CmaCh16G002980 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G002980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAspartate--tRNA(Asp) ligase
LocationCma_Chr16 : 1396311 .. 1400242 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTATTTCTTTTCTCTTCAAGATTTCCAATATGCCTAAAAGGTCGATCTTTGAGATCGAATCTGGGTCTTGTTCTTCGGGGAAATCTTTCAGGTGGCATTGAAGGGATTCCTTCCCTAGTATCAAGTTTGGATCCTGCAGGTAGAGAGGAGTTTCTAAGTAGATGCTCTGCTGGACCTGGTGATCTAGTCTTGTTTGCCGTGGGCCATCAAGTATCGGTTAATAAAACTCTCGATAGGCTTAGACTATACGTAGCTAATGAGTTGGGCTTGGTCGACCATGTAAGTTTGTGCCTTCTATATTTTGATTAGTTTTATGCTAAATGTTACTTTCCATTCTCACTTATTTATCGTTTCTGTCCATTTAGTCTAGGCATTCAATTTTGTGGATGACTGATTTCCCAATGTTTGAATGGAACGATCTAGAGCAACGACTTGAGGTTCGACTCGTATACCTACAGTGTATCTTGTGTAGCCTCACATTTTTGCCCTAGTTCGACTCATATACCTACAATGCAATTTTCTCTTTGGCAGGCTTTGCACCACCCTTTTACAGCTCCAAACCCTGAAGACATCGATGATTTACCCTCGGCTCGTGCCTTAGCATATGATATGGTTTACAATGGAGTAGAGGTAGCTACTATTACCCAGATTTTTTTAACTAAAAAACATGAGTATTCAAGCTTCCACTGTAATGGAAACATAAAATGGCCAAAATAAAAATAAAAAAACAAAAGGAGTCTATCTCTACTACAGCTTACTCTCCTCTCGACATTAGTACACTCTTCTCGAGTCGTACACCAAAAAACGTGCTCTCTTCTCGAGTTAAAATTGTGTTCATTGCTTTTGTTGCTGTAGATTGGTGGAGGGAGTTTGAGAATTCACAAACGTGAAGTTCAAGAGAAGGTTCTGGAGATTGTGGGAATCTCTCATGAACAGGTAAAAGATAAAAGGGTTTCATGGTTCATTAATTTGGTTTGGTCCCATTAATTTATGAGGCCGAACTGATTGGTTTGGTTCAGCTGGTCCAGGGAAGATATTATCATCTCCTTCAATATTATTAGTTTTTCTTGTTCTTTTCTGGCTTGGCAGGCAGAAGCGAAGTTTGGTTATTTATTGGAGGCACTAGACATGGGTGCACCCCCTCGTGGTATTAACTTTAAGTCATCCTTATTGTTTAAATGCATTTCAATCATGCCAGTACTAATAATATATTGAAATTTTTAATATTGGGTTGCCTATTTTGATACTAAATCTGGTTCTTTATTTATTTTTATAAGTTCTTTTAGGGGAGACTTGGAAAACTTTCTTAGGTTTTTTTTATTTTTGCATCTGATCTGACTTATGAGAGAATAAGATGAGGAAAGAACTTTCTTTTCAAGTGATTATGGCGAGTTTCTACTTGGTGTTTATGTTAGATTTATAGATTATTTGTCCAATTACGAAGTAGTTTACAATATTTATTCAACCTCTAGGAGACTAGGATTGGAAAATCAGCCAGGCGTGGGCCTTTCAGTAGGGCTTGAAATGACCATAGATATCTTTGAAGACCCCATGTGGAAGATTTAATGATCTAAATTGTTTGTTTGTCGAAAATTAGTGTAACAATCCAAGTCCACTATTAGCAGATATTGTCCGCTTTAGCTTGTTATGCGTTTTCTATGGAGAGGGTCTAGCCCTACTTCGACTGGTGCCTCACACCGGCTAGTGACTGGCTCTGATACCATTTGTAATTGTTCAAGCCCACTGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTTCAAACCTTTATAAAGAATGTTTCGTTTCCTTCTCCAACCGATGTGAGATCTCTCACTTAGTGGGTTGTAAGCATAATACAAAGTGGGTCCTCAAATACTTGGTTACCAAAAGAAAGAACGAAACAGAAAAAAGAAGTGCAAAATGAACCGACTAAATAGATGAACGGTGTATTTTATTCGGGATGATAATTGGTGCTTTTATCTCTACTATGACTTCTATTTCATATACATGACTAGTGGTCCTCATAGCCATTAATAATGTCTATTTCTTTTGTTTTAACCCTTTTTCCCCTTGGTGCAGGGGGCATTGCTTATGGGTTGGACAGATTAGTCATGTTATAGGCAGAGGCAAATTCCATTAGGGATGCCATAGCTTTCCCAAAGACAACAACAGCACAATGTGCCCTCACAAAAGCTCCTTCAGAAATAGATCCCCAACAACTCAAGGATTTATCATATCAGAACCAATAAGTTTACATTCAGGTGCTCGTCCAGTTTGGTTCGGTTCAACTTTTAAATTCTATATTCACCTCGCTCACCCGTAATTTTTCGACTCAATGGCCTTGCATATTTTGAATCCGTGTTAGAATGTGATGAACAATGAACACAAAATTTTTATAAGTTAACAAAGTCCATCAAATCCCGTTAACAGGATCGGAGTTCTTTAGTTAACCTAATTTAGTGATGGGCGTTTTAGTTTGATGTCATATACAGTATAGGTATAGAGTGCTGTGTTTGGCTGTTCCTTAATGTCTTTTAATTTGGTTGGGCCGTTTTTGGTGCTTGTGATTTTGGTGCAGACAGGCGATTATCGGTTGTCAAGCAAAAGGTTGAAGCATGTGGATAAGAAGATGGGTGTGCAGATTGCTTGGATTCTCTTACCATAAAAAGGTAAACAATAAAGAGAAATATTGAGGAATTAATTGTCTTGTCAGGATTTTTTAAATTATTGATTAACTAATAAATTACTAACGATACTATGATTTTCATTGCATTTAATTCCTCTTAAATCACTCTTCTTTTGTTCATTAATCTTTAAATTAAATTTGTTAAATTTTCAGTGAATTATAAGGTTTATATATATATATATATATATATATATATATATATATATGTATGTATGTATTCTAAAGTAGGTTAAATTTAGAAAATAATTAGATTAAATTACAAGTTTAGTGGATAAATTTTAAATTTTGAAATTTTAGAGTCTAAACTTTTAATTTTATGTCTAATAAATTTTGAACAAATTTAAAAAATTTAAGAATTAATTGATCTATTTATATATGTTTAATAGAATTCTAAAATGTCAATTTTGTATCTTGATAGTTAAATTTTATAAAATTATAAAATTTAAAAATTAAATAGACAAAAACTCTCTTTAAAGATTAAATTATTAATTTAACAAAATAATTAAGTCCAAACATTAAGAAAATATATGGGTCTCGCGAGTCATTTGTAGGTTTGAATTTGATGTAATATTCTACATAAAAAATAATTGTAGGTTTATATTTTTTTTAATCCTTTATTTTTCTTTTTTCTAATTTTTTTTAACAAAATATTTTGAACCCGTAAAATATAAAAAGAAAAATAAAGGATTAAAAGCTATTGCTAAAATTATTAAAAAAAAAATACCAACAAAAAGAAACCAAAGCATTAAAAATAGTAGTAAATAATTTACAATTATTGTAATTCAAAAAAAGGAAAAAATAAAATATTTAAAACATTATTTATTTATTTATTGGAGTTGATCTGACAGCTTGAGCTGTGCAAAAATAGTGTCGTACAAAATAAATTAATTAATTCTGGACGTGTCGTTCTGATCCTTAACGCAATCAGCGGGAGGGGCACTCAGAAGAACAGAACTCGCGACTTCAGAAAACGACACAACACATCCACAGACGACATGTCGACCTGAGTTGGGTGTCAGAGATCAAATCCCTCAACCCCCCCCCACCCCCCACCTTGAAGTGGGTCCCTGATACGTTGGATACTGACATGTGTGGGCCCCTTCCATACGTGGCAATAGTGAAAACGACAACATTTCTTGGTCGGATATGACGTGGTCGTATGGCAGCGTACGTGCGGAAGTCTTTAGCTAATGGCTTTTCCAG

mRNA sequence

ATGGTACTATTTCTTTTCTCTTCAAGATTTCCAATATGCCTAAAAGGTCGATCTTTGAGATCGAATCTGGGTCTTGTTCTTCGGGGAAATCTTTCAGGTGGCATTGAAGGGATTCCTTCCCTAGTATCAAGTTTGGATCCTGCAGGTAGAGAGGAGTTTCTAAGTAGATGCTCTGCTGGACCTGGTGATCTAGTCTTGTTTGCCGTGGGCCATCAAGTATCGGTTAATAAAACTCTCGATAGGCTTAGACTATACGTAGCTAATGAGTTGGGCTTGGTCGACCATTCTAGGCATTCAATTTTGTGGATGACTGATTTCCCAATGTTTGAATGGAACGATCTAGAGCAACGACTTGAGGCTTTGCACCACCCTTTTACAGCTCCAAACCCTGAAGACATCGATGATTTACCCTCGGCTCGTGCCTTAGCATATGATATGGTTTACAATGGAGTAGAGATTGGTGGAGGGAGTTTGAGAATTCACAAACGTGAAGTTCAAGAGAAGGTTCTGGAGATTGTGGGAATCTCTCATGAACAGGCAGAAGCGAAGTTTGGTTATTTATTGGAGGCACTAGACATGGGTGCACCCCCTCGTGGGGGCATTGCTTATGGGTTGGACAGATTAGTCATGTTATAGGCAGAGGCAAATTCCATTAGGGATGCCATAGCTTTCCCAAAGACAACAACAGCACAATGTGCCCTCACAAAAGCTCCTTCAGAAATAGATCCCCAACAACTCAAGGATTTATCATATCAGAACCAATAAGTTTACATTCAGACAGGCGATTATCGGTTGTCAAGCAAAAGGTTGAAGCATGTGGATAAGAAGATGGGTGTGCAGATTGCTTGGATTCTCTTACCATAAAAAGCGGGAGGGGCACTCAGAAGAACAGAACTCGCGACTTCAGAAAACGACACAACACATCCACAGACGACATGTCGACCTGAGTTGGGTGTCAGAGATCAAATCCCTCAACCCCCCCCCACCCCCCACCTTGAAGTGGGTCCCTGATACGTTGGATACTGACATGTGTGGGCCCCTTCCATACGTGGCAATAGTGAAAACGACAACATTTCTTGGTCGGATATGACGTGGTCGTATGGCAGCGTACGTGCGGAAGTCTTTAGCTAATGGCTTTTCCAG

Coding sequence (CDS)

ATGGTACTATTTCTTTTCTCTTCAAGATTTCCAATATGCCTAAAAGGTCGATCTTTGAGATCGAATCTGGGTCTTGTTCTTCGGGGAAATCTTTCAGGTGGCATTGAAGGGATTCCTTCCCTAGTATCAAGTTTGGATCCTGCAGGTAGAGAGGAGTTTCTAAGTAGATGCTCTGCTGGACCTGGTGATCTAGTCTTGTTTGCCGTGGGCCATCAAGTATCGGTTAATAAAACTCTCGATAGGCTTAGACTATACGTAGCTAATGAGTTGGGCTTGGTCGACCATTCTAGGCATTCAATTTTGTGGATGACTGATTTCCCAATGTTTGAATGGAACGATCTAGAGCAACGACTTGAGGCTTTGCACCACCCTTTTACAGCTCCAAACCCTGAAGACATCGATGATTTACCCTCGGCTCGTGCCTTAGCATATGATATGGTTTACAATGGAGTAGAGATTGGTGGAGGGAGTTTGAGAATTCACAAACGTGAAGTTCAAGAGAAGGTTCTGGAGATTGTGGGAATCTCTCATGAACAGGCAGAAGCGAAGTTTGGTTATTTATTGGAGGCACTAGACATGGGTGCACCCCCTCGTGGGGGCATTGCTTATGGGTTGGACAGATTAGTCATGTTATAG

Protein sequence

MVLFLFSSRFPICLKGRSLRSNLGLVLRGNLSGGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGLVDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVEIGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML
Homology
[Close]
BLAST of CmaCh16G002980 vs. Swiss-Prot
Match: SYDM_ARATH (Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At4g33760 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 8.8e-81
Identity = 141/180 (78.33%), Postives = 163/180 (90.56%), Query Frame = 1 

Query: 32  SGGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELG 91
           +G IEGI +LVSSLD AG+  F+ +C A PGDL+LF VG   SVNKTLDRLRL+VA+++ 
Sbjct: 442 NGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLDRLRLFVAHDMD 501

Query: 92  LVDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGV 151
           L+DHS+HSILW+TDFPMFEWN+ EQRLEALHHPFTAP PED+DDLPSARALAYDMVYNGV
Sbjct: 502 LIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKPEDMDDLPSARALAYDMVYNGV 561

Query: 152 EIGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 211
           EIGGGSLRI+KR+VQEKVLEI+GIS E+AE+KFGYLLEALDMGAPP GGIAYGLDR+VM+
Sbjct: 562 EIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGAPPHGGIAYGLDRMVMM 621

[Close]
BLAST of CmaCh16G002980 vs. Swiss-Prot
Match: SYDND_TRIEI (Aspartate--tRNA(Asp/Asn) ligase OS=Trichodesmium erythraeum (strain IMS101) GN=aspS PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.9e-61
Identity = 109/179 (60.89%), Postives = 142/179 (79.33%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           G I+ I ++  +L    ++E L R +A PG L+LFA     +VNKTLDRLRL +  +LGL
Sbjct: 369 GKIDTIGAIKDNLTDEQKQELLKRTNAQPGHLLLFAADDANTVNKTLDRLRLVIGEQLGL 428

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +D  + S+LW+TDFPMFEWN+ EQRLEALHHPFTAP+P+DI+DL +ARA AYD+V+NG E
Sbjct: 429 IDQDKISLLWVTDFPMFEWNEDEQRLEALHHPFTAPHPDDINDLKTARAQAYDLVFNGYE 488

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           +GGGSLRI++R+VQEKV E +G+S ++A+ KFG+LLEA + G PP GGIAYGLDRLVML
Sbjct: 489 VGGGSLRIYQRDVQEKVFEAIGLSAQEADNKFGFLLEAFEYGTPPHGGIAYGLDRLVML 547

[Close]
BLAST of CmaCh16G002980 vs. Swiss-Prot
Match: SYDND_NOSS1 (Aspartate--tRNA(Asp/Asn) ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=aspS PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-58
Identity = 107/185 (57.84%), Postives = 139/185 (75.14%), Query Frame = 1 

Query: 27  LRGNLSGGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYV 86
           +R    G I+ I ++  +L    ++E L R  A PG L+LF  G  V+VNKTLDRLR  +
Sbjct: 363 IRVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAVTVNKTLDRLRQAI 422

Query: 87  ANELGLVDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDM 146
           A E GL+D  + ++LW+ DFPMFEWN  E+RLEALHHPFTAP+P+D+ DL +ARA AYD+
Sbjct: 423 AKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPDDLHDLKTARAQAYDL 482

Query: 147 VYNGVEIGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLD 206
           V+NG E+GGGS RI++REVQE+V E +G+S E+A+ KFG+LLEA + G PP GGIAYGLD
Sbjct: 483 VFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEAFEYGTPPHGGIAYGLD 542

Query: 207 RLVML 212
           RLVML
Sbjct: 543 RLVML 547

[Close]
BLAST of CmaCh16G002980 vs. Swiss-Prot
Match: SYDND_CYAP7 (Aspartate--tRNA(Asp/Asn) ligase OS=Cyanothece sp. (strain PCC 7424) GN=aspS PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-58
Identity = 103/177 (58.19%), Postives = 136/177 (76.84%), Query Frame = 1 

Query: 35  IEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGLVD 94
           ++ I ++  +L    ++E + +  A PG L+LF  G   +VNK+L RLRL V  +LGL+D
Sbjct: 371 LDTIAAIKDNLTDEQKQELIEKTGAKPGHLLLFGAGDTDTVNKSLARLRLVVGEKLGLID 430

Query: 95  HSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVEIG 154
             + ++LW+TDFPMFEWN  E+RLEALHHPFTAP PEDI+DLP ARALAYDM++NG+E+G
Sbjct: 431 EDKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKPEDINDLPHARALAYDMIFNGIELG 490

Query: 155 GGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           GGSLRI++R++QEKV   +G+S E+A  KFG+LLEA + G PP GGIAYGLDR VML
Sbjct: 491 GGSLRIYQRDIQEKVFSTIGLSMEEAYNKFGFLLEAFEYGTPPHGGIAYGLDRFVML 547

[Close]
BLAST of CmaCh16G002980 vs. Swiss-Prot
Match: SYDND_SYNE7 (Aspartate--tRNA(Asp/Asn) ligase OS=Synechococcus elongatus (strain PCC 7942) GN=aspS PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58
Identity = 106/185 (57.30%), Postives = 139/185 (75.14%), Query Frame = 1 

Query: 27  LRGNLSGGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYV 86
           +R   +G I+ I ++  +L    + E L R  A PG L+LF  G    VNK+LDR+R ++
Sbjct: 363 IRVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNKSLDRVRQFL 422

Query: 87  ANELGLVDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDM 146
             ELGL+D    ++LW+ DFPM EWN  E+R EALHHPFTAPNP+D++DL +ARA AYD+
Sbjct: 423 GKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNPQDLEDLTTARAQAYDI 482

Query: 147 VYNGVEIGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLD 206
           V NG+EIGGGSLRI++R++QE+V E +G+SHE+A+AKFG+LLEA D G PP GGIAYGLD
Sbjct: 483 VLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDFGTPPHGGIAYGLD 542

Query: 207 RLVML 212
           RLVML
Sbjct: 543 RLVML 547

[Close]
BLAST of CmaCh16G002980 vs. TrEMBL
Match: A0A0A0KT15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000540 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.5e-92
Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           GGIEGIP+LVS LDP  REEFL+RCSAGPGDL+LFAVGH+VSVNKTLDRLRLYVANELGL
Sbjct: 449 GGIEGIPALVSCLDPTDREEFLNRCSAGPGDLILFAVGHRVSVNKTLDRLRLYVANELGL 508

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           VDHSRHSILW+TDFPMFEWNDL+QRLEALHHPFTAPNPED+ DLPSARALAYDMVYNGVE
Sbjct: 509 VDHSRHSILWVTDFPMFEWNDLDQRLEALHHPFTAPNPEDVGDLPSARALAYDMVYNGVE 568

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRIHKREVQEKVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYGLDRLVML
Sbjct: 569 IGGGSLRIHKREVQEKVLEIVGISLEQAEAKFGYLLEALDMGAPPHGGIAYGLDRLVML 627

[Close]
BLAST of CmaCh16G002980 vs. TrEMBL
Match: A0A067KNA5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06970 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.4e-85
Identity = 154/179 (86.03%), Postives = 167/179 (93.30%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           G IEGIP+LVSSLDP+ +E+ L RCSAGPGDL+LFAVG   SVNKTLDRLR++VANE+ L
Sbjct: 443 GEIEGIPALVSSLDPSNKEQLLKRCSAGPGDLILFAVGQHASVNKTLDRLRVFVANEMDL 502

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +DHSRHSILW+TDFPMFEWND EQRLEALHHPFTAPNPED++DL SARALAYDMVYNGVE
Sbjct: 503 IDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVE 562

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRI+KREVQEKVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYGLDRLVML
Sbjct: 563 IGGGSLRIYKREVQEKVLEIVGISAEQAEAKFGYLLEALDMGAPPHGGIAYGLDRLVML 621

[Close]
BLAST of CmaCh16G002980 vs. TrEMBL
Match: M5VHJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024270mg PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.2e-84
Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           GG+EGIP+LVS++DP   E+FLSRCSA PGDL+LFAVGH  SVNKTLDRLR+Y+A+ELGL
Sbjct: 446 GGVEGIPALVSTMDPTNTEQFLSRCSARPGDLILFAVGHHSSVNKTLDRLRVYLAHELGL 505

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +D SRHSILW+TDFPMFEWND EQRLEALHHPFTAPNPEDI DL SARALAYDMVYNGVE
Sbjct: 506 IDDSRHSILWVTDFPMFEWNDSEQRLEALHHPFTAPNPEDIKDLSSARALAYDMVYNGVE 565

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRI+KREVQ+KVLEIVGIS E+AEAKFGYLLEALDMGAPP GGIAYGLDRL+ML
Sbjct: 566 IGGGSLRIYKREVQQKVLEIVGISPEEAEAKFGYLLEALDMGAPPHGGIAYGLDRLIML 624

[Close]
BLAST of CmaCh16G002980 vs. TrEMBL
Match: B9S7X4_RICCO (Aspartyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_1382380 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.2e-84
Identity = 151/179 (84.36%), Postives = 166/179 (92.74%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           G +EGI +LVSSLDP  +EE L RCSAGPGDL+LFAVGH  SVNKTLDRLR+++ANE+GL
Sbjct: 448 GEVEGIAALVSSLDPMKKEELLRRCSAGPGDLILFAVGHYASVNKTLDRLRMFIANEMGL 507

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +DHSRHSILW+TDFPMFEWND EQRLEALHHPFTAPNPED++DL SARALAYDMVYNGVE
Sbjct: 508 IDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVE 567

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRI+KRE+Q+KVLEIVGIS EQAE KFGYLLEALDMGAPP GGIAYGLDRLVML
Sbjct: 568 IGGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDMGAPPHGGIAYGLDRLVML 626

[Close]
BLAST of CmaCh16G002980 vs. TrEMBL
Match: B9HN33_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08760g PE=4 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 5.0e-83
Identity = 149/179 (83.24%), Postives = 166/179 (92.74%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           G +EGI +LVSSLD   +E+ LSRCSAGPGDL+LFAVGH  SV++TLDRLRL++AN+LGL
Sbjct: 440 GELEGISALVSSLDSTNKEQLLSRCSAGPGDLILFAVGHHPSVHRTLDRLRLFIANQLGL 499

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +DHSRHSILW+TDFPMFEWN+ EQRLEALHHPFTAPNPED++DL SARALAYDMVYNGVE
Sbjct: 500 IDHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVE 559

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRI+KREVQ+KVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYGLDRL ML
Sbjct: 560 IGGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEALDMGAPPHGGIAYGLDRLAML 618

[Close]
BLAST of CmaCh16G002980 vs. TAIR10
Match: AT4G33760.1 (AT4G33760.1 tRNA synthetase class II (D, K and N) family protein)

HSP 1 Score: 301.2 bits (770), Expect = 5.0e-82
Identity = 141/180 (78.33%), Postives = 163/180 (90.56%), Query Frame = 1 

Query: 32  SGGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELG 91
           +G IEGI +LVSSLD AG+  F+ +C A PGDL+LF VG   SVNKTLDRLRL+VA+++ 
Sbjct: 442 NGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLDRLRLFVAHDMD 501

Query: 92  LVDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGV 151
           L+DHS+HSILW+TDFPMFEWN+ EQRLEALHHPFTAP PED+DDLPSARALAYDMVYNGV
Sbjct: 502 LIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKPEDMDDLPSARALAYDMVYNGV 561

Query: 152 EIGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 211
           EIGGGSLRI+KR+VQEKVLEI+GIS E+AE+KFGYLLEALDMGAPP GGIAYGLDR+VM+
Sbjct: 562 EIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGAPPHGGIAYGLDRMVMM 621

[Close]
BLAST of CmaCh16G002980 vs. NCBI nr
Match: gi|778689110|ref|XP_004150278.2| (PREDICTED: aspartate--tRNA ligase, mitochondrial [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 6.5e-92
Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           GGIEGIP+LVS LDP  REEFL+RCSAGPGDL+LFAVGH+VSVNKTLDRLRLYVANELGL
Sbjct: 449 GGIEGIPALVSCLDPTDREEFLNRCSAGPGDLILFAVGHRVSVNKTLDRLRLYVANELGL 508

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           VDHSRHSILW+TDFPMFEWNDL+QRLEALHHPFTAPNPED+ DLPSARALAYDMVYNGVE
Sbjct: 509 VDHSRHSILWVTDFPMFEWNDLDQRLEALHHPFTAPNPEDVGDLPSARALAYDMVYNGVE 568

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRIHKREVQEKVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYGLDRLVML
Sbjct: 569 IGGGSLRIHKREVQEKVLEIVGISLEQAEAKFGYLLEALDMGAPPHGGIAYGLDRLVML 627

[Close]
BLAST of CmaCh16G002980 vs. NCBI nr
Match: gi|659108866|ref|XP_008454427.1| (PREDICTED: aspartate--tRNA ligase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 2.5e-91
Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           GGIEGIP+LVS LDP  RE+FL+RCSAGPGDLVLFAVGH+VSVNKTLDRLRLYVANELGL
Sbjct: 283 GGIEGIPALVSCLDPTVREKFLNRCSAGPGDLVLFAVGHRVSVNKTLDRLRLYVANELGL 342

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           VDHSRHSILW+TDFPMFEWNDLEQRLEALHHPFTAPNPED+ DLPSARALAYDMVYNGVE
Sbjct: 343 VDHSRHSILWVTDFPMFEWNDLEQRLEALHHPFTAPNPEDVGDLPSARALAYDMVYNGVE 402

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRIHKREVQEKVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYG+DRLVML
Sbjct: 403 IGGGSLRIHKREVQEKVLEIVGISLEQAEAKFGYLLEALDMGAPPHGGIAYGVDRLVML 461

[Close]
BLAST of CmaCh16G002980 vs. NCBI nr
Match: gi|659108863|ref|XP_008454426.1| (PREDICTED: aspartate--tRNA ligase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 2.5e-91
Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           GGIEGIP+LVS LDP  RE+FL+RCSAGPGDLVLFAVGH+VSVNKTLDRLRLYVANELGL
Sbjct: 449 GGIEGIPALVSCLDPTVREKFLNRCSAGPGDLVLFAVGHRVSVNKTLDRLRLYVANELGL 508

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           VDHSRHSILW+TDFPMFEWNDLEQRLEALHHPFTAPNPED+ DLPSARALAYDMVYNGVE
Sbjct: 509 VDHSRHSILWVTDFPMFEWNDLEQRLEALHHPFTAPNPEDVGDLPSARALAYDMVYNGVE 568

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRIHKREVQEKVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYG+DRLVML
Sbjct: 569 IGGGSLRIHKREVQEKVLEIVGISLEQAEAKFGYLLEALDMGAPPHGGIAYGVDRLVML 627

[Close]
BLAST of CmaCh16G002980 vs. NCBI nr
Match: gi|802600122|ref|XP_012072776.1| (PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas])

HSP 1 Score: 323.2 bits (827), Expect = 3.5e-85
Identity = 154/179 (86.03%), Postives = 167/179 (93.30%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           G IEGIP+LVSSLDP+ +E+ L RCSAGPGDL+LFAVG   SVNKTLDRLR++VANE+ L
Sbjct: 443 GEIEGIPALVSSLDPSNKEQLLKRCSAGPGDLILFAVGQHASVNKTLDRLRVFVANEMDL 502

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +DHSRHSILW+TDFPMFEWND EQRLEALHHPFTAPNPED++DL SARALAYDMVYNGVE
Sbjct: 503 IDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVE 562

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRI+KREVQEKVLEIVGIS EQAEAKFGYLLEALDMGAPP GGIAYGLDRLVML
Sbjct: 563 IGGGSLRIYKREVQEKVLEIVGISAEQAEAKFGYLLEALDMGAPPHGGIAYGLDRLVML 621

[Close]
BLAST of CmaCh16G002980 vs. NCBI nr
Match: gi|255562164|ref|XP_002522090.1| (PREDICTED: aspartate--tRNA ligase, chloroplastic/mitochondrial [Ricinus communis])

HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84
Identity = 151/179 (84.36%), Postives = 166/179 (92.74%), Query Frame = 1 

Query: 33  GGIEGIPSLVSSLDPAGREEFLSRCSAGPGDLVLFAVGHQVSVNKTLDRLRLYVANELGL 92
           G +EGI +LVSSLDP  +EE L RCSAGPGDL+LFAVGH  SVNKTLDRLR+++ANE+GL
Sbjct: 448 GEVEGIAALVSSLDPMKKEELLRRCSAGPGDLILFAVGHYASVNKTLDRLRMFIANEMGL 507

Query: 93  VDHSRHSILWMTDFPMFEWNDLEQRLEALHHPFTAPNPEDIDDLPSARALAYDMVYNGVE 152
           +DHSRHSILW+TDFPMFEWND EQRLEALHHPFTAPNPED++DL SARALAYDMVYNGVE
Sbjct: 508 IDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVE 567

Query: 153 IGGGSLRIHKREVQEKVLEIVGISHEQAEAKFGYLLEALDMGAPPRGGIAYGLDRLVML 212
           IGGGSLRI+KRE+Q+KVLEIVGIS EQAE KFGYLLEALDMGAPP GGIAYGLDRLVML
Sbjct: 568 IGGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDMGAPPHGGIAYGLDRLVML 626

The following BLAST results are available for this feature:
BLAST of CmaCh16G002980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYDM_ARATH8.8e-8178.33Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=A... [more]
SYDND_TRIEI5.9e-6160.89Aspartate--tRNA(Asp/Asn) ligase OS=Trichodesmium erythraeum (strain IMS101) GN=a... [more]
SYDND_NOSS11.2e-5857.84Aspartate--tRNA(Asp/Asn) ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=a... [more]
SYDND_CYAP71.6e-5858.19Aspartate--tRNA(Asp/Asn) ligase OS=Cyanothece sp. (strain PCC 7424) GN=aspS PE=3... [more]
SYDND_SYNE72.1e-5857.30Aspartate--tRNA(Asp/Asn) ligase OS=Synechococcus elongatus (strain PCC 7942) GN=... [more]
BLAST of CmaCh16G002980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT15_CUCSA4.5e-9292.74Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000540 PE=4 SV=1[more]
A0A067KNA5_JATCU2.4e-8586.03Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06970 PE=4 SV=1[more]
M5VHJ3_PRUPE1.2e-8484.92Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024270mg PE=4 SV=1[more]
B9S7X4_RICCO1.2e-8484.36Aspartyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_1382380 PE=4 SV=1[more]
B9HN33_POPTR5.0e-8383.24Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08760g PE=4 SV=2[more]
BLAST of CmaCh16G002980 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33760.15.0e-8278.33 tRNA synthetase class II (D, K and N) family protein[more]
BLAST of CmaCh16G002980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778689110|ref|XP_004150278.2|6.5e-9292.74PREDICTED: aspartate--tRNA ligase, mitochondrial [Cucumis sativus][more]
gi|659108866|ref|XP_008454427.1|2.5e-9192.74PREDICTED: aspartate--tRNA ligase, mitochondrial isoform X2 [Cucumis melo][more]
gi|659108863|ref|XP_008454426.1|2.5e-9192.74PREDICTED: aspartate--tRNA ligase, mitochondrial isoform X1 [Cucumis melo][more]
gi|802600122|ref|XP_012072776.1|3.5e-8586.03PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas][more]
gi|255562164|ref|XP_002522090.1|1.7e-8484.36PREDICTED: aspartate--tRNA ligase, chloroplastic/mitochondrial [Ricinus communis... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002312Asp/Asn-tRNA-synth_IIb
IPR004115GAD-like_sf
IPR004364aa-tRNA-synt_II
IPR004524Asp-tRNA-ligase_1
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
GO:0016874ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006422 aspartyl-tRNA aminoacylation
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0048481 plant ovule development
biological_process GO:0006364 rRNA processing
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0016874 ligase activity
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004815 aspartate-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G002980.1CmaCh16G002980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIbPRINTSPR01042TRNASYNTHASPcoord: 188..202
score: 1.8E-9coord: 144..160
score: 1.
IPR004115GAD-like domainGENE3DG3DSA:3.30.1360.30coord: 41..90
score: 1.
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)PFAMPF00152tRNA-synt_2coord: 92..211
score: 3.5
IPR004524Aspartate-tRNA ligase, bacterial/mitochondrial-typePANTHERPTHR22594:SF5ASPARTATE--TRNA LIGASE, MITOCHONDRIALcoord: 38..211
score: 4.3
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-likePANTHERPTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEcoord: 38..211
score: 4.3
NoneNo IPR availableGENE3DG3DSA:3.30.930.10coord: 91..211
score: 9.5
NoneNo IPR availableunknownSSF55681Class II aaRS and biotin synthetasescoord: 66..211
score: 3.18

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G002980Cucsa.298550Cucumber (Gy14) v1cgycmaB0824
CmaCh16G002980Cla006462Watermelon (97103) v1cmawmB293
CmaCh16G002980Csa4G000540Cucumber (Chinese Long) v2cmacuB333
CmaCh16G002980MELO3C018029Melon (DHL92) v3.5.1cmameB303
CmaCh16G002980ClCG10G009970Watermelon (Charleston Gray)cmawcgB280
CmaCh16G002980CSPI04G00050Wild cucumber (PI 183967)cmacpiB338
CmaCh16G002980CmoCh04G004580Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G002980CmoCh16G003190Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G002980Lsi03G010020Bottle gourd (USVL1VR-Ls)cmalsiB307
CmaCh16G002980Cp4.1LG14g04700Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G002980Cp4.1LG01g02740Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G002980MELO3C018029.2Melon (DHL92) v3.6.1cmamedB354
CmaCh16G002980CsaV3_4G000020Cucumber (Chinese Long) v3cmacucB0388
CmaCh16G002980Cla97C10G192990Watermelon (97103) v2cmawmbB332
CmaCh16G002980Bhi11G000908Wax gourdcmawgoB0410
CmaCh16G002980CsGy4G000050Cucumber (Gy14) v2cgybcmaB494
CmaCh16G002980Carg08100Silver-seed gourdcarcmaB0526
CmaCh16G002980Carg19705Silver-seed gourdcarcmaB0406
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G002980CmaCh04G004260Cucurbita maxima (Rimu)cmacmaB351
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G002980Cucurbita maxima (Rimu)cmacmaB135
CmaCh16G002980Cucumber (Gy14) v1cgycmaB0623
CmaCh16G002980Cucurbita moschata (Rifu)cmacmoB318
CmaCh16G002980Cucumber (Chinese Long) v2cmacuB348
CmaCh16G002980Melon (DHL92) v3.6.1cmamedB331
CmaCh16G002980Cucumber (Chinese Long) v3cmacucB0414