CmaCh16G002780 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGATGATAATTGTTATAATCCATGCCAATTGCCAGCCATTGAAGGGTCCCTCCCCTGTCTCTTCCCTTTTTATGCCATTTTATTTTCTCTGAAGTCGTGAATTGTTGTTGAAGAGGAATCGAGAGCACAGTGAAAGATCTGAAGCCATGAATGTCGATGAGGAAGTTGAGCGACTCAAGGAGGAAATTCAAAGGCTTGGTAAGGTCCAAGATGATGGTTCTTACAAGGTATCTACGATTTTTACATGTATAAACACGATTCCATTCTTCTCTCTTCTTTTTGGGGATCTTTTCCCGTTTTCCAGGTCAACTGTTCTTGTTCGATGTCGATCTTTCTCAGATGCTGAGATTTTTACCAGTTAGGCTTGGAAATAGGGCGGTTCTGAGTTGGATCTAGAATTTGAAATTGAGTTCTTCGATTATTTTTCTTGTAGTTTCAGGACGAGATCTGCCTGCCTATTACCTGTTTGATGTTTTGCCATTGTTGGTTCTGATTGGTTATGGCGAAAAATCTGAACTAAATTGAAATGATTGAATCGTGTTGTGTTACTAGATTCATTGAACCATTTGAAAGCCAGCTTGCCTTGCATTTGGATGTCTTTTAACTTGTGAATCTGCCTCTCTTCATTGGATAGAAAGTTTGAAACCCTAAATCTTATGATCCAGATAATGATTCAATCGTTTTTAGAACTGAAATGCAACTAGTTCTTTGTTCTGATCATTCATTACTGTCTTGTTCTAATCAAATATTTAGAACTGAAATGTAACTAGTTCTTGATTCTGATCATTCATTATTGTCTTGTTCTAATCAAATATTTAGAACTGAAATGCAACTAGTTCTTTGTTCTGATCATTCATTAATGTCTTGTTCTAATCAAATATTTAGAACTGAAATGCAACTAGTTCTTCGTTCTAATCATTCATTATTGTCTTGTTCTAATCACATATTTAGAACAGAAATGCAACTAGTTCTTGGTTCTGATCATTCATTATTATCTTGTTGTAATCACCTATTTAGAACTGGAATGCAACTAATTATTTGCTCTGATCATTCATTAGCTGAAACTAGTTCTTTGCATTCATTACTCTCTTCTTCTAATCAAATATTTAGTGCTGAAACTAGTTGTTTGCACAGCTGAAATGTCAGACATGGATACGAAACTCCTCATGAAACAAAATTTGCATATGCATATGCCATATCATTTCATCATATGAATTTTGGGTTTTCAATTTTGCAGGTAACATTTGGGGTGCTGTTCAATGATGACAGATGCGCTAACATATTCGAAGCGCTGGTCGGGACGCTACGAGCAGCAAAGAAGAGAAAAATAGTGACTTATGATGGTGAGCTGTTGCTGCAAGGAGTTCATGATAATGTTGAGATCGTCCTCAAAGCCACTCCAGCAGCAGAAGTTGCAACCACTGCAGCTGCGAAGGCTTGAGTAGTGATCCATATGCAGCATTTAAAACAGTGTATGCATCTTGAATTTCTATGTTCTATTATCACAATTTTCAATTTTAATAACATGTTTATCAAATTTGCACTAAAGTTGCCTCGCATTCTAGATCCAATACCGTCAAGAACAGCTTTTACTCTTTGATCAAGAACAGCTTTTACTCTTTGTTCCTTGATCGAAATTTCATCACATCGTGAATTTATGTTCCCTATATTTTACATATCCATATGAGTTCTTGAATTTTGAAGACAGTGCGTAAAAATAGATAGTTTGGATTATTACTATTTGACTCGGACTATAAATATAATTATTTT TGGGATGATAATTGTTATAATCCATGCCAATTGCCAGCCATTGAAGGGTCCCTCCCCTGTCTCTTCCCTTTTTATGCCATTTTATTTTCTCTGAAGTCGTGAATTGTTGTTGAAGAGGAATCGAGAGCACAGTGAAAGATCTGAAGCCATGAATGTCGATGAGGAAGTTGAGCGACTCAAGGAGGAAATTCAAAGGCTTGGTAAGGTCCAAGATGATGGTTCTTACAAGGTAACATTTGGGGTGCTGTTCAATGATGACAGATGCGCTAACATATTCGAAGCGCTGGTCGGGACGCTACGAGCAGCAAAGAAGAGAAAAATAGTGACTTATGATGGTGAGCTGTTGCTGCAAGGAGTTCATGATAATGTTGAGATCGTCCTCAAAGCCACTCCAGCAGCAGAAGTTGCAACCACTGCAGCTGCGAAGGCTTGAGTAGTGATCCATATGCAGCATTTAAAACAGTGTATGCATCTTGAATTTCTATGTTCTATTATCACAATTTTCAATTTTAATAACATGTTTATCAAATTTGCACTAAAGTTGCCTCGCATTCTAGATCCAATACCGTCAAGAACAGCTTTTACTCTTTGATCAAGAACAGCTTTTACTCTTTGTTCCTTGATCGAAATTTCATCACATCGTGAATTTATGTTCCCTATATTTTACATATCCATATGAGTTCTTGAATTTTGAAGACAGTGCGTAAAAATAGATAGTTTGGATTATTACTATTTGACTCGGACTATAAATATAATTATTTT ATGAATGTCGATGAGGAAGTTGAGCGACTCAAGGAGGAAATTCAAAGGCTTGGTAAGGTCCAAGATGATGGTTCTTACAAGGTAACATTTGGGGTGCTGTTCAATGATGACAGATGCGCTAACATATTCGAAGCGCTGGTCGGGACGCTACGAGCAGCAAAGAAGAGAAAAATAGTGACTTATGATGGTGAGCTGTTGCTGCAAGGAGTTCATGATAATGTTGAGATCGTCCTCAAAGCCACTCCAGCAGCAGAAGTTGCAACCACTGCAGCTGCGAAGGCTTGA MNVDEEVERLKEEIQRLGKVQDDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVTYDGELLLQGVHDNVEIVLKATPAAEVATTAAAKA
BLAST of CmaCh16G002780 vs. Swiss-Prot
Match: COSA_ORYSJ (Costars family protein OS=Oryza sativa subsp. japonica GN=Os03g0690000 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32 Identity = 71/87 (81.61%), Postives = 75/87 (86.21%), Query Frame = 1
BLAST of CmaCh16G002780 vs. Swiss-Prot
Match: COSA_ORYSI (Costars family protein OS=Oryza sativa subsp. indica GN=OsI_012692 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32 Identity = 71/87 (81.61%), Postives = 75/87 (86.21%), Query Frame = 1
BLAST of CmaCh16G002780 vs. Swiss-Prot
Match: COSA_ARATH (Costars family protein At4g33640 OS=Arabidopsis thaliana GN=At4g33640 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 5.7e-32 Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 1
BLAST of CmaCh16G002780 vs. Swiss-Prot
Match: COSA_PICSI (Costars family protein WS02710_H03 OS=Picea sitchensis PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.2e-31 Identity = 68/82 (82.93%), Postives = 74/82 (90.24%), Query Frame = 1
BLAST of CmaCh16G002780 vs. Swiss-Prot
Match: COSA_EUTHA (Costars family protein ST45-2 OS=Eutrema halophilum PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-30 Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of CmaCh16G002780 vs. TrEMBL
Match: A0A067KCM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18762 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 6.6e-35 Identity = 81/95 (85.26%), Postives = 85/95 (89.47%), Query Frame = 1
BLAST of CmaCh16G002780 vs. TrEMBL
Match: A0A068TM19_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014706001 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 8.6e-35 Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 1
BLAST of CmaCh16G002780 vs. TrEMBL
Match: B9S9L9_RICCO (Protein C6orf115, putative OS=Ricinus communis GN=RCOM_0886770 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-34 Identity = 78/94 (82.98%), Postives = 85/94 (90.43%), Query Frame = 1
BLAST of CmaCh16G002780 vs. TrEMBL
Match: B9HEA7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s03140g PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.9e-34 Identity = 80/95 (84.21%), Postives = 85/95 (89.47%), Query Frame = 1
BLAST of CmaCh16G002780 vs. TrEMBL
Match: M5VN64_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013924mg PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 4.3e-34 Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 1
BLAST of CmaCh16G002780 vs. TAIR10
Match: AT4G33640.1 (AT4G33640.1 unknown protein) HSP 1 Score: 137.9 bits (346), Expect = 3.2e-33 Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 1
BLAST of CmaCh16G002780 vs. NCBI nr
Match: gi|778692368|ref|XP_011653450.1| (PREDICTED: costars family protein [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 9.2e-38 Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 1
BLAST of CmaCh16G002780 vs. NCBI nr
Match: gi|659108934|ref|XP_008454461.1| (PREDICTED: costars family protein [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37 Identity = 83/93 (89.25%), Postives = 88/93 (94.62%), Query Frame = 1
BLAST of CmaCh16G002780 vs. NCBI nr
Match: gi|645263466|ref|XP_008237249.1| (PREDICTED: costars family protein [Prunus mume]) HSP 1 Score: 157.9 bits (398), Expect = 8.6e-36 Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 1
BLAST of CmaCh16G002780 vs. NCBI nr
Match: gi|1009151438|ref|XP_015893552.1| (PREDICTED: costars family protein-like [Ziziphus jujuba]) HSP 1 Score: 156.8 bits (395), Expect = 1.9e-35 Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 1
BLAST of CmaCh16G002780 vs. NCBI nr
Match: gi|694432989|ref|XP_009343817.1| (PREDICTED: costars family protein-like [Pyrus x bretschneideri]) HSP 1 Score: 156.4 bits (394), Expect = 2.5e-35 Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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