Carg26824 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTTACAGAGAAGCAACAACACAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGTCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGACGGTAAATTGGATTTGCTTCTGAAACAATATGGACTCCGTTTTGAAGGTACCCTTGAGGAGAAAAGGGCATTTGCTATTGGCACGTTCTTGTGGCCTGACCAACTTTGAGTTTGCCCACCAGGTGTTTGATGAAAGTCCCCAATGAAAAAACTAGCTAACTTTTGATGTTTGCTGTTTGTATAGCTACTTTATGGATGTGATGTTAGATTAAGATGCAGAGATATTAGTAGCTGTGTCTTTGTTTGGCTGTATGTACTGATCTTGGTGGGATTTTAGTGCATCTTGTAAAAAACTAGTTACATATAATGGTATATTAATCACCCTTTTCTACTGAGTCCATGATTTTTCTTTGCAAAACAAGTATAATCTAGTAAAAGAAACAGGGAGAATTTGGTGTGTTCTTCAAGAAAACAAGGAAGAGAAGCTATGAATGTAGTGTCCATTCATAGTCTCTCACATAATTGTACAACATCTCTGATTGTTGTTATTATCTTGGCTGGGTTCCTCAGGGGCTGGATTACCAGGTGGCCCGCCCGGCCCTATCATTGGCCATGGGACAGGCTGCGGCTGTGGCTGTGGCAGCATGAACTGCCAAGGGTATGGCTGCGGCGGCAGCGGTGGTTGTTGGGGGTAAGATGTGTCAAACCAGCGAGATTGTTCTTGGGAATTCTGATAAGAATGATGAATGGGATCATCTCCATAAGGGTAATATCTTCTATCTCCAGCTTCACCGTCAAATCTTATACTTTTAACCTCTGCATGTTTGCCTGACTTTTCAATCACTTTCAGGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGACCCATCATCTGAATCCATTGTGATGGTGTAAATACCTGGGAATCAAAAACAATGAAGAACAATGAAGAACAATGAAGAACATGAAGAACAATGAGGTAAAGAGAGAAACCATAGATGTTCTGTAGAATCTCTTGGACTTTTGCTGTGCATGCTTCACATTGAATACTTGCACTAAGAACACAACTCTGCAACAAAGTGAAAATGTTTTAGGTTTAGAAGAACATGAAAAGCAAAGAAAAGGGCGTCTGTTTATGGAGTGAA ATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTTACAGAGAAGCAACAACACAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGTCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGACGGTAAATTGGATTTGCTTCTGAAACAATATGGACTCCGTTTTGAAGGGGCTGGATTACCAGGTGGCCCGCCCGGCCCTATCATTGGCCATGGGACAGGCTGCGGCTGTGGCTGTGGCAGCATGAACTGCCAAGGGTATGGCTGCGGCGGCAGCGGTGGTTGTTGGGGGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGACCCATCATCTGAATCCATTGTGATGGTGTAAATACCTGGGAATCAAAAACAATGAAGAACAATGAAGAACAATGAAGAACATGAAGAACAATGAGGTAAAGAGAGAAACCATAGATGTTCTGTAGAATCTCTTGGACTTTTGCTGTGCATGCTTCACATTGAATACTTGCACTAAGAACACAACTCTGCAACAAAGTGAAAATGTTTTAGGTTTAGAAGAACATGAAAAGCAAAGAAAAGGGCGTCTGTTTATGGAGTGAA ATGGGGTTGAAGTGGATTCTGAATTCCGCTTTCACTCAAGTTCTAGGGCTTACAGAGAAGCAACAACACAATCAGAACGAGGCGGGAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGTCGGAAGATTGTTTTTATGGAGGTTTGAATTTTGAAAGTGGGTTTCAAATGCCTCTCCATTATCCCAGGTACACGAAGGCGGATTATGAGAAAATGGAAGACGGTAAATTGGATTTGCTTCTGAAACAATATGGACTCCGTTTTGAAGGGGCTGGATTACCAGGTGGCCCGCCCGGCCCTATCATTGGCCATGGGACAGGCTGCGGCTGTGGCTGTGGCAGCATGAACTGCCAAGGGTATGGCTGCGGCGGCAGCGGTGGTTGTTGGGGGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGACCCATCATCTGAATCCATTGTGATGGTGTAA MGLKWILNSAFTQVLGLTEKQQHNQNEAGEGIKNVEQVKESEDCFYGGLNFESGFQMPLHYPRYTKADYEKMEDGKLDLLLKQYGLRFEGAGLPGGPPGPIIGHGTGCGCGCGSMNCQGYGCGGSGGCWGNVLGFTLPQILTDPSSESIVMV
BLAST of Carg26824 vs. NCBI nr
Match: XP_022932392.1 (uncharacterized protein LOC111438758 [Cucurbita moschata]) HSP 1 Score: 188.3 bits (477), Expect = 1.9e-44 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_022965232.1 (uncharacterized protein LOC111465146 [Cucurbita maxima]) HSP 1 Score: 182.6 bits (462), Expect = 1.0e-42 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_023553399.1 (uncharacterized protein LOC111810825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.0 bits (458), Expect = 3.0e-42 Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_011650470.1 (PREDICTED: uncharacterized protein LOC105434788 [Cucumis sativus] >KGN56014.1 hypothetical protein Csa_3G047750 [Cucumis sativus]) HSP 1 Score: 161.8 bits (408), Expect = 1.9e-36 Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of Carg26824 vs. NCBI nr
Match: XP_008449025.1 (PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo]) HSP 1 Score: 160.2 bits (404), Expect = 5.4e-36 Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg26824 vs. TAIR10
Match: AT5G55620.1 (unknown protein) HSP 1 Score: 80.5 bits (197), Expect = 9.9e-16 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Carg26824 vs. TAIR10
Match: AT3G09950.1 (unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10 Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
BLAST of Carg26824 vs. TAIR10
Match: AT5G41761.1 (unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 3.1e-09 Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Carg26824 vs. TAIR10
Match: AT3G55570.1 (unknown protein) HSP 1 Score: 50.8 bits (120), Expect = 8.4e-07 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
BLAST of Carg26824 vs. TAIR10
Match: AT3G11405.1 (unknown protein) HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05 Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 0
BLAST of Carg26824 vs. TrEMBL
Match: tr|A0A0A0L4U1|A0A0A0L4U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36 Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of Carg26824 vs. TrEMBL
Match: tr|A0A1S3BM13|A0A1S3BM13_CUCME (uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36 Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg26824 vs. TrEMBL
Match: tr|A0A2C9UDL3|A0A2C9UDL3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G061400 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14 Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Carg26824 vs. TrEMBL
Match: tr|A0A2P2MI74|A0A2P2MI74_RHIMU (Uncharacterized protein MANES_15G061400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.3e-14 Identity = 50/101 (49.50%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of Carg26824 vs. TrEMBL
Match: tr|W9R1F4|W9R1F4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018236 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.3e-14 Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|