CmaCh17G009330 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G009330
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionHIT-type zinc finger family protein
LocationCma_Chr17 : 7003141 .. 7005992 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCTAGTCATCGTCGCCGGTGAAATTCAGAACCGGCGCTCGTTCCAGTGTCCAAGATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGAGAAGGAGGATCATCACTCTGCGAAGAGTGTAAATCGAAGCCATCCAAGTACAAGTGCCCCGCTTGCTCATTGCGCTCTTGTAGCCTCAACTGCGTCAATGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTCAACGATTCCATCCTTCTTTCTGGTACTTGAACTCCCTCCCTCGATTCATCTCACTGGTTTTGAATGTTTCAATTACTACTGATTTTGCGTTAGTGGTTCTGGAACTGTTTAGCTTTGTAATTTGATTGGATTCGCATATCTGTGTTCTTGCGTCTCTAAGAATGGATATAATGGTTGTTTTTACGACATGTAGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGCCTACCATTTCATCTTAAAAGTTTGGGCACTGCTGCTTCAAGCAGGAGAACAAAAATCATGTTTCTCCCTACAGAAATGACAAAGGGAAAACAATCAAACTCGACATGACAAGAGGTTATCTTCTCCTTATTTATCCATGTGTTATCTAGAAAGCTGTATCCTCTGATGTTGAGGACTGATGGAAGAGAGTCTCACATTCGCTAATTAAGGGATTATCATGAATTTATAGGTAAGGAATACATCTCTATTGGTATGAGTCATTTTGGGAAAACCCAAAGTAAAGCCATGAGAGCTTATGCTCAAAGTGGATAATATCATATCATTGTGGAGAGTGGTGATTCCTAACATAATGATGTGGTTGGTTGATTTTCTTAATCCCAAGTACTCAGTAGCAGAATTTTAGATGTTTTTACTCCAAATGATGATCTTGGTTTGTTATTGTATTTGAACTTTGTAGACCATTGATCACCATGTAAACATTTTGTATATTGACAGTCACTTCACTGTGCTCAACCTTCAAGTTAGTAACTGTAGTTTGTTTTAAGAATGGAAGTGGTCATACTGCAGGTTTGATAATAAGAATTCTTCAGGATTAGGCCAATCAATCAGGCACCTAGTTTGTTATTCTGGGAAGCAATTCTACTTAAGTTTTTCTCTTTTCTTTTCTGAAATTGTTCCTTGATAAACGAAGTTTCTTTGTTTACAGGGAAAAAACAATCTTCTGGACAATGGAATGGCGGTTTAACTCTACAGATATTGTTTTAGTTGACCATGGGTGAGTTCTTTTCCCAACGCCATAGGAAGGATGGTTTATTATCATTTTATTTTGGTTCTTTCCTCCAAAATCATGCCTAGTGATTGGACCTGAATAATGAAATGCTTTGAAAGTATTTCCTTTTTCTGCAGAGTTAATGAAAGCTCGAAGCTCTGTACCATTCTTGAAAACCATCTACAACCAAGTCCGTGGAAAAATCAACTTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACAAATCCCAAGGTTTTATTTCAGTTCCTTTGGGTTGTTTCTCAAGTATTTCATATAAGATGTAGTCGATTAGTGGCATAGCCCGTGAGATCCCACGTTGGTTGGAGAGGAGAATGAAGCATCTTTTATAAGGGTGTGGAAACCTCTCCCTAAAAGACGCGTTTTAAAACTGTGAGGCTGACGACGATATGTAATGGGCCTAAACGGACAATATCGGTTAGCGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTCAGACACCGAGCGATGTGCCAACGAGGACGCTGGGCCTCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGAAAATGAATCATTCCTTACAAAAGTGTGGAAACCTCTTCCTAAAAACACGTTTTAAAACCGTGAGGTTGACAGTAATACGTAATGGGCCAAAGCAGAAAATATTTGTTAGCGGTAACCGGTGCACTTCTGTCCTACAGCCCGCTTGTCATTTGTCTGTCATTATTTTGTAATTACAAGGTAGAGAGCCATGTAGTCTCTTTTTTGATGTAAAAGAAAAGGTAAAGTAAACCGCTCTAGGATTAGTGTCATGTTTGAGCATGGAATTAGAACGATTTTGTCAATTCACTTAATGAAGCATTCCTTAAGGACGGATTGTATAGTAGCTATTTGCTTGAAAGAATTAGATATCCAAGAGCTTCCTTTAACTTGCCTTGTTTATTATGTTTAATATGTATATAGGGAGCTACATCGCCTTTCCGTGAGCTGGACTCGAGATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTATTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTTAAAACGGCCAATCCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTGCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGCAATCCTCAGGTTCTTGATCTGTTGAAAGTATCAACTTCAAGCCCACACCCAAAACCTGCATGGTGCTACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCAGTTCCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGCTAGATACATGCTCAAATATCATGGCACAAATCAATTCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGAAGAACTGGAGGAAGGAGAGATTATGGAATAG

mRNA sequence

AACCTAGTCATCGTCGCCGGTGAAATTCAGAACCGGCGCTCGTTCCAGTGTCCAAGATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGAGAAGGAGGATCATCACTCTGCGAAGAGTGTAAATCGAAGCCATCCAAGTACAAGTGCCCCGCTTGCTCATTGCGCTCTTGTAGCCTCAACTGCGTCAATGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTCAACGATTCCATCCTTCTTTCTGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGCCTACCATTTCATCTTAAAAGTTTGGGCACTGCTGCTTCAAGCAGGAGAACAAAAATCATGGAAAAAACAATCTTCTGGACAATGGAATGGCGGTTTAACTCTACAGATATTGTTTTAGTTGACCATGGAGTTAATGAAAGCTCGAAGCTCTGTACCATTCTTGAAAACCATCTACAACCAAGTCCGTGGAAAAATCAACTTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACAAATCCCAAGGGAGCTACATCGCCTTTCCGTGAGCTGGACTCGAGATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTATTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTTAAAACGGCCAATCCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTGCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGCAATCCTCAGTATCAACTTCAAGCCCACACCCAAAACCTGCATGGTGCTACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCAGTTCCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGCTAGATACATGCTCAAATATCATGGCACAAATCAATTCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGAAGAACTGGAGGAAGGAGAGATTATGGAATAG

Coding sequence (CDS)

ATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGAGAAGGAGGATCATCACTCTGCGAAGAGTGTAAATCGAAGCCATCCAAGTACAAGTGCCCCGCTTGCTCATTGCGCTCTTGTAGCCTCAACTGCGTCAATGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTCAACGATTCCATCCTTCTTTCTGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGCCTACCATTTCATCTTAAAAGTTTGGGCACTGCTGCTTCAAGCAGGAGAACAAAAATCATGGAAAAAACAATCTTCTGGACAATGGAATGGCGGTTTAACTCTACAGATATTGTTTTAGTTGACCATGGAGTTAATGAAAGCTCGAAGCTCTGTACCATTCTTGAAAACCATCTACAACCAAGTCCGTGGAAAAATCAACTTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACAAATCCCAAGGGAGCTACATCGCCTTTCCGTGAGCTGGACTCGAGATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTATTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTTAAAACGGCCAATCCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTGCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGCAATCCTCAGTATCAACTTCAAGCCCACACCCAAAACCTGCATGGTGCTACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCAGTTCCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGCTAGATACATGCTCAAATATCATGGCACAAATCAATTCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGAAGAACTGGAGGAAGGAGAGATTATGGAATAG

Protein sequence

MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASSRRTKIMEKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSPWKNQLQKFCEQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCNPQYQLQAHTQNLHGATLGNHEFGNGPNSSSQAEELAVPKGLEFDFEQDLLDTCSNIMAQINSDDFLDWEGDFSKGVEELEEGEIME
Homology
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BLAST of CmaCh17G009330 vs. Swiss-Prot
Match: BCD1_PONAB (Box C/D snoRNA protein 1 OS=Pongo abelii GN=ZNHIT6 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-16
Identity = 63/244 (25.82%), Postives = 108/244 (44.26%), Query Frame = 1 

Query: 16  REGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDS 75
           R+   S CE C ++ +KY+CP C   SCSL CV  HK    C G R     + + QF + 
Sbjct: 208 RKLAMSRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEM 267

Query: 76  ILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYF------RLPFHLKSLGTAASSRRT 135
            LLSDY  LE+V R A+   R  F K+     H YF      R   +LK L    + R+ 
Sbjct: 268 NLLSDYRFLEDVARTADHISRDAFLKRPISNKHMYFMKNRARRQGINLKLLPNGFTKRKE 327

Query: 136 KI-----MEKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSP----WKNQLQ 195
                   ++   W ++ +F  +    ++  V +   +  IL+ ++ P       + +L+
Sbjct: 328 NSTFFDKKKQQFCWHVKLQFPQSQAEYIEKRVPDDKTINEILKPYIDPEKSDPVIRQRLK 387

Query: 196 KFCEQLDSLKFFVRTN-PKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNF 242
            +      ++  ++    +     + ELD    +     N V +EYP ++VVL     + 
Sbjct: 388 AYIRSQTGVQILMKIEYMQQNLVRYYELDPYKSLLDNLRNKVIIEYPTLHVVLKGSNNDM 447

[Close]
BLAST of CmaCh17G009330 vs. Swiss-Prot
Match: BCD1_HUMAN (Box C/D snoRNA protein 1 OS=Homo sapiens GN=ZNHIT6 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.6e-15
Identity = 62/243 (25.51%), Postives = 107/243 (44.03%), Query Frame = 1 

Query: 16  REGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDS 75
           R+   S CE C ++ +KY+CP C   SCSL CV  HK    C G R     + + QF + 
Sbjct: 213 RKLAMSRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEM 272

Query: 76  ILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYF------RLPFHLKSLGTAASSRRT 135
            LLSDY  LE+V R A+   R  F K+     + YF      R   +LK L    + R+ 
Sbjct: 273 NLLSDYRFLEDVARTADHISRDAFLKRPISNKYMYFMKNRARRQGINLKLLPNGFTKRKE 332

Query: 136 KI-----MEKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSP----WKNQLQ 195
                   ++   W ++ +F  +    ++  V +   +  IL+ ++ P       + +L+
Sbjct: 333 NSTFFDKKKQQFCWHVKLQFPQSQAEYIEKRVPDDKTINEILKPYIDPEKSDPVIRQRLK 392

Query: 196 KFCEQLDSLKFFVRTN-PKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNF 241
            +      ++  ++    +     + ELD    +     N V +EYP ++VVL     + 
Sbjct: 393 AYIRSQTGVQILMKIEYMQQNLVRYYELDPYKSLLDNLRNKVIIEYPTLHVVLKGSNNDM 452

[Close]
BLAST of CmaCh17G009330 vs. Swiss-Prot
Match: BCD1_MOUSE (Box C/D snoRNA protein 1 OS=Mus musculus GN=Znhit6 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 3.4e-11
Identity = 37/83 (44.58%), Postives = 46/83 (55.42%), Query Frame = 1 

Query: 14  SNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFN 73
           S R+   S CE C ++ +KY+CP C   SCSL CV  HK    C+G R     V L QF 
Sbjct: 202 SKRKLALSRCETCGTEEAKYRCPRCMRFSCSLPCVKKHKADLTCSGVRDKTAYVSLQQFT 261

Query: 74  DSILLSDYNLLEEVKRMAESAQR 97
           +  LLSDY  LE+V R A+   R
Sbjct: 262 EMNLLSDYRFLEDVARTADKVSR 284

[Close]
BLAST of CmaCh17G009330 vs. Swiss-Prot
Match: BCD1_SCHPO (Putative box C/D snoRNA protein SPCC613.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC613.07 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07
Identity = 73/313 (23.32%), Postives = 129/313 (41.21%), Query Frame = 1 

Query: 13  SSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQF 72
           S NR G   +C  C+   SKY+CP C  R C L C   HKR + C+G+R     VP S+ 
Sbjct: 2   SENRLG---ICSTCQKNASKYRCPRCDSRFCCLECNLEHKRLTKCSGERDPATFVPKSKL 61

Query: 73  NDSILLSDYNLLEEVKRMA--------ESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASS 132
            +  L SD+N L  V+R+         + + R  +       +  R   ++K    +   
Sbjct: 62  VNH-LNSDFNFLSGVERLINRKENGSHQVSNRAERNRLQLKRSLERAGINIKFAPPSNKK 121

Query: 133 R---RTKIMEKT--IFWTMEW--RFNSTDIVLVDHGVNESSKLCTILENHLQPSPWKNQL 192
           R   RT   +K+  I W++EW    +ST   L D    E+S+   I  +H +  P +   
Sbjct: 122 RRLNRTHYDKKSHLIKWSIEWCLHESSTSKDLTD----EASENTIITHSHPESEPLEKIF 181

Query: 193 QKFCEQ---------------LDSLKFFVRTNPKGATS-PFRELDSRLPIRQLFYNLVFV 252
           +K  E+                D ++F +++    +    +++++    +     N    
Sbjct: 182 RKLVEENSEMNSQVSKANIHAPDDMQFMIKSRKSRSKGFIYKKIEPSNSLSSCLRNSFVF 241

Query: 253 EYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDD-NSC 294
           E P I+ V  S T            S   +D+++  + ++  E      E   DD+ N  
Sbjct: 242 EVPTIH-VFTSTTQVHTESSYETSSSEQSDDSSSSSSCISDSE------ESSSDDELNEL 299

[Close]
BLAST of CmaCh17G009330 vs. Swiss-Prot
Match: BCD1_YEAST (Box C/D snoRNA protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCD1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.3e-06
Identity = 29/79 (36.71%), Postives = 42/79 (53.16%), Query Frame = 1 

Query: 22 LCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK----RKHIQLVPLSQFND--- 81
          LC  C  K  KYKCP C +++CSL C   HK    C+G+    +++I    L Q +D   
Sbjct: 4  LCGVCGIKEFKYKCPRCLVQTCSLECSKKHKTRDNCSGQTHDPKEYISSEALKQADDDKH 63

Query: 82 ---SILLSDYNLLEEVKRM 91
             + +  DYN L ++KRM
Sbjct: 64 ERNAYVQRDYNYLTQLKRM 82

[Close]
BLAST of CmaCh17G009330 vs. TrEMBL
Match: A0A0A0K6N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429490 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 3.3e-154
Identity = 300/419 (71.60%), Postives = 317/419 (75.66%), Query Frame = 1 

Query: 1   MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60
           MAE DATV+ STSSN++G SSLCEECKS PSKYKCPACS+RSCSLNCVNAHKR SGCTGK
Sbjct: 1   MAEVDATVAVSTSSNQQG-SSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGK 60

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGT 120
           RK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSL  
Sbjct: 61  RKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRA 120

Query: 121 AASSRRTKIM-------------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLC 180
           AAS+RRTKIM                   EKTIFWTMEWRFNSTDIVLVDH VNE+SKL 
Sbjct: 121 AASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNENSKLS 180

Query: 181 TILENHLQPSPWKNQLQKFCEQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFV 240
           TILENHL+P PWK QLQKF EQLD LKFFVRT PKGATS F ELDS LPIRQLF NL FV
Sbjct: 181 TILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSNLAFV 240

Query: 241 EYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCN 300
           EYP+IYVVLPSQTPNF+VVKTANP+S N E  N  KNDLASHEGV FRVEEIE+D+NSCN
Sbjct: 241 EYPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDENSCN 300

Query: 301 PQY-----------QLQAHTQNLHGAT-------LGNHEFGNGPNSSSQAEELAVPKGLE 360
           PQ              +   +NLHGAT       +G  E GN P SSSQA E  V K LE
Sbjct: 301 PQVLDLMKVSTSSPHCKVSPRNLHGATHSYSTGLVGKQEVGNSPKSSSQAREPGVVKELE 360

Query: 361 FDFEQDLLDTCSNIMAQINSDDFLDWEGDFSK---------------GVEELEEGEIME 368
           FDFEQDL+D  SNIMAQIN DDFLDW+GDFSK                VEELEEGEIME
Sbjct: 361 FDFEQDLIDAYSNIMAQINPDDFLDWDGDFSKEVEMEGSGELLGDAFTVEELEEGEIME 418

[Close]
BLAST of CmaCh17G009330 vs. TrEMBL
Match: A0A061DVF2_THECC (HIT-type Zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005940 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.0e-95
Identity = 190/398 (47.74%), Postives = 263/398 (66.08%), Query Frame = 1 

Query: 14  SNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFN 73
           S++     +CEECK+K SKYKCP C LR+CSL C+NAHK  +GC G+R + + VPLSQF+
Sbjct: 6   SSKSSTKGVCEECKNKASKYKCPGCYLRTCSLPCINAHKHRTGCNGRRNNTRFVPLSQFD 65

Query: 74  DSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASSRRTKIM--- 133
           D++LLSDYNLLEE KR+AESA+R R KLC     +F+LPF L++L  AA+SRRTK++   
Sbjct: 66  DNLLLSDYNLLEETKRVAESARRTRSKLCSNYFPHFKLPFVLRTLRAAAASRRTKLLFLP 125

Query: 134 ----------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSPWK 193
                           +K I WT+EWRF+STD+VL DHGV+E + LC+++ENHL+P PW 
Sbjct: 126 AGMSKRETNQTRFHQRKKFISWTIEWRFHSTDVVLFDHGVHEDTTLCSVIENHLKPGPWN 185

Query: 194 NQLQKFC-EQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQ 253
           + L+ FC EQLD LKFF+R  PKG  SPF+ELD + PIRQ   + V +EYP+I+V LPS+
Sbjct: 186 HPLRPFCQEQLDCLKFFIRKYPKGPKSPFQELDMKAPIRQQLADTVILEYPVIHVFLPSE 245

Query: 254 TPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCNPQ-YQLQAH--T 313
              F+VV+  + ++H PE  ++G  D    +GV F+ E+IE+DD+S +PQ + L  H  +
Sbjct: 246 HYEFEVVRENHSVTHRPEVKDSGSADNEIQKGVTFKEEKIEEDDSSLDPQVFDLMKHVIS 305

Query: 314 QNLHGATLGNHE----FGNGPNSSSQAEELAVPKGLEFDFEQDLLDTCSNIMAQINSDDF 368
             +H     N       GN  +SSSQ ++  V +G+EFDF+QDL+D  S+++A+IN DDF
Sbjct: 306 SPMHQIPYENKSEKAGAGNRVHSSSQTKDSGVFQGMEFDFDQDLIDAYSDLIAEINPDDF 365

[Close]
BLAST of CmaCh17G009330 vs. TrEMBL
Match: A5AJP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00650 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.5e-93
Identity = 195/382 (51.05%), Postives = 243/382 (63.61%), Query Frame = 1 

Query: 22  LCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDY 81
           LC+ECK  PSKY CP CS+RSCSL CV AHK+ +GCTGKR+  Q VPLSQF+D++LLSDY
Sbjct: 14  LCQECKLNPSKYTCPGCSVRSCSLPCVKAHKQQTGCTGKRQQTQFVPLSQFDDNLLLSDY 73

Query: 82  NLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASSRRTKIM----------- 141
           NLLEEVK +AESAQR R KLC Y+   F  P+HL+ L  AA SRRTK++           
Sbjct: 74  NLLEEVKSVAESAQRRRVKLCGYSQLKF--PYHLRGLRNAAGSRRTKLLFLPSGMSKREK 133

Query: 142 --------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSPWKNQLQKFC- 201
                    K I WT+EWRF+STD+VL+DHG+NE+S L +++E HL+P PW ++L+ FC 
Sbjct: 134 NKSQYNQRSKCITWTIEWRFHSTDVVLLDHGINENSTLSSVIEKHLKPGPWNHKLKPFCA 193

Query: 202 EQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNFQVVK 261
           EQLD LKFF+R  PKG  SPF ELD R PIRQ F NL  +EYP I+V LPS + +F V+K
Sbjct: 194 EQLDCLKFFIRKYPKGPRSPFHELDIRAPIRQQFANLAILEYPQIHVFLPSHSYDFDVIK 253

Query: 262 TANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCNPQ-YQLQAHTQNLHGATLGN 321
            ANP     E   +   D  S +G++FR EEIE+   S + +   L  H ++        
Sbjct: 254 DANPRHRQAELKESLTIDQPSPKGISFREEEIEEHGGSLDSKVLDLMQHVKSTQ------ 313

Query: 322 HEFGNGPNSSSQAEELAVPKGLEFDFEQDLLDTCSNIMAQINSDDFLDWEGDFSK----- 366
               N P SS Q +E    + ++FDFEQ LLD  S+I+AQIN DDFLDWEGDFSK     
Sbjct: 314 ---ANKPQSSPQKKEPG--ENIDFDFEQGLLDVYSDIIAQINPDDFLDWEGDFSKEVKSE 373

[Close]
BLAST of CmaCh17G009330 vs. TrEMBL
Match: F6HBM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00200 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.0e-92
Identity = 194/382 (50.79%), Postives = 241/382 (63.09%), Query Frame = 1 

Query: 22  LCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDY 81
           LC+ECK  PSKY CP CS+RSCSL CV AHK+ +GCTGKR+  Q VPLSQF+D++LLSDY
Sbjct: 14  LCQECKLNPSKYTCPGCSVRSCSLPCVKAHKQQTGCTGKRQQTQFVPLSQFDDTLLLSDY 73

Query: 82  NLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASSRRTKIM----------- 141
           NLLEEVK +AESAQR R KLC Y+   F  P+HL+ L  AA SRRTK++           
Sbjct: 74  NLLEEVKSVAESAQRRRVKLCGYSQLKF--PYHLRGLRNAAGSRRTKLLFLPSGMSKREK 133

Query: 142 --------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSPWKNQLQKFC- 201
                    K I WT+EWRF+STD+VL+DHG+NE+S   +++E HL+P PW ++L+ FC 
Sbjct: 134 NKSQYNQRSKCITWTIEWRFHSTDVVLLDHGINENSTFSSVIEKHLKPGPWNHKLKPFCA 193

Query: 202 EQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNFQVVK 261
           EQLD LKFF+R  PKG  SPF ELD   PIRQ F NLV +EYP I+V LPS + +F   K
Sbjct: 194 EQLDCLKFFIRKYPKGPRSPFHELDISAPIRQQFANLVILEYPQIHVFLPSHSYDFDATK 253

Query: 262 TANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCNPQ-YQLQAHTQNLHGATLGN 321
            ANP     E   +   D  S +G++FR EEIE+   S + Q   L  H ++        
Sbjct: 254 DANPCHRRAELKESLTIDHPSPKGISFREEEIEEHGGSLDSQVLDLMQHVKSTQ------ 313

Query: 322 HEFGNGPNSSSQAEELAVPKGLEFDFEQDLLDTCSNIMAQINSDDFLDWEGDFSK----- 366
               N P SS Q +E +  + ++FDFEQ LLD  S+I+AQIN DDFLDWEGDFSK     
Sbjct: 314 ---ANKPQSSPQKKEPS--ENIDFDFEQGLLDVYSDIIAQINPDDFLDWEGDFSKEVKSE 373

[Close]
BLAST of CmaCh17G009330 vs. TrEMBL
Match: M5X6V1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006367mg PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-91
Identity = 196/382 (51.31%), Postives = 246/382 (64.40%), Query Frame = 1 

Query: 20  SSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDSILLS 79
           + +CEECK+ PSKYKCP CS+RSCSL CV AHK  +GCTGKR     VPLSQ +++ LLS
Sbjct: 17  AQICEECKANPSKYKCPGCSIRSCSLPCVKAHKLRTGCTGKRNQTNFVPLSQIDNNQLLS 76

Query: 80  DYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASSRRTKIM--------- 139
           DYNLLEEVKR++ESAQR R KLC Y   Y+RLP HLKSL  AASSRRTK++         
Sbjct: 77  DYNLLEEVKRVSESAQRLRNKLCRYN--YYRLPDHLKSLRGAASSRRTKLLFLPSGMSKR 136

Query: 140 ----------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSPWKNQLQKF 199
                     +K I WT+EWRF+STD+VL DH VNE++K C+I+ENHL+P PW +QL+ F
Sbjct: 137 EKNQTRYDRRKKCISWTIEWRFHSTDVVLTDHEVNENTKFCSIIENHLKPGPWNHQLRLF 196

Query: 200 C-EQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNFQV 259
           C EQLD L+ F+R  PKGA SP  ELD R+PIRQ   NLV +EYP+IYV LPSQ+ +F V
Sbjct: 197 CEEQLDCLRLFIRKYPKGARSPLCELDIRVPIRQQLTNLVILEYPVIYVFLPSQSLDFGV 256

Query: 260 VKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCNPQYQL------------- 319
           VK A P    PE    G+ND  S  GV F+ EEIE +DNS    + L             
Sbjct: 257 VKNATPSFCKPELKTYGRND-PSAGGVPFKEEEIE-EDNSYPKVFDLMKRETSSSLPLIS 316

Query: 320 ------QAHTQNLHGATLGNHEFGNGPNSSSQAEELAVPKGLEFDFEQDLLDTCSNIMAQ 363
                 +A   +L           N  +S S A+E  + + ++FDF+Q L+DT SN++A+
Sbjct: 317 SRSRCEKAPDDSLTKTLPATVATDNDSHSDSNAKEQGLFEDMDFDFDQGLIDTYSNLIAE 376

[Close]
BLAST of CmaCh17G009330 vs. TAIR10
Match: AT1G04945.3 (AT1G04945.3 HIT-type Zinc finger family protein)

HSP 1 Score: 304.3 bits (778), Expect = 1.0e-82
Identity = 172/393 (43.77%), Postives = 245/393 (62.34%), Query Frame = 1 

Query: 21  SLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGKRKHIQLVPLSQFNDSILLSD 80
           S+CEECK  P KYKCP CS+RSC+L CV AHK+ +GCTGKRK   +VPLS+F+D++LLSD
Sbjct: 256 SVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLSD 315

Query: 81  YNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGTAASSRRTKI----------- 140
           YN+LEE KR+AESA R R +LC   H  ++LP+ LKSL +AA SRRTK+           
Sbjct: 316 YNMLEETKRVAESALRRRSQLCK-NHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLKRE 375

Query: 141 --------MEKTIFWTMEWRFNSTDIVLVDHGVNESSKLCTILENHLQPSPWKNQLQKFC 200
                     K I WT+EWRF+STD++LVDHGV E   LC++++NHL+P PW ++L+ FC
Sbjct: 376 NNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKPFC 435

Query: 201 E-QLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFVEYPIIYVVLPSQTPNFQVV 260
           +  LDSLK F+R  PKGA +PF+ELD + P+R+    +V +EYP+I+V LPSQ+  F+V+
Sbjct: 436 DVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFKVI 495

Query: 261 KTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDD-NSCNPQYQLQAHTQNLHGATLG 320
           K  N  + NP D+    +   +  G+ FR EEIE+DD +S  P+        N +     
Sbjct: 496 KDFN-TTPNPNDSLYDGHGCTN--GITFREEEIEEDDIDSFEPEVLGLMKQMNYNPCLRV 555

Query: 321 NHEF---GNGPNSSS---QAEELAVPKGLEFDFEQDLLDTCSNIMAQINSDDFLDWEGDF 368
           + +    G G N+S+      E      +E +FEQ L+DT S++ A++N  D+ ++E +F
Sbjct: 556 SEKSKAEGVGTNNSNPQVDTTEQEDAGNMELEFEQGLIDTYSDLFAEMNPGDYFNFECEF 615

[Close]
BLAST of CmaCh17G009330 vs. NCBI nr
Match: gi|700189930|gb|KGN45163.1| (hypothetical protein Csa_7G429490 [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 4.7e-154
Identity = 300/419 (71.60%), Postives = 317/419 (75.66%), Query Frame = 1 

Query: 1   MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60
           MAE DATV+ STSSN++G SSLCEECKS PSKYKCPACS+RSCSLNCVNAHKR SGCTGK
Sbjct: 1   MAEVDATVAVSTSSNQQG-SSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGK 60

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGT 120
           RK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSL  
Sbjct: 61  RKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRA 120

Query: 121 AASSRRTKIM-------------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLC 180
           AAS+RRTKIM                   EKTIFWTMEWRFNSTDIVLVDH VNE+SKL 
Sbjct: 121 AASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNENSKLS 180

Query: 181 TILENHLQPSPWKNQLQKFCEQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFV 240
           TILENHL+P PWK QLQKF EQLD LKFFVRT PKGATS F ELDS LPIRQLF NL FV
Sbjct: 181 TILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSNLAFV 240

Query: 241 EYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCN 300
           EYP+IYVVLPSQTPNF+VVKTANP+S N E  N  KNDLASHEGV FRVEEIE+D+NSCN
Sbjct: 241 EYPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDENSCN 300

Query: 301 PQY-----------QLQAHTQNLHGAT-------LGNHEFGNGPNSSSQAEELAVPKGLE 360
           PQ              +   +NLHGAT       +G  E GN P SSSQA E  V K LE
Sbjct: 301 PQVLDLMKVSTSSPHCKVSPRNLHGATHSYSTGLVGKQEVGNSPKSSSQAREPGVVKELE 360

Query: 361 FDFEQDLLDTCSNIMAQINSDDFLDWEGDFSK---------------GVEELEEGEIME 368
           FDFEQDL+D  SNIMAQIN DDFLDW+GDFSK                VEELEEGEIME
Sbjct: 361 FDFEQDLIDAYSNIMAQINPDDFLDWDGDFSKEVEMEGSGELLGDAFTVEELEEGEIME 418

[Close]
BLAST of CmaCh17G009330 vs. NCBI nr
Match: gi|778728727|ref|XP_011659467.1| (PREDICTED: box C/D snoRNA protein 1-like [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 2.0e-152
Identity = 296/408 (72.55%), Postives = 314/408 (76.96%), Query Frame = 1 

Query: 1   MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60
           MAE DATV+ STSSN++G SSLCEECKS PSKYKCPACS+RSCSLNCVNAHKR SGCTGK
Sbjct: 1   MAEVDATVAVSTSSNQQG-SSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGK 60

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGT 120
           RK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSL  
Sbjct: 61  RKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRA 120

Query: 121 AASSRRTKIM-------------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLC 180
           AAS+RRTKIM                   EKTIFWTMEWRFNSTDIVLVDH VNE+SKL 
Sbjct: 121 AASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNENSKLS 180

Query: 181 TILENHLQPSPWKNQLQKFCEQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFV 240
           TILENHL+P PWK QLQKF EQLD LKFFVRT PKGATS F ELDS LPIRQLF NL FV
Sbjct: 181 TILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSNLAFV 240

Query: 241 EYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCN 300
           EYP+IYVVLPSQTPNF+VVKTANP+S N E  N  KNDLASHEGV FRVEEIE+D+NSCN
Sbjct: 241 EYPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDENSCN 300

Query: 301 PQY--QLQAHTQNLHGAT-----LGNHEFGNGPNSSSQAEELAVPKGLEFDFEQDLLDTC 360
           PQ    ++  T + H        +G  E GN P SSSQA E  V K LEFDFEQDL+D  
Sbjct: 301 PQVLDLMKVSTSSPHCKVSPRNLVGKQEVGNSPKSSSQAREPGVVKELEFDFEQDLIDAY 360

Query: 361 SNIMAQINSDDFLDWEGDFSK---------------GVEELEEGEIME 368
           SNIMAQIN DDFLDW+GDFSK                VEELEEGEIME
Sbjct: 361 SNIMAQINPDDFLDWDGDFSKEVEMEGSGELLGDAFTVEELEEGEIME 407

[Close]
BLAST of CmaCh17G009330 vs. NCBI nr
Match: gi|659122645|ref|XP_008461252.1| (PREDICTED: box C/D snoRNA protein 1-like [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-150
Identity = 293/408 (71.81%), Postives = 311/408 (76.23%), Query Frame = 1 

Query: 1   MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60
           MAE DAT++ STSSN +G SSLCEECKS PSKYKCPACS+RSCSLNCVNAHKR SGCTGK
Sbjct: 1   MAEEDATMAVSTSSNHQG-SSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGK 60

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGT 120
           RK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSL  
Sbjct: 61  RKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRA 120

Query: 121 AASSRRTKIM-------------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLC 180
           AAS+RRTKIM                   EKTIFWTMEWRFNST+IVLVDH VNE+SKL 
Sbjct: 121 AASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTNIVLVDHEVNENSKLS 180

Query: 181 TILENHLQPSPWKNQLQKFCEQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVFV 240
           TIL NHL+PSPWK QLQKF EQLD LK FVRT PKGA SPF ELDS LPIRQLF NL FV
Sbjct: 181 TILANHLRPSPWKTQLQKFREQLDCLKVFVRTYPKGAKSPFHELDSTLPIRQLFSNLAFV 240

Query: 241 EYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDNSCN 300
           EYP+IYVVLP QTPNF+VVKTANP S N E +N  +NDLASH GV FRVEEIEDD+NSCN
Sbjct: 241 EYPVIYVVLPFQTPNFEVVKTANPASRNLEGSNALENDLASHVGVCFRVEEIEDDENSCN 300

Query: 301 PQY--QLQAHTQNLHGAT-----LGNHEFGNGPNSSSQAEELAVPKGLEFDFEQDLLDTC 360
           PQ    ++  T + H        +G  E GN P SSSQA EL V K LEFDFEQDL+D  
Sbjct: 301 PQVLDLMKVSTSSPHCKVSPRNLVGKQEVGNSPKSSSQARELGVVKELEFDFEQDLIDAY 360

Query: 361 SNIMAQINSDDFLDWEGDFSKGV---------------EELEEGEIME 368
           SNIMAQIN DDFLDWEGDFSK V               EELEEGEIME
Sbjct: 361 SNIMAQINPDDFLDWEGDFSKEVEMEGSGELLGDAFTAEELEEGEIME 407

[Close]
BLAST of CmaCh17G009330 vs. NCBI nr
Match: gi|1009106123|ref|XP_015870748.1| (PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba])

HSP 1 Score: 373.6 bits (958), Expect = 3.9e-100
Identity = 210/424 (49.53%), Postives = 271/424 (63.92%), Query Frame = 1 

Query: 1   MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60
           M E    V  S S+ +E  S+ CEECKS PSKYKCP CS+RSCSL CV AHK+ +GCTGK
Sbjct: 4   MEERKEPVLPSNSNPKE--STFCEECKSNPSKYKCPGCSIRSCSLQCVKAHKQRTGCTGK 63

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGT 120
           R   Q VPLSQF+D  LLSDYN+LEEVKR+AESAQR R  LC Y   YFRLP+HL+SL  
Sbjct: 64  RNQTQFVPLSQFDDKQLLSDYNMLEEVKRVAESAQRMRYNLCRYN--YFRLPYHLRSLRN 123

Query: 121 AASSRRTKIM-------------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLC 180
           AASSRRTK++                   +K+I+WT+EW+F+S D+VL+DHGVNE+  LC
Sbjct: 124 AASSRRTKLLFLPSGMSKREKNQTRYDQRKKSIYWTIEWQFHSADVVLLDHGVNENMNLC 183

Query: 181 TILENHLQPSPWKNQLQKFC-EQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVF 240
           + + NHL+P PW + L+KFC EQLD LKFF+R  PKG+ SPF ELDS +PIRQ F NLV 
Sbjct: 184 SAIGNHLKPGPWNHPLRKFCEEQLDHLKFFIRKYPKGSKSPFYELDSTIPIRQQFANLVI 243

Query: 241 VEYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDN-- 300
           +EYP+IYV LPSQ+ +F+V++ ANP+   P   N+  ND  + EG AF+ EEIED+ +  
Sbjct: 244 LEYPVIYVFLPSQSCDFEVIRDANPIIRKPHLRNSKSNDHLTKEGTAFKEEEIEDNSSLE 303

Query: 301 --------SCNP----QYQLQAHTQNL-----HGATLGNHEFGNGPNSSSQAEELAVPKG 360
                     NP    Q+  Q  ++ L       A+      GN P SS + +E  + + 
Sbjct: 304 PKVFDFMKYGNPDSLHQFPHQGSSEKLLSNLSDRASSAKEVAGNSPQSSLKTKEQGLFED 363

Query: 361 LEFDFEQDLLDTCSNIMAQINSDDFLDWEGDFSKGVE------------------ELEEG 368
           +EFDF+Q L+D  S++++QIN DDFLD EG+FSK  E                  +LEEG
Sbjct: 364 MEFDFDQGLIDVYSDLISQINPDDFLDLEGEFSKEEEVEGKKNPSYLMEDFPADNDLEEG 423

[Close]
BLAST of CmaCh17G009330 vs. NCBI nr
Match: gi|1009106066|ref|XP_015868093.1| (PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba])

HSP 1 Score: 370.5 bits (950), Expect = 3.3e-99
Identity = 209/424 (49.29%), Postives = 270/424 (63.68%), Query Frame = 1 

Query: 1   MAEGDATVSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60
           M E    V  S S+ +E  S+ CEECKS PSKYKCP CS+RSCSL CV AHK+ +GCTGK
Sbjct: 4   MEERKEPVLPSNSNPKE--STFCEECKSNPSKYKCPGCSIRSCSLQCVKAHKQRTGCTGK 63

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLGT 120
           R   Q VPLSQF+D  LLSDYN+LEEVKR+AESAQR R  LC Y   YFRLP+HL+SL  
Sbjct: 64  RNQTQFVPLSQFDDKQLLSDYNMLEEVKRVAESAQRMRYNLCRYN--YFRLPYHLRSLRN 123

Query: 121 AASSRRTKIM-------------------EKTIFWTMEWRFNSTDIVLVDHGVNESSKLC 180
           AASSRRTK++                   +K+I+WT+EW+F+S D+VL+DHGVNE+  LC
Sbjct: 124 AASSRRTKLLFLPSGMSKREKNQTRYDQRKKSIYWTIEWQFHSADVVLLDHGVNENMNLC 183

Query: 181 TILENHLQPSPWKNQLQKFC-EQLDSLKFFVRTNPKGATSPFRELDSRLPIRQLFYNLVF 240
           + + NHL+P PW + L+KFC EQLD LKFF+   PKG+ SPF ELDS +PIRQ F NLV 
Sbjct: 184 SAIGNHLKPGPWNHPLRKFCEEQLDHLKFFICKYPKGSKSPFYELDSTIPIRQQFANLVI 243

Query: 241 VEYPIIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVAFRVEEIEDDDN-- 300
           +EYP+IYV LPSQ+ +F+V++ ANP+   P   N+  ND  + EG AF+ EEIED+ +  
Sbjct: 244 LEYPVIYVFLPSQSCDFEVIRDANPIIRKPHLRNSKSNDHLTKEGTAFKEEEIEDNSSLE 303

Query: 301 --------SCNP----QYQLQAHTQNL-----HGATLGNHEFGNGPNSSSQAEELAVPKG 360
                     NP    Q+  Q  ++ L       A+      GN P SS + +E  + + 
Sbjct: 304 PKVFDFMKYGNPDSLHQFPHQGSSEKLLSNLSDRASSAKEVAGNSPQSSLKTKEQGLFED 363

Query: 361 LEFDFEQDLLDTCSNIMAQINSDDFLDWEGDFSKGVE------------------ELEEG 368
           +EFDF+Q L+D  S++++QIN DDFLD EG+FSK  E                  +LEEG
Sbjct: 364 MEFDFDQGLIDVYSDLISQINPDDFLDLEGEFSKEEEVEGKKNPSYLMEDFPADNDLEEG 423

The following BLAST results are available for this feature:
BLAST of CmaCh17G009330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BCD1_PONAB7.8e-1625.82Box C/D snoRNA protein 1 OS=Pongo abelii GN=ZNHIT6 PE=2 SV=1[more]
BCD1_HUMAN8.6e-1525.51Box C/D snoRNA protein 1 OS=Homo sapiens GN=ZNHIT6 PE=1 SV=1[more]
BCD1_MOUSE3.4e-1144.58Box C/D snoRNA protein 1 OS=Mus musculus GN=Znhit6 PE=1 SV=2[more]
BCD1_SCHPO1.0e-0723.32Putative box C/D snoRNA protein SPCC613.07 OS=Schizosaccharomyces pombe (strain ... [more]
BCD1_YEAST7.3e-0636.71Box C/D snoRNA protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c... [more]
BLAST of CmaCh17G009330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6N1_CUCSA3.3e-15471.60Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429490 PE=4 SV=1[more]
A0A061DVF2_THECC2.0e-9547.74HIT-type Zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TC... [more]
A5AJP4_VITVI5.5e-9351.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00650 PE=4 SV=... [more]
F6HBM0_VITVI6.0e-9250.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00200 PE=4 SV=... [more]
M5X6V1_PRUPE1.3e-9151.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006367mg PE=4 SV=1[more]
BLAST of CmaCh17G009330 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04945.31.0e-8243.77 HIT-type Zinc finger family protein[more]
BLAST of CmaCh17G009330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189930|gb|KGN45163.1|4.7e-15471.60hypothetical protein Csa_7G429490 [Cucumis sativus][more]
gi|778728727|ref|XP_011659467.1|2.0e-15272.55PREDICTED: box C/D snoRNA protein 1-like [Cucumis sativus][more]
gi|659122645|ref|XP_008461252.1|1.1e-15071.81PREDICTED: box C/D snoRNA protein 1-like [Cucumis melo][more]
gi|1009106123|ref|XP_015870748.1|3.9e-10049.53PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba][more]
gi|1009106066|ref|XP_015868093.1|3.3e-9949.29PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G009330.1CmaCh17G009330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 21..48
score: 5.
IPR007529Zinc finger, HIT-typePROFILEPS51083ZF_HITcoord: 23..57
score: 10
NoneNo IPR availablePANTHERPTHR13483UNCHARACTERIZEDcoord: 12..302
score: 3.8
NoneNo IPR availablePANTHERPTHR13483:SF3BOX C/D SNORNA PROTEIN 1coord: 12..302
score: 3.8
NoneNo IPR availableunknownSSF144232HIT/MYND zinc finger-likecoord: 21..58
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G009330Cucsa.050030Cucumber (Gy14) v1cgycmaB0050
CmaCh17G009330Cla015273Watermelon (97103) v1cmawmB328
CmaCh17G009330Csa7G429490Cucumber (Chinese Long) v2cmacuB388
CmaCh17G009330MELO3C023518Melon (DHL92) v3.5.1cmameB326
CmaCh17G009330ClCG09G003830Watermelon (Charleston Gray)cmawcgB306
CmaCh17G009330CSPI07G19570Wild cucumber (PI 183967)cmacpiB392
CmaCh17G009330CmoCh08G005450Cucurbita moschata (Rifu)cmacmoB374
CmaCh17G009330CmoCh17G009050Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G009330Lsi02G026090Bottle gourd (USVL1VR-Ls)cmalsiB348
CmaCh17G009330Cp4.1LG12g06940Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G009330Cp4.1LG17g08250Cucurbita pepo (Zucchini)cmacpeB376
CmaCh17G009330MELO3C023518.2Melon (DHL92) v3.6.1cmamedB379
CmaCh17G009330CsaV3_7G031400Cucumber (Chinese Long) v3cmacucB0462
CmaCh17G009330Cla97C09G166080Watermelon (97103) v2cmawmbB387
CmaCh17G009330Bhi09G000493Wax gourdcmawgoB0487
CmaCh17G009330CsGy7G017900Cucumber (Gy14) v2cgybcmaB925
CmaCh17G009330Carg13467Silver-seed gourdcarcmaB0625
CmaCh17G009330Carg18699Silver-seed gourdcarcmaB0497
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh17G009330CmaCh08G005530Cucurbita maxima (Rimu)cmacmaB382
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G009330Watermelon (97103) v2cmawmbB360
CmaCh17G009330Watermelon (97103) v2cmawmbB364
CmaCh17G009330Wax gourdcmawgoB0485
CmaCh17G009330Cucurbita maxima (Rimu)cmacmaB247
CmaCh17G009330Cucurbita maxima (Rimu)cmacmaB250
CmaCh17G009330Cucurbita maxima (Rimu)cmacmaB360
CmaCh17G009330Cucurbita maxima (Rimu)cmacmaB364
CmaCh17G009330Cucurbita maxima (Rimu)cmacmaB366
CmaCh17G009330Cucumber (Gy14) v1cgycmaB0397
CmaCh17G009330Cucurbita moschata (Rifu)cmacmoB351
CmaCh17G009330Cucurbita moschata (Rifu)cmacmoB354
CmaCh17G009330Cucurbita moschata (Rifu)cmacmoB358
CmaCh17G009330Cucurbita moschata (Rifu)cmacmoB360
CmaCh17G009330Wild cucumber (PI 183967)cmacpiB352
CmaCh17G009330Wild cucumber (PI 183967)cmacpiB365
CmaCh17G009330Cucumber (Chinese Long) v2cmacuB361
CmaCh17G009330Melon (DHL92) v3.5.1cmameB333
CmaCh17G009330Melon (DHL92) v3.5.1cmameB337
CmaCh17G009330Watermelon (Charleston Gray)cmawcgB314
CmaCh17G009330Watermelon (97103) v1cmawmB336
CmaCh17G009330Watermelon (97103) v1cmawmB349
CmaCh17G009330Cucurbita pepo (Zucchini)cmacpeB399
CmaCh17G009330Cucurbita pepo (Zucchini)cmacpeB375
CmaCh17G009330Cucurbita pepo (Zucchini)cmacpeB397
CmaCh17G009330Cucurbita pepo (Zucchini)cmacpeB404
CmaCh17G009330Bottle gourd (USVL1VR-Ls)cmalsiB351
CmaCh17G009330Bottle gourd (USVL1VR-Ls)cmalsiB352
CmaCh17G009330Melon (DHL92) v3.6.1cmamedB389
CmaCh17G009330Melon (DHL92) v3.6.1cmamedB392
CmaCh17G009330Silver-seed gourdcarcmaB0344
CmaCh17G009330Silver-seed gourdcarcmaB0730
CmaCh17G009330Silver-seed gourdcarcmaB1133
CmaCh17G009330Silver-seed gourdcarcmaB1265
CmaCh17G009330Cucumber (Chinese Long) v3cmacucB0415
CmaCh17G009330Cucumber (Chinese Long) v3cmacucB0428
CmaCh17G009330Cucumber (Chinese Long) v3cmacucB0435