CmaCh16G002290 (gene) Cucurbita maxima (Rimu)

NameCmaCh16G002290
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr16 : 1050751 .. 1051248 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTCCTTCTCTTCTTCATCACAGTTTCCTCCGCCGTACACGGTCGGAAACTGCTCAACTCTCCAGACATGTATTGGGGATCGCCCAATGGAGGTGGGAACCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGCTGGGGTTACGGGTCGGGTTCCGGTCGCTCCGCGACTGGGTTCGGGAAAGGTTATGGATATGGATTTGGTTCAGGGTCAGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGTGGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCAGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG

mRNA sequence

ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTCCTTCTCTTCTTCATCACAGTTTCCTCCGCCGTACACGGTCGGAAACTGCTCAACTCTCCAGACATGTATTGGGGATCGCCCAATGGAGGTGGGAACCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGCTGGGGTTACGGGTCGGGTTCCGGTCGCTCCGCGACTGGGTTCGGGAAAGGTTATGGATATGGATTTGGTTCAGGGTCAGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGTGGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCAGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG

Coding sequence (CDS)

ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTCCTTCTCTTCTTCATCACAGTTTCCTCCGCCGTACACGGTCGGAAACTGCTCAACTCTCCAGACATGTATTGGGGATCGCCCAATGGAGGTGGGAACCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGCTGGGGTTACGGGTCGGGTTCCGGTCGCTCCGCGACTGGGTTCGGGAAAGGTTATGGATATGGATTTGGTTCAGGGTCAGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGTGGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCAGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG

Protein sequence

MKKPSPFHLSPLFFLLFFITVSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A0A0KXP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025120 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.9e-49
Identity = 128/174 (73.56%), Postives = 134/174 (77.01%), Query Frame = 1

Query: 1   MKKPSPFHLSPLFFLLFFITVSSAVH----GRKLLNSPDMYWGSPNGGG-----NPTGGY 60
           MK+PS FHLS LFFLLF +T SS V      RKLLN PDM WGSP+GGG     NPTG Y
Sbjct: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60

Query: 61  GSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGG 120
           GS HGPNWDYNWGWGSSPGSGWG+GSGSGRS TGFGKGYGYGFGSGSGSGSGYGYGSG G
Sbjct: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120

Query: 121 GAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
           GAHGGGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Sbjct: 121 GAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG 166

BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A0L9TYU9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g191800 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.4e-26
Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 1

Query: 12  LFFLLFFIT-VSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPG 71
           L FL FF+T  ++A  GRKLL   DM  G     GNPTGG GS  G NW+Y+WGWGS+PG
Sbjct: 12  LLFLFFFVTSTTAATGGRKLLF--DMSSGGAPSSGNPTGGTGSGRGANWEYSWGWGSAPG 71

Query: 72  SGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDS 131
           +G+G+GSGSGRS TGF +GYGYG+GSGSGSGSGYGYG G GGA GGGYGSG+G GNSG  
Sbjct: 72  TGYGFGSGSGRSPTGFARGYGYGYGSGSGSGSGYGYGWGSGGARGGGYGSGNGSGNSG-- 131

Query: 132 GDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
             GGGYGG +GGG  N       PSA +K KS HG
Sbjct: 132 --GGGYGGGNGGGDNNRI-----PSA-SKSKSNHG 154

BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A0S3SNR5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G103900 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.4e-26
Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 1

Query: 12  LFFLLFFIT-VSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPG 71
           L FL FF+T  ++A  GRKLL   DM  G     GNPTGG GS  G NW+Y+WGWGS+PG
Sbjct: 12  LLFLFFFVTSTTAATGGRKLLF--DMSSGGAPSSGNPTGGTGSGRGANWEYSWGWGSAPG 71

Query: 72  SGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDS 131
           +G+G+GSGSGRS TGF +GYGYG+GSGSGSGSGYGYG G GGA GGGYGSG+G GNSG  
Sbjct: 72  TGYGFGSGSGRSPTGFARGYGYGYGSGSGSGSGYGYGWGSGGARGGGYGSGNGSGNSG-- 131

Query: 132 GDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
             GGGYGG +GGG  N       PSA +K KS HG
Sbjct: 132 --GGGYGGGNGGGDNNRI-----PSA-SKSKSNHG 154

BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A061FZ07_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014817 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-26
Identity = 89/136 (65.44%), Postives = 100/136 (73.53%), Query Frame = 1

Query: 12  LFFLLFFITVSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGS 71
           L FLL    ++ A   RK L + +M        G+  G  GS HGPNWDY+WGWGSSPG 
Sbjct: 43  LIFLLSAFNITGARGDRKKLTASEMSTEPNAPSGDINGDSGSGHGPNWDYSWGWGSSPGG 102

Query: 72  GWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSG 131
           GWGYGSGSGRS  GFG+GYG+GFGSG+GSGSGYGYGSGG GAHGGGYG+GSG GNSG SG
Sbjct: 103 GWGYGSGSGRSPNGFGRGYGFGFGSGTGSGSGYGYGSGGDGAHGGGYGAGSGQGNSGGSG 162

Query: 132 DGGGYGGSSGGGYGNS 148
            GGG GGSSG G  N+
Sbjct: 163 YGGGSGGSSGSGNSNT 178

BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A058ZYU9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00118 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25
Identity = 89/140 (63.57%), Postives = 101/140 (72.14%), Query Frame = 1

Query: 4   PSPFHLSPLFFLLFFITVSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNW 63
           PS F +  +F  + F   SS V   + L+ P+M  G   G G+P G  GS HGPNWDY+W
Sbjct: 8   PSQFLIFAVFAAIAF---SSPVSSARTLDLPEMSTGPTGGTGSPDGASGSGHGPNWDYSW 67

Query: 64  GWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSG 123
           GWGSSPGSGWGYGSGSG S TGFGKG+GYGFGSG+GSGSG+GYGSGGGGAHGGG G  SG
Sbjct: 68  GWGSSPGSGWGYGSGSGHSPTGFGKGFGYGFGSGTGSGSGFGYGSGGGGAHGGGSGYESG 127

Query: 124 YGNSGDSGDGGGYGGSSGGG 144
            G SG +G GGG G S G G
Sbjct: 128 SGRSGGAGAGGGSGNSGGSG 144

BLAST of CmaCh16G002290 vs. TAIR10
Match: AT5G61660.1 (AT5G61660.1 glycine-rich protein)

HSP 1 Score: 104.8 bits (260), Expect = 5.3e-23
Identity = 70/94 (74.47%), Postives = 78/94 (82.98%), Query Frame = 1

Query: 45  GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGY 104
           GN  G  GS  GPNW+YNWGWGS+PGSGWGYG+GSGRS TG+G+G GYG+GSGSGSG+GY
Sbjct: 28  GNMPGESGSGRGPNWEYNWGWGSAPGSGWGYGAGSGRSPTGWGRGSGYGYGSGSGSGTGY 87

Query: 105 GYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGG 139
           GYGSGGGGA GGGYG GSG G SG  G GGG+ G
Sbjct: 88  GYGSGGGGARGGGYGYGSGNGRSGGGGGGGGFNG 121

BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|659107755|ref|XP_008453841.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 1.8e-49
Identity = 128/173 (73.99%), Postives = 133/173 (76.88%), Query Frame = 1

Query: 1   MKKPSPFHLSPLFFLLFFITVSSAVHG----RKLLNSPDMYWGSPNGGG----NPTGGYG 60
           MK+PS FHLS LFFLLF +T SS V G    RKLLN PDM WGSPNGGG    NPTG YG
Sbjct: 1   MKQPSKFHLSSLFFLLFVLTSSSTVSGAATPRKLLNFPDMSWGSPNGGGGGNGNPTGAYG 60

Query: 61  SAHGPNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGG 120
           S H PNWDYNWGWGSSPGSGWG+GSGSGRS TGFGKGYGYGFGSGSGSGSGYGYGSG GG
Sbjct: 61  SGHAPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGG 120

Query: 121 AHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
           AHGGGYGSGSGYGNSG        GG  GGGYG  SG EY     T+DK+R G
Sbjct: 121 AHGGGYGSGSGYGNSG--------GGGGGGGYGGPSGDEYRSPTTTRDKNRQG 165

BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|449458319|ref|XP_004146895.1| (PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 7.0e-49
Identity = 128/174 (73.56%), Postives = 134/174 (77.01%), Query Frame = 1

Query: 1   MKKPSPFHLSPLFFLLFFITVSSAVH----GRKLLNSPDMYWGSPNGGG-----NPTGGY 60
           MK+PS FHLS LFFLLF +T SS V      RKLLN PDM WGSP+GGG     NPTG Y
Sbjct: 1   MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60

Query: 61  GSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGG 120
           GS HGPNWDYNWGWGSSPGSGWG+GSGSGRS TGFGKGYGYGFGSGSGSGSGYGYGSG G
Sbjct: 61  GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120

Query: 121 GAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
           GAHGGGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Sbjct: 121 GAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG 166

BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|920692543|gb|KOM35768.1| (hypothetical protein LR48_Vigan02g191800 [Vigna angularis])

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-26
Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 1

Query: 12  LFFLLFFIT-VSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPG 71
           L FL FF+T  ++A  GRKLL   DM  G     GNPTGG GS  G NW+Y+WGWGS+PG
Sbjct: 12  LLFLFFFVTSTTAATGGRKLLF--DMSSGGAPSSGNPTGGTGSGRGANWEYSWGWGSAPG 71

Query: 72  SGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDS 131
           +G+G+GSGSGRS TGF +GYGYG+GSGSGSGSGYGYG G GGA GGGYGSG+G GNSG  
Sbjct: 72  TGYGFGSGSGRSPTGFARGYGYGYGSGSGSGSGYGYGWGSGGARGGGYGSGNGSGNSG-- 131

Query: 132 GDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
             GGGYGG +GGG  N       PSA +K KS HG
Sbjct: 132 --GGGYGGGNGGGDNNRI-----PSA-SKSKSNHG 154

BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|985465711|ref|XP_006490032.2| (PREDICTED: glycine-rich cell wall structural protein 2-like [Citrus sinensis])

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-26
Identity = 92/159 (57.86%), Postives = 106/159 (66.67%), Query Frame = 1

Query: 7   FHLSPLFFLLFFITVSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWG 66
           F +    F   F+T        ++    D   G+    G+  G  GSAHGPNWD NWGWG
Sbjct: 45  FFIFEASFAFDFVTRGGTADSGEIEKIVDSPMGTNGPSGSSHGATGSAHGPNWDSNWGWG 104

Query: 67  SSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGN 126
           SSPGSGWGYGSGSGRS  GFG+G+G+GFGSGSGSGSGYGYGSG GGAHGGGYGSGSG GN
Sbjct: 105 SSPGSGWGYGSGSGRSPNGFGRGFGFGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGSGN 164

Query: 127 SGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG 166
           S   G GGG GG+ GGGYG+ S  +       +D+S HG
Sbjct: 165 SAGGGFGGGSGGAGGGGYGSHSPSD------ARDRSHHG 197

BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|590671094|ref|XP_007038239.1| (Uncharacterized protein TCM_014817 [Theobroma cacao])

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-26
Identity = 89/136 (65.44%), Postives = 100/136 (73.53%), Query Frame = 1

Query: 12  LFFLLFFITVSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGS 71
           L FLL    ++ A   RK L + +M        G+  G  GS HGPNWDY+WGWGSSPG 
Sbjct: 43  LIFLLSAFNITGARGDRKKLTASEMSTEPNAPSGDINGDSGSGHGPNWDYSWGWGSSPGG 102

Query: 72  GWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSG 131
           GWGYGSGSGRS  GFG+GYG+GFGSG+GSGSGYGYGSGG GAHGGGYG+GSG GNSG SG
Sbjct: 103 GWGYGSGSGRSPNGFGRGYGFGFGSGTGSGSGYGYGSGGDGAHGGGYGAGSGQGNSGGSG 162

Query: 132 DGGGYGGSSGGGYGNS 148
            GGG GGSSG G  N+
Sbjct: 163 YGGGSGGSSGSGNSNT 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KXP2_CUCSA4.9e-4973.56Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025120 PE=4 SV=1[more]
A0A0L9TYU9_PHAAN3.4e-2663.23Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g191800 PE=4 SV=1[more]
A0A0S3SNR5_PHAAN3.4e-2663.23Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G103900 PE=... [more]
A0A061FZ07_THECC5.8e-2665.44Uncharacterized protein OS=Theobroma cacao GN=TCM_014817 PE=4 SV=1[more]
A0A058ZYU9_EUCGR1.3e-2563.57Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00118 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G61660.15.3e-2374.47 glycine-rich protein[more]
Match NameE-valueIdentityDescription
gi|659107755|ref|XP_008453841.1|1.8e-4973.99PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo][more]
gi|449458319|ref|XP_004146895.1|7.0e-4973.56PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis sativus][more]
gi|920692543|gb|KOM35768.1|4.9e-2663.23hypothetical protein LR48_Vigan02g191800 [Vigna angularis][more]
gi|985465711|ref|XP_006490032.2|6.3e-2657.86PREDICTED: glycine-rich cell wall structural protein 2-like [Citrus sinensis][more]
gi|590671094|ref|XP_007038239.1|8.3e-2665.44Uncharacterized protein TCM_014817 [Theobroma cacao][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G002290.1CmaCh16G002290.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G002290CsaV3_4G004360Cucumber (Chinese Long) v3cmacucB0387
CmaCh16G002290Carg16770Silver-seed gourdcarcmaB1206
The following gene(s) are paralogous to this gene:

None