CmaCh16G002750 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTTGGTGTTCTAAAGAGGGAAGAACCGAAGCACAATCTGAAGCTTCCATTATTACCGGTGATAAAATCAAGCGGCTTTGATTATTATCATCGTTAGTCAACAGATGAGCTGAATTTTTTTCCCCAATCTTTTTCGATTTTGTCTCTGTTTTTAATATTTGTTGGAGCTTCGAGTTCTCCGTCTTTCTTGGAGAACAACAAATGGCCATTGTTTTGCCAACCAACTCACCCACTTCTTTAAAGGGAAATTCCCCCTTTGTGCGAATGTTCCAGATCCCATCTTCTTCTTTCATTGGTTTTTCACTCTTTTGAGCTAACTGGTAGATCTCTGCCATGGAAAGTGCTCTCTCTGGTTCTTCTTCAGTTTCTTACTCCCTTTTTTCCTCTTCTTCTCAGCAGCCTCACAGGAGCTTCTTCAAGACCTCACATGTACTTTCTTTTTGGTTGTTTTTGTTCTGTGTTCTTCCTTTTCTGTGATGATTGTTCTTCATTTCTTGGCTCTTTTGTTGTTGCAGATCTTTGAGTTTAAGCTGAGAACGAGGAAAATGGAGCATACCCATTTGAAATTGGCTACCCCTGTCAAGTAAGTTCCCCTGTTTGTTGGAACTGGTCCTTTAATTTGCTTGTTTTCTTGAATGCTTTAGCTGTTTGTACCTCCTTGTGTTGTTTTCCTTGTAATTCTAGGTGAAATTGACATAAGGAAGAATGTTAATAAGCTTATGAAATCTGTGCACTTACATTCCAAACATATGGGATTGTTCTAATCATGTTTTGTGTTAGAACGACAGTGTTGTATCCATTGTGATGTATATTAGTGATGTTCGTTGAGTGATAATGGAATGGAAAGTTCACATGAATGCTCAATTGCTCATGATTTTGAGTGCACTACAAGTTTAAGAACGACATCATTTATCATAGTTTCAATCCAGTTTCAACCCCTACTTATTCTTTAGCTGCTTCTATTGTGTTCATTCATCCTTTTATCTGTTGTGTAATAAATACAAAGGATGTCTGAAAATTTGTTGTGAGATCTCGGTTGGATAGGGGATCGAAACATTTTTTGTAAGGGTGTGGAAACCGCTCTCTAGCAGACGTGTTTGAAAACCTTGAGGGGAAGCCCAGAAGGGAAAGTCCAAAGAGGAAGCTAGCGGTGGGCTTGGGCTGTTACAAATAGTATTAGAGCTAGACTCGGGGCAGTGTGGTAGCGAGGACGCTGGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAAAGGAGAATGAAACGTTTCTTATAAGGGTGTGGAAACCTCTCCCTCGTAGATGTGTTTCTTGAGGGGAAGCTCAAAAGGGAAAACCCGAAGAGAATAATATCTGCCAGTGGTGGGCTTAAGTTGTTACAAATGGTATCAGAGCCAGACGATTGTAAGATCTCACATCGGTTGGAGGGAAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCACTAGCAGATGCGTTTTAAAACCTTGAGGGGAAGTCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGTTAGCGATGAGCTTAGGTTGTTACATCTGTTGACTGTCAGTTTAAAGTTTCAAATTTACGCTATTTAGCGATTTTCACCCTTGTGGATAAAAGGGGCTAAGCTTTCGTTAAGAAAAACGACAGAAGTATTTTTGGTGGTTCGAGTAAAGAACTTCGACTGTTTCATGCTTTCAACTTTTTTCTTTCCACATGCAGCTGCAGCCACCCTGGACTGACTCAAGAAGTTGAAAAGAACAAGATGAACGTTGTGATAGAAACCGAAATGCGGCAAGACTTATTCGAGGAAATCAAACATCGATTTCTAAGCTTTAAAAGGAATACATATATGTAAGCAACGAGCTACTCTTCTTTTGGCGTTACAAAACTTCGAAAGAAAATAACTTTCTTCCACTTGTCAGGAAAAATTTCGAACATTTTCAACGTCTTTCCGATGCTCAATCTCCCAAAGTGAGTATTCATCTTCCAATATCAATGGCTTCTAGACAACTTTTGAAATGGATTGCTCTTAGCTTAAGAGACGATCGCGTCAACTGACATTTTGAAGACAGTTTTTGGTGATTTCTTGTGCAGATTCTAGAGTTTGTCCCTCGAACGTTTTAGGTTTCCAACCCGGAGAAGCCTTTCTTGTTCGCAATATCGCGAATTTGGTTGTACCCTTCGAGGCACGTAGTCTATGACTTTGAATTGCATCAGTTCATATCGTTGTGGCTGTTTTTTTCGTAACTCTGTTGGAACGAAACAAAGAAACTTTTCATGAACGAACGGAACAAGTAGATTCGTCGAAGTTTTGAAATAAATTACTGTCGAACAAATTTCGTATCTTGTTTATTTGCTAAACTTTTCAGTCTTGTTATTATCACAGAAAGGACCATCAGAAACACAAGCTGCTTTGCAATTCTCTGTTAACACGCTCGAAGTAAGTTATCTTTTAAACGATATTGATATCAATGTTCGTTGATTAAACTGTGTAATGCGTTGAACATGCGATTTTGTTCGATTGTAGGTTGAAAACATTTTCATCATTGGTCATAGCTGTTGTGGGGGAATTCGCGCACTTATGAGTATGCAAGACGAAAAACCGAGGTTCGATTGAGCTGAATTCAATACTTTTGTTTGAAAACGCTATATATGATTCTTGAAAAGTGTACTCTTTGGAACTGAATGCAGCTGTTTTATCACAAATTGGGTTATTAATGGAAAGACTGCAAAAATAAGAACAAAAGCTGCTGCTTCCAACCTCAACTTCGACCAGCAATGCCGACACTGTGAAAAGGTTGTCTCTCTATTTACAAAATCCTTAAAAACTGTTCGAACTATCACCATGTTCTTGGTCGTGTTCTTGACATAAGTGGTCGAAACTTGAAAGTACAATCCTTAAAAGCTCGTTCTTGTTGTTCATCATTGGCAGGAATCGCTCGACAATTCGCTGCTGAACTTGCTGACATACCCTTGGATTGAAGAAAAGGTGAAGAAAGGGAGCCTCGCCATTCATGGTGGCTACTACGACTTTGTCGACGGTACGTTCGAGAAATGGACTCTCGATTACGAAGCGAGCTGCGTTAAAGAGGATACTCGTCGACTGGCTGTAAAAAACCGAGAATTTTGGTCGTAGCTTTTAAAGTATGCTTTTCTACCTTTATAGTGATTCTGTTTTCACGTATGCCTTTGAAGCCTTGTGATGAAAAGACATGGAAGAATAATTTGCTGATAGCAAGATTGAGTTTGAGAATATATTGACTGCTGCTTTTGTGCTTGTTTA GATTTGGTGTTCTAAAGAGGGAAGAACCGAAGCACAATCTGAAGCTTCCATTATTACCGGTGATAAAATCAAGCGGCTTTGATTATTATCATCGTTAGTCAACAGATGAGCTGAATTTTTTTCCCCAATCTTTTTCGATTTTGTCTCTGTTTTTAATATTTGTTGGAGCTTCGAGTTCTCCGTCTTTCTTGGAGAACAACAAATGGCCATTGTTTTGCCAACCAACTCACCCACTTCTTTAAAGGGAAATTCCCCCTTTGTGCGAATGTTCCAGATCCCATCTTCTTCTTTCATTGGTTTTTCACTCTTTTGAGCTAACTGGTAGATCTCTGCCATGGAAAGTGCTCTCTCTGGTTCTTCTTCAGTTTCTTACTCCCTTTTTTCCTCTTCTTCTCAGCAGCCTCACAGGAGCTTCTTCAAGACCTCACATATCTTTGAGTTTAAGCTGAGAACGAGGAAAATGGAGCATACCCATTTGAAATTGGCTACCCCTGTCAACTGCAGCCACCCTGGACTGACTCAAGAAGTTGAAAAGAACAAGATGAACGTTGTGATAGAAACCGAAATGCGGCAAGACTTATTCGAGGAAATCAAACATCGATTTCTAAGCTTTAAAAGGAATACATATATGAAAAATTTCGAACATTTTCAACGTCTTTCCGATGCTCAATCTCCCAAATTTTTGGTGATTTCTTGTGCAGATTCTAGAGTTTGTCCCTCGAACGTTTTAGGTTTCCAACCCGGAGAAGCCTTTCTTGTTCGCAATATCGCGAATTTGGTTGTACCCTTCGAGAAAGGACCATCAGAAACACAAGCTGCTTTGCAATTCTCTGTTAACACGCTCGAAGTTGAAAACATTTTCATCATTGGTCATAGCTGTTGTGGGGGAATTCGCGCACTTATGAGTATGCAAGACGAAAAACCGAGCTGTTTTATCACAAATTGGGTTATTAATGGAAAGACTGCAAAAATAAGAACAAAAGCTGCTGCTTCCAACCTCAACTTCGACCAGCAATGCCGACACTGTGAAAAGGAATCGCTCGACAATTCGCTGCTGAACTTGCTGACATACCCTTGGATTGAAGAAAAGGTGAAGAAAGGGAGCCTCGCCATTCATGGTGGCTACTACGACTTTGTCGACGGTACGTTCGAGAAATGGACTCTCGATTACGAAGCGAGCTGCGTTAAAGAGGATACTCGTCGACTGGCTGTAAAAAACCGAGAATTTTGGTCGTAGCTTTTAAAGTATGCTTTTCTACCTTTATAGTGATTCTGTTTTCACGTATGCCTTTGAAGCCTTGTGATGAAAAGACATGGAAGAATAATTTGCTGATAGCAAGATTGAGTTTGAGAATATATTGACTGCTGCTTTTGTGCTTGTTTA ATGGAAAGTGCTCTCTCTGGTTCTTCTTCAGTTTCTTACTCCCTTTTTTCCTCTTCTTCTCAGCAGCCTCACAGGAGCTTCTTCAAGACCTCACATATCTTTGAGTTTAAGCTGAGAACGAGGAAAATGGAGCATACCCATTTGAAATTGGCTACCCCTGTCAACTGCAGCCACCCTGGACTGACTCAAGAAGTTGAAAAGAACAAGATGAACGTTGTGATAGAAACCGAAATGCGGCAAGACTTATTCGAGGAAATCAAACATCGATTTCTAAGCTTTAAAAGGAATACATATATGAAAAATTTCGAACATTTTCAACGTCTTTCCGATGCTCAATCTCCCAAATTTTTGGTGATTTCTTGTGCAGATTCTAGAGTTTGTCCCTCGAACGTTTTAGGTTTCCAACCCGGAGAAGCCTTTCTTGTTCGCAATATCGCGAATTTGGTTGTACCCTTCGAGAAAGGACCATCAGAAACACAAGCTGCTTTGCAATTCTCTGTTAACACGCTCGAAGTTGAAAACATTTTCATCATTGGTCATAGCTGTTGTGGGGGAATTCGCGCACTTATGAGTATGCAAGACGAAAAACCGAGCTGTTTTATCACAAATTGGGTTATTAATGGAAAGACTGCAAAAATAAGAACAAAAGCTGCTGCTTCCAACCTCAACTTCGACCAGCAATGCCGACACTGTGAAAAGGAATCGCTCGACAATTCGCTGCTGAACTTGCTGACATACCCTTGGATTGAAGAAAAGGTGAAGAAAGGGAGCCTCGCCATTCATGGTGGCTACTACGACTTTGTCGACGGTACGTTCGAGAAATGGACTCTCGATTACGAAGCGAGCTGCGTTAAAGAGGATACTCGTCGACTGGCTGTAAAAAACCGAGAATTTTGGTCGTAG MESALSGSSSVSYSLFSSSSQQPHRSFFKTSHIFEFKLRTRKMEHTHLKLATPVNCSHPGLTQEVEKNKMNVVIETEMRQDLFEEIKHRFLSFKRNTYMKNFEHFQRLSDAQSPKFLVISCADSRVCPSNVLGFQPGEAFLVRNIANLVVPFEKGPSETQAALQFSVNTLEVENIFIIGHSCCGGIRALMSMQDEKPSCFITNWVINGKTAKIRTKAAASNLNFDQQCRHCEKESLDNSLLNLLTYPWIEEKVKKGSLAIHGGYYDFVDGTFEKWTLDYEASCVKEDTRRLAVKNREFWS
BLAST of CmaCh16G002750 vs. Swiss-Prot
Match: BCA5_ARATH (Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana GN=BCA5 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.4e-85 Identity = 164/295 (55.59%), Postives = 214/295 (72.54%), Query Frame = 1
BLAST of CmaCh16G002750 vs. Swiss-Prot
Match: BCA6_ARATH (Beta carbonic anhydrase 6, mitochondrial OS=Arabidopsis thaliana GN=BCA6 PE=2 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-68 Identity = 123/238 (51.68%), Postives = 170/238 (71.43%), Query Frame = 1
BLAST of CmaCh16G002750 vs. Swiss-Prot
Match: BCA4_ARATH (Beta carbonic anhydrase 4 OS=Arabidopsis thaliana GN=BCA4 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55 Identity = 106/206 (51.46%), Postives = 146/206 (70.87%), Query Frame = 1
BLAST of CmaCh16G002750 vs. Swiss-Prot
Match: BCA3_ARATH (Beta carbonic anhydrase 3 OS=Arabidopsis thaliana GN=BCA3 PE=2 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.0e-53 Identity = 109/226 (48.23%), Postives = 148/226 (65.49%), Query Frame = 1
BLAST of CmaCh16G002750 vs. Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 205.3 bits (521), Expect = 9.4e-52 Identity = 103/202 (50.99%), Postives = 139/202 (68.81%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TrEMBL
Match: A0A0A0L180_CUCSA (Carbonic anhydrase OS=Cucumis sativus GN=Csa_4G182270 PE=3 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 3.6e-143 Identity = 261/302 (86.42%), Postives = 275/302 (91.06%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TrEMBL
Match: M5VXG5_PRUPE (Carbonic anhydrase OS=Prunus persica GN=PRUPE_ppa008903mg PE=3 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.1e-96 Identity = 180/295 (61.02%), Postives = 223/295 (75.59%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TrEMBL
Match: I3SGF2_LOTJA (Carbonic anhydrase OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 6.9e-94 Identity = 168/280 (60.00%), Postives = 215/280 (76.79%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TrEMBL
Match: I3T0V3_LOTJA (Carbonic anhydrase OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.2e-93 Identity = 177/306 (57.84%), Postives = 226/306 (73.86%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TrEMBL
Match: A0A061E269_THECC (Carbonic anhydrase OS=Theobroma cacao GN=TCM_007383 PE=3 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 2.0e-93 Identity = 173/280 (61.79%), Postives = 215/280 (76.79%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TAIR10
Match: AT4G33580.2 (AT4G33580.2 beta carbonic anhydrase 5) HSP 1 Score: 310.1 bits (793), Expect = 1.5e-84 Identity = 163/296 (55.07%), Postives = 215/296 (72.64%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TAIR10
Match: AT1G58180.2 (AT1G58180.2 beta carbonic anhydrase 6) HSP 1 Score: 261.5 bits (667), Expect = 6.2e-70 Identity = 123/238 (51.68%), Postives = 170/238 (71.43%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TAIR10
Match: AT1G70410.2 (AT1G70410.2 beta carbonic anhydrase 4) HSP 1 Score: 218.0 bits (554), Expect = 7.9e-57 Identity = 106/206 (51.46%), Postives = 146/206 (70.87%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TAIR10
Match: AT1G23730.1 (AT1G23730.1 beta carbonic anhydrase 3) HSP 1 Score: 211.8 bits (538), Expect = 5.6e-55 Identity = 109/226 (48.23%), Postives = 148/226 (65.49%), Query Frame = 1
BLAST of CmaCh16G002750 vs. TAIR10
Match: AT5G14740.1 (AT5G14740.1 carbonic anhydrase 2) HSP 1 Score: 198.4 bits (503), Expect = 6.4e-51 Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 1
BLAST of CmaCh16G002750 vs. NCBI nr
Match: gi|659108942|ref|XP_008454465.1| (PREDICTED: carbonic anhydrase 2 isoform X1 [Cucumis melo]) HSP 1 Score: 520.8 bits (1340), Expect = 1.6e-144 Identity = 263/302 (87.09%), Postives = 277/302 (91.72%), Query Frame = 1
BLAST of CmaCh16G002750 vs. NCBI nr
Match: gi|449459542|ref|XP_004147505.1| (PREDICTED: beta carbonic anhydrase 5, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 515.8 bits (1327), Expect = 5.2e-143 Identity = 261/302 (86.42%), Postives = 275/302 (91.06%), Query Frame = 1
BLAST of CmaCh16G002750 vs. NCBI nr
Match: gi|778692378|ref|XP_011653453.1| (PREDICTED: beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 491.5 bits (1264), Expect = 1.0e-135 Identity = 238/268 (88.81%), Postives = 250/268 (93.28%), Query Frame = 1
BLAST of CmaCh16G002750 vs. NCBI nr
Match: gi|659108946|ref|XP_008454467.1| (PREDICTED: carbonic anhydrase 2 isoform X2 [Cucumis melo]) HSP 1 Score: 478.8 bits (1231), Expect = 7.0e-132 Identity = 231/258 (89.53%), Postives = 242/258 (93.80%), Query Frame = 1
BLAST of CmaCh16G002750 vs. NCBI nr
Match: gi|645263412|ref|XP_008237225.1| (PREDICTED: carbonic anhydrase 2, partial [Prunus mume]) HSP 1 Score: 366.3 bits (939), Expect = 5.1e-98 Identity = 183/295 (62.03%), Postives = 224/295 (75.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|