAAGCCTCCTGTAGGAAATATAAAAAGAGCTGCTTCTCTTGTGATTTACCTAGTGCTCAAGATGGCTGGTGTGAAACGAAGAATTCATAATGATTCAGATATCCTTGCTTTGCATAAAGAATTGGATGAAGTCTCCTGCCCTATCTGCATGGACCACCCACATAATGCTGTTCTTCTACTTTGCAGCTCTCACCACAAGGGTTGCAAACCTTATATATGTGACACAAGCCATAGGCATTCAAATTGCTTTGACCAATTCAAAAAATTAAGAGAAGAAACTAGGAAGAGTCCACGCTTAACAAGTCCTTTACCTATAAATCCATATAGCTTTAGTAGTCCTACAAACAACCTGGGTCTGAGCATTGATTTGAATGAAGTTGATGATAATCAAAATATAAATGAAAGGAACACTGTTGCATCTGCTGGTTTACCTGTTGTAGTTTTAGGGGATAATGGAACTGAAAATTCTAATAGAACTTTAGACTCAAATGAGGCTGGAGATCTGGATACTGCTGGTTCTGGGTCTAATACTGAAAGGGATGAGCAGGAAGGTTTGGGTGCTGGGAACTCATCCGAGTACTCAGATTTGAAGTGCCCCATGTGCCGAGGAGCTGTGCTAGGCTGGGAAGTTATAGAAGAAGCAAGAGAATATCTTAATCTAAAGAAACGAAGCTGCTCCCGTGAAACTTGCTCATTCTCTGGCAACTACCAGGAACTACGCAGGCATGCTAGAAGAGTTCACCCGACGACCCGGCCTTCAGTCATAGACCCATCTAGAGAACGGGCATGGAGACGCTTGGAGCGACAGAGAGAAGTTGGTGATGTTGTTAGTGCCATCCGCTCAGCCATGCCTGGTGCCCTTGTGGTTGGAGACTATGTAATTGAAAATGGAGATGGTGGTATGGTGGCAGCTGAAAGAGACAGTGGCACAGGTGATGTCAATGGGCCATTGCTGACTAGTTTCTTTCTGTTTCATATGTTTGGATCGGTTGATGGTGCTCGAGAGCCAAGGCCACGTTCAAGGTCTTGGGTGAGGCATCGACGCTCTGGAGGAGGAACACCCGTACCAGAGCGCCGGTTCCTTTGGGGTGAAAACCTTTTGGGATTACAAGAAGATGCAGATGAGGATTTCCGCATATACATCGGAATGGGCGATGATGCATCACCACCTACGAGAAGGAGACGCGTAACGAGGCCTGAATCTGATGCAGATCAACCATGAGAGAATTGATCTTCTGTGGCGGGCATCCCAGCAATGAACCATCCATCCATCCCATCTTGTTGGGTCGTCTGGAACATCAAGAAATTTGTGCTTCCAAAGTCTCCAAGGGAGGCGTTTAGTTGGCCATCATCTTGATGCAAAATACACCGCCCAGCAATTGGCTCTCAACAAGAAGCAAGAAGCAGCCGGATAAGAGTATTAAGCGTCATCTTTTGGAAGTTCTCAGATGGAATCACAATCCTTTATTTTATTCGAATTTAAGTTCTAAATGATTGCATAATGTCCTTTTCCAATCTTTGTATATAAATGGGATAATGATTTCATTTGATCAATCTAGTGTGATTGTGGTTTTATTTATATATTATCCTATATTTTATTGAA ATGCTTAACTTTTTGGCGAGGGAAGTTGTTTTTTGTTTTGCACGTTTTCTTCTTCCACTGTTGCTGGTTTTGGGTTTGTTGTTTTTAACACTTCGTTGGCAGGGTTTTTGCCTTTTCCTTTCAAAATTGAGATCTTGTATTTATAACCATCAAATTTCTTTTACGCTGCATAAATGCAGGTCAAGGACTTGTACAGACCTTGGCGTCTTGGAGAAGTTGCTAATAGTTTTAGTCAAGGGTGTAGTCCACCAATTACTACTACAATTTGAATTGGTAGCACAAATAGAGACTGAGAAGCCTCCTGTAGGAAATATAAAAAGAGCTGCTTCTCTTGTGATTTACCTAGTGCTCAAGATGGCTGGTGTGAAACGAAGAATTCATAATGATTCAGATATCCTTGCTTTGCATAAAGAATTGGATGAAGTCTCCTGCCCTATCTGCATGGACCACCCACATAATGCTGTTCTTCTACTTTGCAGCTCTCACCACAAGGGTTGCAAACCTTATATATGTGACACAAGCCATAGGCATTCAAATTGCTTTGACCAATTCAAAAAATTAAGAGAAGAAACTAGGAAGAGTCCACGCTTAACAAGTCCTTTACCTATAAATCCATATAGCTTTAGTAGTCCTACAAACAACCTGGGTCTGAGCATTGATTTGAATGAAGTTGATGATAATCAAAATATAAATGAAAGGAACACTGTTGCATCTGCTGGTTTACCTGTTGTAGTTTTAGGGGATAATGGAACTGAAAATTCTAATAGAACTTTAGACTCAAATGAGGCTGGAGATCTGGATACTGCTGGTTCTGGGTCTAATACTGAAAGGGATGAGCAGGAAGGTTTGGGTGCTGGGAACTCATCCGAGTACTCAGATTTGAAGTGCCCCATGTGCCGAGGAGCTGTGCTAGGCTGGGAAGTTATAGAAGAAGCAAGAGAATATCTTAATCTAAAGAAACGAAGCTGCTCCCGTGAAACTTGCTCATTCTCTGGCAACTACCAGGAACTACGCAGGCATGCTAGAAGAGTTCACCCGACGACCCGGCCTTCAGTCATAGACCCATCTAGAGAACGGGCATGGAGACGCTTGGAGCGACAGAGAGAAGTTGGTGATGTTGTTAGTGCCATCCGCTCAGCCATGCCTGGTGCCCTTGTGGTTGGAGACTATGTAATTGAAAATGGAGATGGTGGTATGGTGGCAGCTGAAAGAGACAGTGGCACAGGTGATGTCAATGGGCCATTGCTGACTAGTTTCTTTCTGTTTCATATGTTTGGATCGGTTGATGGTGCTCGAGAGCCAAGGCCACGTTCAAGGTCTTGGGTGAGGCATCGACGCTCTGGAGGAGGAACACCCGTACCAGAGCGCCGGTTCCTTTGGGGTGAAAACCTTTTGGGATTACAAGAAGATGCAGATGAGGATTTCCGCATATACATCGGAATGGGCGATGATGCATCACCACCTACGAGAAGGAGACGCGTAACGAGGCCTGAATCTGATGCAGATCAACCATGA MLNFLAREVVFCFARFLLPLLLVLGLLFLTLRWQGFCLFLSKLRSCIYNHQISFTLHKCRSRTCTDLGVLEKLLIVLVKGVVHQLLLQFELVAQIETEKPPVGNIKRAASLVIYLVLKMAGVKRRIHNDSDILALHKELDEVSCPICMDHPHNAVLLLCSSHHKGCKPYICDTSHRHSNCFDQFKKLREETRKSPRLTSPLPINPYSFSSPTNNLGLSIDLNEVDDNQNINERNTVASAGLPVVVLGDNGTENSNRTLDSNEAGDLDTAGSGSNTERDEQEGLGAGNSSEYSDLKCPMCRGAVLGWEVIEEAREYLNLKKRSCSRETCSFSGNYQELRRHARRVHPTTRPSVIDPSRERAWRRLERQREVGDVVSAIRSAMPGALVVGDYVIENGDGGMVAAERDSGTGDVNGPLLTSFFLFHMFGSVDGAREPRPRSRSWVRHRRSGGGTPVPERRFLWGENLLGLQEDADEDFRIYIGMGDDASPPTRRRRVTRPESDADQP
BLAST of CmaCh17G012460 vs. TrEMBL
Match: A0A0A0K9V2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G337080 PE=4 SV=1) HSP 1 Score: 729.6 bits (1882), Expect = 2.7e-207 Identity = 362/387 (93.54%), Postives = 374/387 (96.64%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TrEMBL
Match: A0A061DMD3_THECC (B3 domain-containing transcription factor VAL3, putative isoform 1 OS=Theobroma cacao GN=TCM_003003 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 2.1e-127 Identity = 244/387 (63.05%), Postives = 284/387 (73.39%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TrEMBL
Match: A0A067FRS5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014932mg PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 2.3e-126 Identity = 248/403 (61.54%), Postives = 297/403 (73.70%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TrEMBL
Match: A0A067FEV6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014932mg PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.1e-125 Identity = 244/394 (61.93%), Postives = 292/394 (74.11%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TrEMBL
Match: V4TYP3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020351mg PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 2.0e-125 Identity = 246/403 (61.04%), Postives = 296/403 (73.45%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TAIR10
Match: AT3G24740.1 (AT3G24740.1 Protein of unknown function (DUF1644)) HSP 1 Score: 354.8 bits (909), Expect = 9.0e-98 Identity = 204/400 (51.00%), Postives = 249/400 (62.25%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TAIR10
Match: AT3G25910.1 (AT3G25910.1 Protein of unknown function (DUF1644)) HSP 1 Score: 204.1 bits (518), Expect = 2.0e-52 Identity = 134/375 (35.73%), Postives = 186/375 (49.60%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TAIR10
Match: AT1G68140.1 (AT1G68140.1 Protein of unknown function (DUF1644)) HSP 1 Score: 135.2 bits (339), Expect = 1.1e-31 Identity = 66/148 (44.59%), Postives = 94/148 (63.51%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TAIR10
Match: AT4G31410.1 (AT4G31410.1 Protein of unknown function (DUF1644)) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-28 Identity = 68/153 (44.44%), Postives = 87/153 (56.86%), Query Frame = 1
BLAST of CmaCh17G012460 vs. TAIR10
Match: AT4G08460.1 (AT4G08460.1 Protein of unknown function (DUF1644)) HSP 1 Score: 122.9 bits (307), Expect = 5.8e-28 Identity = 54/110 (49.09%), Postives = 76/110 (69.09%), Query Frame = 1
BLAST of CmaCh17G012460 vs. NCBI nr
Match: gi|778726874|ref|XP_011659176.1| (PREDICTED: uncharacterized protein LOC101208460 isoform X1 [Cucumis sativus]) HSP 1 Score: 736.9 bits (1901), Expect = 2.4e-209 Identity = 366/392 (93.37%), Postives = 378/392 (96.43%), Query Frame = 1
BLAST of CmaCh17G012460 vs. NCBI nr
Match: gi|449443778|ref|XP_004139654.1| (PREDICTED: uncharacterized protein LOC101208460 isoform X2 [Cucumis sativus]) HSP 1 Score: 731.5 bits (1887), Expect = 1.0e-207 Identity = 363/390 (93.08%), Postives = 376/390 (96.41%), Query Frame = 1
BLAST of CmaCh17G012460 vs. NCBI nr
Match: gi|659092886|ref|XP_008447269.1| (PREDICTED: uncharacterized protein LOC103489748 isoform X1 [Cucumis melo]) HSP 1 Score: 730.7 bits (1885), Expect = 1.7e-207 Identity = 364/392 (92.86%), Postives = 376/392 (95.92%), Query Frame = 1
BLAST of CmaCh17G012460 vs. NCBI nr
Match: gi|449443780|ref|XP_004139655.1| (PREDICTED: uncharacterized protein LOC101208460 isoform X3 [Cucumis sativus]) HSP 1 Score: 729.6 bits (1882), Expect = 3.8e-207 Identity = 362/387 (93.54%), Postives = 374/387 (96.64%), Query Frame = 1
BLAST of CmaCh17G012460 vs. NCBI nr
Match: gi|659092890|ref|XP_008447271.1| (PREDICTED: uncharacterized protein LOC103489748 isoform X2 [Cucumis melo]) HSP 1 Score: 725.3 bits (1871), Expect = 7.2e-206 Identity = 361/390 (92.56%), Postives = 374/390 (95.90%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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