CmaCh17G004200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G004200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr17 : 2479839 .. 2482249 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCAGCGTCGCCATGTTCACCATTCACGTTGACACAGTGTATGATCTGAGGCTCGCGGTGTTGCCATTGGCTACGCTCTGCGATGAAGCCGATATCAAATGCTCAAGAGAAAAGTTGTCCATAATCGTCGTTTCTTCTCCCTATCCCTTCGTTGCATCGCTTCGAATGTTGCCTACATTCTTCACTACCTTTCAGTTGCACCCCGACGGCGACAACTTCGAGGAACATCGGTACAAATTTCTCCTTCAACTCTTCGCTACTAATATTTCCAATATGTACAGCGAAGATCTTTCCATGACCATCTATATCGGCGGAAACCAAAGACTCGCGCCCTTGAAATTTGAGGATCCTCGTAAGTTTATTACTCACTACGTTTTTCGATTTTATTCTGAAGAATCGTGATTTCCTAATTGAATTCACTGTTGATTTCTTAATCGAGGATGATTTCTCTCTGCTCTGAAATTGATTGAAACTTTGATTTGACGATGTTAGGTCATTTCCGGATTTTTTTGATCTCCAGAATCGTTGTGCCTAGTGTGCGATGAAATCTTTTTCTAACTCTAATTGAATTGAATGTCGTCGTTACTGTGATTTCTTGAATTGATTATGATTTCTCTCCGGCCTGTAATTTTGAATGAATCTTGAATTTTATGATTTTAGGGATTTTCACGGCCATTTTGATAGCAGGAATAGTTGTTGTTGCGACGATTTCGATTTCATTTCCGAAGAATCTTGATTCTAATTGAACTGAATGTTGTCATTCTGGCGATTCCTTTTTGACGACGATTCCCGCAATTTTGATTGAATCTTGGATTTTTTTGATCTCTAGAATAGTCGTTGTTTTGGTTTTCACTAAATTATAGAGCGATGGATTAAACGAACATGGAATTTGATATTTGATATGAAAAGAAAGAACAGAGCCGTGAATTATGTGTTCTTTTTGCCTTCATCACATATGAATCATTTTCTCTCCGGTCTGTAATTGTGCAGTATTTGATACATTTCTACCATCAATTCAATTTTTAAACTGTTAATTCTGATTTCAGATACTGGATATCTGCAATACTCTGCATTGGTATTGTCACATGCCCAAAATATTGATATCAGCCCAATTGATTTCGGAGTTTTTGTTGCAATTCGTTCAACGGAGTTCATAAATATCGTGTCTGACTTGGTGATCCTCCCCGATGAGTTAGGTAACTTGAATTCTTCCTTTTGCAGTTAATGTAAAAGAATAGTCTTAAATTTTCTGAAATTTGTTTTCTTCTTCTACATCAGTTTCTATTACTTTAACAGAGACGGAGGTCAAGTTCGGTGCTCTAACTGGGGAAGTTACTTTCACCACAGAGGTAAGGACTTCATAACCATTTTTCACAGCATTTACTAATGAAACTCAAATCTCTTAGCTGGTGTTCTAGCTCACCCATTAGTTTGTAGCATAACTAAAATAGTTTAAATTCTAGTTTGGTCATGGATTTAGTGGGGGTACTTTTTAAAATGTTCATTCAAGTTCTAGTTTAATTTTAAAATGGTCCATTTTAAAATGTGACAATGTTAATAGCTATTAGTAAAGAACTAAAACGAACCAAAGTTGAATATGTAGGGACTAAAATGAACGTTTTGAAATTATGAAAACACATAAACCCTGCAAAGAGTACAAGGACCAAAGTAATGTTTATATATACTTTGATACTTTATTTGTTTATTGTGATTTTATTGATCTCTATATAAACTTTCCAAATACTTAGTTATCGCAATCTAAATATGAATTATAATTACTTAAATTTTAAATTTTATGGCTTATCCCAAATAACTTTGTTGAAGATGGTTGGTGGGAGTCATATATCGACTGATTAAGAGAATGATTATGAATTTATAATTAAGGAATACATTTTCATTAATACGAGACCTTTTGGAGAAACCAATAGCAAAGCCATGAAAGTTTATTTTCAAAGTAGACAATATCGTACTATTGTAGAGAGTTGTGATTTCTAACAACAACTAGTATGAGGTGATATGGTGCAGAATAAAGATTGCATAATTGGGGGTGTCAAGGGAGGAAAAGTATTTTACTTCATTATCACTCTGCATCCCGTTTACTTTTTCTTCCATATATCCTATACCTCCAAGTTTGTGTGGATATTCAAGACAGTCAGTTCACGCAACTTGTTGAGCTGCTGTACAGGACTACATGCTAGCTATCTGGTCTGTTATTGACATTGGAATAATACCTGTGAAGCCAATGTAAGTTTCTCTTTGATGAATCTTTATCTGTGAAATATGCATATAATAATGGTCACTGGATCATGTGGATGCATAATTTTGGCATACTCTACATTAGGGTTTAGCTTCTCTACGTGTATATAGAATTTTATGGTTGATATGTGTTTAAATTTTGTACAAACAGAG

mRNA sequence

CTCTCAGCGTCGCCATGTTCACCATTCACGTTGACACAGTGTATGATCTGAGGCTCGCGGTGTTGCCATTGGCTACGCTCTGCGATGAAGCCGATATCAAATGCTCAAGAGAAAAGTTGTCCATAATCGTCGTTTCTTCTCCCTATCCCTTCGTTGCATCGCTTCGAATGTTGCCTACATTCTTCACTACCTTTCAGTTGCACCCCGACGGCGACAACTTCGAGGAACATCGGTACAAATTTCTCCTTCAACTCTTCGCTACTAATATTTCCAATATGTACAGCGAAGATCTTTCCATGACCATCTATATCGGCGGAAACCAAAGACTCGCGCCCTTGAAATTTGAGGATCCTCATACTGGATATCTGCAATACTCTGCATTGGTATTGTCACATGCCCAAAATATTGATATCAGCCCAATTGATTTCGGAGTTTTTGTTGCAATTCGTTCAACGGAGTTCATAAATATCGTGTCTGACTTGGTGATCCTCCCCGATGAGTTAGTTTCTATTACTTTAACAGAGACGGAGGTCAAGTTCGGTGCTCTAACTGGGGAAGTTACTTTCACCACAGAGAATAAAGATTGCATAATTGGGGGTGTCAAGGGAGGAAAAGTATTTTACTTCATTATCACTCTGCATCCCGTTTACTTTTTCTTCCATATATCCTATACCTCCAAGTTTGTGTGGATATTCAAGACAGTCAGTTCACGCAACTTGTTGAGCTGCTGTACAGGACTACATGCTAGCTATCTGGTCTGTTATTGACATTGGAATAATACCTGTGAAGCCAATGTAAGTTTCTCTTTGATGAATCTTTATCTGTGAAATATGCATATAATAATGGTCACTGGATCATGTGGATGCATAATTTTGGCATACTCTACATTAGGGTTTAGCTTCTCTACGTGTATATAGAATTTTATGGTTGATATGTGTTTAAATTTTGTACAAACAGAG

Coding sequence (CDS)

ATGTTCACCATTCACGTTGACACAGTGTATGATCTGAGGCTCGCGGTGTTGCCATTGGCTACGCTCTGCGATGAAGCCGATATCAAATGCTCAAGAGAAAAGTTGTCCATAATCGTCGTTTCTTCTCCCTATCCCTTCGTTGCATCGCTTCGAATGTTGCCTACATTCTTCACTACCTTTCAGTTGCACCCCGACGGCGACAACTTCGAGGAACATCGGTACAAATTTCTCCTTCAACTCTTCGCTACTAATATTTCCAATATGTACAGCGAAGATCTTTCCATGACCATCTATATCGGCGGAAACCAAAGACTCGCGCCCTTGAAATTTGAGGATCCTCATACTGGATATCTGCAATACTCTGCATTGGTATTGTCACATGCCCAAAATATTGATATCAGCCCAATTGATTTCGGAGTTTTTGTTGCAATTCGTTCAACGGAGTTCATAAATATCGTGTCTGACTTGGTGATCCTCCCCGATGAGTTAGTTTCTATTACTTTAACAGAGACGGAGGTCAAGTTCGGTGCTCTAACTGGGGAAGTTACTTTCACCACAGAGAATAAAGATTGCATAATTGGGGGTGTCAAGGGAGGAAAAGTATTTTACTTCATTATCACTCTGCATCCCGTTTACTTTTTCTTCCATATATCCTATACCTCCAAGTTTGTGTGGATATTCAAGACAGTCAGTTCACGCAACTTGTTGAGCTGCTGTACAGGACTACATGCTAGCTATCTGGTCTGTTATTGA

Protein sequence

MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTFQLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQYSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTGEVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLSCCTGLHASYLVCY

Homology

[Close]

BLAST of CmaCh17G004200 vs. TrEMBL
Match: A0A0A0K836_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002370 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-45
Identity = 107/256 (41.80%), Postives = 163/256 (63.67%), Query Frame = 1


Query: 1   MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTF 60
           MFTIH++    LR  +LP+A + + A I CS + LS  VV+    FVA LR+ P+FFT+F
Sbjct: 3   MFTIHIERGNALRRLLLPIANVSNTAQINCSLQCLSF-VVTPRNNFVAVLRIFPSFFTSF 62

Query: 61  QLHPD-GDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQ 120
           Q +P+    +     +  L+L  TNISNM ++DLS+T+Y+   Q   P++F DP +GYLQ
Sbjct: 63  QFNPNFAGQYTSFHARLYLKLLHTNISNMLTDDLSVTVYLNRFQSTVPVRFYDPRSGYLQ 122

Query: 121 YSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALT 180
           +SAL+L+ A+ I++ P+D GVF AIRS EF+ I++DL +L  E   I ++ T   F +L 
Sbjct: 123 FSALLLARARRINMYPVDMGVFFAIRSDEFLKILTDLRVLAGEYFVIYVSTTNALFKSLR 182

Query: 181 GEVTFTTENKD--CIIGGV-KGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSS--RN 240
            E+ + T++ +   ++GGV  GG   +F+I   P++FF++ +  SK VW F    +  R+
Sbjct: 183 REIAYNTQDDENMMVMGGVPTGGARQFFLICPSPLHFFYYTASISKMVWFFIAAENYPRH 242

Query: 241 LLSCCTGLHASYLVCY 251
            LSCC  +HASYLVC+
Sbjct: 243 FLSCCVNIHASYLVCF 257

[Close]

BLAST of CmaCh17G004200 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15
Identity = 67/209 (32.06%), Postives = 111/209 (53.11%), Query Frame = 1


Query: 19  LATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTFQLHPDGDNFEEHRYKFLL 78
           L+ L +E DI+ S  KLS+++ +    F+A L+M   FF  +       +   ++++F L
Sbjct: 21  LSHLGEEVDIRVSPLKLSLMLPNFSPSFIAGLQMTHEFFNLYI------SDRTYQFRFSL 80

Query: 79  QLFATNISNMYSEDLSMTIYIGGNQRLAP--LKFEDPHTGYLQYSALVLSHAQNIDISPI 138
           + F T +  M  +  S  ++    +RL    L FE+ +    +    +L++  ++D   I
Sbjct: 81  RKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFENNNAKRERRRLKLLAYDLDLD-GDI 140

Query: 139 DFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTGEVTFTTENKDCIIGGV 198
           ++  FV+I S +F  I S+L       VS+T T + V F     E+TF+ E   C+IGGV
Sbjct: 141 EYTTFVSIDSRDFRRIASEL---NSRSVSVTFTNSRVNFFNKNKEITFSKEENQCVIGGV 200

Query: 199 KGGKVFYFIITLHPVYFFFHISYTSKFVW 226
           + G+ F FIIT+HP+ FF  +S  SK VW
Sbjct: 201 EEGEEFRFIITVHPLVFFLDLSSQSKRVW 219

[Close]

BLAST of CmaCh17G004200 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.1e-11
Identity = 62/238 (26.05%), Postives = 106/238 (44.54%), Query Frame = 1


Query: 15  AVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTFQLHPDGDNFEEHRY 74
           A+  L+   + A+I+CS    S+IV         + +M+P FF  F  +        H  
Sbjct: 13  AIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFSN------RTHSS 72

Query: 75  KFLLQLFATNISNMYSEDL-SMTIYIGGNQRLAPLKFEDPHTGYLQYSALVLSHAQNIDI 134
           K  +Q     I  M    + S++ ++        LKF  P           +  A   D+
Sbjct: 73  KIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRCAVKEDM 132

Query: 135 SPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTGEVTFTTENKDCII 194
             ID   FV+I S +F  +V+      D  V +T T + V+F     E  F  E  +CI+
Sbjct: 133 GNIDLETFVSIDSQQFRRVVTGC---RDYFVRVTTTHSHVRFSNEIKEFIFAREGGECIM 192

Query: 195 GGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSS-RNLLSCCTGLHASYLVCY 251
            GV  GK   F+I ++P + F++I++ +K VW+FK++      +    GL A +++ +
Sbjct: 193 EGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLFARFVIYF 241

[Close]

BLAST of CmaCh17G004200 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 69/246 (28.05%), Postives = 114/246 (46.34%), Query Frame = 1


Query: 2   FTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVA-SLRMLPTFFTTF 61
           F + VD +  L  +++ L  +   AD   S +   I+  S      A  +++ P FF +F
Sbjct: 4   FRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDSF 63

Query: 62  QLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGG-NQRLAPLKFEDPHTGYLQ 121
                 D+  +  +  L  LF   +  + S   S+T  I       A  KFE P+     
Sbjct: 64  Y----SDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRD 123

Query: 122 YSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFG-AL 181
            + L+    + + I  ID   FV++ S EF NI+S+  +   + V + +T   V F  A+
Sbjct: 124 VNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMF--DYVEVIITSRRVSFSYAI 183

Query: 182 TGEVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTV-SSRNLLS 241
             E   T E+  C+IGGV+      FIIT+     FFH +  SK +W+FK V S++ +++
Sbjct: 184 IQETIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIIT 243

Query: 242 CCTGLH 244
              GL+
Sbjct: 244 APLGLY 243

[Close]

BLAST of CmaCh17G004200 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08
Identity = 68/246 (27.64%), Postives = 111/246 (45.12%), Query Frame = 1


Query: 2   FTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSS-PYPFVASLRMLPTFFTTF 61
           F + VD +  L  +++ L  +   AD   S +   I+  S         L++ P FF +F
Sbjct: 4   FRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDSF 63

Query: 62  QLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGG-NQRLAPLKFEDPHTGYLQ 121
                 DN  +  +  L  LF   +  + S   S+T  I       A  KFE P+    +
Sbjct: 64  Y----SDNLRQIFWFRLTHLFPLALELLESGCTSLTFSIERFRHNYAQFKFEGPNGLLRE 123

Query: 122 YSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALT 181
            +  +    + + I  ID   FV + S EF  I+S   +   + V + +T   V F + T
Sbjct: 124 VNFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMF--DYVEVIITSRRVSFSSST 183

Query: 182 -GEVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTV-SSRNLLS 241
             E T + E+  CI+GGV+      FIIT+     FFH +  SK +W+FK V S++ +++
Sbjct: 184 IQETTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIIT 243

Query: 242 CCTGLH 244
              GL+
Sbjct: 244 APLGLY 243

[Close]

BLAST of CmaCh17G004200 vs. NCBI nr
Match: gi|778709035|ref|XP_011656333.1| (PREDICTED: uncharacterized protein LOC101204354 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45
Identity = 107/256 (41.80%), Postives = 163/256 (63.67%), Query Frame = 1


Query: 1   MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTF 60
           MFTIH++    LR  +LP+A + + A I CS + LS  VV+    FVA LR+ P+FFT+F
Sbjct: 3   MFTIHIERGNALRRLLLPIANVSNTAQINCSLQCLSF-VVTPRNNFVAVLRIFPSFFTSF 62

Query: 61  QLHPD-GDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQ 120
           Q +P+    +     +  L+L  TNISNM ++DLS+T+Y+   Q   P++F DP +GYLQ
Sbjct: 63  QFNPNFAGQYTSFHARLYLKLLHTNISNMLTDDLSVTVYLNRFQSTVPVRFYDPRSGYLQ 122

Query: 121 YSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALT 180
           +SAL+L+ A+ I++ P+D GVF AIRS EF+ I++DL +L  E   I ++ T   F +L 
Sbjct: 123 FSALLLARARRINMYPVDMGVFFAIRSDEFLKILTDLRVLAGEYFVIYVSTTNALFKSLR 182

Query: 181 GEVTFTTENKD--CIIGGV-KGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSS--RN 240
            E+ + T++ +   ++GGV  GG   +F+I   P++FF++ +  SK VW F    +  R+
Sbjct: 183 REIAYNTQDDENMMVMGGVPTGGARQFFLICPSPLHFFYYTASISKMVWFFIAAENYPRH 242

Query: 241 LLSCCTGLHASYLVCY 251
            LSCC  +HASYLVC+
Sbjct: 243 FLSCCVNIHASYLVCF 257

[Close]

BLAST of CmaCh17G004200 vs. NCBI nr
Match: gi|659116794|ref|XP_008458263.1| (PREDICTED: uncharacterized protein LOC103497731 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-44
Identity = 106/256 (41.41%), Postives = 161/256 (62.89%), Query Frame = 1


Query: 1   MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTF 60
           MFTIH++    LR  +LP+A L + A I CS   LS  VVS    F+  LR+ P FFT++
Sbjct: 33  MFTIHIERGNALRRLLLPIANLSNTAQINCSIPCLSF-VVSPRNNFIVVLRIFPAFFTSY 92

Query: 61  QLHPD-GDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQ 120
           Q +P+   N+     K  L+L  TNISNM++++LS+TIY+   +   P++F +P +GYLQ
Sbjct: 93  QFNPNYAGNYTSFHAKLYLRLLHTNISNMFTDELSVTIYLNRFESTIPVRFYEPRSGYLQ 152

Query: 121 YSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALT 180
           +SAL+L+ A+ I + P+D GVF AIRS EF+ I++DL +L  E   I ++ T+  F +L 
Sbjct: 153 FSALLLARARRIPMYPVDMGVFFAIRSDEFLKILTDLRVLSGEYFVIYVSTTKALFKSLR 212

Query: 181 GEVTFTTENKD--CIIGGV-KGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVS--SRN 240
            E+ + T + +   ++GGV  GG   +F+I   P++FF++ +  SK VW F      +R+
Sbjct: 213 REIAYNTRDDENMMVMGGVPTGGARQFFLICPSPLHFFYYTASISKMVWFFIAAENHTRH 272

Query: 241 LLSCCTGLHASYLVCY 251
            LSCC  +HASYLVC+
Sbjct: 273 FLSCCVNIHASYLVCF 287

[Close]

BLAST of CmaCh17G004200 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 6.2e-17
Identity = 78/253 (30.83%), Postives = 126/253 (49.80%), Query Frame = 1


Query: 4   IHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFV-ASLRMLPTFFTTFQL 63
           + ++ ++    A+LPL    D AD+KCS +  S+I+ S  +P +  SL++LP FFT F  
Sbjct: 3   LKLENIHSFSKALLPLQRFNDTADLKCSPKMFSLII-SRHFPLIITSLQILPPFFTNFLC 62

Query: 64  HPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAP--LKFEDPHTGYLQ- 123
                 F+    K    +  +    +YS   SMT+ +   Q L    L+F +P     Q 
Sbjct: 63  QNQIFQFQIP-IKSFYDIMNSMTHRLYS---SMTLSLHPQQPLIQIALQFRNPRVVDDQE 122

Query: 124 --YSALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGA 183
             Y A  LS ++  D+  ID+G+F +I S  F  I  +L    D    +TLT +EVKF  
Sbjct: 123 ALYHAFPLSPSREEDVGEIDYGIFFSIESLVFRFIAIEL---DDFDALVTLTNSEVKFSV 182

Query: 184 LTGEVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLS 243
              ++    E  +CIIGGV+ G+   F + L+P   F  ++  S  +W+FK+  S ++  
Sbjct: 183 NDKDIILYKERDECIIGGVEIGEESRFFVYLNPKVLFRDLAEQSARIWMFKSPRSYSITV 242

Query: 244 CCTGLHASYLVCY 251
              GL+A + V +
Sbjct: 243 APIGLYAQFCVYF 247

[Close]

BLAST of CmaCh17G004200 vs. NCBI nr
Match: gi|700190435|gb|KGN45639.1| (hypothetical protein Csa_6G002330 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 2.0e-15
Identity = 67/209 (32.06%), Postives = 111/209 (53.11%), Query Frame = 1


Query: 19  LATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTFQLHPDGDNFEEHRYKFLL 78
           L+ L +E DI+ S  KLS+++ +    F+A L+M   FF  +       +   ++++F L
Sbjct: 21  LSHLGEEVDIRVSPLKLSLMLPNFSPSFIAGLQMTHEFFNLYI------SDRTYQFRFSL 80

Query: 79  QLFATNISNMYSEDLSMTIYIGGNQRLAP--LKFEDPHTGYLQYSALVLSHAQNIDISPI 138
           + F T +  M  +  S  ++    +RL    L FE+ +    +    +L++  ++D   I
Sbjct: 81  RKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFENNNAKRERRRLKLLAYDLDLD-GDI 140

Query: 139 DFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTGEVTFTTENKDCIIGGV 198
           ++  FV+I S +F  I S+L       VS+T T + V F     E+TF+ E   C+IGGV
Sbjct: 141 EYTTFVSIDSRDFRRIASEL---NSRSVSVTFTNSRVNFFNKNKEITFSKEENQCVIGGV 200

Query: 199 KGGKVFYFIITLHPVYFFFHISYTSKFVW 226
           + G+ F FIIT+HP+ FF  +S  SK VW
Sbjct: 201 EEGEEFRFIITVHPLVFFLDLSSQSKRVW 219

[Close]

BLAST of CmaCh17G004200 vs. NCBI nr
Match: gi|659117585|ref|XP_008458679.1| (PREDICTED: uncharacterized protein LOC103498007 [Cucumis melo])

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-11
Identity = 58/209 (27.75%), Postives = 110/209 (52.63%), Query Frame = 1


Query: 19  LATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTFQLHPDGDNFEEHRYKFLL 78
           L+ L +  DI+ S  KLS+++ +    F+A L++    F  +       +   ++++F +
Sbjct: 21  LSHLGENVDIRVSPLKLSLMLTNFSPSFIAGLQLSHELFNVYV------SDRTYQFRFNI 80

Query: 79  QLFATNISNMYSEDLSMTIYIGGNQRLAP--LKFEDPHTGYLQYSALVLSHAQNIDISPI 138
           + F T +  M     S  ++    +RL    L F+D      + +  +L++  ++    I
Sbjct: 81  RRFYTYMYRMELRGFSSMLFTIDMKRLQTIFLTFQDNKAKRERRTLKLLAYDLDL-YGDI 140

Query: 139 DFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTGEVTFTTENKDCIIGGV 198
           ++  F +I S +F +IVS+        VS+T ++++ +F   + E+ FT E  +C+IGGV
Sbjct: 141 EYTTFFSIDSKDFKHIVSEF---NSRSVSVTFSDSQARFFTRSKEIVFTKEEDECVIGGV 200

Query: 199 KGGKVFYFIITLHPVYFFFHISYTSKFVW 226
           + G+ F FIIT++P+ FF  +S  SK VW
Sbjct: 201 EEGEEFRFIITVNPLVFFLDLSNQSKRVW 219

The following BLAST results are available for this feature:

BLAST of CmaCh17G004200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G004200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K836_CUCSA	1.7e-45	41.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002370 PE=4 SV=1	[more]
A0A0A0K9W8_CUCSA	1.4e-15	32.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1	[more]
A0A0A0K7E0_CUCSA	6.1e-11	26.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1	[more]
A0A0A0KFM5_CUCSA	1.5e-09	28.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1	[more]
A0A0A0KA18_CUCSA	2.2e-08	27.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1	[more]

BLAST of CmaCh17G004200 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh17G004200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778709035\|ref\|XP_011656333.1\|	2.4e-45	41.80	PREDICTED: uncharacterized protein LOC101204354 [Cucumis sativus]	[more]
gi\|659116794\|ref\|XP_008458263.1\|	2.1e-44	41.41	PREDICTED: uncharacterized protein LOC103497731 [Cucumis melo]	[more]
gi\|659117581\|ref\|XP_008458677.1\|	6.2e-17	30.83	PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]	[more]
gi\|700190435\|gb\|KGN45639.1\|	2.0e-15	32.06	hypothetical protein Csa_6G002330 [Cucumis sativus]	[more]
gi\|659117585\|ref\|XP_008458679.1\|	1.0e-11	27.75	PREDICTED: uncharacterized protein LOC103498007 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G004200.1	CmaCh17G004200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 1..177 score: 3.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G004200	Cla001213	Watermelon (97103) v1	cmawmB354
CmaCh17G004200	Csa6G002370	Cucumber (Chinese Long) v2	cmacuB368
CmaCh17G004200	CmoCh08G008900	Cucurbita moschata (Rifu)	cmacmoB377
CmaCh17G004200	Cp4.1LG17g03520	Cucurbita pepo (Zucchini)	cmacpeB378
CmaCh17G004200	CsaV3_6G000410	Cucumber (Chinese Long) v3	cmacucB0440
CmaCh17G004200	Cla97C06G113280	Watermelon (97103) v2	cmawmbB377
CmaCh17G004200	CsGy6G000430	Cucumber (Gy14) v2	cgybcmaB752
CmaCh17G004200	Carg05591	Silver-seed gourd	carcmaB0091

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G004200	CmaCh08G009170	Cucurbita maxima (Rimu)	cmacmaB385

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G004200	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G004200	Wild cucumber (PI 183967)	cmacpiB372
CmaCh17G004200	Melon (DHL92) v3.5.1	cmameB313
CmaCh17G004200	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G004200	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G004200	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G004200	Silver-seed gourd	carcmaB0851
CmaCh17G004200	Melon (DHL92) v3.6.1	cmamedB365
CmaCh17G004200	Wax gourd	cmawgoB0460
CmaCh17G004200	Cucumber (Gy14) v1	cgycmaB0371