CmaCh08G005530 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G005530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	HIT-type zinc finger family protein
Location	Cma_Chr08 : 3162094 .. 3165483 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACGAAACCTAGTCGTCGTCGCCGGCGAAATTCGGAACCGGCGCCCTCTCTAGTGTCTACGATGGCTGAAGGAGATACAGTAGTAACAGCGGCAGCCGCAGCAGCTTCCACGAGCTTCAACCGCGAAGGATCATCTCTTTGCGAAGAGTGTAATTCGAACCCGTCGAAGTACAAGTGCCCCGCTTGCTCTTTGCGTTCTTGTAGTCTTGATTGCGTCAATGGCCACAAGCGGCGCAGTGGCTGTACTGGAAAAAGGAAGCAGACTCAATTCGTCCCGATTTCTCAGTTCAACGATAGTGTCCTTCTTTCCGGTACTTCAATCCACCCCTGTATTCATATCGCTGGTTTCAAGTGTTTCAATTCATACTGATTTTGGTTTTATTAGAATATTTGCGTTTCCAGTTCTCGTAAAGTAAACTTGAATTTGTAGATTGGTTTAGTCTTTTTGATCTGTTAGCTGATTTGGGTATTGTTCGTAATTGTATTTTTTGGAACGTATTTAATAATTTGTTTGAATTTAAGTCATTAGATGATATTTGATCAAGTTGTGTAGTTTGATATGATTTGTGGGAGTAATTTGTTAAGTAATTTCTGGTAATATCCGTGTTCTTATGTCCCTAACAATGGATTTGGTGCTCGTTTTACCATGCGTAGATTATAATTTGCTTGAGGAAGTGAAGAGGATGGCTGAATCTGCTCAAAGACTTAGAAAGAAATTGTGTCCCTATACTCATCCTTATTATAGGCTACCATTTCACCTTAAAAGTTTGCGCACTGCTGCTTCAAGCCGGAGAACAAAAATAATGTTTCTCCCCACTGGAATGACAAAAAGGGAGAAAAATCAAACTCGATATGATAAGAGGTTACTTTCTCTTTATTTATCTATCTATTGGCTGCTTAAAAAGTTGCATCATCATACATTGAGTAATTCGATTGGTTGAATTACAACCCTAAAGAGCTATTAGTAGATATTTGGATGTCTTGTTTTTGTTATCTATATTTTCAAAAACTTGATTTTGTTTTAAATTTTGGCTAAGAATTAAAATGTTCTCTTAAGAACGATGAAAGTCATTGTCGATAAATGATGAGAAAATAATTATGATCTCCCAAAAGCAAATATACAAAACCAAATGTTTATCAAACGAGACCTAAATTTTTATATTTCATGTTAGTAATTGTAGTTTGTTGTAAGAATGGAATTAGCCATACTCATACTGATGAATCATGAAGCACCAAACCTAAGAAGTTTTTTTGCTTACAGGGAAAAAACAATCTTCTGGACAATCGAGTGGCGGTTAAACTCTACAGATGTTGTTTTAGTTGACCACGGGTGAGTTTTCTTCCCCGAGCCACTGTAAGGATAGTAATTTATTTTGCTATTTTGGTTCTTTCCTCGAAGTTCATGGCAAGTGAACTTTTATTTGGGATGCATGCTTTAAAAATATTTTCCTTCTCCTGCAGAGTTAATGAAAACACAAATCTGTCTACCGTTCTTGAAAACCATCTACAACCAAGCCCATGGAAGAATCAAATTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACATACCCCAAGGTTATTGTTCAATTCTTATGGGTTGTCTCTCAAGTATTTCATAATCAGTCAATTAGTAGTGTAGCTAGTGCATTTCTCTGGTGACCTTTAATCATATTTTTATACATTATGCACTGGGATACGGTGTGCTTCTACGTGAAAGTCAGCTTGTGATTTGCCTATCATGTCATTAATGGGTAGAGATTCATGTAGATTTTTTGTTATACATAGGAGATAGTTACTATTATTGATATGGATAAAAGGTAATGTAACCTGTTATTGGGCTTATTGTGAGATTCAACATAGAAATGAAACATTCTTTATTAGGGTATGGAAACTTCTCCCTAGCAGACGCGTTTTAAAAACCGTGAGAGAAAGCCTGAAAGAGAAAGTCCAAAAGGACAATATCGGCTAGTGGTAGGCTTGGGCTGTTACAAATGGTATCAGAGCAAGACACCGAGCGATATACTCGGGAGGAGGCTGAGCACCGAAGAGAGGTGGATACAAGGCAGTGTGCCAGCAAGAACGCTGGGCCCCGAGGGGGTCCCACATTGGTTGGGGAGGAGAACGATACATTTTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGATTCGTTTTAAAGTCCTTGAGGGGAAGCCTGAGCTTGGGCTATTACACCTACTTCTAGGATAGCATTAGTGTGCATGCTTGAGCTTTGAATGTTTAATTTTTTATCAATTGGCTTATTAAAGTATTCCTTAAAGACAGGTTGCATCGTTGCTATTTGCTTGAAATAATTCCCGATTGCTTCTTTTATCGAAACTTGATTTTCTTTTATTATGTTTAATATGTATATAGGGAGCTATGGTGCCATTCCGTGAGCTGGACTCAAAGATGCCAATAAGACAACTGTTTTCGAATTTGGTTTTTGTGGAATACCCTGTTATATATGTTTTTCTACCCTCTCAAACGCCTAACTTTGAAGTGCTTAAAACTGCAAATCCAGTGAGTCATAATCCGGAAGGTAAAAACACTGGAAAAAATGATCTTGGCAGTCCTGAAGGCGTTCGCTTCAGGGTGGAAGAAATTGAAGACGATGACAATTCCTTCAATACTCAGGTGCTTGATCTGATGAAAGCATCAAATTCAAGCCCATACTGTGAAGTTGAGCCCCAAAATGTGCTTGGTGCAACACATAATTACTCTACAGATTTGATGGGGAAGCATGAAGTTGGGAATAGCCCCAATTCAAGCTCCCAGGCTAAGGAGCTAGGAGTTCTTAAAGAATTGGAGTTCGATTTCGAGCAAGATCTAATGGATACATATTCAAATATCATGGCACAGATCAATCCAGACGATTTTCTCGACTGGGACGAAGACTTCTCCAAGGGAGTAGAAATGGAAGGAAGTGGTGACCTTCTTGGGGACGTGTTCACAGTGGATGAATTGGAGGAAGGAGAGATTATGGAATAGTGAATTGGGATATTCTCCTTTTGGTTGCATGCAGGTAAATCTTGAACCATTTTACTTGGTTGATTTGGCAATCTCAGCAAGCAACGCCTTGCATTTTGGCCCATGTTTAGATTAGGACATGCTGGAGCTTGGCCTTGCTGCTGTTTACAATTTTTGCTAATCTTTATTTGATTTATTACATCAATGAGTTTGTATGATAACAAGTATCTCATGGAATTTTATACATTCATCCGTTCCGTTTTGTTTAACTAGGATTTTGTTTCAAAATTACTCTTAAGCGTAAAATATAATATTAGAATATTGGTTCGAAGGTTCATATGATGGTGACAACTTAAAATGGCTTTGCACGGAATGAAATGCTTGG

mRNA sequence

AATTACGAAACCTAGTCGTCGTCGCCGGCGAAATTCGGAACCGGCGCCCTCTCTAGTGTCTACGATGGCTGAAGGAGATACAGTAGTAACAGCGGCAGCCGCAGCAGCTTCCACGAGCTTCAACCGCGAAGGATCATCTCTTTGCGAAGAGTGTAATTCGAACCCGTCGAAGTACAAGTGCCCCGCTTGCTCTTTGCGTTCTTGTAGTCTTGATTGCGTCAATGGCCACAAGCGGCGCAGTGGCTGTACTGGAAAAAGGAAGCAGACTCAATTCGTCCCGATTTCTCAGTTCAACGATAGTGTCCTTCTTTCCGATTATAATTTGCTTGAGGAAGTGAAGAGGATGGCTGAATCTGCTCAAAGACTTAGAAAGAAATTGTGTCCCTATACTCATCCTTATTATAGGCTACCATTTCACCTTAAAAGTTTGCGCACTGCTGCTTCAAGCCGGAGAACAAAAATAATGTTTCTCCCCACTGGAATGACAAAAAGGGAGAAAAATCAAACTCGATATGATAAGAGGGAAAAAACAATCTTCTGGACAATCGAGTGGCGGTTAAACTCTACAGATGTTGTTTTAGTTGACCACGGAGTTAATGAAAACACAAATCTGTCTACCGTTCTTGAAAACCATCTACAACCAAGCCCATGGAAGAATCAAATTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACATACCCCAAGGGAGCTATGGTGCCATTCCGTGAGCTGGACTCAAAGATGCCAATAAGACAACTGTTTTCGAATTTGGTTTTTGTGGAATACCCTGTTATATATGTTTTTCTACCCTCTCAAACGCCTAACTTTGAAGTGCTTAAAACTGCAAATCCAGTGAGTCATAATCCGGAAGGTAAAAACACTGGAAAAAATGATCTTGGCAGTCCTGAAGGCGTTCGCTTCAGGGTGGAAGAAATTGAAGACGATGACAATTCCTTCAATACTCAGGTGCTTGATCTGATGAAAGCATCAAATTCAAGCCCATACTGTGAAGTTGAGCCCCAAAATGTGCTTGGTGCAACACATAATTACTCTACAGATTTGATGGGGAAGCATGAAGTTGGGAATAGCCCCAATTCAAGCTCCCAGGCTAAGGAGCTAGGAGTTCTTAAAGAATTGGAGTTCGATTTCGAGCAAGATCTAATGGATACATATTCAAATATCATGGCACAGATCAATCCAGACGATTTTCTCGACTGGGACGAAGACTTCTCCAAGGGAGTAGAAATGGAAGGAAGTGGTGACCTTCTTGGGGACGTGTTCACAGTGGATGAATTGGAGGAAGGAGAGATTATGGAATAGTGAATTGGGATATTCTCCTTTTGGTTGCATGCAGGTAAATCTTGAACCATTTTACTTGGTTGATTTGGCAATCTCAGCAAGCAACGCCTTGCATTTTGGCCCATGTTTAGATTAGGACATGCTGGAGCTTGGCCTTGCTGCTGTTTACAATTTTTGCTAATCTTTATTTGATTTATTACATCAATGAGTTTGTATGATAACAAGTATCTCATGGAATTTTATACATTCATCCGTTCCGTTTTGTTTAACTAGGATTTTGTTTCAAAATTACTCTTAAGCGTAAAATATAATATTAGAATATTGGTTCGAAGGTTCATATGATGGTGACAACTTAAAATGGCTTTGCACGGAATGAAATGCTTGG

Coding sequence (CDS)

ATGGCTGAAGGAGATACAGTAGTAACAGCGGCAGCCGCAGCAGCTTCCACGAGCTTCAACCGCGAAGGATCATCTCTTTGCGAAGAGTGTAATTCGAACCCGTCGAAGTACAAGTGCCCCGCTTGCTCTTTGCGTTCTTGTAGTCTTGATTGCGTCAATGGCCACAAGCGGCGCAGTGGCTGTACTGGAAAAAGGAAGCAGACTCAATTCGTCCCGATTTCTCAGTTCAACGATAGTGTCCTTCTTTCCGATTATAATTTGCTTGAGGAAGTGAAGAGGATGGCTGAATCTGCTCAAAGACTTAGAAAGAAATTGTGTCCCTATACTCATCCTTATTATAGGCTACCATTTCACCTTAAAAGTTTGCGCACTGCTGCTTCAAGCCGGAGAACAAAAATAATGTTTCTCCCCACTGGAATGACAAAAAGGGAGAAAAATCAAACTCGATATGATAAGAGGGAAAAAACAATCTTCTGGACAATCGAGTGGCGGTTAAACTCTACAGATGTTGTTTTAGTTGACCACGGAGTTAATGAAAACACAAATCTGTCTACCGTTCTTGAAAACCATCTACAACCAAGCCCATGGAAGAATCAAATTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACATACCCCAAGGGAGCTATGGTGCCATTCCGTGAGCTGGACTCAAAGATGCCAATAAGACAACTGTTTTCGAATTTGGTTTTTGTGGAATACCCTGTTATATATGTTTTTCTACCCTCTCAAACGCCTAACTTTGAAGTGCTTAAAACTGCAAATCCAGTGAGTCATAATCCGGAAGGTAAAAACACTGGAAAAAATGATCTTGGCAGTCCTGAAGGCGTTCGCTTCAGGGTGGAAGAAATTGAAGACGATGACAATTCCTTCAATACTCAGGTGCTTGATCTGATGAAAGCATCAAATTCAAGCCCATACTGTGAAGTTGAGCCCCAAAATGTGCTTGGTGCAACACATAATTACTCTACAGATTTGATGGGGAAGCATGAAGTTGGGAATAGCCCCAATTCAAGCTCCCAGGCTAAGGAGCTAGGAGTTCTTAAAGAATTGGAGTTCGATTTCGAGCAAGATCTAATGGATACATATTCAAATATCATGGCACAGATCAATCCAGACGATTTTCTCGACTGGGACGAAGACTTCTCCAAGGGAGTAGAAATGGAAGGAAGTGGTGACCTTCTTGGGGACGTGTTCACAGTGGATGAATTGGAGGAAGGAGAGATTATGGAATAG

Protein sequence

MAEGDTVVTAAAAAASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMKASNSSPYCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMDTYSNIMAQINPDDFLDWDEDFSKGVEMEGSGDLLGDVFTVDELEEGEIME

Homology

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BLAST of CmaCh08G005530 vs. Swiss-Prot
Match: BCD1_PONAB (Box C/D snoRNA protein 1 OS=Pongo abelii GN=ZNHIT6 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-25
Identity = 66/245 (26.94%), Postives = 121/245 (49.39%), Query Frame = 1


Query: 25  SLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSD 84
           S CE C +  +KY+CP C   SCSL CV  HK    C G R +T ++ I QF +  LLSD
Sbjct: 213 SRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSD 272

Query: 85  YNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKRE 144
           Y  LE+V R A+   R      P ++       H+  ++  A  +   +  LP G TKR+
Sbjct: 273 YRFLEDVARTADHISRDAFLKRPISNK------HMYFMKNRARRQGINLKLLPNGFTKRK 332

Query: 145 KNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSP----WKNQI 204
           +N T +DK+++   W ++ +   +    ++  V ++  ++ +L+ ++ P       + ++
Sbjct: 333 ENSTFFDKKKQQFCWHVKLQFPQSQAEYIEKRVPDDKTINEILKPYIDPEKSDPVIRQRL 392

Query: 205 QKFCEQLDSLKFFVR-TYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPN 264
           + +      ++  ++  Y +  +V + ELD    +     N V +EYP ++V L     +
Sbjct: 393 KAYIRSQTGVQILMKIEYMQQNLVRYYELDPYKSLLDNLRNKVIIEYPTLHVVLKGSNND 451

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BLAST of CmaCh08G005530 vs. Swiss-Prot
Match: BCD1_HUMAN (Box C/D snoRNA protein 1 OS=Homo sapiens GN=ZNHIT6 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-24
Identity = 66/244 (27.05%), Postives = 120/244 (49.18%), Query Frame = 1


Query: 25  SLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSD 84
           S CE C +  +KY+CP C   SCSL CV  HK    C G R +T ++ I QF +  LLSD
Sbjct: 218 SRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSD 277

Query: 85  YNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKRE 144
           Y  LE+V R A+   R      P ++ Y      +  ++  A  +   +  LP G TKR+
Sbjct: 278 YRFLEDVARTADHISRDAFLKRPISNKY------MYFMKNRARRQGINLKLLPNGFTKRK 337

Query: 145 KNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSP----WKNQI 204
           +N T +DK+++   W ++ +   +    ++  V ++  ++ +L+ ++ P       + ++
Sbjct: 338 ENSTFFDKKKQQFCWHVKLQFPQSQAEYIEKRVPDDKTINEILKPYIDPEKSDPVIRQRL 397

Query: 205 QKFCEQLDSLKFFVR-TYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPN 264
           + +      ++  ++  Y +  +V + ELD    +     N V +EYP ++V L     +
Sbjct: 398 KAYIRSQTGVQILMKIEYMQQNLVRYYELDPYKSLLDNLRNKVIIEYPTLHVVLKGSNND 455

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BLAST of CmaCh08G005530 vs. Swiss-Prot
Match: BCD1_MOUSE (Box C/D snoRNA protein 1 OS=Mus musculus GN=Znhit6 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-22
Identity = 64/245 (26.12%), Postives = 120/245 (48.98%), Query Frame = 1


Query: 25  SLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSD 84
           S CE C +  +KY+CP C   SCSL CV  HK    C+G R +T +V + QF +  LLSD
Sbjct: 209 SRCETCGTEEAKYRCPRCMRFSCSLPCVKKHKADLTCSGVRDKTAYVSLQQFTEMNLLSD 268

Query: 85  YNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKRE 144
           Y  LE+V R A+   R      P    Y      L  ++  A  +   +  LP G +KR+
Sbjct: 269 YRFLEDVARTADKVSRDTFLKRPKRKKY------LFFMKNRARKQGIYLRLLPNGFSKRK 328

Query: 145 KNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSP----WKNQI 204
           +N T +D R++   W ++ +   +    ++  V ++  ++ +L+ ++ P       + ++
Sbjct: 329 ENSTVFDHRKQQFCWHVKLQFPQSQAEYIEKRVPDDKTINEILKPYIDPEESDPVIRQRL 388

Query: 205 QKFCEQLDSLKFFVRT-YPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPN 264
           + + +    ++  +R    +  M+ + ELD    +     + V +EYP ++V L   + +
Sbjct: 389 KAYAQSQTGVQILMRVENMQQNMIRYHELDPYKSLSDNLKDKVIIEYPTLHVVLRGSSND 447

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BLAST of CmaCh08G005530 vs. Swiss-Prot
Match: BCD1_SCHPO (Putative box C/D snoRNA protein SPCC613.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC613.07 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-16
Identity = 73/255 (28.63%), Postives = 114/255 (44.71%), Query Frame = 1


Query: 18  SFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFN 77
           S NR G  +C  C  N SKY+CP C  R C L+C   HKR + C+G+R    FVP S+  
Sbjct: 2   SENRLG--ICSTCQKNASKYRCPRCDSRFCCLECNLEHKRLTKCSGERDPATFVPKSKLV 61

Query: 78  DSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLP 137
           +  L SD+N L  V+R+    +    ++        R   +   L+ +       I F P
Sbjct: 62  NH-LNSDFNFLSGVERLINRKENGSHQVS------NRAERNRLQLKRSLERAGINIKFAP 121

Query: 138 TGMTKREKNQTRYDKREKTIFWTIEWRL--NSTDVVLVDHGVNENTNLSTVLENHLQPSP 197
               KR  N+T YDK+   I W+IEW L  +ST   L D   +ENT    +  +H +  P
Sbjct: 122 PSNKKRRLNRTHYDKKSHLIKWSIEWCLHESSTSKDLTDE-ASENT---IITHSHPESEP 181

Query: 198 WKNQIQKFCEQ---------------LDSLKFFV---RTYPKGAMVPFRELDSKMPIRQL 253
            +   +K  E+                D ++F +   ++  KG +  +++++    +   
Sbjct: 182 LEKIFRKLVEENSEMNSQVSKANIHAPDDMQFMIKSRKSRSKGFI--YKKIEPSNSLSSC 241

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BLAST of CmaCh08G005530 vs. TrEMBL
Match: A0A0A0K6N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429490 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.1e-193
Identity = 343/423 (81.09%), Postives = 372/423 (87.94%), Query Frame = 1


Query: 1   MAEGDTVVTAAAAAASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSG 60
           MAE D  V     A STS N++GSSLCEEC SNPSKYKCPACS+RSCSL+CVN HKRRSG
Sbjct: 1   MAEVDATV-----AVSTSSNQQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSG 60

Query: 61  CTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLK 120
           CTGKRKQTQFVP+SQFNDS+LLSDYNLLEEVKRMAESAQRLRKKLCPYTH Y+RLPFHLK
Sbjct: 61  CTGKRKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLK 120

Query: 121 SLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNEN 180
           SLR AAS+RRTKIMFLPTGMTKRE NQTRYDKREKTIFWT+EWR NSTD+VLVDH VNEN
Sbjct: 121 SLRAAASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNEN 180

Query: 181 TNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSN 240
           + LST+LENHL+P PWK Q+QKF EQLD LKFFVRTYPKGA   F ELDS +PIRQLFSN
Sbjct: 181 SKLSTILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSN 240

Query: 241 LVFVEYPVIYVFLPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDD 300
           L FVEYPVIYV LPSQTPNFEV+KTANPVS N EG N  KNDL S EGV FRVEEIE+D+
Sbjct: 241 LAFVEYPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDE 300

Query: 301 NSFNTQVLDLMKASNSSPYCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVL 360
           NS N QVLDLMK S SSP+C+V P+N+ GATH+YST L+GK EVGNSP SSSQA+E GV+
Sbjct: 301 NSCNPQVLDLMKVSTSSPHCKVSPRNLHGATHSYSTGLVGKQEVGNSPKSSSQAREPGVV 360

Query: 361 KELEFDFEQDLMDTYSNIMAQINPDDFLDWDEDFSKGVEMEGSGDLLGDVFTVDELEEGE 420
           KELEFDFEQDL+D YSNIMAQINPDDFLDWD DFSK VEMEGSG+LLGD FTV+ELEEGE
Sbjct: 361 KELEFDFEQDLIDAYSNIMAQINPDDFLDWDGDFSKEVEMEGSGELLGDAFTVEELEEGE 418

Query: 421 IME 424
           IME
Sbjct: 421 IME 418

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BLAST of CmaCh08G005530 vs. TrEMBL
Match: A0A0D2QZF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G174800 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.3e-118
Identity = 222/406 (54.68%), Postives = 299/406 (73.65%), Query Frame = 1


Query: 27  CEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSDYN 86
           CEEC    SKYKCP C LR+CSL CVN HK+R+GCTGKR  T FVP+S+F+D++LLSDYN
Sbjct: 9   CEECKKKASKYKCPGCCLRTCSLPCVNAHKQRTGCTGKRNITSFVPLSRFDDNLLLSDYN 68

Query: 87  LLEEVKRMAESAQRLRKKLCPYT----HPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTK 146
           LLEE KR+AESA R+R KL   T    HP+++LP  L++LRTAA+SRRTK++FLP+GM+K
Sbjct: 69  LLEETKRVAESATRIRSKLFNTTNGGYHPHFKLPHPLRNLRTAAASRRTKLLFLPSGMSK 128

Query: 147 REKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQIQK 206
           RE NQTR++ R+K I WTIEWR +STDVVL+DHG++E+T+L +++ENHLQP PW + ++K
Sbjct: 129 RETNQTRFNHRKKYISWTIEWRFHSTDVVLLDHGIHEDTSLCSLIENHLQPGPWNHPLRK 188

Query: 207 FC-EQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPNFE 266
           FC EQLDSLKFF+R YPKG+  PFRELD K P+R+L +++V +EYPVI+VFLPS+  +FE
Sbjct: 189 FCEEQLDSLKFFIRKYPKGSKSPFRELDIKTPLRKLLADMVVLEYPVIHVFLPSEHCDFE 248

Query: 267 VLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMKASNSSPYCE 326
           V++  + V++  EGK++   D   P+GV F+ EEIED+ +S   QV DLMK   SSP  +
Sbjct: 249 VIRENHLVTNGQEGKDSSGADNEIPKGVTFKEEEIEDNGSSLEPQVFDLMKHVLSSPMHQ 308

Query: 327 VEPQNVLGATH--NYSTDLMGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMDTYSNIM 386
           +  QN        N    L  +   GN  +SS QAK+ G+  ++EFDF+Q L+D YS+++
Sbjct: 309 IPSQNKSEKAFGGNSVLSLSARAGAGNRVHSSPQAKDSGLFDDMEFDFDQGLIDAYSDLI 368

Query: 387 AQINPDDFLDWDEDFSKGVEMEGSGDLLGD--VFTVDELEEGEIME 424
           A+INPDDFLD + +F+K  E E   DL     VF  +ELEEGEI++
Sbjct: 369 AEINPDDFLDLEGEFAKQPETEDRTDLSNSRGVFFAEELEEGEILD 414

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BLAST of CmaCh08G005530 vs. TrEMBL
Match: V4TKX9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031642mg PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.3e-118
Identity = 223/406 (54.93%), Postives = 302/406 (74.38%), Query Frame = 1


Query: 24  SSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLS 83
           +++C+EC    SKYKCP CS+R+CSL CV  HK+R+GC+G R  TQFVP+SQFND++LLS
Sbjct: 19  AAICQECKYKVSKYKCPGCSIRTCSLACVKAHKQRTGCSGNRNVTQFVPLSQFNDNILLS 78

Query: 84  DYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKR 143
           DYNLLEE+KR++ESA+RLR KLC Y+  Y++LP +L+SLR+AA+SR+TK++FLP+GMTKR
Sbjct: 79  DYNLLEEMKRVSESARRLRGKLCGYS--YFKLPNYLRSLRSAAASRKTKLLFLPSGMTKR 138

Query: 144 EKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQIQKF 203
           EKNQ+RYD+R K I WTIEWR +STDVVL DHGV E+ +L +V+ENHL+P PW +Q+++F
Sbjct: 139 EKNQSRYDQRRKFISWTIEWRFHSTDVVLFDHGVAEDRSLCSVIENHLKPGPWSHQLRQF 198

Query: 204 CE-QLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPNFEV 263
           CE QLD +KFF+  +PKG   PF+ELD K PIRQ  SN+V +EYPVI+VFLPS + +FE+
Sbjct: 199 CEEQLDQIKFFICKFPKGPKSPFKELDIKAPIRQQLSNVVILEYPVIHVFLPSPSYDFEI 258

Query: 264 LKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMKASNSSPYCEV 323
           +K + PV H    K+   ND  SP+GV FR EEIE+D ++ +  V DLMK  N++P  ++
Sbjct: 259 VKDS-PVPHKCLLKDPVSNDRESPKGVPFREEEIEEDISTSDPMVFDLMKNPNTNPVSQM 318

Query: 324 EPQNVLGA--THNYSTDLMGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMDTYSNIMA 383
             +N +    ++N  T L+ K    NS  SS + +E GV KE++FDF+Q L+D YS+I+A
Sbjct: 319 PNENGISRKFSNNLDTPLLSKVGADNSSESSLKTEEQGVFKEIDFDFDQGLIDVYSDIIA 378

Query: 384 QINPDDFLDWDEDFSKG---VEMEGSGDLLGDVFTVDELEEGEIME 424
           +INPDDFLD D  F+K     E+E   +  GD    +ELEEGEI E
Sbjct: 379 EINPDDFLDLDGIFAKEENVEEIEALRNSRGDYLAKEELEEGEIAE 421

[Close]

BLAST of CmaCh08G005530 vs. TrEMBL
Match: M5X6V1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006367mg PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 9.6e-118
Identity = 235/420 (55.95%), Postives = 295/420 (70.24%), Query Frame = 1


Query: 14  AASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPI 73
           A S   N   + +CEEC +NPSKYKCP CS+RSCSL CV  HK R+GCTGKR QT FVP+
Sbjct: 7   AGSAKPNPTVAQICEECKANPSKYKCPGCSIRSCSLPCVKAHKLRTGCTGKRNQTNFVPL 66

Query: 74  SQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKI 133
           SQ +++ LLSDYNLLEEVKR++ESAQRLR KLC Y   YYRLP HLKSLR AASSRRTK+
Sbjct: 67  SQIDNNQLLSDYNLLEEVKRVSESAQRLRNKLCRYN--YYRLPDHLKSLRGAASSRRTKL 126

Query: 134 MFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQP 193
           +FLP+GM+KREKNQTRYD+R+K I WTIEWR +STDVVL DH VNENT   +++ENHL+P
Sbjct: 127 LFLPSGMSKREKNQTRYDRRKKCISWTIEWRFHSTDVVLTDHEVNENTKFCSIIENHLKP 186

Query: 194 SPWKNQIQKFC-EQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVF 253
            PW +Q++ FC EQLD L+ F+R YPKGA  P  ELD ++PIRQ  +NLV +EYPVIYVF
Sbjct: 187 GPWNHQLRLFCEEQLDCLRLFIRKYPKGARSPLCELDIRVPIRQQLTNLVILEYPVIYVF 246

Query: 254 LPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMK 313
           LPSQ+ +F V+K A P    PE K  G+ND  S  GV F+ EEIE +DNS+  +V DLMK
Sbjct: 247 LPSQSLDFGVVKNATPSFCKPELKTYGRND-PSAGGVPFKEEEIE-EDNSY-PKVFDLMK 306

Query: 314 ASNSSPY--------CEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVLKELE 373
              SS          CE  P + L  T      L       N  +S S AKE G+ ++++
Sbjct: 307 RETSSSLPLISSRSRCEKAPDDSLTKT------LPATVATDNDSHSDSNAKEQGLFEDMD 366

Query: 374 FDFEQDLMDTYSNIMAQINPDDFLDWDEDFSK-GVEMEGSGDLLGDVFTVDELEEGEIME 424
           FDF+Q L+DTYSN++A+INPDDFLD + + +K  +E      +   +   D++EEGEI+E
Sbjct: 367 FDFDQGLIDTYSNLIAEINPDDFLDLEGELTKEELEERNLSSVRKFLLADDDIEEGEILE 415

[Close]

BLAST of CmaCh08G005530 vs. TrEMBL
Match: A0A061DVF2_THECC (HIT-type Zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005940 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.1e-117
Identity = 220/402 (54.73%), Postives = 293/402 (72.89%), Query Frame = 1


Query: 26  LCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSDY 85
           +CEEC +  SKYKCP C LR+CSL C+N HK R+GC G+R  T+FVP+SQF+D++LLSDY
Sbjct: 14  VCEECKNKASKYKCPGCYLRTCSLPCINAHKHRTGCNGRRNNTRFVPLSQFDDNLLLSDY 73

Query: 86  NLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKREK 145
           NLLEE KR+AESA+R R KLC    P+++LPF L++LR AA+SRRTK++FLP GM+KRE 
Sbjct: 74  NLLEETKRVAESARRTRSKLCSNYFPHFKLPFVLRTLRAAAASRRTKLLFLPAGMSKRET 133

Query: 146 NQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQIQKFC- 205
           NQTR+ +R+K I WTIEWR +STDVVL DHGV+E+T L +V+ENHL+P PW + ++ FC 
Sbjct: 134 NQTRFHQRKKFISWTIEWRFHSTDVVLFDHGVHEDTTLCSVIENHLKPGPWNHPLRPFCQ 193

Query: 206 EQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPNFEVLK 265
           EQLD LKFF+R YPKG   PF+ELD K PIRQ  ++ V +EYPVI+VFLPS+   FEV++
Sbjct: 194 EQLDCLKFFIRKYPKGPKSPFQELDMKAPIRQQLADTVILEYPVIHVFLPSEHYEFEVVR 253

Query: 266 TANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMKASNSSPYCEVEP 325
             + V+H PE K++G  D    +GV F+ E+IE+DD+S + QV DLMK   SSP  ++  
Sbjct: 254 ENHSVTHRPEVKDSGSADNEIQKGVTFKEEKIEEDDSSLDPQVFDLMKHVISSPMHQIPY 313

Query: 326 QNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMDTYSNIMAQINP 385
           +N              K   GN  +SSSQ K+ GV + +EFDF+QDL+D YS+++A+INP
Sbjct: 314 EN-----------KSEKAGAGNRVHSSSQTKDSGVFQGMEFDFDQDLIDAYSDLIAEINP 373

Query: 386 DDFLDWDEDFSKGVEMEGSGDL---LGDVFTVDELEEGEIME 424
           DDFLD + +F+K  E E   DL    GD F+ +ELEEGEI++
Sbjct: 374 DDFLDLEGEFAKQSETEHRRDLSNSRGDFFS-EELEEGEIVD 403

[Close]

BLAST of CmaCh08G005530 vs. TAIR10
Match: AT1G04945.3 (AT1G04945.3 HIT-type Zinc finger family protein)

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-104
Identity = 202/406 (49.75%), Postives = 277/406 (68.23%), Query Frame = 1


Query: 25  SLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDSVLLSD 84
           S+CEEC  NP KYKCP CS+RSC+L CV  HK+R+GCTGKRK T  VP+S+F+D++LLSD
Sbjct: 256 SVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLSD 315

Query: 85  YNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTGMTKRE 144
           YN+LEE KR+AESA R R +LC   H  Y+LP+ LKSL++AA SRRTK+ +LP+GM KRE
Sbjct: 316 YNMLEETKRVAESALRRRSQLCK-NHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLKRE 375

Query: 145 KNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQIQKFC 204
            NQ+RYD R K I WTIEWR +STDV+LVDHGV E+ NL +V++NHL+P PW ++++ FC
Sbjct: 376 NNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKPFC 435

Query: 205 E-QLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTPNFEVL 264
           +  LDSLK F+R YPKGA  PF+ELD K P+R+  + +V +EYPVI+V+LPSQ+  F+V+
Sbjct: 436 DVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFKVI 495

Query: 265 KTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDD-NSFNTQVLDLMKASNSSPYCEV 324
           K  N   +  +    G    G   G+ FR EEIE+DD +SF  +VL LMK  N +P   V
Sbjct: 496 KDFNTTPNPNDSLYDGH---GCTNGITFREEEIEEDDIDSFEPEVLGLMKQMNYNPCLRV 555

Query: 325 -EPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMDTYSNIMAQ 384
            E     G   N S   +   E  ++ N             +E +FEQ L+DTYS++ A+
Sbjct: 556 SEKSKAEGVGTNNSNPQVDTTEQEDAGN-------------MELEFEQGLIDTYSDLFAE 615

Query: 385 INPDDFLDWDEDFSKGVEMEGSGDL--LGDVFTVD--ELEEGEIME 424
           +NP D+ +++ +F+KG++ + + +L  L   F  D  +LEEGEI+E
Sbjct: 616 MNPGDYFNFECEFAKGLDSDDNCNLQNLDTDFIADGLDLEEGEIVE 644

[Close]

BLAST of CmaCh08G005530 vs. NCBI nr
Match: gi|700189930|gb|KGN45163.1| (hypothetical protein Csa_7G429490 [Cucumis sativus])

HSP 1 Score: 684.1 bits (1764), Expect = 1.5e-193
Identity = 343/423 (81.09%), Postives = 372/423 (87.94%), Query Frame = 1


Query: 1   MAEGDTVVTAAAAAASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSG 60
           MAE D  V     A STS N++GSSLCEEC SNPSKYKCPACS+RSCSL+CVN HKRRSG
Sbjct: 1   MAEVDATV-----AVSTSSNQQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSG 60

Query: 61  CTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLK 120
           CTGKRKQTQFVP+SQFNDS+LLSDYNLLEEVKRMAESAQRLRKKLCPYTH Y+RLPFHLK
Sbjct: 61  CTGKRKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLK 120

Query: 121 SLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNEN 180
           SLR AAS+RRTKIMFLPTGMTKRE NQTRYDKREKTIFWT+EWR NSTD+VLVDH VNEN
Sbjct: 121 SLRAAASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNEN 180

Query: 181 TNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSN 240
           + LST+LENHL+P PWK Q+QKF EQLD LKFFVRTYPKGA   F ELDS +PIRQLFSN
Sbjct: 181 SKLSTILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSN 240

Query: 241 LVFVEYPVIYVFLPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDD 300
           L FVEYPVIYV LPSQTPNFEV+KTANPVS N EG N  KNDL S EGV FRVEEIE+D+
Sbjct: 241 LAFVEYPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDE 300

Query: 301 NSFNTQVLDLMKASNSSPYCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVL 360
           NS N QVLDLMK S SSP+C+V P+N+ GATH+YST L+GK EVGNSP SSSQA+E GV+
Sbjct: 301 NSCNPQVLDLMKVSTSSPHCKVSPRNLHGATHSYSTGLVGKQEVGNSPKSSSQAREPGVV 360

Query: 361 KELEFDFEQDLMDTYSNIMAQINPDDFLDWDEDFSKGVEMEGSGDLLGDVFTVDELEEGE 420
           KELEFDFEQDL+D YSNIMAQINPDDFLDWD DFSK VEMEGSG+LLGD FTV+ELEEGE
Sbjct: 361 KELEFDFEQDLIDAYSNIMAQINPDDFLDWDGDFSKEVEMEGSGELLGDAFTVEELEEGE 418

Query: 421 IME 424
           IME
Sbjct: 421 IME 418

[Close]

BLAST of CmaCh08G005530 vs. NCBI nr
Match: gi|778728727|ref|XP_011659467.1| (PREDICTED: box C/D snoRNA protein 1-like [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 8.2e-187
Identity = 336/423 (79.43%), Postives = 363/423 (85.82%), Query Frame = 1


Query: 1   MAEGDTVVTAAAAAASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSG 60
           MAE D  V     A STS N++GSSLCEEC SNPSKYKCPACS+RSCSL+CVN HKRRSG
Sbjct: 1   MAEVDATV-----AVSTSSNQQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSG 60

Query: 61  CTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLK 120
           CTGKRKQTQFVP+SQFNDS+LLSDYNLLEEVKRMAESAQRLRKKLCPYTH Y+RLPFHLK
Sbjct: 61  CTGKRKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLK 120

Query: 121 SLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNEN 180
           SLR AAS+RRTKIMFLPTGMTKRE NQTRYDKREKTIFWT+EWR NSTD+VLVDH VNEN
Sbjct: 121 SLRAAASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNEN 180

Query: 181 TNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSN 240
           + LST+LENHL+P PWK Q+QKF EQLD LKFFVRTYPKGA   F ELDS +PIRQLFSN
Sbjct: 181 SKLSTILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSN 240

Query: 241 LVFVEYPVIYVFLPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDD 300
           L FVEYPVIYV LPSQTPNFEV+KTANPVS N EG N  KNDL S EGV FRVEEIE+D+
Sbjct: 241 LAFVEYPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDE 300

Query: 301 NSFNTQVLDLMKASNSSPYCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVL 360
           NS N QVLDLMK S SSP+C+V P+N           L+GK EVGNSP SSSQA+E GV+
Sbjct: 301 NSCNPQVLDLMKVSTSSPHCKVSPRN-----------LVGKQEVGNSPKSSSQAREPGVV 360

Query: 361 KELEFDFEQDLMDTYSNIMAQINPDDFLDWDEDFSKGVEMEGSGDLLGDVFTVDELEEGE 420
           KELEFDFEQDL+D YSNIMAQINPDDFLDWD DFSK VEMEGSG+LLGD FTV+ELEEGE
Sbjct: 361 KELEFDFEQDLIDAYSNIMAQINPDDFLDWDGDFSKEVEMEGSGELLGDAFTVEELEEGE 407

Query: 421 IME 424
           IME
Sbjct: 421 IME 407

[Close]

BLAST of CmaCh08G005530 vs. NCBI nr
Match: gi|659122645|ref|XP_008461252.1| (PREDICTED: box C/D snoRNA protein 1-like [Cucumis melo])

HSP 1 Score: 652.9 bits (1683), Expect = 3.8e-184
Identity = 331/423 (78.25%), Postives = 359/423 (84.87%), Query Frame = 1


Query: 1   MAEGDTVVTAAAAAASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSG 60
           MAE D     A  A STS N +GSSLCEEC SNPSKYKCPACS+RSCSL+CVN HKRRSG
Sbjct: 1   MAEED-----ATMAVSTSSNHQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSG 60

Query: 61  CTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLK 120
           CTGKRKQTQFVP+SQFNDS+LLSDYNLLEEVKRMAESAQRLRKKLCPYTH Y+RLPFHLK
Sbjct: 61  CTGKRKQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLK 120

Query: 121 SLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNEN 180
           SLR AAS+RRTKIMFLPTGMTKRE NQTRYDKREKTIFWT+EWR NST++VLVDH VNEN
Sbjct: 121 SLRAAASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTNIVLVDHEVNEN 180

Query: 181 TNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSN 240
           + LST+L NHL+PSPWK Q+QKF EQLD LK FVRTYPKGA  PF ELDS +PIRQLFSN
Sbjct: 181 SKLSTILANHLRPSPWKTQLQKFREQLDCLKVFVRTYPKGAKSPFHELDSTLPIRQLFSN 240

Query: 241 LVFVEYPVIYVFLPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDD 300
           L FVEYPVIYV LP QTPNFEV+KTANP S N EG N  +NDL S  GV FRVEEIEDD+
Sbjct: 241 LAFVEYPVIYVVLPFQTPNFEVVKTANPASRNLEGSNALENDLASHVGVCFRVEEIEDDE 300

Query: 301 NSFNTQVLDLMKASNSSPYCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVL 360
           NS N QVLDLMK S SSP+C+V P+N           L+GK EVGNSP SSSQA+ELGV+
Sbjct: 301 NSCNPQVLDLMKVSTSSPHCKVSPRN-----------LVGKQEVGNSPKSSSQARELGVV 360

Query: 361 KELEFDFEQDLMDTYSNIMAQINPDDFLDWDEDFSKGVEMEGSGDLLGDVFTVDELEEGE 420
           KELEFDFEQDL+D YSNIMAQINPDDFLDW+ DFSK VEMEGSG+LLGD FT +ELEEGE
Sbjct: 361 KELEFDFEQDLIDAYSNIMAQINPDDFLDWEGDFSKEVEMEGSGELLGDAFTAEELEEGE 407

Query: 421 IME 424
           IME
Sbjct: 421 IME 407

[Close]

BLAST of CmaCh08G005530 vs. NCBI nr
Match: gi|1009106123|ref|XP_015870748.1| (PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba])

HSP 1 Score: 464.2 bits (1193), Expect = 2.5e-127
Identity = 237/413 (57.38%), Postives = 308/413 (74.58%), Query Frame = 1


Query: 20  NREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDS 79
           N + S+ CEEC SNPSKYKCP CS+RSCSL CV  HK+R+GCTGKR QTQFVP+SQF+D 
Sbjct: 17  NPKESTFCEECKSNPSKYKCPGCSIRSCSLQCVKAHKQRTGCTGKRNQTQFVPLSQFDDK 76

Query: 80  VLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTG 139
            LLSDYN+LEEVKR+AESAQR+R  LC Y   Y+RLP+HL+SLR AASSRRTK++FLP+G
Sbjct: 77  QLLSDYNMLEEVKRVAESAQRMRYNLCRYN--YFRLPYHLRSLRNAASSRRTKLLFLPSG 136

Query: 140 MTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQ 199
           M+KREKNQTRYD+R+K+I+WTIEW+ +S DVVL+DHGVNEN NL + + NHL+P PW + 
Sbjct: 137 MSKREKNQTRYDQRKKSIYWTIEWQFHSADVVLLDHGVNENMNLCSAIGNHLKPGPWNHP 196

Query: 200 IQKFC-EQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTP 259
           ++KFC EQLD LKFF+R YPKG+  PF ELDS +PIRQ F+NLV +EYPVIYVFLPSQ+ 
Sbjct: 197 LRKFCEEQLDHLKFFIRKYPKGSKSPFYELDSTIPIRQQFANLVILEYPVIYVFLPSQSC 256

Query: 260 NFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMKASNSSP 319
           +FEV++ ANP+   P  +N+  ND  + EG  F+ EEIE D++S   +V D MK  N   
Sbjct: 257 DFEVIRDANPIIRKPHLRNSKSNDHLTKEGTAFKEEEIE-DNSSLEPKVFDFMKYGNPDS 316

Query: 320 YCEVEPQNVLGATHNYSTDL-----MGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMD 379
             +   Q   G++    ++L       K   GNSP SS + KE G+ +++EFDF+Q L+D
Sbjct: 317 LHQFPHQ---GSSEKLLSNLSDRASSAKEVAGNSPQSSLKTKEQGLFEDMEFDFDQGLID 376

Query: 380 TYSNIMAQINPDDFLDWDEDFSKGVEMEGSGD---LLGDVFTVDELEEGEIME 424
            YS++++QINPDDFLD + +FSK  E+EG  +   L+ D    ++LEEGEI+E
Sbjct: 377 VYSDLISQINPDDFLDLEGEFSKEEEVEGKKNPSYLMEDFPADNDLEEGEILE 423

[Close]

BLAST of CmaCh08G005530 vs. NCBI nr
Match: gi|1009106066|ref|XP_015868093.1| (PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba])

HSP 1 Score: 461.1 bits (1185), Expect = 2.1e-126
Identity = 236/413 (57.14%), Postives = 307/413 (74.33%), Query Frame = 1


Query: 20  NREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSGCTGKRKQTQFVPISQFNDS 79
           N + S+ CEEC SNPSKYKCP CS+RSCSL CV  HK+R+GCTGKR QTQFVP+SQF+D 
Sbjct: 17  NPKESTFCEECKSNPSKYKCPGCSIRSCSLQCVKAHKQRTGCTGKRNQTQFVPLSQFDDK 76

Query: 80  VLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLKSLRTAASSRRTKIMFLPTG 139
            LLSDYN+LEEVKR+AESAQR+R  LC Y   Y+RLP+HL+SLR AASSRRTK++FLP+G
Sbjct: 77  QLLSDYNMLEEVKRVAESAQRMRYNLCRYN--YFRLPYHLRSLRNAASSRRTKLLFLPSG 136

Query: 140 MTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNENTNLSTVLENHLQPSPWKNQ 199
           M+KREKNQTRYD+R+K+I+WTIEW+ +S DVVL+DHGVNEN NL + + NHL+P PW + 
Sbjct: 137 MSKREKNQTRYDQRKKSIYWTIEWQFHSADVVLLDHGVNENMNLCSAIGNHLKPGPWNHP 196

Query: 200 IQKFC-EQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSNLVFVEYPVIYVFLPSQTP 259
           ++KFC EQLD LKFF+  YPKG+  PF ELDS +PIRQ F+NLV +EYPVIYVFLPSQ+ 
Sbjct: 197 LRKFCEEQLDHLKFFICKYPKGSKSPFYELDSTIPIRQQFANLVILEYPVIYVFLPSQSC 256

Query: 260 NFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDDNSFNTQVLDLMKASNSSP 319
           +FEV++ ANP+   P  +N+  ND  + EG  F+ EEIE D++S   +V D MK  N   
Sbjct: 257 DFEVIRDANPIIRKPHLRNSKSNDHLTKEGTAFKEEEIE-DNSSLEPKVFDFMKYGNPDS 316

Query: 320 YCEVEPQNVLGATHNYSTDL-----MGKHEVGNSPNSSSQAKELGVLKELEFDFEQDLMD 379
             +   Q   G++    ++L       K   GNSP SS + KE G+ +++EFDF+Q L+D
Sbjct: 317 LHQFPHQ---GSSEKLLSNLSDRASSAKEVAGNSPQSSLKTKEQGLFEDMEFDFDQGLID 376

Query: 380 TYSNIMAQINPDDFLDWDEDFSKGVEMEGSGD---LLGDVFTVDELEEGEIME 424
            YS++++QINPDDFLD + +FSK  E+EG  +   L+ D    ++LEEGEI+E
Sbjct: 377 VYSDLISQINPDDFLDLEGEFSKEEEVEGKKNPSYLMEDFPADNDLEEGEILE 423

The following BLAST results are available for this feature:

BLAST of CmaCh08G005530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BCD1_PONAB	4.7e-25	26.94	Box C/D snoRNA protein 1 OS=Pongo abelii GN=ZNHIT6 PE=2 SV=1	[more]
BCD1_HUMAN	1.1e-24	27.05	Box C/D snoRNA protein 1 OS=Homo sapiens GN=ZNHIT6 PE=1 SV=1	[more]
BCD1_MOUSE	1.3e-22	26.12	Box C/D snoRNA protein 1 OS=Mus musculus GN=Znhit6 PE=1 SV=2	[more]
BCD1_SCHPO	1.4e-16	28.63	Putative box C/D snoRNA protein SPCC613.07 OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of CmaCh08G005530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6N1_CUCSA	1.1e-193	81.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429490 PE=4 SV=1	[more]
A0A0D2QZF8_GOSRA	3.3e-118	54.68	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G174800 PE=4 SV=1	[more]
V4TKX9_9ROSI	3.3e-118	54.93	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031642mg PE=4 SV=1	[more]
M5X6V1_PRUPE	9.6e-118	55.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006367mg PE=4 SV=1	[more]
A0A061DVF2_THECC	2.1e-117	54.73	HIT-type Zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TC...	[more]

BLAST of CmaCh08G005530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04945.3	7.1e-104	49.75	HIT-type Zinc finger family protein	[more]

BLAST of CmaCh08G005530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189930\|gb\|KGN45163.1\|	1.5e-193	81.09	hypothetical protein Csa_7G429490 [Cucumis sativus]	[more]
gi\|778728727\|ref\|XP_011659467.1\|	8.2e-187	79.43	PREDICTED: box C/D snoRNA protein 1-like [Cucumis sativus]	[more]
gi\|659122645\|ref\|XP_008461252.1\|	3.8e-184	78.25	PREDICTED: box C/D snoRNA protein 1-like [Cucumis melo]	[more]
gi\|1009106123\|ref\|XP_015870748.1\|	2.5e-127	57.38	PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba]	[more]
gi\|1009106066\|ref\|XP_015868093.1\|	2.1e-126	57.14	PREDICTED: box C/D snoRNA protein 1-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007529	Znf_HIT

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G005530.1	CmaCh08G005530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 25..52 score: 1.
IPR007529	Zinc finger, HIT-type	PROFILE	PS51083	ZF_HIT	coord: 27..61 score: 10
None	No IPR available	PANTHER	PTHR13483	UNCHARACTERIZED	coord: 24..318 score: 3.2E
None	No IPR available	PANTHER	PTHR13483:SF3	BOX C/D SNORNA PROTEIN 1	coord: 24..318 score: 3.2E
None	No IPR available	unknown	SSF144232	HIT/MYND zinc finger-like	coord: 24..62 score: 6.28

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G005530	Cucsa.050030	Cucumber (Gy14) v1	cgycmaB0052
CmaCh08G005530	Cla015273	Watermelon (97103) v1	cmawmB857
CmaCh08G005530	Csa7G429490	Cucumber (Chinese Long) v2	cmacuB914
CmaCh08G005530	MELO3C023518	Melon (DHL92) v3.5.1	cmameB824
CmaCh08G005530	ClCG09G003830	Watermelon (Charleston Gray)	cmawcgB787
CmaCh08G005530	CSPI07G19570	Wild cucumber (PI 183967)	cmacpiB934
CmaCh08G005530	CmoCh08G005450	Cucurbita moschata (Rifu)	cmacmoB913
CmaCh08G005530	CmoCh17G009050	Cucurbita moschata (Rifu)	cmacmoB896
CmaCh08G005530	Lsi02G026090	Bottle gourd (USVL1VR-Ls)	cmalsiB822
CmaCh08G005530	Cp4.1LG12g06940	Cucurbita pepo (Zucchini)	cmacpeB902
CmaCh08G005530	Cp4.1LG17g08250	Cucurbita pepo (Zucchini)	cmacpeB917
CmaCh08G005530	MELO3C023518.2	Melon (DHL92) v3.6.1	cmamedB922
CmaCh08G005530	CsaV3_7G031400	Cucumber (Chinese Long) v3	cmacucB1084
CmaCh08G005530	Cla97C09G166080	Watermelon (97103) v2	cmawmbB941
CmaCh08G005530	Bhi09G000493	Wax gourd	cmawgoB1128
CmaCh08G005530	CsGy7G017900	Cucumber (Gy14) v2	cgybcmaB973
CmaCh08G005530	Carg13467	Silver-seed gourd	carcmaB0628
CmaCh08G005530	Carg18699	Silver-seed gourd	carcmaB0499

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G005530	CmaCh17G009330	Cucurbita maxima (Rimu)	cmacmaB382

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G005530	Cucurbita pepo (Zucchini)	cmacpeB913
CmaCh08G005530	Bottle gourd (USVL1VR-Ls)	cmalsiB831
CmaCh08G005530	Bottle gourd (USVL1VR-Ls)	cmalsiB844
CmaCh08G005530	Cucumber (Gy14) v2	cgybcmaB144
CmaCh08G005530	Cucumber (Gy14) v2	cgybcmaB456
CmaCh08G005530	Silver-seed gourd	carcmaB0734
CmaCh08G005530	Silver-seed gourd	carcmaB1273
CmaCh08G005530	Cucumber (Chinese Long) v3	cmacucB1042
CmaCh08G005530	Watermelon (97103) v2	cmawmbB910
CmaCh08G005530	Watermelon (97103) v2	cmawmbB912
CmaCh08G005530	Wax gourd	cmawgoB1118
CmaCh08G005530	Cucurbita maxima (Rimu)	cmacmaB120
CmaCh08G005530	Cucurbita maxima (Rimu)	cmacmaB293
CmaCh08G005530	Cucurbita maxima (Rimu)	cmacmaB440
CmaCh08G005530	Cucurbita maxima (Rimu)	cmacmaB494
CmaCh08G005530	Cucurbita maxima (Rimu)	cmacmaB513
CmaCh08G005530	Cucurbita moschata (Rifu)	cmacmoB877
CmaCh08G005530	Cucurbita moschata (Rifu)	cmacmoB879
CmaCh08G005530	Cucurbita moschata (Rifu)	cmacmoB905
CmaCh08G005530	Cucurbita moschata (Rifu)	cmacmoB908
CmaCh08G005530	Wild cucumber (PI 183967)	cmacpiB904
CmaCh08G005530	Cucumber (Chinese Long) v2	cmacuB886
CmaCh08G005530	Melon (DHL92) v3.5.1	cmameB842
CmaCh08G005530	Watermelon (Charleston Gray)	cmawcgB792
CmaCh08G005530	Watermelon (97103) v1	cmawmB862