CmaCh17G005150 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G005150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RNA-binding KH domain-containing protein
Location	Cma_Chr17 : 3486580 .. 3495591 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCTATATGCTAGAGAACTAGCGCACTCGCCTTCCGACGCCCTTTGTTGGTTCTCTATGGTATCGTCAGCTATTATCATCATTTCTCTTCTGCATTCACGCCTTCGCACTCCCAGCCTGATACGGCCATCTTTCATAGCCCACTGACGTGAAGATTCCTCCAAATATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTGCCTGTTTCTATGCCCTTACCCGGGGCTCTCTTGGTTTCCGACTCCGGACATACCGTCACTGGGAAACGCCGCCGTGAGGACGACCTGATTGTATCCAATTCGGAGGCCGTAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCATTGTGCCCTCGAAGCAGATCGGGAAGGTTATCGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAAACCAAAGCTACAATCAAGATTGCCGATGCTGTCGCGGTATTGTTTTTGTATTTGATTTTGAGCGCTTTGGGTTAGGGTTTTCGTTTCGCTTTTCTTTTTTGTCACTCTTTTCCTTTGTTTGGCTATCGAGGAAGTACTAAGAACAAACTTCTTGTTCACTATGTTTAATTTCAGCGGCGATTTTTTTTTTTTTTTTTTTTTTTTTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTCTCTTTAACTCCTTTGCTGGTTGTGTTGCATGTCAAACGGTCGTTGTATTGGTGGTGACAATTTGTGCTTTGGATGATATTTCAGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACTGTGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCATATTGCAGCACTGATACTGAAGGTCATACATCGCCAACTGTTAACTGTGCCGTAGAGATGATATATTTATTTTCTTGTGTGATGTTGAGTCTCAATAATATTCTTCTGTTTTTGTTGTGGAAAGGCCAATTTCAAAGAAAATTAAGTTTTTTGTATGACTGGTTTCTTTAGGGAGGTTAAATACTGGACATTGTCCAAGAATCTTCATCCATGGTTTTGGATTCCTACTATAGTCATGCATATTGTGCAGGAAAGCGACAGAAAATTTGAACTAAAAAAAGAAAAAAGGAACTAAAAAAGAAAGTAACAAAGAATTGATTCTGAGGTCAGTCTACCATGAAACATCGAAATAGTTTCTGGGGTACATTTGGGATCGATTTATCTACAGTCAGAGTGTGCGTGGTAAGTTTTAGATGTTTTTTCCCCTTTAAGTTTTTAGTTTTTTAAATACAATGTTATTAGTTCTCTATAAATTGAGACTTTCAGCTTTGTGTTCACACGTCCTCATAATCAAATTTCATTTATTGAGTGACATTTCTGTTTGAGAGCATTAGACTACTCCACAGGTTGCATGGGTGAGGATATGCTGGAGGAAGTGCTTGTCCATGACTCTCCCTAGGGAGTCAGGTTCTTTGGCAATGGCTTTATTTTGTTTATTTATTTATTTTTCTATTTTATGGAATATTGGCCTCGATAGAAACAAGAATCTTGTTGGGATACATAAAAGTCTTAGAGGAGCTTTGGTGTGTGACAAGTTTAATGCCTCTCTCTGAGAATTTTTGTTTTAATGAGTGCTGCAATATGCTTTATTTTTTGTTCTCAACAATTAACGCAATCTCCTGTAATTTTTGCTTCATGTTTTGTTTTTGTTCGCTCTTCTGTTCAGAAGTTCATTTCTGTAGGCTATTCCTTTTGAACTTTTGTTTTCCTTAATACAAGCTACATTTTATATCTATAAAAAGAAAACATTTTCCTTATCTGCAATCTTTGGAAGTGAAACTTCATGAATTTTTCTTTGCTGTATTGACGTGTATAATGAGGTAGTAATGATGGAGGCTACTGGTGTTTTGTACTTCAGAAAATATTGTTATAGACAGCATTGGCAATTTAAAGTTTTCAATCAAAGGTTACATATCCGTTTCTTATTTAACAAAAAAAATGTTCAATCAAAGGCTGGCATCTCTAGTACACATTTGTCTGCCTTAGAAATTCTGTTCTTTTTCCATATCACGAAGTTAAATATATAGATGAATATAAAAAGACAACACTAGAAATTATTGATTTTAAAGGTAGGGTAAATAACAACACGTTCATAATGTGTTTTTCCCCCTTTTGTAAGTAACTATGTGCAATTGTACTAAGCTTGAATGTGCTCTTTGACAAATCAAACTACCCCTCTAACATCTGATGTTAGGAATTGTAGATATTCGATAACTTAGATAGGCAGCCATCGCATCACTATTTTAGCCAGCAAGTGTGGATTGCGCTCTTTTCCTGCATGACATGTCCATACTTGATCAATTACATTAGTCTCCTTCTAGCCAGCAAGTGTGGATTGCGCTCTTTTCCTGAATGACATGTCCATACTTGATCAATTACATTAGTCTCCTTCTAGCCAGCAAGTGTGGATTGCGCTCTTTTCCTGAATGACCTGTCCATACTTGATCAATTACATTAGTCTCCTTCTTGAAGTACCGATGTTCATGTGATAGAATGATAGCTCCTCTTATTTATTTTAGATCATTTTTGAGAATCTTATATCTGCTACATCTTTTATAATTATTTATTTTTTTAATTATACTTTCAAGTCATATTTTTACAGGAGGATGGCACCACCAGTATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCTAATACTATTAGGCTCCTAATAGCAGGATCTCAAGCAGGGTCTTTGATTGGTGCCTCGGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCAACAATTACGATTCTCGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACAGAGTGGTGCAAGTGAGTTTTTCCACATTGTCAGAATTTGAAACCTAGTGCATCATTCTTTCTGCCTTTCGATCGTGCTCATCACTTTTTGTTTCTGCGAGTAGTGTACTTTGCAATTAATGAGGTGAAAATGATCTTTTGGTTCTACTTTTCTAACTTTTGTTAAATGTTCACCAACGGAAAAGATTGACTTTCATCCATAAAGTGGAGCTAACTCGTATTGGATGATAGTGAGTATTAATCACACAATACATAAACATACGAAATGTGCATGTGTACCTTCCATCATTTATTAATTTTAATTTAATATAAAAGATCTATAGTTGTTGTATGAAGATTGGGGGCTTGGGACTAGTAAAACTTAGAAGCATTGTTGAATTGTCTGTTAGCAATGAGAATACTGTGAGTGGGGTGATTGGCAAATCGATGAATGAAACTTATGTCGGTTTCATTCTTGAAAAGGAAAAATAAGACAAGATCAAGGATTTTAGACCGATCTACCTCGTTATGATCTTATGTCTTTATAAGATAATTGCCAGGACCTTGGTTGATCACTTGTGAAAGGTCTTTCCTATCACGATTTTAAAATATTAGGGTGCCTTTATTGCAAGAAGACTAGTTTTAGATAAGTCTTTGTGGCTAACAAAATCATTGTAGATTATAAGAGGAAGCATAAAGGTGTTACTTTTACCATCGATTATGAGAAAGTCTATGATCATGTGGATTGGGTGTTTCTGGACAAGGTTTTTTTTGAAAAAGGGGTTTCAGTATAAGTGGAGGGCTAGGATGATGAGTTGTGAGGAATGACCTACATGCCCAGAGGGAGAATATTTTCTTCTAGGGACTTATGCCATGTGAGACCCTCTCTCCCCTTTTCTCTTTATACTAGTTGTCAATGTCCTATGTAGGTTGGTCTCTACTGGGGTGGAAAAGGGTTTCCTTGTGGGAAGGAAGAGGCCTCACCTTATGCACCTCAAGTTTGTAGATGATACTCTTTTCTTTTATTCTGGGAAGTTTCGTCCCTTGTTTCTAGCATTCTTTGAAGCAAGGTCTAGTCTAAATATTAACAAAGAAAAGAGCAACAATTTTGGCATTAATTGCTGCGACCAGTCAAAATTGAATGCATGATCATCTTTGGTGGGCTGTGAGGTGAGTATTTGGCCTTCATCATACCTTGGCCTTCCTTACGTTCATAACTTAAGGAGTCTCTTTCAGGCGTTTTTTTTTTTTCTCTTTAGATGCCCTGTGCCAATCAACAAAAGCTTGGAAAAGATTATTATAGATTTCATGAGGAGGAAGTTGAAGAGGGGGGAGGATCTCATCAAGTCAATTTTGTGGTTCTCTCTAGACATTTGTTGTTTGGGGGTTTGGGTATAGATAGCCTTTGACTAATTAATGTGACCTTGTTGGCCAAATGGTTGTTGTTTCTTTAGGGAGCCTAGGGCTTTGTGGCACAAACTCACTGTGAGCAAGTACAACCCTCATTCTTTTGAGTCGGTATCTGGTAGTAGGCGGATGCGCTCAACCTTTGGAAAGATATTGCCGTGGTTTTCCCTTTCGTTTCTCAATTTCTTAAATGTTGACTGGGGAGGGCTCAGACACCTATTTTAGAGCTATTTTGGTTTGCTGCCTTCAGAAGGGATTTTGTCCTCTTCGGCCGTCACCTTTGAGTTTGTTGTTGGAAGCTAACCCTTTGTTCCTACTTAGGAGGGATATCCTTGTTCTTCAGGGTAGGAGTGTTTCTCATCTTTTGCCCCCTTCTCCTTCCTCGGGCTTCTCTTCTAGTTCTCTTTTTCTTATTCATTCTCTCTCCTTCGATCATCCCTTCATTTTCTTTTCTCTGGAAGATTAAGTTCTTCAAGAAGGTTAAGTTCTTTGCCTGACAAGTCTTGCATGGAAGAGCGAACACTTTAGACCATGTGCAAAGACATTTTCCCTTCTTTTTGGGATTATAGTAGTGCTCCCATCACAAAGGTGCATTAGAGAGTCTTGACCATATCCTTTTGGGTTGCAAGGTTTCAGAATGCGTTTGGAGTCTCATTAGTTTGGAGAAGTAGGGATTGTATGGTTTGGATGGCAGACGTTTTGTTTTCTCCCCAAAGGATACTTTTCTTTGGCATGCCTGCTTCATTCTGTAGGGGTTTTGGATTGAGAGGATTGTAAGGCTTTTTAGAGGTTCTGATAGACCTTCAGGGGAGTTATTGGAGGTTGTTTGGTCCAATACCTTGCTTTGGGCCATGATGAGTAAGGTTTTTTGTAATTATCATCTAGGTCTTATCATTTATTGTACTTTTTTTATGGGTTGTTATTTTTATGACCTTATTCATTCTTTCATTTTTCTCAATAAAAACTCGGTTTCTTATAAAACAAAATATTTGGCCCTTTCACAAAGGGTGAGGTATAGCTGCCAGTGGGAGATGGGGCGGCTGCTGGCTAGAGAGTGAGAGTGAATTGTGGATTGCTAACAGAATGGACTTCCTACTTCGAAATTCAAACTTATTATTACAAGTCAACTGTGCAGAACCTTTTGTAACCAGTGGACTCTGTGCCATGATTTAGAAATTTTGCAAGTTCTCTTCTCATCTGCAGTTTTTTTCCTCCAATATTCACACTTGGTGAATTTTGTAATGCTCAAATTTATATTTCAGTGCAATTCAGCTTACTGAAGTGTATGCACCATTGTTTTTAGCCATTTCTGATTCTTCTTTGCAGTCTCTATTGCGCCTTCCCAGTTTGTTTTGTGTCTGTTGTCTTATAATGAGATGGAAGTTGTTGATAGCTTTTGTAGTCGTACATCTGGATAATATTTCTTGAACAATTCATTCTAGAAGATCTTGTTTCTTATGGAATATTGTGATTTCACTCTGAAATCTATACCAGACTACTACTATTTATAGGTTTTAGCGCCCTTTCTTTGTGAGAACAGGAGTTCCAAGAGGGGTTTGTTTGTTTGTGAAGCAGTTTCATTTTTGGAATTTGAGGATTGGCATTAGAAGGTTAAGTTACATTGTTTCTTTCAAGATTGGGGTACTGCATTGCTGCTTTCTCAGATTTTGCTTTGTTAATGAAGACCCTGTGAAGTAGTTAGGGAATGGAAATTGGTCTTAGCAATGAGAAGGCTGGTCAAATTTTCTGCCAATCTTATTCTTCAAGATACAGTTCTTGTTAAGAAATTTAACTTTTAAAATTTACTTGCCAATACTTTTTTAATTTCAAGTTGTTCAATCGTTCTTAAATGTGCACATAATGTAATCACCTATTGAACTTTATGCAAAATTTCATGCTCATTCTCACATCTACTTTTTGTTGTTTCTTGGTATCACATCACGTCCCATCTAATCTCTTTTTTTGAGATATCTAAGATGGCACTAAGAATTGATTTTGTTTTGATTGGAACTCAGATATCAGGGGATGTTCCTGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGTCCTATATTGAACAATGTTTGAGAGTTTATTTGATTCACACGCAGTTCTGAAACTTGTACATAAACTACTCATTTTGTGGAGTACAAGATATAATTTCAGAAGATGACTCTTGAAATCAGTCAAATCTTGGCATCCTTTTTTTCTTTCTAATGCTGTATTGATTTGGGGCTGAATTCAATTTCAGGGTAAATCCACCTCGGCAAGTCATTTCTGTTAGCCCAACATATAATTACAATGCAATGCACCCGCCACAGTCATATATTGATCCAACCTCAGGTTATTCAGTGGTTTTCTGTATCAAATAAATCATTTCTGGTTCTGTCTTTTGTGTCTGAAGTTTTAATATTTTTTCTTCTAACCACATCATCTTTAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTCAGAAAACCAAGCAATTTCATTTCACTATGAAAGATCCTGAAATTTAATTCCTATCTATATCCTTACATTATTCTTTACAGGTTTGTGGTGGAAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGCATGACTTTATCTCTTATTTTAAGTTTCATGAACTGACGCTAATTCGTAAATATGCAATTAAACTTGAGTTTCGATAATCATATATTACAGGCATAACTGTTTGGGTTTTATTTCTCTGATTTTTGAAAAGTAAACTGGGGCTGTTGAAATATTTGAAAGCTGAAAAAGATATTGTCAAGCACGCTTATATTTCTTCTTCACACGCAATAAATTGCAAGTAAAAAGAAGACATTTGATAATCATAAAAAATAAAAAATAAAAAGATTCTACCAATAAGTTGTAATGGCAAAATGGTTACCACAAGCGTATTCATTAAAAATTTAAGATCTAAAAATTGAGTTTTGATAATGATGTATATTTGATCGTGATTACCTAAACACACTTTTTCTAATGGGTGTGTGGATGTATTCTTAGTTGAATGTTCATACGGAATAAATAGTTGTTATAATAAATAAATGAATAATTGAATGACTAACAGTTAACACTGATAGTGTATCGGTTTTTGTGCTCCTTTATGTTTCCTTATGTTGTGTTTGCTTATTGTTCGTTTTGAATGCATTGACCTTTAAGTGACTGATGAAAGATACGAACTGATATAAGAGCAGTATAATTTACCATCTTTTTCTGTTGAGCGTTAAACAATGGTTATCTATATATGTATTTCTTTTATTTTCTTTTGTTTTCTGGTTAAGGGTCTTCTTTTTGAATTTTTATGTGGATGGGTTATTAGGTAGCACTGGCAAAGCAAAGGGTTGATGAATATATTTATTCTCAGTTGATACGACAAGCTGGTGTTCAACAGACAGCGTAGGTTTTCCTTCTTAACTCTTCATTCTCTCTCTCCCCCCCGTGTGAAAAAAACTCTCCTGTGGTGAAGCCGTACTCCATGGTCTAGGTTCTTATCCCCAGAAAGGAAACAAAATTAAAATAGAAATTTCATAATCAAACTACCATGGTAGCAGAAAATTCAAAACAACTTCGAGACAAGAATGACCAATGCTGAACTGAATGGTAAGCTTTGTTAAGTCATACGACATTTAATATTTTTGGCTTCAATCAGAACATGCGGGGAATTTAGGATGATTTTTGACAACGTGAAAGGTGCTTTTATCCGTTCGGATTCACTCTTTGAGGGAATAGAAACAACTTAGTGATTGAGCTATTATGCATTTTTTTTTTTTCATACCCCATGATTATTGTGCTTGGTTTCACTTTGTTCCGTATGGTTTTAAATGTTTCAATTCAATACCTATGATTTGGTTCAATCTCTTCAGCCATCTATATTGTCCGTTTTCCAAAGAAAGCGTGGGATTGAATTAAATTAAATGATGATGATATAAGAAAAACTATTTATTGGGTAACAAAAAGAAAAGTCGTCCTGGTTGTTAGTTAGCTCATTTGATGCAATGTTGTTCAGTCTGCAGATGTGGTGAATCTGAAACAGAAAGAGTCGTTAGTTGTAATGGCAACAGCTGCTGGGGAGCTCACAAGGACAGCCCCTACAAACTTCAATCCATTAATGAAGTGCTGCAAGATTTTGGAATAATGGCTTCCTTTCTTTTTTCTTCTTTTTTTGAATGTGACATATTGTAATTGTGCCAAATAGTTTACTGAATATTTTCTATATTAACAACGACTTAAGGGTTTCCGTAGCTATCAAAAAAGGCTGTTAGGGAAAAATTTGGGTTTGAGCTCTGGGTCTTCAACAAACAAAAGTTGTGATTTTCTGGTGGGCATCTTATTTCTTTTACCCCACAAATGTAACTTTTTGGATGACTCATTTCTCTATACCCTAAACAAGAAGGGAATTTTAAATTTTAATCAGTGAAATTTAACACTTTTATCAACAAAA

mRNA sequence

TTGCTATATGCTAGAGAACTAGCGCACTCGCCTTCCGACGCCCTTTGTTGGTTCTCTATGGTATCGTCAGCTATTATCATCATTTCTCTTCTGCATTCACGCCTTCGCACTCCCAGCCTGATACGGCCATCTTTCATAGCCCACTGACGTGAAGATTCCTCCAAATATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTGCCTGTTTCTATGCCCTTACCCGGGGCTCTCTTGGTTTCCGACTCCGGACATACCGTCACTGGGAAACGCCGCCGTGAGGACGACCTGATTGTATCCAATTCGGAGGCCGTAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCATTGTGCCCTCGAAGCAGATCGGGAAGGTTATCGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAAACCAAAGCTACAATCAAGATTGCCGATGCTGTCGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACTGTGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCATATTGCAGCACTGATACTGAAGGAGGATGGCACCACCAGTATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCTAATACTATTAGGCTCCTAATAGCAGGATCTCAAGCAGGGTCTTTGATTGGTGCCTCGGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCAACAATTACGATTCTCGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACAGAGTGGTGCAAATATCAGGGGATGTTCCTGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCACCTCGGCAAGTCATTTCTGTTAGCCCAACATATAATTACAATGCAATGCACCCGCCACAGTCATATATTGATCCAACCTCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTAGCACTGGCAAAGCAAAGGGTTGATGAATATATTTATTCTCAGTTGATACGACAAGCTGGTGTTCAACAGACAGCGTAGGTTTTCCTTCTTAACTCTTCATTCTCTCTCTCCCCCCCGTGTGAAAAAAACTCTCCTGTGGTGAAGCCGTACTCCATGGTCTAGGTTCTTATCCCCAGAAAGGAAACAAAATTAAAATAGAAATTTCATAATCAAACTACCATGGTAGCAGAAAATTCAAAACAACTTCGAGACAAGAATGACCAATGCTGAACTGAATGTCTGCAGATGTGGTGAATCTGAAACAGAAAGAGTCGTTAGTTGTAATGGCAACAGCTGCTGGGGAGCTCACAAGGACAGCCCCTACAAACTTCAATCCATTAATGAAGTGCTGCAAGATTTTGGAATAATGGCTTCCTTTCTTTTTTCTTCTTTTTTTGAATGTGACATATTGTAATTGTGCCAAATAGTTTACTGAATATTTTCTATATTAACAACGACTTAAGGGTTTCCGTAGCTATCAAAAAAGGCTGTTAGGGAAAAATTTGGGTTTGAGCTCTGGGTCTTCAACAAACAAAAGTTGTGATTTTCTGGTGGGCATCTTATTTCTTTTACCCCACAAATGTAACTTTTTGGATGACTCATTTCTCTATACCCTAAACAAGAAGGGAATTTTAAATTTTAATCAGTGAAATTTAACACTTTTATCAACAAAA

Coding sequence (CDS)

ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCCCTGCCTGTTTCTATGCCCTTACCCGGGGCTCTCTTGGTTTCCGACTCCGGACATACCGTCACTGGGAAACGCCGCCGTGAGGACGACCTGATTGTATCCAATTCGGAGGCCGTAGATGTATCGGCTCCCAAGAGACAGGCGAAGGCTCATGACGTGCTTTTCAGAATCATTGTGCCCTCGAAGCAGATCGGGAAGGTTATCGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAAACCAAAGCTACAATCAAGATTGCCGATGCTGTCGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCCAAGGACTGTGAGAATTCGGTTACTGATGCGGAGAAAGCACTTCAGCATATTGCAGCACTGATACTGAAGGAGGATGGCACCACCAGTATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCTAATACTATTAGGCTCCTAATAGCAGGATCTCAAGCAGGGTCTTTGATTGGTGCCTCGGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCAACAATTACGATTCTCGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACAGAGTGGTGCAAATATCAGGGGATGTTCCTGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCACCTCGGCAAGTCATTTCTGTTAGCCCAACATATAATTACAATGCAATGCACCCGCCACAGTCATATATTGATCCAACCTCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGTATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTAGCACTGGCAAAGCAAAGGGTTGATGAATATATTTATTCTCAGTTGATACGACAAGCTGGTGTTCAACAGACAGCGTAG

Protein sequence

MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYIYSQLIRQAGVQQTA

Homology

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BLAST of CmaCh17G005150 vs. Swiss-Prot
Match: PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.7e-17
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 1


Query: 68  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSV 127
           D +FR+IVP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K  E   
Sbjct: 73  DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGK--EEPE 132

Query: 128 TDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
                A+  +  +  +  G    ++  V       +++RLL+A +QA +LIG  G  I+ 
Sbjct: 133 AYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKS 192

Query: 188 LRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR 239
           +  +SGA++ IL+  + P  A+  + +R+V + G+   +LKALE I   LR
Sbjct: 193 IVENSGASVRILSEEETPFYAA--QDERIVDLQGEALKILKALEAIVGHLR 239

[Close]

BLAST of CmaCh17G005150 vs. Swiss-Prot
Match: FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 66/210 (31.43%), Postives = 109/210 (51.90%), Query Frame = 1


Query: 68  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK-DCENS 127
           + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K + E+S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 128 VTDAEKALQHIAALI---LKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQ 187
           +  +   L  +   I   L  + + +    KV T        RLL+  SQAGSLIG  G 
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVST--------RLLVPASQAGSLIGKQGG 305

Query: 188 NIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR----- 247
            ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR     
Sbjct: 306 TVKAIQEASACIVRVLGSEDLPVFAL--QDDRVVEVVGEPTSVHRALELIASHLRKFLVD 365

Query: 248 --VNPPRQVISVSPTYNYNAMHPPQSYIDP 267
             + P  +     PT   + M PP     P
Sbjct: 366 RSIIPFFENQMQKPTRQMDHMPPPHQSWGP 385

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BLAST of CmaCh17G005150 vs. Swiss-Prot
Match: HEN4_ARATH (KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13
Identity = 58/174 (33.33%), Postives = 100/174 (57.47%), Query Frame = 1


Query: 68  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKD---CE 127
           DV+F+I+  ++  G VIG  G  ++ +  ET A I + + +   EER+I +++ +   C+
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 128 NSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQN 187
           +S   A+KA+  I + +  E  T  I    +  G  ++ T RL++  SQ G ++G  G  
Sbjct: 511 SS--PAQKAIMLIFSRLF-ELATNKI----LDNGPRSSITARLVVPTSQIGCVLGKGGVI 570

Query: 188 IEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR 239
           + ++R ++GA I IL   Q P C S  E+D+VVQI+G+ P V +A+  I ++LR
Sbjct: 571 VSEMRKTTGAAIQILKVEQNPKCIS--ENDQVVQITGEFPNVREAIFHITSRLR 615

[Close]

BLAST of CmaCh17G005150 vs. Swiss-Prot
Match: IF2B3_HUMAN (Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens GN=IGF2BP3 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 8.0e-12
Identity = 69/273 (25.27%), Postives = 129/273 (47.25%), Query Frame = 1


Query: 65  KAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKI--ADAVARYEERVIIISSKD 124
           K  D+  R++VP++ +G +IGK G  I+ + ++T++ I +   +     E+ + I+S+ +
Sbjct: 192 KPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPE 251

Query: 125 CENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASG 184
             ++   +   + H  A  +K       EE+           +++L   +  G LIG  G
Sbjct: 252 GTSAACKSILEIMHKEAQDIK-----FTEEI----------PLKILAHNNFVGRLIGKEG 311

Query: 185 QNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPP 244
           +N++K+   +   ITI    +L L    +  +R + + G+V    KA EEI  ++R +  
Sbjct: 312 RNLKKIEQDTDTKITISPLQELTL----YNPERTITVKGNVETCAKAEEEIMKKIRESYE 371

Query: 245 RQVISVS------PTYNYNA--MHPPQSYIDPTSVN--------YVTFEMLISETL---- 304
             + S++      P  N NA  + PP S + P +          Y  FE   +ET+    
Sbjct: 372 NDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLFI 431

Query: 305 ----VGGLIGIGGFNISRIRNESGATIKVALAK 312
               VG +IG  G +I ++   +GA+IK+A A+
Sbjct: 432 PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445

[Close]

BLAST of CmaCh17G005150 vs. Swiss-Prot
Match: IF2B3_MOUSE (Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus GN=Igf2bp3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-11
Identity = 69/273 (25.27%), Postives = 128/273 (46.89%), Query Frame = 1


Query: 65  KAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKI--ADAVARYEERVIIISSKD 124
           K  D+  R++VP++ +G +IGK G  I+ + ++T++ I +   +     E+ + I+S+ +
Sbjct: 192 KPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPE 251

Query: 125 CENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASG 184
             ++   +   + H  A  +K       EE+           +++L   +  G LIG  G
Sbjct: 252 GTSAACKSILEIMHKEAQDIK-----FTEEI----------PLKILAHNNFVGRLIGKEG 311

Query: 185 QNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNPP 244
           +N++K+   +   ITI    +L L    +  +R + + G V    KA EEI  ++R +  
Sbjct: 312 RNLKKIEQDTDTKITISPLQELTL----YNPERTITVKGSVETCAKAEEEIMKKIRESYE 371

Query: 245 RQVISVS------PTYNYNA--MHPPQSYIDPTSVN--------YVTFEMLISETL---- 304
             + S++      P  N NA  + PP S + P +          Y  FE   +ET+    
Sbjct: 372 NDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSETETVHLFI 431

Query: 305 ----VGGLIGIGGFNISRIRNESGATIKVALAK 312
               VG +IG  G +I ++   +GA+IK+A A+
Sbjct: 432 PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445

[Close]

BLAST of CmaCh17G005150 vs. TrEMBL
Match: A0A0A0KCF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G103530 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 7.7e-163
Identity = 315/353 (89.24%), Postives = 324/353 (91.78%), Query Frame = 1


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPG LLVS+ GHTVTGKRRREDDLIVSNS+A D+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60

Query: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180
           KD ENSVTDAEKALQ IAALILKEDG +SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180

Query: 181 SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVN 240
           SGQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVN
Sbjct: 181 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 240

Query: 241 PPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300
           PPRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE
Sbjct: 241 PPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300

Query: 301 SGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           SGATIK                     VALAKQRVDEYIYSQ+IRQAGVQQTA
Sbjct: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352

[Close]

BLAST of CmaCh17G005150 vs. TrEMBL
Match: E5GCN1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.9e-140
Identity = 288/353 (81.59%), Postives = 296/353 (83.85%), Query Frame = 1


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPG LLVS+ GHTVTGKRRREDDLIVSNS+A DVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180
           KD ENSVTDAEKALQ IAALILKEDG +SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180

Query: 181 SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVN 240
           SGQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLR  
Sbjct: 181 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRKT 240

Query: 241 PPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300
                                      +VNYVTFEMLISETLVGGLIGIGGFNISRIRNE
Sbjct: 241 -------------------------NLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300

Query: 301 SGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           SGATIK                     VALAKQRVDEYIYSQ+IRQAGVQQTA
Sbjct: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 327

[Close]

BLAST of CmaCh17G005150 vs. TrEMBL
Match: I1N421_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G245600 PE=4 SV=2)

HSP 1 Score: 416.0 bits (1068), Expect = 4.3e-113
Identity = 242/360 (67.22%), Postives = 275/360 (76.39%), Query Frame = 1


Query: 2   QPGDIPLYPSMP-----AMAPLPVSMPLPGALLVSDSGHTV---TGKRRREDDLIVSNSE 61
           Q G IP+ P +P     A  P+P+ MPLP  L +  S       +GKRRR+D+     + 
Sbjct: 3   QQGQIPINPMLPPQNPMATMPMPMHMPLPMPLQIPFSAQDTAPSSGKRRRDDEA-PGTAA 62

Query: 62  AVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEE 121
           A D SA KR AK  DV+FRI+VPS+ IGKVIGK G RIQK+RE+TKATIKIADA+AR+EE
Sbjct: 63  APDQSAAKR-AKGQDVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEE 122

Query: 122 RVIIISSKDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQ 181
           RVIIISSKD +  VTDAEKAL+ IA LILKED + S++  KV  GHVAANTIRLLIAGSQ
Sbjct: 123 RVIIISSKDNDEKVTDAEKALEQIAHLILKEDDS-SLDASKVTAGHVAANTIRLLIAGSQ 182

Query: 182 AGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEI 241
           AG LIG SGQNIEKLR+SSGA+IT+LAPNQLPLCASAHESDRVVQ+SGDVPAV+KALEEI
Sbjct: 183 AGGLIGTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEI 242

Query: 242 GNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFN 301
           G QLR NPPRQVIS+SPTYNY A+ P Q Y+DPTSV+YVTFEMLISET+VGGLIG  G N
Sbjct: 243 GCQLRENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSN 302

Query: 302 ISRIRNESGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           ISRIRNESGA IK                     VALAKQRVDEYIYSQLI+Q G QQ+A
Sbjct: 303 ISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQSA 359

[Close]

BLAST of CmaCh17G005150 vs. TrEMBL
Match: K7MUI8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G245600 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 4.3e-113
Identity = 242/360 (67.22%), Postives = 275/360 (76.39%), Query Frame = 1


Query: 2   QPGDIPLYPSMP-----AMAPLPVSMPLPGALLVSDSGHTV---TGKRRREDDLIVSNSE 61
           Q G IP+ P +P     A  P+P+ MPLP  L +  S       +GKRRR+D+     + 
Sbjct: 3   QQGQIPINPMLPPQNPMATMPMPMHMPLPMPLQIPFSAQDTAPSSGKRRRDDEA-PGTAA 62

Query: 62  AVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEE 121
           A D SA KR AK  DV+FRI+VPS+ IGKVIGK G RIQK+RE+TKATIKIADA+AR+EE
Sbjct: 63  APDQSAAKR-AKGQDVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEE 122

Query: 122 RVIIISSKDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQ 181
           RVIIISSKD +  VTDAEKAL+ IA LILKED + S++  KV  GHVAANTIRLLIAGSQ
Sbjct: 123 RVIIISSKDNDEKVTDAEKALEQIAHLILKEDDS-SLDASKVTAGHVAANTIRLLIAGSQ 182

Query: 182 AGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEI 241
           AG LIG SGQNIEKLR+SSGA+IT+LAPNQLPLCASAHESDRVVQ+SGDVPAV+KALEEI
Sbjct: 183 AGGLIGTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEI 242

Query: 242 GNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFN 301
           G QLR NPPRQVIS+SPTYNY A+ P Q Y+DPTSV+YVTFEMLISET+VGGLIG  G N
Sbjct: 243 GCQLRENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSN 302

Query: 302 ISRIRNESGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           ISRIRNESGA IK                     VALAKQRVDEYIYSQLI+Q G QQ+A
Sbjct: 303 ISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQSA 359

[Close]

BLAST of CmaCh17G005150 vs. TrEMBL
Match: V7B4A4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G051300g PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.4e-111
Identity = 236/355 (66.48%), Postives = 273/355 (76.90%), Query Frame = 1


Query: 3   PGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGH----TVTGKRRREDDLIVSNSEAVDVS 62
           P  + +   MP   P+ + MPLP  L V  S H      +GKRRRED+     + A + S
Sbjct: 27  PMHMQMQMQMPMPLPMQMQMPLPMPLQVPFSVHDPAAASSGKRRREDEA-PGTAAATEQS 86

Query: 63  APKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII 122
           A KR AK  DV+FRI+VPS+QIGKVIGK GCRIQ++RE+TKATIKIADA+AR+EERVIII
Sbjct: 87  AAKR-AKGQDVIFRIVVPSRQIGKVIGKEGCRIQRIREDTKATIKIADAIARHEERVIII 146

Query: 123 SSKDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLI 182
           SSKD +  +TDAEKAL+ IA LILKED + S++  KV  GHVAANTIRLLIAGSQAG LI
Sbjct: 147 SSKDNDEKLTDAEKALEQIAHLILKEDDS-SLDLSKVAAGHVAANTIRLLIAGSQAGGLI 206

Query: 183 GASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR 242
           G SGQNIEKLR+SSGA+IT+LAPNQLPLCASAHESDRVVQ+SGDVP+V+KAL+EIG QLR
Sbjct: 207 GMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPSVMKALDEIGCQLR 266

Query: 243 VNPPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIR 302
            NPPRQVIS+SPTYNY ++ P Q Y+DPTSV+YVTFEMLISET+VGGLIG  G NISRIR
Sbjct: 267 ENPPRQVISISPTYNYASIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIR 326

Query: 303 NESGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           NESGA IK                     VALAKQRVDEYIYSQLI+Q G QQ+A
Sbjct: 327 NESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQSA 378

[Close]

BLAST of CmaCh17G005150 vs. TAIR10
Match: AT5G15270.2 (AT5G15270.2 RNA-binding KH domain-containing protein)

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-21
Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 1


Query: 68  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK------ 127
           D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S       
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 128 --DCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIG 187
             D E  ++ A+ AL  I   ++ +D  +  E+   G   V   T +LL+   Q G ++G
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARS--EDSPEGEKQV---TAKLLVPSDQIGCILG 168

Query: 188 ASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV 247
             GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG+V  V KAL +I ++L  
Sbjct: 169 RGGQIVQNIRSETGAQIRIVKDRNMPLCAL--NSDELIQISGEVLIVKKALLQIASRLHE 228

Query: 248 NPPRQVISVSPTYNYNA 257
           NP R    +S +  Y A
Sbjct: 229 NPSRSQNLLSSSGGYPA 238

[Close]

BLAST of CmaCh17G005150 vs. TAIR10
Match: AT1G14170.3 (AT1G14170.3 RNA-binding KH domain-containing protein)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-20
Identity = 81/278 (29.14%), Postives = 139/278 (50.00%), Query Frame = 1


Query: 66  AHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII--SSKDC 125
           + D ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ +  ++++ 
Sbjct: 41  SEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL 100

Query: 126 ENSVTDAEKALQHIAALILKEDGTTSIEELKVGT------GHVAANTIRLLIAGSQAGSL 185
            +   D E     + AL    D   +  +   GT      G     T+R+L+   Q G +
Sbjct: 101 NHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCV 160

Query: 186 IGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQL 245
           IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L
Sbjct: 161 IGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 220

Query: 246 RVNPPR-QVISVSPTYNYNAMHPPQSYIDPTSV-----NYVTFE-----------MLISE 305
             NP R Q + +S   + ++MH P + +   ++     NY                +   
Sbjct: 221 HDNPSRFQHLLLSS--SSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPA 280

Query: 306 TLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI 319
             VGG+IG GG  I++IR E+GATI+V  ++   D+ I
Sbjct: 281 ENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCI 315

[Close]

BLAST of CmaCh17G005150 vs. TAIR10
Match: AT4G26000.1 (AT4G26000.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-18
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 1


Query: 68  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDCENSV 127
           D +FR+IVP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K  E   
Sbjct: 73  DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGK--EEPE 132

Query: 128 TDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
                A+  +  +  +  G    ++  V       +++RLL+A +QA +LIG  G  I+ 
Sbjct: 133 AYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKS 192

Query: 188 LRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR 239
           +  +SGA++ IL+  + P  A+  + +R+V + G+   +LKALE I   LR
Sbjct: 193 IVENSGASVRILSEEETPFYAA--QDERIVDLQGEALKILKALEAIVGHLR 239

[Close]

BLAST of CmaCh17G005150 vs. TAIR10
Match: AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 66/210 (31.43%), Postives = 109/210 (51.90%), Query Frame = 1


Query: 68  DVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK-DCENS 127
           + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K + E+S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 128 VTDAEKALQHIAALI---LKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQ 187
           +  +   L  +   I   L  + + +    KV T        RLL+  SQAGSLIG  G 
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVST--------RLLVPASQAGSLIGKQGG 305

Query: 188 NIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR----- 247
            ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR     
Sbjct: 306 TVKAIQEASACIVRVLGSEDLPVFAL--QDDRVVEVVGEPTSVHRALELIASHLRKFLVD 365

Query: 248 --VNPPRQVISVSPTYNYNAMHPPQSYIDP 267
             + P  +     PT   + M PP     P
Sbjct: 366 RSIIPFFENQMQKPTRQMDHMPPPHQSWGP 385

[Close]

BLAST of CmaCh17G005150 vs. TAIR10
Match: AT1G51580.1 (AT1G51580.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 78.6 bits (192), Expect = 8.2e-15
Identity = 57/185 (30.81%), Postives = 100/185 (54.05%), Query Frame = 1


Query: 56  DVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERV 115
           DV    R     +V FR++ P+ ++G +IGK G  ++ ++ E+ A+IK++D     EER+
Sbjct: 263 DVGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERI 322

Query: 116 IIISSKDCENSVTDAEKALQHIAALILKEDGTTSIEE--LKVGTGHVAANTIRLLIAGSQ 175
           I+IS+++      + E+  +H     L +DG   +    +++G    AA   RLL+    
Sbjct: 323 IVISARE------NLER--RH----SLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPY 382

Query: 176 AGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEI 235
            G L+G  G  I ++R ++GA+I + A +Q     S H  D +VQ+ G++  V  AL +I
Sbjct: 383 IGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQH--DEIVQVIGNLKTVQDALFQI 433

Query: 236 GNQLR 239
             +LR
Sbjct: 443 LCRLR 433

[Close]

BLAST of CmaCh17G005150 vs. NCBI nr
Match: gi|659119648|ref|XP_008459768.1| (PREDICTED: poly(rC)-binding protein 4-like [Cucumis melo])

HSP 1 Score: 581.6 bits (1498), Expect = 8.5e-163
Identity = 316/353 (89.52%), Postives = 324/353 (91.78%), Query Frame = 1


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPG LLVS+ GHTVTGKRRREDDLIVSNS+A DVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180
           KD ENSVTDAEKALQ IAALILKEDG +SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180

Query: 181 SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVN 240
           SGQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVN
Sbjct: 181 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 240

Query: 241 PPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300
           PPRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE
Sbjct: 241 PPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300

Query: 301 SGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           SGATIK                     VALAKQRVDEYIYSQ+IRQAGVQQTA
Sbjct: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352

[Close]

BLAST of CmaCh17G005150 vs. NCBI nr
Match: gi|778712033|ref|XP_011656837.1| (PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis sativus])

HSP 1 Score: 581.3 bits (1497), Expect = 1.1e-162
Identity = 315/353 (89.24%), Postives = 324/353 (91.78%), Query Frame = 1


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPG LLVS+ GHTVTGKRRREDDLIVSNS+A D+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60

Query: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180
           KD ENSVTDAEKALQ IAALILKEDG +SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180

Query: 181 SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVN 240
           SGQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVN
Sbjct: 181 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 240

Query: 241 PPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300
           PPRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE
Sbjct: 241 PPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300

Query: 301 SGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           SGATIK                     VALAKQRVDEYIYSQ+IRQAGVQQTA
Sbjct: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352

[Close]

BLAST of CmaCh17G005150 vs. NCBI nr
Match: gi|307136423|gb|ADN34230.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 506.9 bits (1304), Expect = 2.7e-140
Identity = 288/353 (81.59%), Postives = 296/353 (83.85%), Query Frame = 1


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPG LLVS+ GHTVTGKRRREDDLIVSNS+A DVSAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180
           KD ENSVTDAEKALQ IAALILKEDG +SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180

Query: 181 SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVN 240
           SGQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLR  
Sbjct: 181 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRKT 240

Query: 241 PPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300
                                      +VNYVTFEMLISETLVGGLIGIGGFNISRIRNE
Sbjct: 241 -------------------------NLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300

Query: 301 SGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           SGATIK                     VALAKQRVDEYIYSQ+IRQAGVQQTA
Sbjct: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 327

[Close]

BLAST of CmaCh17G005150 vs. NCBI nr
Match: gi|645253106|ref|XP_008232425.1| (PREDICTED: poly(rC)-binding protein 4-like [Prunus mume])

HSP 1 Score: 421.0 bits (1081), Expect = 1.9e-114
Identity = 242/356 (67.98%), Postives = 274/356 (76.97%), Query Frame = 1


Query: 2   QPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDL--IVSNSEAVDVSA 61
           QPG +P++P +    P    +P+ G    S+   + T KRRRED+   +++  E  +  A
Sbjct: 3   QPGQLPIHPQI--QMPPTTLIPITG----SEPAQSATLKRRREDEYPPVLAGPEPQEPGA 62

Query: 62  PKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIIS 121
            KR+AKA DV+FRI+VPS+QIGKVIGK GCRIQK+REETKA IKIADA+AR+EERVIIIS
Sbjct: 63  -KRRAKAQDVIFRIVVPSRQIGKVIGKEGCRIQKIREETKANIKIADAIARHEERVIIIS 122

Query: 122 SKDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIG 181
           SKD +N+ TDAEKALQ IA LILKED + + E  KVG GHVAANTIRLLIAGSQAGSLIG
Sbjct: 123 SKDSDNASTDAEKALQQIAGLILKEDDSGA-EAAKVGAGHVAANTIRLLIAGSQAGSLIG 182

Query: 182 ASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV 241
            SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQ+SGDVPAVLKALEEIG+QLR 
Sbjct: 183 MSGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQVSGDVPAVLKALEEIGDQLRE 242

Query: 242 NPPRQVISVSPTYNYNAMHPP--QSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRI 301
           NPPRQVIS+SP YNY  + PP  Q Y+DPTS  Y+TFEM+ISETLVGGLIG  G NI RI
Sbjct: 243 NPPRQVISISPAYNYTTIRPPQVQPYMDPTSAEYITFEMVISETLVGGLIGRCGSNIQRI 302

Query: 302 RNESGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           RNESGA IK                     VALAKQRVDEYIYSQLI+QAG QQ A
Sbjct: 303 RNESGAMIKVYGGKGAQKHRQIQFCGSAQQVALAKQRVDEYIYSQLIQQAGAQQPA 350

[Close]

BLAST of CmaCh17G005150 vs. NCBI nr
Match: gi|947051445|gb|KRH00974.1| (hypothetical protein GLYMA_18G245600 [Glycine max])

HSP 1 Score: 416.0 bits (1068), Expect = 6.2e-113
Identity = 242/360 (67.22%), Postives = 275/360 (76.39%), Query Frame = 1


Query: 2   QPGDIPLYPSMP-----AMAPLPVSMPLPGALLVSDSGHTV---TGKRRREDDLIVSNSE 61
           Q G IP+ P +P     A  P+P+ MPLP  L +  S       +GKRRR+D+     + 
Sbjct: 3   QQGQIPINPMLPPQNPMATMPMPMHMPLPMPLQIPFSAQDTAPSSGKRRRDDEA-PGTAA 62

Query: 62  AVDVSAPKRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEE 121
           A D SA KR AK  DV+FRI+VPS+ IGKVIGK G RIQK+RE+TKATIKIADA+AR+EE
Sbjct: 63  APDQSAAKR-AKGQDVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEE 122

Query: 122 RVIIISSKDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQ 181
           RVIIISSKD +  VTDAEKAL+ IA LILKED + S++  KV  GHVAANTIRLLIAGSQ
Sbjct: 123 RVIIISSKDNDEKVTDAEKALEQIAHLILKEDDS-SLDASKVTAGHVAANTIRLLIAGSQ 182

Query: 182 AGSLIGASGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEI 241
           AG LIG SGQNIEKLR+SSGA+IT+LAPNQLPLCASAHESDRVVQ+SGDVPAV+KALEEI
Sbjct: 183 AGGLIGTSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEI 242

Query: 242 GNQLRVNPPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFN 301
           G QLR NPPRQVIS+SPTYNY A+ P Q Y+DPTSV+YVTFEMLISET+VGGLIG  G N
Sbjct: 243 GCQLRENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSN 302

Query: 302 ISRIRNESGATIK---------------------VALAKQRVDEYIYSQLIRQAGVQQTA 333
           ISRIRNESGA IK                     VALAKQRVDEYIYSQLI+Q G QQ+A
Sbjct: 303 ISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQSA 359

The following BLAST results are available for this feature:

BLAST of CmaCh17G005150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PEP_ARATH	3.7e-17	32.75	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP P...	[more]
FLK_ARATH	2.0e-15	31.43	Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1	[more]
HEN4_ARATH	1.9e-13	33.33	KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1	[more]
IF2B3_HUMAN	8.0e-12	25.27	Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens GN=IGF2BP3 P...	[more]
IF2B3_MOUSE	1.0e-11	25.27	Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus GN=Igf2bp3 P...	[more]

BLAST of CmaCh17G005150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCF8_CUCSA	7.7e-163	89.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G103530 PE=4 SV=1	[more]
E5GCN1_CUCME	1.9e-140	81.59	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
I1N421_SOYBN	4.3e-113	67.22	Uncharacterized protein OS=Glycine max GN=GLYMA_18G245600 PE=4 SV=2	[more]
K7MUI8_SOYBN	4.3e-113	67.22	Uncharacterized protein OS=Glycine max GN=GLYMA_18G245600 PE=4 SV=1	[more]
V7B4A4_PHAVU	1.4e-111	66.48	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G051300g PE=4 SV=1	[more]

BLAST of CmaCh17G005150 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15270.2	5.9e-21	34.52	RNA-binding KH domain-containing protein	[more]
AT1G14170.3	2.2e-20	29.14	RNA-binding KH domain-containing protein	[more]
AT4G26000.1	2.1e-18	32.75	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	1.1e-16	31.43	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	8.2e-15	30.81	RNA-binding KH domain-containing protein	[more]

BLAST of CmaCh17G005150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119648\|ref\|XP_008459768.1\|	8.5e-163	89.52	PREDICTED: poly(rC)-binding protein 4-like [Cucumis melo]	[more]
gi\|778712033\|ref\|XP_011656837.1\|	1.1e-162	89.24	PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis sativus...	[more]
gi\|307136423\|gb\|ADN34230.1\|	2.7e-140	81.59	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|645253106\|ref\|XP_008232425.1\|	1.9e-114	67.98	PREDICTED: poly(rC)-binding protein 4-like [Prunus mume]	[more]
gi\|947051445\|gb\|KRH00974.1\|	6.2e-113	67.22	hypothetical protein GLYMA_18G245600 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004087	KH_dom
IPR004088	KH_dom_type_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003723	RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005150.1	CmaCh17G005150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 67..142 score: 1.3E-8coord: 270..323 score: 0.51coord: 161..238 score: 3.
IPR004088	K Homology domain, type 1	GENE3D	G3DSA:3.30.1370.10		coord: 61..141 score: 1.7E-14coord: 163..240 score: 4.3E-16coord: 271..309 score: 3.
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 72..133 score: 2.9E-10coord: 164..233 score: 3.0E-12coord: 273..308 score: 1.
IPR004088	K Homology domain, type 1	PROFILE	PS50084	KH_TYPE_1	coord: 271..332 score: 11.28coord: 68..134 score: 14.969coord: 162..233 score: 1
IPR004088	K Homology domain, type 1	unknown	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 66..141 score: 2.53E-12coord: 265..308 score: 5.94E-8coord: 157..238 score: 1.9
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 40..330 score: 3.9E
None	No IPR available	PANTHER	PTHR10288:SF159	SUBFAMILY NOT NAMED	coord: 40..330 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G005150	Cla006706	Watermelon (97103) v1	cmawmB351
CmaCh17G005150	Csa6G103530	Cucumber (Chinese Long) v2	cmacuB372
CmaCh17G005150	MELO3C022266	Melon (DHL92) v3.5.1	cmameB313
CmaCh17G005150	ClCG06G002610	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G005150	CSPI06G08150	Wild cucumber (PI 183967)	cmacpiB376
CmaCh17G005150	CmoCh17G004870	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G005150	CmoCh08G001400	Cucurbita moschata (Rifu)	cmacmoB368
CmaCh17G005150	Lsi09G016770	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G005150	Cp4.1LG12g04450	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G005150	Cp4.1LG17g10430	Cucurbita pepo (Zucchini)	cmacpeB381
CmaCh17G005150	MELO3C022266.2	Melon (DHL92) v3.6.1	cmamedB365
CmaCh17G005150	CsaV3_6G008530	Cucumber (Chinese Long) v3	cmacucB0445
CmaCh17G005150	Cla97C06G111970	Watermelon (97103) v2	cmawmbB377
CmaCh17G005150	Bhi12G001969	Wax gourd	cmawgoB0457
CmaCh17G005150	CsGy6G008220	Cucumber (Gy14) v2	cgybcmaB756
CmaCh17G005150	Carg26737	Silver-seed gourd	carcmaB0180
CmaCh17G005150	Carg04966	Silver-seed gourd	carcmaB0105

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G005150	CmaCh08G001390	Cucurbita maxima (Rimu)	cmacmaB375

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G005150	Cucumber (Gy14) v1	cgycmaB0295