Carg04898 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATGCGGCTAAGTCTGGCTATAAATATTCAAACCGATGCCCAGAGTCATTGTTTTCGATCATCTCACCATTCTCTGCGCTATATCTCAGCGAGTTCTTCACGCAATCTTTACCGTCGATCCAACTGCGGATGAGTTCCATCAAATTCTGCTTTTAGTAAACCCTAATCTTCCATGTTTTATAATCGAATTTTCCTTCTGCTATTGATGTTTTAATTTTAGTTTCCTGTTTTTGATTTCAATTATTTGTCATCCGGATTGGATGGGTTGCTGCTGCCCTTGTCTTTGATTCTGTGTTGTTTCTTGTTGAATTGTTTGATTCCTTTGGTAATTTGACTTTCTCTTTGTTGAGGCTATACTTGGTTTGATTCGGGTTAGGGTTTGTTTTGGAATTGGGGATCTGCTTATTTGGATGGATTTGGTCTTTTTTATTTTATTATTATTTTTTATTTGTAATTATTATCCATTTACGTTCAATTTTTAATCAGGGTGGAAATTAAACGGGTTTATGATCAGAATTTAGGCATCAGAATCTATATCGGCCAATTTTCCTTATACTGCCCGAAGTTCAGCCTTGTTTTGGTTTCACTTAGAATTTTGATAGTAAGGGTGACGCTTTAAACTTGCTTCTATTTTTATAGAACATCGTAATTATGTGGGGTTGGGTGGGTTTCTTGGAATTTATTCCCCAAATCTAATTGAATCGGATGTTTTTTTATTGATGGGAAAAGGGGGTTTAAGGGTTACCAGGAGGGATCATCAGATGGTTGATGTTATTGTGGTTGCCTCCTGTGCCTTTTTAAACTTGTACAGACAAAAGGGGATGTCGTTGCTTTTGCATCTCCGCTCCCTTTTTTCATATCAAAAAAGTTTGATGGATGGGGCATTGCCTTTGGAATCCGAAGAATGTGGGTTTGAATCTTCCTTAGGAGAGTGATTTTTTCGATCTTCACATATGCCTAATTTTTTGGTTCGGAAAGTTGTTTGTTGATTCTGCATTGTTATGGTTTCTTGTTTGTGTTGACACGTTTTTGGCTGGGTTGGAGGGTTGGTAGAAAGACAATTGGCTAGGATTTTTGTGTAAATATATTTGGATGTTTTATTTGAGTTTTCAATTGTGGAACCTGATATTTGTTTGAATGGGTGTTCTTATTATGGAAATACCAATAGTTGTTGAAATAGTTTTCTTTTTTGTAGTTGTTTTTTTTCCTTAGAAATTGGGACTTTGTATTTATAACCATCAAATTTCTTTTACGCGGTATAAATGCAGGTCAAGGACTTGTACAGACCTTGGCGTCTTGGAGAAGTTGCTAATAGTTTTAGTCAAGGGTGTATTCCACCAATTACTACTACAGTTACAGTTCTTTGCTTTCAGTTTGTAGATCTGTGATTTTGCTTTAATAAAGACAAGAGTAAGCATTCTGTAGATTTGAATTGGTAGCACAAATAGAGATTGAGAAGCCTCCTGTAGGAAATATATAAGAGCTGCTTCTCTTGGTGAGTAATCATGCAATTGCTTGATATATTTTCAGGTGATATGCTCATATGTTAATCGTATCTTGCATGTAAGGCTACTCTCCAGCATTTGCACAGATTACTTATCATTCATTTATTTGAGGCCGTCTTTAAATTTGGATCAAATTTTTTGTGTTTATGTTCAATTTATTGTTCACAATATGCACTTTGACAATAAGAAATGAAAAACTTCGACTTTGAAATGGAAAGCATTTGCATCAATGGTCATCCGCTCCTGCATGTTGCTAATAATAAGCATTTGCATCAATGGTCATCCGCTCCTGCATGTTGCTAATAATTTTTTGTGTCTACTTCTACAGGTCCTCATTTAAGTTTAGAGCACCTTTTCTTTTGTATGCATTTGTGATTTATGTGTTGGTGGTATGATGTATTTGATCTTTTTCTGTTATCTAATTGGTTGCTATCTTAGTAATAATTGTGAGAATACTTTGTTTCTATTTAGAAACCTTATAAACAAACACTTTCTTGTCAAATTTTTTTTAGCGGTTTTCGTATTGCTTTTATTTTACTATAAGCATTGTGTTATTGCTGTCGAAAAAGTGTTCTGATCAATTAAATATGCTTAGTGGTTTACCTAGCGTTCAAGATGGCTGGTGTGAAACGAAGAATTCATAATGATTCAGATATCCTTGCTATGCATAAAGAATTGGATGAAGTCTCCTGCCCTATCTGCATAGACCACCCACATAATGCTGTTCTTCTACTTTGCAGCTCTCACCACAAGGGTTGCAAACCTTATATATGTGACACAAGCCATAGACATTCAAATTGCTTTGACCAATTCAAAAAATTAAGAGAAGAAACTAGGAAGAGTCCACGCCTACCAAGTCCTTTACCTATGAATCCATATAGTTTTAGTAGTCCTCCTACGAACAACCTGGGTTTGGGCATTGATTTGAATGAAGTTGATGAAAACCAAAATATAAATGAAAGAAACACTGCTGCATCTCCTGGATTATCTGTTGTAGTTTTAGGGGATAATGGAACTGAAAATTCTAATAGAACTTTAGACACAACTGAGGGTGGAGATTTGGACTCTGCTGGTTCTGGGTTCCTAACTCAGAGGGCTGAGCAGGAAGGTCTGGATGCTGGGAACTCATCTGAGTACTCAAATTTGAAGTGCCCCATGTGCCGAGGAGCTGTGCTAGGCTGGGAAGTTATAGAAGAAGCAAGAGAATATCTTAATCTAAAGAAACGAAGTTGCTCCCGGGAGACTTGCTCATTCTCTGGTAACTATCAAGAACTGCGCAGGCATGCGAGAAGAGTTCATCCGACATCGCGGCCTTCTGTGACAGACCCATCTAGAGAACGGGCATGGCGACGCTTGGAGCGCCAGAGAGAAGTGGGTGATGTTGTCAGTGCTATTCGCTCAGCCATGCCTGGTGCCCTTGTGGTTGGCGACTATGTCATCGAAAATGGAGATGGTATGGTGGCAGGTGAAAGAGACAATGGCACCAGAGATGTCAATGGGCCATTGCTGACTAGTTTCTTTCTGTTTCATATGTTTGGATCGGTTGATGGTGGTGCTCGAGAGCCAAGACCACGCTCAAGGTCGTCTTGGGTGAGGCGTCGTCGCTCTGGAGGAGGAATGATCGTACCAGAGCGTCAATTTCTTTGGGGTGAGAACCTTTTGGGAATGCAAGAAGATGCAGATGAGGATTTCCGAATATACATCGGAATGGGCGATGATGCATCACCACCTACGAGAAGGCGACGTGTAACAAGGCCTGGATCTGATGCAGATCAACCATGA AATGCGGCTAAGTCTGGCTATAAATATTCAAACCGATGCCCAGAGTCATTGTTTTCGATCATCTCACCATTCTCTGCGCTATATCTCAGCGAGTTCTTCACGCAATCTTTACCGTCGATCCAACTGCGGATGAGTTCCATCAAATTCTGCTTTTAGTCAAGGACTTGTACAGACCTTGGCGTCTTGGAGAAGTTGCTAATAGTTTTAGTCAAGGGTTGGTTTACCTAGCGTTCAAGATGGCTGGTGTGAAACGAAGAATTCATAATGATTCAGATATCCTTGCTATGCATAAAGAATTGGATGAAGTCTCCTGCCCTATCTGCATAGACCACCCACATAATGCTGTTCTTCTACTTTGCAGCTCTCACCACAAGGGTTGCAAACCTTATATATGTGACACAAGCCATAGACATTCAAATTGCTTTGACCAATTCAAAAAATTAAGAGAAGAAACTAGGAAGAGTCCACGCCTACCAAGTCCTTTACCTATGAATCCATATAGTTTTAGTAGTCCTCCTACGAACAACCTGGGTTTGGGCATTGATTTGAATGAAGTTGATGAAAACCAAAATATAAATGAAAGAAACACTGCTGCATCTCCTGGATTATCTGTTGTAGTTTTAGGGGATAATGGAACTGAAAATTCTAATAGAACTTTAGACACAACTGAGGGTGGAGATTTGGACTCTGCTGGTTCTGGGTTCCTAACTCAGAGGGCTGAGCAGGAAGGTCTGGATGCTGGGAACTCATCTGAGTACTCAAATTTGAAGTGCCCCATGTGCCGAGGAGCTGTGCTAGGCTGGGAAGTTATAGAAGAAGCAAGAGAATATCTTAATCTAAAGAAACGAAGTTGCTCCCGGGAGACTTGCTCATTCTCTGGTAACTATCAAGAACTGCGCAGGCATGCGAGAAGAGTTCATCCGACATCGCGGCCTTCTGTGACAGACCCATCTAGAGAACGGGCATGGCGACGCTTGGAGCGCCAGAGAGAAGTGGGTGATGTTGTCAGTGCTATTCGCTCAGCCATGCCTGGTGCCCTTGTGGTTGGCGACTATGTCATCGAAAATGGAGATGGTATGGTGGCAGGTGAAAGAGACAATGGCACCAGAGATGTCAATGGGCCATTGCTGACTAGTTTCTTTCTGTTTCATATGTTTGGATCGGTTGATGGTGGTGCTCGAGAGCCAAGACCACGCTCAAGGTCGTCTTGGGTGAGGCGTCGTCGCTCTGGAGGAGGAATGATCGTACCAGAGCGTCAATTTCTTTGGGGTGAGAACCTTTTGGGAATGCAAGAAGATGCAGATGAGGATTTCCGAATATACATCGGAATGGGCGATGATGCATCACCACCTACGAGAAGGCGACGTGTAACAAGGCCTGGATCTGATGCAGATCAACCATGA ATGCCCAGAGTCATTGTTTTCGATCATCTCACCATTCTCTGCGCTATATCTCAGCGAGTTCTTCACGCAATCTTTACCGTCGATCCAACTGCGGATGAGTTCCATCAAATTCTGCTTTTAGTCAAGGACTTGTACAGACCTTGGCGTCTTGGAGAAGTTGCTAATAGTTTTAGTCAAGGGTTGGTTTACCTAGCGTTCAAGATGGCTGGTGTGAAACGAAGAATTCATAATGATTCAGATATCCTTGCTATGCATAAAGAATTGGATGAAGTCTCCTGCCCTATCTGCATAGACCACCCACATAATGCTGTTCTTCTACTTTGCAGCTCTCACCACAAGGGTTGCAAACCTTATATATGTGACACAAGCCATAGACATTCAAATTGCTTTGACCAATTCAAAAAATTAAGAGAAGAAACTAGGAAGAGTCCACGCCTACCAAGTCCTTTACCTATGAATCCATATAGTTTTAGTAGTCCTCCTACGAACAACCTGGGTTTGGGCATTGATTTGAATGAAGTTGATGAAAACCAAAATATAAATGAAAGAAACACTGCTGCATCTCCTGGATTATCTGTTGTAGTTTTAGGGGATAATGGAACTGAAAATTCTAATAGAACTTTAGACACAACTGAGGGTGGAGATTTGGACTCTGCTGGTTCTGGGTTCCTAACTCAGAGGGCTGAGCAGGAAGGTCTGGATGCTGGGAACTCATCTGAGTACTCAAATTTGAAGTGCCCCATGTGCCGAGGAGCTGTGCTAGGCTGGGAAGTTATAGAAGAAGCAAGAGAATATCTTAATCTAAAGAAACGAAGTTGCTCCCGGGAGACTTGCTCATTCTCTGGTAACTATCAAGAACTGCGCAGGCATGCGAGAAGAGTTCATCCGACATCGCGGCCTTCTGTGACAGACCCATCTAGAGAACGGGCATGGCGACGCTTGGAGCGCCAGAGAGAAGTGGGTGATGTTGTCAGTGCTATTCGCTCAGCCATGCCTGGTGCCCTTGTGGTTGGCGACTATGTCATCGAAAATGGAGATGGTATGGTGGCAGGTGAAAGAGACAATGGCACCAGAGATGTCAATGGGCCATTGCTGACTAGTTTCTTTCTGTTTCATATGTTTGGATCGGTTGATGGTGGTGCTCGAGAGCCAAGACCACGCTCAAGGTCGTCTTGGGTGAGGCGTCGTCGCTCTGGAGGAGGAATGATCGTACCAGAGCGTCAATTTCTTTGGGGTGAGAACCTTTTGGGAATGCAAGAAGATGCAGATGAGGATTTCCGAATATACATCGGAATGGGCGATGATGCATCACCACCTACGAGAAGGCGACGTGTAACAAGGCCTGGATCTGATGCAGATCAACCATGA MPRVIVFDHLTILCAISQRVLHAIFTVDPTADEFHQILLLVKDLYRPWRLGEVANSFSQGLVYLAFKMAGVKRRIHNDSDILAMHKELDEVSCPICIDHPHNAVLLLCSSHHKGCKPYICDTSHRHSNCFDQFKKLREETRKSPRLPSPLPMNPYSFSSPPTNNLGLGIDLNEVDENQNINERNTAASPGLSVVVLGDNGTENSNRTLDTTEGGDLDSAGSGFLTQRAEQEGLDAGNSSEYSNLKCPMCRGAVLGWEVIEEAREYLNLKKRSCSRETCSFSGNYQELRRHARRVHPTSRPSVTDPSRERAWRRLERQREVGDVVSAIRSAMPGALVVGDYVIENGDGMVAGERDNGTRDVNGPLLTSFFLFHMFGSVDGGAREPRPRSRSSWVRRRRSGGGMIVPERQFLWGENLLGMQEDADEDFRIYIGMGDDASPPTRRRRVTRPGSDADQP
BLAST of Carg04898 vs. NCBI nr
Match: XP_022960324.1 (uncharacterized protein LOC111461086 isoform X1 [Cucurbita moschata]) HSP 1 Score: 803.1 bits (2073), Expect = 4.8e-229 Identity = 392/395 (99.24%), Postives = 394/395 (99.75%), Query Frame = 0
BLAST of Carg04898 vs. NCBI nr
Match: XP_023513888.1 (uncharacterized protein LOC111778349 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513889.1 uncharacterized protein LOC111778349 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 799.7 bits (2064), Expect = 5.3e-228 Identity = 391/395 (98.99%), Postives = 393/395 (99.49%), Query Frame = 0
BLAST of Carg04898 vs. NCBI nr
Match: XP_023005030.1 (uncharacterized protein LOC111498146 isoform X1 [Cucurbita maxima] >XP_023005031.1 uncharacterized protein LOC111498146 isoform X1 [Cucurbita maxima]) HSP 1 Score: 793.9 bits (2049), Expect = 2.9e-226 Identity = 388/395 (98.23%), Postives = 390/395 (98.73%), Query Frame = 0
BLAST of Carg04898 vs. NCBI nr
Match: XP_022960325.1 (uncharacterized protein LOC111461086 isoform X2 [Cucurbita moschata] >XP_022960326.1 uncharacterized protein LOC111461086 isoform X2 [Cucurbita moschata]) HSP 1 Score: 790.8 bits (2041), Expect = 2.5e-225 Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 0
BLAST of Carg04898 vs. NCBI nr
Match: XP_023513890.1 (uncharacterized protein LOC111778349 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023513891.1 uncharacterized protein LOC111778349 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 787.3 bits (2032), Expect = 2.7e-224 Identity = 385/388 (99.23%), Postives = 386/388 (99.48%), Query Frame = 0
BLAST of Carg04898 vs. TAIR10
Match: AT3G24740.1 (Protein of unknown function (DUF1644)) HSP 1 Score: 332.8 bits (852), Expect = 3.3e-91 Identity = 188/362 (51.93%), Postives = 229/362 (63.26%), Query Frame = 0
BLAST of Carg04898 vs. TAIR10
Match: AT3G25910.1 (Protein of unknown function (DUF1644)) HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49 Identity = 123/341 (36.07%), Postives = 172/341 (50.44%), Query Frame = 0
BLAST of Carg04898 vs. TAIR10
Match: AT1G68140.1 (Protein of unknown function (DUF1644)) HSP 1 Score: 175.3 bits (443), Expect = 8.9e-44 Identity = 104/311 (33.44%), Postives = 140/311 (45.02%), Query Frame = 0
BLAST of Carg04898 vs. TAIR10
Match: AT1G77770.1 (Protein of unknown function (DUF1644)) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-37 Identity = 88/269 (32.71%), Postives = 124/269 (46.10%), Query Frame = 0
BLAST of Carg04898 vs. TAIR10
Match: AT4G08460.1 (Protein of unknown function (DUF1644)) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-37 Identity = 83/257 (32.30%), Postives = 118/257 (45.91%), Query Frame = 0
BLAST of Carg04898 vs. TrEMBL
Match: tr|A0A1S3BGH8|A0A1S3BGH8_CUCME (uncharacterized protein LOC103489748 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489748 PE=4 SV=1) HSP 1 Score: 713.8 bits (1841), Expect = 2.5e-202 Identity = 351/395 (88.86%), Postives = 368/395 (93.16%), Query Frame = 0
BLAST of Carg04898 vs. TrEMBL
Match: tr|A0A0A0K9V2|A0A0A0K9V2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G337080 PE=4 SV=1) HSP 1 Score: 710.7 bits (1833), Expect = 2.1e-201 Identity = 349/388 (89.95%), Postives = 365/388 (94.07%), Query Frame = 0
BLAST of Carg04898 vs. TrEMBL
Match: tr|A0A1S3BH14|A0A1S3BH14_CUCME (uncharacterized protein LOC103489748 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489748 PE=4 SV=1) HSP 1 Score: 708.8 bits (1828), Expect = 8.1e-201 Identity = 349/390 (89.49%), Postives = 365/390 (93.59%), Query Frame = 0
BLAST of Carg04898 vs. TrEMBL
Match: tr|A0A1S3BHP5|A0A1S3BHP5_CUCME (uncharacterized protein LOC103489748 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489748 PE=4 SV=1) HSP 1 Score: 704.5 bits (1817), Expect = 1.5e-199 Identity = 347/388 (89.43%), Postives = 363/388 (93.56%), Query Frame = 0
BLAST of Carg04898 vs. TrEMBL
Match: tr|A0A2P4KWI5|A0A2P4KWI5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_31044 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 5.6e-125 Identity = 249/395 (63.04%), Postives = 294/395 (74.43%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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