Carg19729 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATTACCGGTGATAAAATCAAGCGGCTTTGATTATTATCATCGTTAGTCAACAGATGAGCTGAATTTTTTTAACAATCTTTTTCGATTTTGTCTCTGTTTTTAATATTTGTTGGAGCTTCGAGTTCTCCGTCTTTCTTGGAGAACAACAAATGGCCATTGTTTTGCCAACCAACTCACCCACTTCTTTAAAGGGAAATTCCCTCTTTGTGCGAATGTTCCAGATCCCATCTTCTTCTTTCATTGGTTTTTCACTCTTTTGAGCTAACTGGTAGATCTCTGCCATGGAAACTGCTCTCTCTGCTTCTTCTTCAGTTTCTTACTCCCTTTTTTCCTCTTCTTCTCAGCAGCCTCACAGGAGCTTCTTCAAGACCTCACATGTACTTTCTTTTTGGTTCTTCTTCTTGTTCTGTGTTCTTCCTTTTCTGTGATGATCGTTCTTCATTTCTTGGCTCTTTTTTTGTTGCAGATCTTTGAGTTTAAGCTGAGAACGAGGAAAATGGAGCACACCCATTTGAAATTGGCTACCTCTGTCAAGTAAGTTCCCCTGTTTGTTGGAACTGGTCCTTTAATTTGCTTGTTTTCTTGAATGCTTTAGCTGTTTGTACCTCCTTGTGTTGTTTTCCTTGTAATTCTAGGTGAAATTGACTTAAGGAAGAATGTTAATAAGCTTATGAAATCTGTGCACTTACATTCCAAACATATGGGATTGTTCTAATCATGTTTTGTGTTAGAACGACAGTGTTGTATCCATTGTGATGTATATTAGTGATGTTCGTTGAGTGATAATGGAATGGAAAGTTCACATGAATGCTCAATTGCTCATGATTTTGAGTGCACTACAAGTTTAAGAACGACATCATTTATCATAGTTTAAAACTTGTTTCAACGCCTACTTATTCTTTAGCTGCTTCTCTTGTGTTCATTTATCCTTTATCTGTTGTGTAATAAATACAAAGGATGTCTGAAAATTTGCTGTGAGATCTCGGTTGGAGAGGAGATCGAAACATTTCTTGTTAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTGAGGGGAAGCCTAGAAGGAAAAGTCCAAAGAGGAAGCTAGCGGTGGGCTTGGGTTGTTACAAATGGTATTAGAGCTAGACACGGGGGGGTGTGGTAGCGAGGACGCTGGGCCCCCAAGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGGAGAACGAAACGTTTCTTATAAGGGTGTGGAAACCTCTCCCTCTTAGATGTGTTTCTTGTGGGGAAGCTCAAAAGGGAAAACCCGAAGAGAACAATATCTGCTAGTGGTGGGCTTGAGTTGTTACAAATGGTATCAGAGCCAGACGATTGTGAGATCCCACATCGGTTGGAGGGGAGAACGAAACATTCCTTATAAGGGTATAGAAACCTCTCCTTAGTAGACATATTTTAAAACCTTGAAGGCAGTCCAGAAGTGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTAGGTTGTTACATCCGTTGACTGTCAGTTTAAAGTTTCAAATTTACGTTATTTAGCGATGTTCACCGTTGTGGATAAAAGGGTCGAAGCTTTTCGTTAAGAAAAACGAAAGAAGTATTTTTGGTGGTTCGAGTAAAGAACTTCGACTGTTTCATGCAGCTGCAGCCACCCTGGACTGACTCAAGAAGTTGAAAGTAACAAGATGAACGTTGTGATAGAAACCGAAACGCGGCAAGACTTATTCGAGGAAATCAAACATCGATTTCTAAGCTTTAAAAGGAATACATATATGTAAGCAACGAGCTACTCTTCTTTTGGCGTTACAAAACTTCGAAAGCAAATAACTTTCTTCCATTTGTCAGGAAAAATTTCGAACATTTTCAACGTCTTTCCGATGCTCAATCACCCAAAGTGAGTATTCATCTTCCAATATCAATGGCTTCTAGACAACTTTTAAAATGGATTGCTCTTAGCTTAACAGACAGATCGTGTCAACTGACATTTTGAAGACAGTTTTTGGTGATTTCTTGTGCAGATTCTAGAGTTTGTCCCTCGAACGTTTTAGGTTTCCAACCCGGAGAAGCCTTTCTTGTTCGCAATATCGCGAATTTGGTTGTACCCTTCGAGGCACGTAGTCTATGACTTTGAATTGCATCAGTTCATATCGTTGTGGCTGTTTTTTCGTAACTCTGTTGGAACGAAACAAAGAAACTTTTCATGAACGAACGGAACAAGTAGATTCGTCGAAGTTTTAAAATAAATTACTGTCGAACAAATTTCGTATCTTGTTTATTTGCTAAACTTTTCAGTCTTGTTATTATCACAGAAAGGACCATCAGAAACACAAGCTGCATTGCAGTTCTCTGTTAACACGCTCGAAGTAAGTTATCTTTTAAACGATATCGATATCAATGTTCGTTGATTAAACTGTGTAATGCGTTGAACATGCGATTTTGTTCGATTGTAGGTTGAAAACATTTTCGTCATTGGTCATAGCTGTTGTGGGGGAATTCGCGCACTTATGAGTATGCAAGACGAAAAACCGAGGTTCGATCGAGCTGAATTCGATTCTTTTTGTTTGAAAACGCTATGTACGATTCTTGAAAAGTATACTTTTCCGAACTGAATGCAGCTGTTTTATCACAAATTGGGTTATTAATGGAAAGACTGCAAAAATAAGAACAAAAGCTGCTGCTTCCAACCTCAACTTCGACCAGCAATGCCGACACTGTGAAAAGGTTGTCTCTCTATTTACAAAATCCTTAAAAACTGTTCAAACTAACACTGTGTTCTTGGTCGTGTTCTTGTCATAAGTGGTCGAAACTTGAAAGTACAATCCTTAAAAGCTCGTTCTTGTTGTTCATCGTCGGCAGGAATCGCTCGACAATTCGCTGCTGAACTTGCTGACATACCCTTGGATTGAAGAAAAGGTGAAGAAAGGAAGCCTTGCCATTCATGGTGGCTACTACGACTTTGTCGACGGTACGTTCGAGAAATGGACTCTTGATTACGAAGCGAGCTGCGTTAAAGAGGATACTCGTCGACTGGCTGTAAAAAACCGAGAATTTTGGTCGTAGCTTTTAAAGTATGCTTTTCTATCCCTTTATAGTGTTCCTTATGATTCTGTTTTCACGTATGCCTTTGAAAGCCTTGTGATGAAAAGACATGGAAGAATAATTTGCTTATAGCAAGATTGAGTTTGAGAATATATTGACTGCTGCTTTTGTGCTTGTTTACAACTTCTGCTTTATACTTCACTTTTTTACCTTGCATTTCTAATAGTTCAAGTCCATCGCTAGCAGATATTGTCCGTTTTAGCCTGTTATGTATCGTCGTTAGCCTCACGGTTTTATAGTGCGTCTACT ATTATTACCGGTGATAAAATCAAGCGGCTTTGATTATTATCATCGTTAGTCAACAGATGAGCTGAATTTTTTTAACAATCTTTTTCGATTTTGTCTCTGTTTTTAATATTTGTTGGAGCTTCGAGTTCTCCGTCTTTCTTGGAGAACAACAAATGGCCATTGTTTTGCCAACCAACTCACCCACTTCTTTAAAGGGAAATTCCCTCTTTGTGCGAATGTTCCAGATCCCATCTTCTTCTTTCATTGGTTTTTCACTCTTTTGAGCTAACTGGTAGATCTCTGCCATGGAAACTGCTCTCTCTGCTTCTTCTTCAGTTTCTTACTCCCTTTTTTCCTCTTCTTCTCAGCAGCCTCACAGGAGCTTCTTCAAGACCTCACATATCTTTGAGTTTAAGCTGAGAACGAGGAAAATGGAGCACACCCATTTGAAATTGGCTACCTCTGTCAACTGCAGCCACCCTGGACTGACTCAAGAAGTTGAAAGTAACAAGATGAACGTTGTGATAGAAACCGAAACGCGGCAAGACTTATTCGAGGAAATCAAACATCGATTTCTAAGCTTTAAAAGGAATACATATATGAAAAATTTCGAACATTTTCAACGTCTTTCCGATGCTCAATCACCCAAATTTTTGGTGATTTCTTGTGCAGATTCTAGAGTTTGTCCCTCGAACGTTTTAGGTTTCCAACCCGGAGAAGCCTTTCTTGTTCGCAATATCGCGAATTTGGTTGTACCCTTCGAGGCACGTATCTTGTTATTATCACAGAAAGGACCATCAGAAACACAAGCTGCATTGCAGTTCTCTGTTAACACGCTCGAAGTTGAAAACATTTTCGTCATTGGTCATAGCTGTTGTGGGGGAATTCGCGCACTTATGAGTATGCAAGACGAAAAACCGAGCTGTTTTATCACAAATTGGGTTATTAATGGAAAGACTGCAAAAATAAGAACAAAAGCTGCTGCTTCCAACCTCAACTTCGACCAGCAATGCCGACACTGTGAAAAGGAATCGCTCGACAATTCGCTGCTGAACTTGCTGACATACCCTTGGATTGAAGAAAAGGTGAAGAAAGGAAGCCTTGCCATTCATGGTGGCTACTACGACTTTGTCGACGGTACGTTCGAGAAATGGACTCTTGATTACGAAGCGAGCTGCGTTAAAGAGGATACTCGTCGACTGGCTGTAAAAAACCGAGAATTTTGGTCGTAGCTTTTAAAGTATGCTTTTCTATCCCTTTATAGTGTTCCTTATGATTCTGTTTTCACGTATGCCTTTGAAAGCCTTGTGATGAAAAGACATGGAAGAATAATTTGCTTATAGCAAGATTGAGTTTGAGAATATATTGACTGCTGCTTTTGTGCTTGTTTACAACTTCTGCTTTATACTTCACTTTTTTACCTTGCATTTCTAATAGTTCAAGTCCATCGCTAGCAGATATTGTCCGTTTTAGCCTGTTATGTATCGTCGTTAGCCTCACGGTTTTATAGTGCGTCTACT ATGGAAACTGCTCTCTCTGCTTCTTCTTCAGTTTCTTACTCCCTTTTTTCCTCTTCTTCTCAGCAGCCTCACAGGAGCTTCTTCAAGACCTCACATATCTTTGAGTTTAAGCTGAGAACGAGGAAAATGGAGCACACCCATTTGAAATTGGCTACCTCTGTCAACTGCAGCCACCCTGGACTGACTCAAGAAGTTGAAAGTAACAAGATGAACGTTGTGATAGAAACCGAAACGCGGCAAGACTTATTCGAGGAAATCAAACATCGATTTCTAAGCTTTAAAAGGAATACATATATGAAAAATTTCGAACATTTTCAACGTCTTTCCGATGCTCAATCACCCAAATTTTTGGTGATTTCTTGTGCAGATTCTAGAGTTTGTCCCTCGAACGTTTTAGGTTTCCAACCCGGAGAAGCCTTTCTTGTTCGCAATATCGCGAATTTGGTTGTACCCTTCGAGGCACGTATCTTGTTATTATCACAGAAAGGACCATCAGAAACACAAGCTGCATTGCAGTTCTCTGTTAACACGCTCGAAGTTGAAAACATTTTCGTCATTGGTCATAGCTGTTGTGGGGGAATTCGCGCACTTATGAGTATGCAAGACGAAAAACCGAGCTGTTTTATCACAAATTGGGTTATTAATGGAAAGACTGCAAAAATAAGAACAAAAGCTGCTGCTTCCAACCTCAACTTCGACCAGCAATGCCGACACTGTGAAAAGGAATCGCTCGACAATTCGCTGCTGAACTTGCTGACATACCCTTGGATTGAAGAAAAGGTGAAGAAAGGAAGCCTTGCCATTCATGGTGGCTACTACGACTTTGTCGACGGTACGTTCGAGAAATGGACTCTTGATTACGAAGCGAGCTGCGTTAAAGAGGATACTCGTCGACTGGCTGTAAAAAACCGAGAATTTTGGTCGTAG METALSASSSVSYSLFSSSSQQPHRSFFKTSHIFEFKLRTRKMEHTHLKLATSVNCSHPGLTQEVESNKMNVVIETETRQDLFEEIKHRFLSFKRNTYMKNFEHFQRLSDAQSPKFLVISCADSRVCPSNVLGFQPGEAFLVRNIANLVVPFEARILLLSQKGPSETQAALQFSVNTLEVENIFVIGHSCCGGIRALMSMQDEKPSCFITNWVINGKTAKIRTKAAASNLNFDQQCRHCEKESLDNSLLNLLTYPWIEEKVKKGSLAIHGGYYDFVDGTFEKWTLDYEASCVKEDTRRLAVKNREFWS
BLAST of Carg19729 vs. NCBI nr
Match: XP_022922512.1 (beta carbonic anhydrase 5, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 600.1 bits (1546), Expect = 4.2e-168 Identity = 300/308 (97.40%), Postives = 300/308 (97.40%), Query Frame = 0
BLAST of Carg19729 vs. NCBI nr
Match: XP_023551861.1 (beta carbonic anhydrase 5, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 595.5 bits (1534), Expect = 1.0e-166 Identity = 300/309 (97.09%), Postives = 300/309 (97.09%), Query Frame = 0
BLAST of Carg19729 vs. NCBI nr
Match: XP_022984231.1 (beta carbonic anhydrase 5, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 590.9 bits (1522), Expect = 2.5e-165 Identity = 294/308 (95.45%), Postives = 296/308 (96.10%), Query Frame = 0
BLAST of Carg19729 vs. NCBI nr
Match: XP_022922513.1 (beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita moschata] >XP_022922514.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita moschata] >XP_022922515.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita moschata] >XP_022922516.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita moschata] >XP_023551862.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551863.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551864.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551865.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 526.9 bits (1356), Expect = 4.5e-146 Identity = 258/266 (96.99%), Postives = 258/266 (96.99%), Query Frame = 0
BLAST of Carg19729 vs. NCBI nr
Match: XP_022984232.1 (beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita maxima] >XP_022984233.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita maxima] >XP_022984234.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita maxima] >XP_022984235.1 beta carbonic anhydrase 5, chloroplastic isoform X2 [Cucurbita maxima]) HSP 1 Score: 520.8 bits (1340), Expect = 3.2e-144 Identity = 254/266 (95.49%), Postives = 255/266 (95.86%), Query Frame = 0
BLAST of Carg19729 vs. TAIR10
Match: AT4G33580.2 (beta carbonic anhydrase 5) HSP 1 Score: 304.7 bits (779), Expect = 6.6e-83 Identity = 168/308 (54.55%), Postives = 219/308 (71.10%), Query Frame = 0
BLAST of Carg19729 vs. TAIR10
Match: AT1G58180.2 (beta carbonic anhydrase 6) HSP 1 Score: 257.7 bits (657), Expect = 9.2e-69 Identity = 126/241 (52.28%), Postives = 169/241 (70.12%), Query Frame = 0
BLAST of Carg19729 vs. TAIR10
Match: AT1G70410.2 (beta carbonic anhydrase 4) HSP 1 Score: 218.0 bits (554), Expect = 8.1e-57 Identity = 108/216 (50.00%), Postives = 148/216 (68.52%), Query Frame = 0
BLAST of Carg19729 vs. TAIR10
Match: AT1G23730.1 (beta carbonic anhydrase 3) HSP 1 Score: 208.8 bits (530), Expect = 4.9e-54 Identity = 108/231 (46.75%), Postives = 149/231 (64.50%), Query Frame = 0
BLAST of Carg19729 vs. TAIR10
Match: AT5G14740.1 (carbonic anhydrase 2) HSP 1 Score: 193.4 bits (490), Expect = 2.1e-49 Identity = 100/214 (46.73%), Postives = 140/214 (65.42%), Query Frame = 0
BLAST of Carg19729 vs. Swiss-Prot
Match: sp|Q94CE3|BCA5_ARATH (Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCA5 PE=2 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.7e-83 Identity = 169/307 (55.05%), Postives = 218/307 (71.01%), Query Frame = 0
BLAST of Carg19729 vs. Swiss-Prot
Match: sp|Q9C6F5|BCA6_ARATH (Beta carbonic anhydrase 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BCA6 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.7e-67 Identity = 126/241 (52.28%), Postives = 169/241 (70.12%), Query Frame = 0
BLAST of Carg19729 vs. Swiss-Prot
Match: sp|Q94CE4|BCA4_ARATH (Beta carbonic anhydrase 4 OS=Arabidopsis thaliana OX=3702 GN=BCA4 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.5e-55 Identity = 108/216 (50.00%), Postives = 148/216 (68.52%), Query Frame = 0
BLAST of Carg19729 vs. Swiss-Prot
Match: sp|Q9ZUC2|BCA3_ARATH (Beta carbonic anhydrase 3 OS=Arabidopsis thaliana OX=3702 GN=BCA3 PE=2 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 8.8e-53 Identity = 108/231 (46.75%), Postives = 149/231 (64.50%), Query Frame = 0
BLAST of Carg19729 vs. Swiss-Prot
Match: sp|P16016|CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2) HSP 1 Score: 200.3 bits (508), Expect = 3.1e-50 Identity = 103/209 (49.28%), Postives = 139/209 (66.51%), Query Frame = 0
BLAST of Carg19729 vs. TrEMBL
Match: tr|A0A1S3BZG2|A0A1S3BZG2_CUCME (Carbonic anhydrase OS=Cucumis melo OX=3656 GN=LOC103494863 PE=3 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 7.6e-142 Identity = 263/310 (84.84%), Postives = 278/310 (89.68%), Query Frame = 0
BLAST of Carg19729 vs. TrEMBL
Match: tr|A0A0A0L180|A0A0A0L180_CUCSA (Carbonic anhydrase OS=Cucumis sativus OX=3659 GN=Csa_4G182270 PE=3 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 2.4e-140 Identity = 261/310 (84.19%), Postives = 276/310 (89.03%), Query Frame = 0
BLAST of Carg19729 vs. TrEMBL
Match: tr|A0A1S3BY79|A0A1S3BY79_CUCME (Carbonic anhydrase OS=Cucumis melo OX=3656 GN=LOC103494863 PE=3 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 6.6e-130 Identity = 232/266 (87.22%), Postives = 244/266 (91.73%), Query Frame = 0
BLAST of Carg19729 vs. TrEMBL
Match: tr|A0A2P5FKJ5|A0A2P5FKJ5_9ROSA (Carbonic anhydrase OS=Trema orientalis OX=63057 GN=TorBCA5 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.1e-99 Identity = 189/317 (59.62%), Postives = 241/317 (76.03%), Query Frame = 0
BLAST of Carg19729 vs. TrEMBL
Match: tr|A0A2P5ALU2|A0A2P5ALU2_PARAD (Carbonic anhydrase OS=Parasponia andersonii OX=3476 GN=PanBCA5 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 4.6e-99 Identity = 188/317 (59.31%), Postives = 243/317 (76.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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