CmaCh17G002210 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTAATTATTGAACCAGTTTAGGGGTGTTTTAGTAATTCCGCTCTGCAATCCTTGTATAAAATGGTTCGAGAAACCGGTGGCGTCGGTGCGTATTCTCGCTCGTCTTTCGCTAACAGTCGGAGCAATGAACGAGGCACGTGTTCCGGCGGAAACCACCACCTTCATGACTGATTTTCTGAGACAGTGCGGCGGCTACGGCGTTATAGACGGCGGCTTGGCCACTGAACTGGAACGGCATGGCGCCGATCTTAACGATCCTCTCTGGAGCGCTAAATGCCTCGTCAGTTCCCCTCACATCGTCCGACGGGTACTTTCTTTTATAAATTCTGAGCATAATTAAAATTTATTCTTCTAATTTATATATATATATATATAGAAAAGGAATCTATGCTATGTAAAATAAATAAAAAAATTAAATATATGTATCCGATATAAATTAAATCTATGGTAAATGTCTCTCCTTAATCGATGTTTGACTCTTTTTTTTTTTTGAGTCATTTGTTCGACCTCTGAGGATTCTGTTGACATGACTAAGTTTGGACATGACTTTGATACTATATTAGATGAACACTACTCTTCACAATGATATAATATTGTCTAAGCCCTTATCGCTTTGATTTGTGCTTTCCAAAAAATCTCGTATTAATAGAAATAGTATTATTGGATTATAAACTCAAAATTGCACCGATATATCTCTTAAATTTTTAGACTTCACTTTTTTAAAAAATTAAATTTAACATTAAGTTATATATTAGACTATTAAAATTAGAATAAATTATTTAATTTATTTATTCTCCGGAAGCTTATTTTTCTTTTAATTCTTTATAATAAAGTTCTCATAATTATAAAAAGCTTATGTAAATCACTTTACTTTTTTTCTTTTTTTGAAAAATAGAGCATAAAAACAGAATAATTATCGCATTGAGCTGTATTTTTTTTTCTTTTTTTAAATCACGATTTGCAAATTTAAATAAATTATAATTTAATTTGTTGGTTGTCCATCGTTCTGGGCCGGAGAATGAATGGGCCGTCGTAGGCCCAATATGAAAATAGGGCTCATTTAACCAACAGGTCTCTTGTTCGAACCGTCTCCGCGCCACCTTTTGAAATTAATTAAATTTGTGGTTAAATTGTAAGGTTATCCATAAAATTTGTGGTTGACTTTTTAAAATATCTAATGGACATTTAATTTTTTTTAAGGTTTTATGTTTAGTTTTTTAAGGTTATCCATTAATTAAATTATGGAAGCGTGGTACTCTCTCCTAACGATTAGCAATGATCAGCTAAGCTAATCGGCTTAATATGACAGGTACATTTAGACTACCTTGATGCTGGTGCCAATATCATTACCACAGCATCTTATCAGGTTCTTTTCTTCACCCCATTTCACTGTTTCATAGCTTCTTATTGTTTAAATTTTTGCTACAAATGTTCTTGAATACTTGTTTGGTTATTACTCTAGATTCAAAATGTTAAGAAACCCATGATTTCATTGTGTTTGCAGGCAACAATCCTGGGTTTTGAGGCTAAAGGATTTTCTAGAGATGAAAGTGAAGAATTGCTAAGAAAAAGTGTTGAAATTGCTCTTGAAGCTCGTGAGATCTATCTTGAACGATGTACAAAGGATTCTTGGGATTGGACTGCAAGTGAAAGGAGCTCGACGAGGCTGATTCTTGTAGCCGCCTCGGTCGGCAGCTACGGAGCTTATTTGGCTGATGGGTCTGAATACAGGTGAGCAAAATCTCAGCATAGTCTTAGAATGGACTTCAATGGTTGCAAATTTGAGCTGTGGTTGTACCTTTTTACAGTGGGAAGTATGGTGATTCAGTTACTTTAGAAACACTGAAAGATTTTCACAGGAGAAGGGTGCAGATTTTGGCCAATGCAGGTGCTGACTTGATCGCGTTCGAGACGATTCCGAACAAGTTGGAAGCTCAAGTATGAAAATGGTGTTGGAAACTAGTTGCCATTGTTAGTGTTGGCAGGGTTCCTCCTTGTTTAAGTTCTTTATGCTGTTTATGTGGAATTTGCAGGCATATGCTGAGCTTCTTGATGAAGAGGGCATTGAAATTCCTGCTTGGTTTTCTTTCAACTCCAAGGATGGAATCAATGCGGTGAGTGGGGATTCTATAACTGATTGTGCCTCCATTGCAGATGCTTCGAAGCAAGTTGTTGCTGTGGGAATCAACTGTACTCCTCCCAGATATATTCATGGACTAATCTCGTTGATTCGGGAGGTAAATTCCTCGAATACCCTTTTATGACTTCGGAGTTTGCAAGAGTTGTTCTACGTTCAAGTTGACATAACTTTAATGTAAATTTGAGGATTTCGGAATTAGTGGGTGCACAAATGAAGTCATTTCAATCTCTTGTAACAAGATTTATCAACCAAGTTTTCCATCTGCCTCGGTACTATTAAAGACGAATAGTATTCCTGTAATCACCTACCGCCAGTAGATATTGTCCTCTATGAGCTTTTTCTTCTGGACTTCCCCTCAAGGTTTTAAAATGCATCTACTAGGTAGAGGTTTCGACACTCTTATAAGGAATGCTTCATTCCCCTCTCCAACCGATGTGGGTTCTCACAATCCACCCCCTTGAGGGACCCAGTGTCCTCACTGGCACACTGCCCAGTTTTAGCACTGTTACCATTTGTAATAGCCCACCAATAGCAAATATTGTTCTTTTTGGGCTTTTCCTTTTGGACTTCTCTTCAAGGTTTTAAAACGCATTTACTAGAGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCTCCGAGATCTCACAATCCACCCCCTTAGGGGACCCAACATCCTCGTTGGCACACCGCTCGGTGTCTAGCTCTGATACCAGTTGTAACATCCCATTGCTAGTAGATATTGTCATCTTTGAGCTTTTTCTATGAACTTCTTCTCAAGGTTTTAAAACGTGTCTACTTGAGAAAAGTTTCAACACCCTTATCAGGAATGTTTTGTTCCCCTCTCCAAACGATGTGGGATCTCACAATCCACCCCCTTGGGGGTGCCAGCATCTCAGTGGCACACCGCCCGGTGTCTAGCTCTAATACCATTCGTAATAGCCCACCGCTATTAGATATTGTCCTCTTTGAGTTTTCCCTTCTGAACTTTCTTTCAAAGTTTTAAAACGCATCTACTAGGAAAAGTTTCCACACTCAAATAAAGAATGCTTCATCCCCTCTCTAACCGATGTGGAATCTCACAATCCCCTCCTTTGGGGGACCCAACGTCTTCGCTGGCACACCGCCCAGTGTCTGACTCTGATACCATTTGTAACAGTCTACCGCTAGCATATATTGTCCTCTTTGAGTTTTCCCTTCTAAACTTCACCTTAAGGTTTTAAAACGCATCTACAAGAGAGAGGTTTCCACACCCTTATAAAGAATACTTCGTTCCCCTCTCCAACCGACGTAGGATCTCACAATTCATGTTCGAAAATACTAAGCCATAGCCACCTTTCTTCACTACAAAGGCTTGTGCTAAGCCCCAGTCATAATAATGGACACAAGAGCAGCAGGAGGAACAACATGGAAAGCAGTCTAATAATGGAAAAAGAACATTGAAAGCAGCCCTCAAATATGTTCATATTCTAAGTAAATCTTGTTCTCTAATTGGCAGGTCACTAACAAACCCATTGTGATTTATCCAAACAGCGGGGAGACATATGATGGTGAAACCAAACAGTGGTTGGTGAGTTTTCTACTATTTTTCCTGTGTGTGTTCTTCGAACTTCACGGTTTCGTTCCTTCGTATGCCACAACGGTCGGGTTCCCCCGTCCTCAATCACTTCTTTTATCTTTGCAGCAATCCGATGGAATGACAGGGGAAGACTTCGTATCATATGTAAGTAAGTGGAAGGAAGCAGGAGCCTCTCTGTTTGGCGGATGCTGCCGCACCACTCCAAACACAATCCAAGGCATAGCAAAAGCGCTTTCTTCTAAAGCCTTTTGAGCCGTTTCCCCTTATTAACAAGCTTGGTATGAACTATATCCAATATATCAGCTCTGTTTTAGATTATGGGATGAACATAAATTTTTGTAAATATTAAGGAAAAGAGAGCTGTTCAAGGAATAAGTTGTTCATGTTCAAAGAATACTTGATTTGACTTGGGATCTTTCAATTCAGAGATACATCCATGTCTATGATAAATGATGAAGTTCCCACAAGCGTTTTCATGATGCAATAATTTGAAACTGATAGTGATTGATGGTTTCATTTCTAGCCACCAATTGCAAGTCCTAAGCCCAGAAAGGAACATGAGTAGCCCATATGCTTGAAGACGATAGCAACCAGTACAAGTCTCAAGTCTTTGAGTGGGGATTAAGATATACCAATCTTGTGCTGCTCCCACTTTTGACTGCCTGATTAAATCCTTTGGATTTGGCTTTAGATTCTCTAGGAGGGAAATAGGAGCTTATGTTGTTGGGTTCTGTAACAAATATCATTGATGGCTAAGTCTGGTTGTCTTATTGGGTAGAGCCACGAGGCTTCCATCTATGTTTGAATCTTCTCTTTTTTCATGTAATGTATCAAATAAGTAACAAAGAACTAATTTCTATTGCATGAAGTTGTAACGGTGTGAGCCCACCGTTAGCAGATGTTGTCCTATTTGGGCTTTCCCTCAAAGTTTTTAAAACGCATCTGCTAGAGAGAGGTTTTCACACGCTTATAAAGGGAATTTCATTCTCCTCCCCAACCGATGTCGGATCTCACAATCCACCCCCTTTCAGGGTCCAGTGTCCTCACTGGTACTCGTTTCTTTCTCCAATCGATGTGGGACTCCCACCAAATCCACTTTCCTTTAGAGCTCAGCGTTCTTACTGGCACACCGCCTCATGTCTACCCTCCTTCGGGGAACAGCCTCCTCGCTGGTACATCGCCCGGATATGATTTGTAACGACTTATGCCTACCGCTAATAGATATTCTCCTCTTT GGTAATTATTGAACCAGTTTAGGGGTGTTTTAGTAATTCCGCTCTGCAATCCTTGTATAAAATGGTTCGAGAAACCGGTGGCGTCGGTGCGTATTCTCGCTCGTCTTTCGCTAACAGTCGGAGCAATGAACGAGGCACGTGTTCCGGCGGAAACCACCACCTTCATGACTGATTTTCTGAGACAGTGCGGCGGCTACGGCGTTATAGACGGCGGCTTGGCCACTGAACTGGAACGGCATGGCGCCGATCTTAACGATCCTCTCTGGAGCGCTAAATGCCTCGTCAGTTCCCCTCACATCGTCCGACGGGTACATTTAGACTACCTTGATGCTGGTGCCAATATCATTACCACAGCATCTTATCAGGCAACAATCCTGGGTTTTGAGGCTAAAGGATTTTCTAGAGATGAAAGTGAAGAATTGCTAAGAAAAAGTGTTGAAATTGCTCTTGAAGCTCGTGAGATCTATCTTGAACGATGTACAAAGGATTCTTGGGATTGGACTGCAAGTGAAAGGAGCTCGACGAGGCTGATTCTTGTAGCCGCCTCGGTCGGCAGCTACGGAGCTTATTTGGCTGATGGGTCTGAATACAGTGGGAAGTATGGTGATTCAGTTACTTTAGAAACACTGAAAGATTTTCACAGGAGAAGGGTGCAGATTTTGGCCAATGCAGGTGCTGACTTGATCGCGTTCGAGACGATTCCGAACAAGTTGGAAGCTCAAGCATATGCTGAGCTTCTTGATGAAGAGGGCATTGAAATTCCTGCTTGGTTTTCTTTCAACTCCAAGGATGGAATCAATGCGGTGAGTGGGGATTCTATAACTGATTGTGCCTCCATTGCAGATGCTTCGAAGCAAGTTGTTGCTGTGGGAATCAACTGTACTCCTCCCAGATATATTCATGGACTAATCTCGTTGATTCGGGAGGTCACTAACAAACCCATTGTGATTTATCCAAACAGCGGGGAGACATATGATGGTGAAACCAAACAGTGGTTGCAATCCGATGGAATGACAGGGGAAGACTTCGTATCATATGTAAGTAAGTGGAAGGAAGCAGGAGCCTCTCTGTTTGGCGGATGCTGCCGCACCACTCCAAACACAATCCAAGGCATAGCAAAAGCGCTTTCTTCTAAAGCCTTTTGAGCCGTTTCCCCTTATTAACAAGCTTGCCACCAATTGCAAGTCCTAAGCCCAGAAAGGAACATGAGTAGCCCATATGCTTGAAGACGATAGCAACCAGTACAAGTCTCAAGTCTTTGAGTGGGGATTAAGATATACCAATCTTGTGCTGCTCCCACTTTTGACTGCCTGATTAAATCCTTTGGATTTGGCTTTAGATTCTCTAGGAGGGAAATAGGAGCTTATGTTGTTGGGTTCTGTAACAAATATCATTGATGGCTAAGTCTGGTTGTCTTATTGGGTAGAGCCACGAGGCTTCCATCTATGTTTGAATCTTCTCTTTTTTCATGTAATGTATCAAATAAGTAACAAAGAACTAATTTCTATTGCATGAAGTTGTAACGGTGTGAGCCCACCGTTAGCAGATGTTGTCCTATTTGGGCTTTCCCTCAAAGTTTTTAAAACGCATCTGCTAGAGAGAGGTTTTCACACGCTTATAAAGGGAATTTCATTCTCCTCCCCAACCGATGTCGGATCTCACAATCCACCCCCTTTCAGGGTCCAGTGTCCTCACTGGTACTCGTTTCTTTCTCCAATCGATGTGGGACTCCCACCAAATCCACTTTCCTTTAGAGCTCAGCGTTCTTACTGGCACACCGCCTCATGTCTACCCTCCTTCGGGGAACAGCCTCCTCGCTGGTACATCGCCCGGATATGATTTGTAACGACTTATGCCTACCGCTAATAGATATTCTCCTCTTT ATGAACGAGGCACGTGTTCCGGCGGAAACCACCACCTTCATGACTGATTTTCTGAGACAGTGCGGCGGCTACGGCGTTATAGACGGCGGCTTGGCCACTGAACTGGAACGGCATGGCGCCGATCTTAACGATCCTCTCTGGAGCGCTAAATGCCTCGTCAGTTCCCCTCACATCGTCCGACGGGTACATTTAGACTACCTTGATGCTGGTGCCAATATCATTACCACAGCATCTTATCAGGCAACAATCCTGGGTTTTGAGGCTAAAGGATTTTCTAGAGATGAAAGTGAAGAATTGCTAAGAAAAAGTGTTGAAATTGCTCTTGAAGCTCGTGAGATCTATCTTGAACGATGTACAAAGGATTCTTGGGATTGGACTGCAAGTGAAAGGAGCTCGACGAGGCTGATTCTTGTAGCCGCCTCGGTCGGCAGCTACGGAGCTTATTTGGCTGATGGGTCTGAATACAGTGGGAAGTATGGTGATTCAGTTACTTTAGAAACACTGAAAGATTTTCACAGGAGAAGGGTGCAGATTTTGGCCAATGCAGGTGCTGACTTGATCGCGTTCGAGACGATTCCGAACAAGTTGGAAGCTCAAGCATATGCTGAGCTTCTTGATGAAGAGGGCATTGAAATTCCTGCTTGGTTTTCTTTCAACTCCAAGGATGGAATCAATGCGGTGAGTGGGGATTCTATAACTGATTGTGCCTCCATTGCAGATGCTTCGAAGCAAGTTGTTGCTGTGGGAATCAACTGTACTCCTCCCAGATATATTCATGGACTAATCTCGTTGATTCGGGAGGTCACTAACAAACCCATTGTGATTTATCCAAACAGCGGGGAGACATATGATGGTGAAACCAAACAGTGGTTGCAATCCGATGGAATGACAGGGGAAGACTTCGTATCATATGTAAGTAAGTGGAAGGAAGCAGGAGCCTCTCTGTTTGGCGGATGCTGCCGCACCACTCCAAACACAATCCAAGGCATAGCAAAAGCGCTTTCTTCTAAAGCCTTTTGA MNEARVPAETTTFMTDFLRQCGGYGVIDGGLATELERHGADLNDPLWSAKCLVSSPHIVRRVHLDYLDAGANIITTASYQATILGFEAKGFSRDESEELLRKSVEIALEAREIYLERCTKDSWDWTASERSSTRLILVAASVGSYGAYLADGSEYSGKYGDSVTLETLKDFHRRRVQILANAGADLIAFETIPNKLEAQAYAELLDEEGIEIPAWFSFNSKDGINAVSGDSITDCASIADASKQVVAVGINCTPPRYIHGLISLIREVTNKPIVIYPNSGETYDGETKQWLQSDGMTGEDFVSYVSKWKEAGASLFGGCCRTTPNTIQGIAKALSSKAF
BLAST of CmaCh17G002210 vs. Swiss-Prot
Match: HMT3_ARATH (Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3 PE=1 SV=2) HSP 1 Score: 505.4 bits (1300), Expect = 4.9e-142 Identity = 238/332 (71.69%), Postives = 283/332 (85.24%), Query Frame = 1
BLAST of CmaCh17G002210 vs. Swiss-Prot
Match: HMT2_ARATH (Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2 PE=1 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 1.5e-130 Identity = 226/325 (69.54%), Postives = 272/325 (83.69%), Query Frame = 1
BLAST of CmaCh17G002210 vs. Swiss-Prot
Match: SMTA_BRAOT (Selenocysteine Se-methyltransferase OS=Brassica oleracea var. italica GN=SMT PE=1 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 2.2e-129 Identity = 227/330 (68.79%), Postives = 273/330 (82.73%), Query Frame = 1
BLAST of CmaCh17G002210 vs. Swiss-Prot
Match: SMTA_ASTBI (Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA PE=1 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 2.0e-127 Identity = 224/328 (68.29%), Postives = 267/328 (81.40%), Query Frame = 1
BLAST of CmaCh17G002210 vs. Swiss-Prot
Match: HMT2_MAIZE (Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 3.7e-121 Identity = 215/314 (68.47%), Postives = 261/314 (83.12%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TrEMBL
Match: A0A0A0LKT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G223160 PE=4 SV=1) HSP 1 Score: 592.4 bits (1526), Expect = 3.4e-166 Identity = 288/335 (85.97%), Postives = 312/335 (93.13%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TrEMBL
Match: W9QQW0_9ROSA (Homocysteine S-methyltransferase 3 OS=Morus notabilis GN=L484_009098 PE=4 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 5.7e-153 Identity = 261/328 (79.57%), Postives = 296/328 (90.24%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TrEMBL
Match: V4S391_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005328mg PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 2.2e-152 Identity = 259/329 (78.72%), Postives = 300/329 (91.19%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TrEMBL
Match: B9RTM3_RICCO (5-methyltetrahydrofolate:homocysteine methyltransferase, putative OS=Ricinus communis GN=RCOM_0911480 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 3.2e-148 Identity = 253/329 (76.90%), Postives = 291/329 (88.45%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TrEMBL
Match: A0A067L836_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02212 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 4.6e-147 Identity = 252/330 (76.36%), Postives = 293/330 (88.79%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TAIR10
Match: AT3G22740.1 (AT3G22740.1 homocysteine S-methyltransferase 3) HSP 1 Score: 505.4 bits (1300), Expect = 2.8e-143 Identity = 238/332 (71.69%), Postives = 283/332 (85.24%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TAIR10
Match: AT3G63250.1 (AT3G63250.1 homocysteine methyltransferase 2) HSP 1 Score: 467.2 bits (1201), Expect = 8.4e-132 Identity = 226/325 (69.54%), Postives = 272/325 (83.69%), Query Frame = 1
BLAST of CmaCh17G002210 vs. TAIR10
Match: AT3G25900.1 (AT3G25900.1 Homocysteine S-methyltransferase family protein) HSP 1 Score: 373.6 bits (958), Expect = 1.3e-103 Identity = 177/327 (54.13%), Postives = 238/327 (72.78%), Query Frame = 1
BLAST of CmaCh17G002210 vs. NCBI nr
Match: gi|659096876|ref|XP_008449335.1| (PREDICTED: homocysteine S-methyltransferase 3 [Cucumis melo]) HSP 1 Score: 593.2 bits (1528), Expect = 2.9e-166 Identity = 285/335 (85.07%), Postives = 315/335 (94.03%), Query Frame = 1
BLAST of CmaCh17G002210 vs. NCBI nr
Match: gi|449455288|ref|XP_004145385.1| (PREDICTED: homocysteine S-methyltransferase 3 [Cucumis sativus]) HSP 1 Score: 592.4 bits (1526), Expect = 4.9e-166 Identity = 288/335 (85.97%), Postives = 312/335 (93.13%), Query Frame = 1
BLAST of CmaCh17G002210 vs. NCBI nr
Match: gi|703084222|ref|XP_010092416.1| (Homocysteine S-methyltransferase 3 [Morus notabilis]) HSP 1 Score: 548.5 bits (1412), Expect = 8.1e-153 Identity = 261/328 (79.57%), Postives = 296/328 (90.24%), Query Frame = 1
BLAST of CmaCh17G002210 vs. NCBI nr
Match: gi|567853760|ref|XP_006420000.1| (hypothetical protein CICLE_v10005328mg [Citrus clementina]) HSP 1 Score: 546.6 bits (1407), Expect = 3.1e-152 Identity = 259/329 (78.72%), Postives = 300/329 (91.19%), Query Frame = 1
BLAST of CmaCh17G002210 vs. NCBI nr
Match: gi|1009141360|ref|XP_015888153.1| (PREDICTED: homocysteine S-methyltransferase 3 [Ziziphus jujuba]) HSP 1 Score: 538.9 bits (1387), Expect = 6.4e-150 Identity = 261/330 (79.09%), Postives = 291/330 (88.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |