CmaCh16G009700 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G009700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cytoplasmic tRNA 2-thiolation protein 1
Location	Cma_Chr16 : 7475423 .. 7477490 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCACCATTGAATTGAAGTCGGTAAGATCCAATTGGATTATAAACTTATTCGAATTAAATTAAGTTCGCTTATTATTTCCACAAAGATAATTTTATGTTTTTTTTTTAATTATTTATTTTCTAACCCATCTTAAAAATAAATTTAAGGAATGTAATTTTTTAAATATATATTTAAATTGGATGGCAAACTTAATTAAATATTTAAAAATAAATAAATACATATTTTATAAATTAAAATTTTACTTTTATTAGAAATAAAATTCATAGAGCAGAGAGATTTCGAATGAGAGTTTTGAAAGCAAGATTGAAATGGGTGTTATATGTGATGCAAGCAAAAAGGCGACAACAACGACTTACAACATATAACTATTGGGTAGGGAGAAGTTGACAACTAGTCATATCCCCTATAGTACATTTTGGGGCATTTTTGCCGAAACGAGTCTACATGTGATTCTCGTGAATGGTCGTATACCCCCGTATTGAGCCAATATGAAATGGTAAATGGTTATCTAAGATGAAAGTATGAAAAAAGGGGTTTGGAACGGGCATGCAACCATAGACAACACGCCTTGGACAAGCATGACCGTGACATTCTCCCCCACTCAATTGGTTGACGTCCCTGTCAACCGACTTGAACAAGCAAGACTGGGACATATGTCATGCAGCCTTAAGCAAAATGCTTTGGACAAGCATGACTGCGACATTCTCCCTATCAACCGACTTAGACAAGCAAGATTGGGACATATGTCATGCGGCCATAGGCAACATGCTTTGGACAAGCATGACCGTGACATCCTCCCCCACTCAATTGGTTGACGTCTCTGTCAACCGACTCGAACAAGCAAAACTGCAACATCTGTCATGCTGCCATAAGCAAAATGCTTTGGACAAGCATGACCGTGACATTCTCCCTGTCAACCGACTTAGACAAGCAAGATTGAGACATATGTCATGTGGCCATACGCAATATGCTTTGGACAAGCATGACCGTGACATCCTCCCTCACTCAATTGGTTGACATCTCTGTCAACCGACTCTTTACAACTATGTGTTGTAGGCTGAGGTTGACTTTTAGGTCTCTTCAATGTGCTTCCAGTTGACTTCAATGTTGCGGAGTCTCGTTAAATCTGTAAGGAGCAGTTGAAAACTGTTTCTTGGTTCGTTGGCTCTTGACGTCTCCTCCATCAAAAAAAATTTGAATAATTGAATTTGATCTAAAAAATATTTCAACCCGACTCATCCCAACTTAACTCACGAACACTCTACCCTTAACAAATATGCTAATTTACGAAACAACGTGTTGGACGTTATTCAAGGTCACCCGATTCAAGTGGGTGGATCGAACGCTCTCTAAGATATTTTGAAATGGGAATATTATTACTTTTATTGGAAGATTCATGAAACATTTGGTGGCATAAATGAGCGTTGAAACCGGAAATAAATATCAGTGTATATCAATGGGCCGATGGGATAGTTTCATAAGGTAGCACAAAACAATGGGCTAACGTGGCTTCTCTAATACCCACTCCAAGAAAGTTCTAGCACCAAATGGCATTTAACCCACTCAATTGGTAACGATTGTTTGCCTTTTTCCGCAAGAAAATTCCATGTATTCCCATGATTCCAACGCCCTATATATATACTTGGAATTGCTCTGTTTTCTGCACAGCCAAGCCAGGTGAAACAAGAACCAAGAAGAACAAAAAGCTTTCATCTCCTTATTCTTCCCTCGAAAATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTGACAGAGAAGCAACATCGCAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGAAGGTAAATTGGATTTGCTTCTCAAACAATATGGACTCCGTTTTGAAGGTACCCTTGAGGAGAAAAGGGCATTCGCTATTGGCACGTTCTTGTGGCCTGACCAACTTTGA

mRNA sequence

ATGTGCACCATTGAATTGAAGTCGCCAAGCCAGGTGAAACAAGAACCAAGAAGAACAAAAAGCTTTCATCTCCTTATTCTTCCCTCGAAAATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTGACAGAGAAGCAACATCGCAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGAAGGTAAATTGGATTTGCTTCTCAAACAATATGGACTCCGTTTTGAAGGTACCCTTGAGGAGAAAAGGGCATTCGCTATTGGCACGTTCTTGTGGCCTGACCAACTTTGA

Coding sequence (CDS)

ATGTGCACCATTGAATTGAAGTCGCCAAGCCAGGTGAAACAAGAACCAAGAAGAACAAAAAGCTTTCATCTCCTTATTCTTCCCTCGAAAATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTGACAGAGAAGCAACATCGCAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGAAGGTAAATTGGATTTGCTTCTCAAACAATATGGACTCCGTTTTGAAGGTACCCTTGAGGAGAAAAGGGCATTCGCTATTGGCACGTTCTTGTGGCCTGACCAACTTTGA

Protein sequence

MCTIELKSPSQVKQEPRRTKSFHLLILPSKMGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL

Homology

[Close]

BLAST of CmaCh16G009700 vs. TrEMBL
Match: A0A0A0L4U1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047750 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-48
Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAG-EGIKNVEQVKEAEDCFYGG-LNFESGFQMP 90
           MGLKWILNSAFTQVLGLTEKQ +NQ EAG EGIKNVEQVKE  DCFYGG LNF+SGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGDLNFQSGFQMP 60

Query: 91  LHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           LHYPRYTK DYE+MEEGKLDLLLKQYGL F+GTLEEKRAFAIGTF+WPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFIWPDQL 111

[Close]

BLAST of CmaCh16G009700 vs. TrEMBL
Match: W9R1F4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018236 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-24
Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIK-----NVEQVKEAEDCFYGGLNFESGF 90
           M LKW LNS FT VLG T+     +   G GIK     NV  V   ++       + +GF
Sbjct: 1   MALKWFLNSTFTHVLGHTQNVGMIE---GSGIKEGKERNVSMVSICKE------EYPNGF 60

Query: 91  QMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           QMPLHYP+Y KADYEKMEE KLDLLLK+YG + +G+LEEKR FA G FLWPDQL
Sbjct: 61  QMPLHYPKYNKADYEKMEECKLDLLLKEYGFKVKGSLEEKRQFAGGAFLWPDQL 105

[Close]

BLAST of CmaCh16G009700 vs. TrEMBL
Match: A0A061F567_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030662 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVE-QVKEAEDCFYGGL---------N 90
           M LKW+L+SAFTQV GL E     Q +A  G  NV   VK  ++   GG+         +
Sbjct: 1   MALKWLLSSAFTQVFGLAEGGSL-QTKAVVGCPNVHGSVKGCKETD-GGVACSIKISKED 60

Query: 91  FESGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           + +GFQMP+HYPRY+K+DYE+MEE ++D+LLK+YG  F+G+++EKRAFA+G FLWPDQL
Sbjct: 61  YPNGFQMPVHYPRYSKSDYEQMEEWRVDMLLKEYGFSFQGSVDEKRAFAMGAFLWPDQL 117

[Close]

BLAST of CmaCh16G009700 vs. TrEMBL
Match: B9S9U6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522400 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1


Query: 33  LKWILNSAFTQVLG------LTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQ 92
           LKW L+SAFTQV G      +T  Q           + V  +KEA        ++  GFQ
Sbjct: 4   LKWFLSSAFTQVFGHMDTGTITTVQRNEVTACPNNQECVSNLKEAR--MMKKEDYPGGFQ 63

Query: 93  MPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           +PLHYPRY+KADYEKME+ +LD+LL +YGL F+GTL+EKRAFA+G+FLWPDQL
Sbjct: 64  VPLHYPRYSKADYEKMEDWRLDMLLNEYGLCFKGTLDEKRAFAMGSFLWPDQL 114

[Close]

BLAST of CmaCh16G009700 vs. TrEMBL
Match: A0A0D2V2C9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449300 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.6e-23
Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQ-------NEAGEGIKNVE----QVKEAEDCFYGGL 90
           M LKW L+SAFTQV G T+  + +        NE   G K +E     +K  ++      
Sbjct: 1   MALKWFLSSAFTQVFGHTDGGNLHAKAVVSCPNEGLIGCKEMEGGITSIKTCKE------ 60

Query: 91  NFESGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFE-GTLEEKRAFAIGTFLWPDQ 140
           ++ +GFQMP+HYPRY+KADYEKMEE ++D+LLK+YG  F  GT++EKRAFAIG FLWPDQ
Sbjct: 61  DYPNGFQMPVHYPRYSKADYEKMEEWRIDMLLKEYGFSFNGGTVDEKRAFAIGAFLWPDQ 115

[Close]

BLAST of CmaCh16G009700 vs. TAIR10
Match: AT5G55620.1 (AT5G55620.1 unknown protein)

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-24
Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLH 90
           M +K +  SAFTQ+ G +    +  N      K ++ +K+ E        F SGFQ+PLH
Sbjct: 1   MEMKLLFTSAFTQMFGYSNHMDQASNCQSTRNKIIKMMKKEE--------FPSGFQVPLH 60

Query: 91  YPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           YP+Y+K+DYE M++ +LDLLLKQYG  FEG+LE+KR FAI +FLWPDQL
Sbjct: 61  YPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWPDQL 101

[Close]

BLAST of CmaCh16G009700 vs. TAIR10
Match: AT3G09950.1 (AT3G09950.1 unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-17
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 1


Query: 83  SGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLR--FEGTLEEKRAFAIGTFLWP 137
           SGF+MPLHYPRYTK DYE+MEE +LDLLL +YGL    + TL EKRAFAI TF+WP
Sbjct: 34  SGFKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKRAFAIDTFIWP 89

[Close]

BLAST of CmaCh16G009700 vs. TAIR10
Match: AT5G41761.1 (AT5G41761.1 unknown protein)

HSP 1 Score: 81.6 bits (200), Expect = 4.1e-16
Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLH 90
           MG+K+    + T +       H   ++ GE  +N    K   D      N  S FQ+PLH
Sbjct: 1   MGIKFSQGPSNTTI-------HNRSHQDGEDQRNETATKINHD---KPQNQSSSFQIPLH 60

Query: 91  YPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQ 139
           YP+YTK+DYEKM E +LD LL++YGL   G   EKR FAIG FLW  +
Sbjct: 61  YPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLWSSE 98

[Close]

BLAST of CmaCh16G009700 vs. TAIR10
Match: AT3G55570.1 (AT3G55570.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.5e-13
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1


Query: 83  SGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLW 136
           S F+MPLHYPRY+K DY+ M E KLD +L  YGL   G L  KR FAIG FLW
Sbjct: 30  SVFRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLW 82

[Close]

BLAST of CmaCh16G009700 vs. TAIR10
Match: AT3G11405.1 (AT3G11405.1 unknown protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 1


Query: 78  GLNFESGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFE-GTLEEKRAFAIGTFLW 136
           G +  S FQMPL YP Y K  Y+ M E +LD LLK YGL  + G L  K+ FA+G FLW
Sbjct: 50  GSSSPSSFQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

[Close]

BLAST of CmaCh16G009700 vs. NCBI nr
Match: gi|778675785|ref|XP_011650470.1| (PREDICTED: uncharacterized protein LOC105434788 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-48
Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAG-EGIKNVEQVKEAEDCFYGG-LNFESGFQMP 90
           MGLKWILNSAFTQVLGLTEKQ +NQ EAG EGIKNVEQVKE  DCFYGG LNF+SGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGDLNFQSGFQMP 60

Query: 91  LHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           LHYPRYTK DYE+MEEGKLDLLLKQYGL F+GTLEEKRAFAIGTF+WPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFIWPDQL 111

[Close]

BLAST of CmaCh16G009700 vs. NCBI nr
Match: gi|659096309|ref|XP_008449025.1| (PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 3.8e-48
Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAG-EGIKNVEQVKEAEDCFY-GGLNFESGFQMP 90
           MGLKWILNSAFTQVLGLTEK  +NQ EAG EGIKNVEQVKE  DCFY GGLNFESGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKLQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60

Query: 91  LHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           LHYPRYTK DYE+MEEGKLDLLLKQYGL F+GTLEEKRAFAIGTFLWPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFLWPDQL 111

[Close]

BLAST of CmaCh16G009700 vs. NCBI nr
Match: gi|703069292|ref|XP_010088463.1| (hypothetical protein L484_018236 [Morus notabilis])

HSP 1 Score: 119.0 bits (297), Expect = 6.5e-24
Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIK-----NVEQVKEAEDCFYGGLNFESGF 90
           M LKW LNS FT VLG T+     +   G GIK     NV  V   ++       + +GF
Sbjct: 1   MALKWFLNSTFTHVLGHTQNVGMIE---GSGIKEGKERNVSMVSICKE------EYPNGF 60

Query: 91  QMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           QMPLHYP+Y KADYEKMEE KLDLLLK+YG + +G+LEEKR FA G FLWPDQL
Sbjct: 61  QMPLHYPKYNKADYEKMEECKLDLLLKEYGFKVKGSLEEKRQFAGGAFLWPDQL 105

[Close]

BLAST of CmaCh16G009700 vs. NCBI nr
Match: gi|590605598|ref|XP_007020528.1| (Uncharacterized protein TCM_030662 [Theobroma cacao])

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-23
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 1


Query: 31  MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVE-QVKEAEDCFYGGL---------N 90
           M LKW+L+SAFTQV GL E     Q +A  G  NV   VK  ++   GG+         +
Sbjct: 1   MALKWLLSSAFTQVFGLAEGGSL-QTKAVVGCPNVHGSVKGCKETD-GGVACSIKISKED 60

Query: 91  FESGFQMPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           + +GFQMP+HYPRY+K+DYE+MEE ++D+LLK+YG  F+G+++EKRAFA+G FLWPDQL
Sbjct: 61  YPNGFQMPVHYPRYSKSDYEQMEEWRVDMLLKEYGFSFQGSVDEKRAFAMGAFLWPDQL 117

[Close]

BLAST of CmaCh16G009700 vs. NCBI nr
Match: gi|1000957841|ref|XP_015577028.1| (PREDICTED: uncharacterized protein LOC8286850 [Ricinus communis])

HSP 1 Score: 116.7 bits (291), Expect = 3.2e-23
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1


Query: 33  LKWILNSAFTQVLG------LTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQ 92
           LKW L+SAFTQV G      +T  Q           + V  +KEA        ++  GFQ
Sbjct: 4   LKWFLSSAFTQVFGHMDTGTITTVQRNEVTACPNNQECVSNLKEAR--MMKKEDYPGGFQ 63

Query: 93  MPLHYPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 140
           +PLHYPRY+KADYEKME+ +LD+LL +YGL F+GTL+EKRAFA+G+FLWPDQL
Sbjct: 64  VPLHYPRYSKADYEKMEDWRLDMLLNEYGLCFKGTLDEKRAFAMGSFLWPDQL 114

The following BLAST results are available for this feature:

BLAST of CmaCh16G009700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G009700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4U1_CUCSA	1.6e-48	88.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047750 PE=4 SV=1	[more]
W9R1F4_9ROSA	4.5e-24	56.14	Uncharacterized protein OS=Morus notabilis GN=L484_018236 PE=4 SV=1	[more]
A0A061F567_THECC	1.0e-23	52.10	Uncharacterized protein OS=Theobroma cacao GN=TCM_030662 PE=4 SV=1	[more]
B9S9U6_RICCO	2.3e-23	53.10	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522400 PE=4 SV=1	[more]
A0A0D2V2C9_GOSRA	6.6e-23	51.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G449300 PE=4 SV=1	[more]

BLAST of CmaCh16G009700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55620.1	3.1e-24	49.54	unknown protein	[more]
AT3G09950.1	1.7e-17	71.43	unknown protein	[more]
AT5G41761.1	4.1e-16	42.59	unknown protein	[more]
AT3G55570.1	5.5e-13	62.26	unknown protein	[more]
AT3G11405.1	2.6e-10	52.54	unknown protein	[more]

BLAST of CmaCh16G009700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778675785\|ref\|XP_011650470.1\|	2.2e-48	88.29	PREDICTED: uncharacterized protein LOC105434788 [Cucumis sativus]	[more]
gi\|659096309\|ref\|XP_008449025.1\|	3.8e-48	89.19	PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo]	[more]
gi\|703069292\|ref\|XP_010088463.1\|	6.5e-24	56.14	hypothetical protein L484_018236 [Morus notabilis]	[more]
gi\|590605598\|ref\|XP_007020528.1\|	1.5e-23	52.10	Uncharacterized protein TCM_030662 [Theobroma cacao]	[more]
gi\|1000957841\|ref\|XP_015577028.1\|	3.2e-23	53.10	PREDICTED: uncharacterized protein LOC8286850 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G009700.1	CmaCh16G009700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33513	FAMILY NOT NAMED	coord: 23..138 score: 7.4
None	No IPR available	PANTHER	PTHR33513:SF2	SUBFAMILY NOT NAMED	coord: 23..138 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G009700	Cucsa.041960	Cucumber (Gy14) v1	cgycmaB0029
CmaCh16G009700	Cla004456	Watermelon (97103) v1	cmawmB294
CmaCh16G009700	Csa3G047750	Cucumber (Chinese Long) v2	cmacuB327
CmaCh16G009700	MELO3C014099	Melon (DHL92) v3.5.1	cmameB290
CmaCh16G009700	ClCG10G004220	Watermelon (Charleston Gray)	cmawcgB285
CmaCh16G009700	CSPI03G04040	Wild cucumber (PI 183967)	cmacpiB333
CmaCh16G009700	CmoCh16G010120	Cucurbita moschata (Rifu)	cmacmoB323
CmaCh16G009700	Lsi05G004910	Bottle gourd (USVL1VR-Ls)	cmalsiB317
CmaCh16G009700	Cp4.1LG14g07920	Cucurbita pepo (Zucchini)	cmacpeB345
CmaCh16G009700	MELO3C014099.2	Melon (DHL92) v3.6.1	cmamedB343
CmaCh16G009700	CsaV3_3G004040	Cucumber (Chinese Long) v3	cmacucB0381
CmaCh16G009700	Cla97C10G188690	Watermelon (97103) v2	cmawmbB338
CmaCh16G009700	Bhi11G000357	Wax gourd	cmawgoB0419
CmaCh16G009700	Carg26824	Silver-seed gourd	carcmaB0005

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G009700	Cucurbita maxima (Rimu)	cmacmaB354
CmaCh16G009700	Cucurbita moschata (Rifu)	cmacmoB341
CmaCh16G009700	Cucurbita pepo (Zucchini)	cmacpeB365
CmaCh16G009700	Cucumber (Gy14) v2	cgybcmaB340
CmaCh16G009700	Silver-seed gourd	carcmaB0012