CmaCh16G002290 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTCCTTCTCTTCTTCATCACAGTTTCCTCCGCCGTACACGGTCGGAAACTGCTCAACTCTCCAGACATGTATTGGGGATCGCCCAATGGAGGTGGGAACCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGCTGGGGTTACGGGTCGGGTTCCGGTCGCTCCGCGACTGGGTTCGGGAAAGGTTATGGATATGGATTTGGTTCAGGGTCAGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGTGGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCAGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTCCTTCTCTTCTTCATCACAGTTTCCTCCGCCGTACACGGTCGGAAACTGCTCAACTCTCCAGACATGTATTGGGGATCGCCCAATGGAGGTGGGAACCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGCTGGGGTTACGGGTCGGGTTCCGGTCGCTCCGCGACTGGGTTCGGGAAAGGTTATGGATATGGATTTGGTTCAGGGTCAGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGTGGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCAGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTCCTTCTCTTCTTCATCACAGTTTCCTCCGCCGTACACGGTCGGAAACTGCTCAACTCTCCAGACATGTATTGGGGATCGCCCAATGGAGGTGGGAACCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGCTGGGGTTACGGGTCGGGTTCCGGTCGCTCCGCGACTGGGTTCGGGAAAGGTTATGGATATGGATTTGGTTCAGGGTCAGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGTGGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCAGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG MKKPSPFHLSPLFFLLFFITVSSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A0A0KXP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025120 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 4.9e-49 Identity = 128/174 (73.56%), Postives = 134/174 (77.01%), Query Frame = 1
BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A0L9TYU9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g191800 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.4e-26 Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 1
BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A0S3SNR5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G103900 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.4e-26 Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 1
BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A061FZ07_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014817 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.8e-26 Identity = 89/136 (65.44%), Postives = 100/136 (73.53%), Query Frame = 1
BLAST of CmaCh16G002290 vs. TrEMBL
Match: A0A058ZYU9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00118 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25 Identity = 89/140 (63.57%), Postives = 101/140 (72.14%), Query Frame = 1
BLAST of CmaCh16G002290 vs. TAIR10
Match: AT5G61660.1 (AT5G61660.1 glycine-rich protein) HSP 1 Score: 104.8 bits (260), Expect = 5.3e-23 Identity = 70/94 (74.47%), Postives = 78/94 (82.98%), Query Frame = 1
BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|659107755|ref|XP_008453841.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]) HSP 1 Score: 204.1 bits (518), Expect = 1.8e-49 Identity = 128/173 (73.99%), Postives = 133/173 (76.88%), Query Frame = 1
BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|449458319|ref|XP_004146895.1| (PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis sativus]) HSP 1 Score: 202.2 bits (513), Expect = 7.0e-49 Identity = 128/174 (73.56%), Postives = 134/174 (77.01%), Query Frame = 1
BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|920692543|gb|KOM35768.1| (hypothetical protein LR48_Vigan02g191800 [Vigna angularis]) HSP 1 Score: 126.3 bits (316), Expect = 4.9e-26 Identity = 98/155 (63.23%), Postives = 112/155 (72.26%), Query Frame = 1
BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|985465711|ref|XP_006490032.2| (PREDICTED: glycine-rich cell wall structural protein 2-like [Citrus sinensis]) HSP 1 Score: 125.9 bits (315), Expect = 6.3e-26 Identity = 92/159 (57.86%), Postives = 106/159 (66.67%), Query Frame = 1
BLAST of CmaCh16G002290 vs. NCBI nr
Match: gi|590671094|ref|XP_007038239.1| (Uncharacterized protein TCM_014817 [Theobroma cacao]) HSP 1 Score: 125.6 bits (314), Expect = 8.3e-26 Identity = 89/136 (65.44%), Postives = 100/136 (73.53%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |