CmaCh16G001110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G001110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Sec-independent protein translocase protein TatA
Location	Cma_Chr16 : 500726 .. 503809 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATTCCCATAACCATGGCCTCCAAATTTCCAGTTCCCACATTCCCATTTTCCCCATCGTCTTCATCTTCATCTTCCTCGTCCATCTTATACCCCAAAACCCCCAAAATTCGTCTCTCCTTGTGTAATTTCCCTCTGCATCTCCGGCTTTACTCTCCATGGAATGGTTTAAAGCATTTGGGTATTTCAAGCAGAGGAAGGTTTCCCGGTATGGATATACTTTTTGATGATTGATTCAAGTAATAGTTCATATTTGTTTGAATTAAACGTTTATTGATCTTTGTTCTTGTTATGTTGTCTAAAATGGTGTTGTTGTAGAGAGGAGGAAGAGAATTCCTAAGGGGAAGGCTGTTTTTGCATCTCTGTTTGGGGTTGGAGCTCCGGAGGCATTGGTTATTGGGGTTGTGGCTCTGTTGGTTTTTGGTCCCAAGGGCCTTGCTGAGGTGAGTGGTATAAATCATGTAGATGACTGAAATTTTGGAAATATTTGGCTGCCTCTGATGTGTTCTTTTACACATTTTAACTTGTTGCGGAACCTGAATATTGAAGTATTACATTTCATTCTCGTTTAAGGTATCTGTTAGGCTTTGGAGTTGTGCTGGGAATAGCAGCATGAAACTTCACTTACATTAATACTCTAGTCTTTATTGTCTTGAGCCACTGCGGAGAATCACCAGGTTGTATTGTTGTTGATGTCAACAAGGATAGCTTCTAATGTTATTGCTCAGCCTTCGATACTAGGGAGAGATTTCCACACCTTATAAGAAATGTTTCATTCTCATCTCCAATCAATATGGGATCTCACGATCCACCCTCCTTGGGGGCTCCTCGCTGGCACATCGCTCGGTGTCTGGCTTTAATCCATTTGTAACCGCACAAGCCTACTGCTAACTGATATTATCTACTTTGGCCTATTACGTATCACCGTCAACCTTACGGTGTTAAAATGCGTCTACTAGGGATAGGTTTCCACAACTTATAAGGAATGTTTCGTTCCCCTTTCCAACCAACGTGGGATCTCACAATCCACCCTCCTTAGGGTCTAGCTTCCTCACTAGCACACCGCTTGGTGTCTAGCTCTAATACCATTTGTAACAGCCTAAGCCCACCGCCGATAGATATTGTCCGCTTTGGCCCGTTATGTATCCTCGTCAACCTCACGATTTTAAAACGCGTCTACTAGGGAGAGATTTCCACACCTTATAAGGAATGTTTCGTTCCCTTCTCCAACCAACGTAAGATCTCACAATCCATCCCCCTTGGGGGCCAGCGTCCTCACTAGCACACTGTTCGGTGTCTAACTTTAATACCATTTGTAACAATTCAAGCCCACCGATAGCAGATATTATCCGTTTTGGTCCGTTACGTATCACAGTCAGCTTCATAGTTTTAAAACGCGTCTAATAGGGAGAGGTTTCCACACCTTTATAAGGAATGTTTCATTCCCCTCTCCAACGGACGTGGGATCTCACATGAACTATCCTAACCCCACCCATCAAACAAAAGGGAATTTGTTTTTGATTGAGAGCATCTAGGATATAATAAGACCCTTTGCGTCGTATAAAAAAAAAACTCAAAGTGACATTGATTACCAAGTCTTTACAAAAACCTGAAAACCATTTGGACAGGTTTGCTGTAAAGGATATCAGTAAGTACTTTCGTTGGACTGGAATTTAGTTTACTTATTTATATGCCAGGTTGCTCGAACTTTGGGGAAGACCTTACGTACATTTCAACCCACTATAAGAGAACTTCAGGTAATCATATTTCGGTTTTTGAGATTTTCCAGCATCACTTCTTAAAGACCTTCTTGTGGTTTTTTGCTCTTCATGTATGTCTGTAGGACGTTTCTCGAGAATTCAAGACCACACTTGAGCAAGAAATTGGTCTCGACGAAATCTCGAGTCCAGTCGAAAGCTCATACAATTCAAGCAAATCAGATACCTTCTCAAACCCACCTTTTGTTCCTAAAGCAGAAGAGTCTTTTGCAGTGGCTGAACCAAGTGAGTGGTTAACTTATTTGTCATCCATATTTTTATTTATTATCAGCACTTGTAGTATTCTAGGGAAAGATTTCAAAGCTACATAGAAAAAGTAGAATGCCAAAGGGGAAAAGAATATTGGTAATCAGCCTTGGTTCGCCGTCGGGCATCGTGTCTACGAATGATACGATTGGGTTCAATCATTAGGGATATAGAATCATCATTCTGTCAGCCTCGACTATTATACGATAATGAAAGATCGTTTTCTTATGTATATAAACAGCTGATAATTCTTTATCAGCAAGCAAAGCATACACCACTGAAGAGTACCTTAAGATTGCTAAAACCAAATCACTTTGGTCCTATTTGGTAGCTTTTTGGATGAACCAGTGTTTATAAGCTTTGTTTTAAAAATGCGCTATCACTCTAACATGTATGAACTTGTAACAGGAGGCGTCGAAGCACCTGTCGTGGTGGCTCCCGAACTCCAAAATCTTGAAGCAGGTAAGGTTGAGGAGTCTACTGCCTCAAGTCCTGGAGCTGAAAAATAAAGTTATTAGAATCGATTTTGGATGGAGGAGTATTTCTTTTAGGTGGTCGATTTAGAAAATTATGTGTTAGTGATTGAAGCTCCTAGGAGAGAAATGATTCTATTAGTGTCTTGGAACTTAACCCGCTTATTGATCTGGTCATGATGAAATGGGGTAAATGGTCGAGGCTACTTGAAGGCTTACTTTTTGGTTGACAGGTATTGTGACAGGTATTCCCATGATCGATTCAATAGATCTTTTCTTTTTCCGTTCATATTTCGAATTGGGTTTATCCTTGTAGTAATCGTATGAACACGATGGTAGTATAAACTCGATGGTACCCATTCAGATTCAACGTGAGAAAAGAACCATGCAGCAACCTGAGCCCTAAAGAGGAGAGGGGCAGGAGCACTCCAATTCGAAAGGCGTGCCGTTTGAAAGACTATATATGTGTATATATATATATATAATCCAAAGTTTTGTAACAAATTTGCCATAATTAAAAATATGCATAGATATTACAAGGTTAAACGAGCACAATAAGAAAAGAAGAAAAAGACAAGGAATATTAG

mRNA sequence

ATAATTCCCATAACCATGGCCTCCAAATTTCCAGTTCCCACATTCCCATTTTCCCCATCGTCTTCATCTTCATCTTCCTCGTCCATCTTATACCCCAAAACCCCCAAAATTCGTCTCTCCTTGTGTAATTTCCCTCTGCATCTCCGGCTTTACTCTCCATGGAATGGTTTAAAGCATTTGGGTATTTCAAGCAGAGGAAGGTTTCCCGAGAGGAGGAAGAGAATTCCTAAGGGGAAGGCTGTTTTTGCATCTCTGTTTGGGGTTGGAGCTCCGGAGGCATTGGTTATTGGGGTTGTGGCTCTGTTGGTTTTTGGTCCCAAGGGCCTTGCTGAGGTTGCTCGAACTTTGGGGAAGACCTTACGTACATTTCAACCCACTATAAGAGAACTTCAGGACGTTTCTCGAGAATTCAAGACCACACTTGAGCAAGAAATTGGTCTCGACGAAATCTCGAGTCCAGTCGAAAGCTCATACAATTCAAGCAAATCAGATACCTTCTCAAACCCACCTTTTGTTCCTAAAGCAGAAGAGTCTTTTGCAGTGGCTGAACCAAGAGGCGTCGAAGCACCTGTCGTGGTGGCTCCCGAACTCCAAAATCTTGAAGCAGGTAAGGTTGAGGAGTCTACTGCCTCAAGTCCTGGAGCTGAAAAATAAAGTTATTAGAATCGATTTTGGATGGAGGAGTATTTCTTTTAGGTGGTCGATTTAGAAAATTATGTGTTAGTGATTGAAGCTCCTAGGAGAGAAATGATTCTATTAGTGTCTTGGAACTTAACCCGCTTATTGATCTGGTCATGATGAAATGGGGTAAATGGTCGAGGCTACTTGAAGGCTTACTTTTTGGTTGACAGGTATTGTGACAGGTATTCCCATGATCGATTCAATAGATCTTTTCTTTTTCCGTTCATATTTCGAATTGGGTTTATCCTTGTAGTAATCGTATGAACACGATGGTAGTATAAACTCGATGGTACCCATTCAGATTCAACGTGAGAAAAGAACCATGCAGCAACCTGAGCCCTAAAGAGGAGAGGGGCAGGAGCACTCCAATTCGAAAGGCGTGCCGTTTGAAAGACTATATATGTGTATATATATATATATAATCCAAAGTTTTGTAACAAATTTGCCATAATTAAAAATATGCATAGATATTACAAGGTTAAACGAGCACAATAAGAAAAGAAGAAAAAGACAAGGAATATTAG

Coding sequence (CDS)

ATGGCCTCCAAATTTCCAGTTCCCACATTCCCATTTTCCCCATCGTCTTCATCTTCATCTTCCTCGTCCATCTTATACCCCAAAACCCCCAAAATTCGTCTCTCCTTGTGTAATTTCCCTCTGCATCTCCGGCTTTACTCTCCATGGAATGGTTTAAAGCATTTGGGTATTTCAAGCAGAGGAAGGTTTCCCGAGAGGAGGAAGAGAATTCCTAAGGGGAAGGCTGTTTTTGCATCTCTGTTTGGGGTTGGAGCTCCGGAGGCATTGGTTATTGGGGTTGTGGCTCTGTTGGTTTTTGGTCCCAAGGGCCTTGCTGAGGTTGCTCGAACTTTGGGGAAGACCTTACGTACATTTCAACCCACTATAAGAGAACTTCAGGACGTTTCTCGAGAATTCAAGACCACACTTGAGCAAGAAATTGGTCTCGACGAAATCTCGAGTCCAGTCGAAAGCTCATACAATTCAAGCAAATCAGATACCTTCTCAAACCCACCTTTTGTTCCTAAAGCAGAAGAGTCTTTTGCAGTGGCTGAACCAAGAGGCGTCGAAGCACCTGTCGTGGTGGCTCCCGAACTCCAAAATCTTGAAGCAGGTAAGGTTGAGGAGTCTACTGCCTCAAGTCCTGGAGCTGAAAAATAA

Protein sequence

MASKFPVPTFPFSPSSSSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWNGLKHLGISSRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAEESFAVAEPRGVEAPVVVAPELQNLEAGKVEESTASSPGAEK

Homology

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BLAST of CmaCh16G001110 vs. Swiss-Prot
Match: TATB_PEA (Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum GN=TATB PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-39
Identity = 97/183 (53.01%), Postives = 124/183 (67.76%), Query Frame = 1


Query: 17  SSSSSSSILYPK--TPKIRLSLCN------------FPLHLRLYSPWNGLKHLGISSRGR 76
           +SS+S+ +L PK  T  + LS C             + L  RL++PWNG K LG S++ +
Sbjct: 8   ASSTSTMLLCPKLGTCSMSLSTCTPTSHSKIHHFHLYSLGKRLFTPWNGFKQLGFSTKPK 67

Query: 77  FPE----RRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTF 136
            P      +K   KGK V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR F
Sbjct: 68  KPLFHFIGKKGRCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREF 127

Query: 137 QPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAEESFAVAE 182
           QPTIRE+QDVSREFK+TLE+EIG+D+I++P++S+Y+S+  +T   P        S    +
Sbjct: 128 QPTIREIQDVSREFKSTLEREIGIDDITNPLQSTYSSNVRNTTPTPSATEITNNSQTAVD 187

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BLAST of CmaCh16G001110 vs. Swiss-Prot
Match: TATB_ARATH (Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis thaliana GN=TATB PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.6e-35
Identity = 102/195 (52.31%), Postives = 124/195 (63.59%), Query Frame = 1


Query: 16  SSSSSSSSIL------YP------KTPKIRLSLCNFPLHLRLYSPWNGLKHLGIS--SRG 75
           +SSSSS +I       YP      K  K  LS     L    +SP+ GLKHLGIS   + 
Sbjct: 9   ASSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISISPKS 68

Query: 76  RFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPT 135
             PE+++R  K   + ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLRTFQPT
Sbjct: 69  SNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPT 128

Query: 136 IRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFS-----NPPFVPKAEESFAV 192
           IRELQDVSR+FK+TLE+EIGLD+IS+P  + YN ++++         PP VP  E     
Sbjct: 129 IRELQDVSRDFKSTLEREIGLDDISTP--NVYNQNRTNPVQPPPPPPPPSVPSTEAPVTA 188

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BLAST of CmaCh16G001110 vs. Swiss-Prot
Match: TATB_ORYSJ (Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa subsp. japonica GN=TATB PE=2 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 5.1e-28
Identity = 81/160 (50.62%), Postives = 97/160 (60.62%), Query Frame = 1


Query: 53  KHLGISSRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLG 112
           +H     R R     KR  +G  V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LG
Sbjct: 52  RHHRFLLRRRRRTESKRTSRGTGVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLG 111

Query: 113 KTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAEE 172
           KTLR FQPTIRELQDVSREF++TLE+EIGLDE+  P   +Y     +  S  P + ++ +
Sbjct: 112 KTLRAFQPTIRELQDVSREFRSTLEREIGLDEV--PPSMNYRPPTMNN-SQQPAIDQSSD 171

Query: 173 SFAVAEPRGVEAPVVVAPELQNLEAGKVEESTASSPGAEK 213
               A P   E  + V  E     A     +    P  +K
Sbjct: 172 DKPEAAPYTSEELIKVTEEQLAASAAAAWNTQEPPPSQQK 208

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BLAST of CmaCh16G001110 vs. Swiss-Prot
Match: TATB_MAIZE (Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays GN=TATB PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 80/171 (46.78%), Postives = 98/171 (57.31%), Query Frame = 1


Query: 49  WNGLKHLGISSR--GRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAE 108
           W G++   I +R    F     R  +   + ASLFGVGAPEALVIGVVALLVFGPKGLAE
Sbjct: 37  WKGVEWGSIQTRMVSSFVAVGSRTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAE 96

Query: 109 VARTLGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISS-----PVESSYNSS-KSDT 168
           VAR LGKTLR FQPTIRELQDVSREF++TLE+EIG+DE+S      P   + N    +D 
Sbjct: 97  VARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGIDEVSQSTNYRPTTMNNNQQPAADP 156

Query: 169 FSNPPFVPKAEESFAVAEPRGVEAPVVVAPELQNLEAGKVEESTASSPGAE 212
              P   P   E         + A    A   Q     + +E   ++P +E
Sbjct: 157 NVKPEPAPYTSEELMKVTEEQIAASAAAAWNPQQPATSQQQEEAPTTPRSE 207

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BLAST of CmaCh16G001110 vs. Swiss-Prot
Match: TATA_THEEB (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) GN=tatA PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.3e-09
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 79  SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQD-VSREFKTTLE 138
           ++FG+G PE +VI VVALL+FGPK L E+ R+LGKT R F+   RE QD + R+     E
Sbjct: 2   NVFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEE 61

Query: 139 QEIGLDEISSPVESS 153
           ++    E  SP E S
Sbjct: 62  EQQAKAEAESPREIS 76

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BLAST of CmaCh16G001110 vs. TrEMBL
Match: A0A0A0L6M5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183320 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 172/278 (61.87%), Postives = 182/278 (65.47%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS----------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWN 60
           M SK  V T PF PSS          S+S+SSSILYP TPK  LSLCNFPL LRL+SPW 
Sbjct: 1   MTSKISVSTLPFPPSSPTSTCSRLSPSTSTSSSILYPITPKFHLSLCNFPLGLRLFSPWT 60

Query: 61  GLKHLGISSRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120
           GLKHLGIS+RGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART
Sbjct: 61  GLKHLGISTRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120

Query: 121 LGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKA 180
           LGKTLR FQPTIRELQDVSREFKTTLE+EIGLDEI S V SSYN+SKS T+SNPP V KA
Sbjct: 121 LGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIESSVNSSYNASKS-TYSNPPSVSKA 180

Query: 181 E------------ESFAVAEPRG------------------------------------- 210
           E            E  +VAEP                                       
Sbjct: 181 EEFVSNSPFLPKAEELSVAEPTDDSSSASKAYSSEEYLKVTEEQLKAQDELQTNFVAQNQ 240

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BLAST of CmaCh16G001110 vs. TrEMBL
Match: I3S6U9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-42
Identity = 104/170 (61.18%), Postives = 123/170 (72.35%), Query Frame = 1


Query: 18  SSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWNGLKHLGISSRGR--FPERRKRIPKGKA 77
           S S S+  + K  +  LS    P+   L+SPWNGLKHLGIS++ +  F   RK   KGK 
Sbjct: 23  SLSPSATPHTKIQRFHLSSWLSPMGRSLFSPWNGLKHLGISTKPKPLFHIDRKGRCKGKL 82

Query: 78  VFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSREFKTT 137
           V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLRTFQPTIRELQDVSREFK+T
Sbjct: 83  VYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQDVSREFKST 142

Query: 138 LEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAEESFAVAEPRGVEAP 186
           LE+EIGLD+ISSP ++ YNS+  +T S P      + S    +P G + P
Sbjct: 143 LEREIGLDDISSPTQNPYNSNFQNTTSTPSSTDSTKSSPIAVDPDGTQDP 192

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BLAST of CmaCh16G001110 vs. TrEMBL
Match: A0A058ZXI3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00283 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41
Identity = 112/197 (56.85%), Postives = 131/197 (66.50%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS-----------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPW 60
           +AS  P P   F  SS           SSSSSS++  P   K   S+   PL+LR +SPW
Sbjct: 3   VASPMPAPAAIFCSSSNCSRPTLCTLSSSSSSSAVSCPGASKFGGSILFSPLNLRKFSPW 62

Query: 61  NGLKHLGISSRGRFPERRKRI-PKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVA 120
           NGLKHLGIS R +      R   KG  V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVA
Sbjct: 63  NGLKHLGISLRPKSLRMGGRSRSKGMVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVA 122

Query: 121 RTLGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVP 180
           R LGKTLR FQPTIRELQ+VSREFK+TLE+EIGLDEIS   E + N+S   + S+PP V 
Sbjct: 123 RNLGKTLRAFQPTIRELQEVSREFKSTLEKEIGLDEIS---EQNMNNSSRTSASSPPLVD 182

Query: 181 KAEESFAVAEPRGVEAP 186
           + +E   V +  G  +P
Sbjct: 183 RGKEQETVVDLNGAPSP 196

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BLAST of CmaCh16G001110 vs. TrEMBL
Match: A0A067E9T8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023111mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40
Identity = 102/169 (60.36%), Postives = 123/169 (72.78%), Query Frame = 1


Query: 16  SSSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWNGLKHLGISSRGR---FPERRKRIPK 75
           S SSS++ I  PKT    LS     L   L+S W+GLKHLGIS   +     E+++R  +
Sbjct: 56  SLSSSATPISCPKTTNFHLSTTIPQLGSSLFSQWSGLKHLGISVTPKSVNLLEKKRRCKR 115

Query: 76  GKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSREF 135
           G   +ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRELQDVSREF
Sbjct: 116 G-VFYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREF 175

Query: 136 KTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAEESFAVAEPRG 182
           K+TLE+EIGLD+IS+  ++  N +++DT S PP V   E+S  VA+P G
Sbjct: 176 KSTLEREIGLDDISTSTQNPNNLNRTDTMSTPPSVTSTEDSQTVADPNG 223

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BLAST of CmaCh16G001110 vs. TrEMBL
Match: A0A067EDJ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023111mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40
Identity = 102/169 (60.36%), Postives = 123/169 (72.78%), Query Frame = 1


Query: 16  SSSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWNGLKHLGISSRGR---FPERRKRIPK 75
           S SSS++ I  PKT    LS     L   L+S W+GLKHLGIS   +     E+++R  +
Sbjct: 56  SLSSSATPISCPKTTNFHLSTTIPQLGSSLFSQWSGLKHLGISVTPKSVNLLEKKRRCKR 115

Query: 76  GKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSREF 135
           G   +ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRELQDVSREF
Sbjct: 116 G-VFYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREF 175

Query: 136 KTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAEESFAVAEPRG 182
           K+TLE+EIGLD+IS+  ++  N +++DT S PP V   E+S  VA+P G
Sbjct: 176 KSTLEREIGLDDISTSTQNPNNLNRTDTMSTPPSVTSTEDSQTVADPNG 223

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BLAST of CmaCh16G001110 vs. TAIR10
Match: AT5G52440.1 (AT5G52440.1 Bacterial sec-independent translocation protein mttA/Hcf106)

HSP 1 Score: 148.3 bits (373), Expect = 5.4e-36
Identity = 102/195 (52.31%), Postives = 124/195 (63.59%), Query Frame = 1


Query: 16  SSSSSSSSIL------YP------KTPKIRLSLCNFPLHLRLYSPWNGLKHLGIS--SRG 75
           +SSSSS +I       YP      K  K  LS     L    +SP+ GLKHLGIS   + 
Sbjct: 9   ASSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISISPKS 68

Query: 76  RFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPT 135
             PE+++R  K   + ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLRTFQPT
Sbjct: 69  SNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPT 128

Query: 136 IRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFS-----NPPFVPKAEESFAV 192
           IRELQDVSR+FK+TLE+EIGLD+IS+P  + YN ++++         PP VP  E     
Sbjct: 129 IRELQDVSRDFKSTLEREIGLDDISTP--NVYNQNRTNPVQPPPPPPPPSVPSTEAPVTA 188

[Close]

BLAST of CmaCh16G001110 vs. TAIR10
Match: AT5G28750.1 (AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf106)

HSP 1 Score: 51.6 bits (122), Expect = 6.9e-07
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 1


Query: 79  SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSREFKTTLEQ 138
           +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ   +E +    E KT  E+
Sbjct: 62  ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFES---ELKTEPEE 121

Query: 139 EIGLDEISSPVESSYNSSKSDT 161
            +     SS V +S    +  T
Sbjct: 122 SVA---ESSQVATSNKEEEKKT 137

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BLAST of CmaCh16G001110 vs. NCBI nr
Match: gi|659077565|ref|XP_008439273.1| (PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.4e-73
Identity = 175/264 (66.29%), Postives = 184/264 (69.70%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS-------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWNGLK 60
           MASK  V TFPFSPS        S+SSSSSILYP+TPK  LSLCNFPL LRL+SPW GLK
Sbjct: 1   MASKISVSTFPFSPSPTCSRLSPSTSSSSSILYPRTPKFHLSLCNFPLGLRLFSPWTGLK 60

Query: 61  HLGISSRGR--FPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 120
           HLGIS+RGR  FPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL
Sbjct: 61  HLGISTRGRSPFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 120

Query: 121 GKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAE 180
           GKTLR FQPTIRELQDVSREFKTTLE+EIGLDEI S V SSYN+SKS T+SNPP V KAE
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIESSVNSSYNASKS-TYSNPPSVSKAE 180

Query: 181 ESFAVAEPRG----------------------------------------------VEAP 210
           E  +VAEP                                                VE  
Sbjct: 181 E-LSVAEPNDFSSASKAYSSEEYLKVTEEQLKAQGQLQTDFAAQSQSGSQVQREGTVEEL 240

[Close]

BLAST of CmaCh16G001110 vs. NCBI nr
Match: gi|659077563|ref|XP_008439272.1| (PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 2.3e-73
Identity = 175/265 (66.04%), Postives = 184/265 (69.43%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS-------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWNGLK 60
           MASK  V TFPFSPS        S+SSSSSILYP+TPK  LSLCNFPL LRL+SPW GLK
Sbjct: 1   MASKISVSTFPFSPSPTCSRLSPSTSSSSSILYPRTPKFHLSLCNFPLGLRLFSPWTGLK 60

Query: 61  HLGISSRGR--FPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 120
           HLGIS+RGR  FPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL
Sbjct: 61  HLGISTRGRSPFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 120

Query: 121 GKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKAE 180
           GKTLR FQPTIRELQDVSREFKTTLE+EIGLDEI S V SSYN+SKS T+SNPP V KAE
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIESSVNSSYNASKS-TYSNPPSVSKAE 180

Query: 181 ESFAVAEPRG-----------------------------------------------VEA 210
           E  +VAEP                                                 VE 
Sbjct: 181 E-LSVAEPTDDFSSASKAYSSEEYLKVTEEQLKAQGQLQTDFAAQSQSGSQVQREGTVEE 240

[Close]

BLAST of CmaCh16G001110 vs. NCBI nr
Match: gi|778679659|ref|XP_011651175.1| (PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 5.2e-73
Identity = 172/265 (64.91%), Postives = 182/265 (68.68%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS----------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWN 60
           M SK  V T PF PSS          S+S+SSSILYP TPK  LSLCNFPL LRL+SPW 
Sbjct: 1   MTSKISVSTLPFPPSSPTSTCSRLSPSTSTSSSILYPITPKFHLSLCNFPLGLRLFSPWT 60

Query: 61  GLKHLGISSRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120
           GLKHLGIS+RGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART
Sbjct: 61  GLKHLGISTRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120

Query: 121 LGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKA 180
           LGKTLR FQPTIRELQDVSREFKTTLE+EIGLDEI S V SSYN+SKS T+SNPP V KA
Sbjct: 121 LGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIESSVNSSYNASKS-TYSNPPSVSKA 180

Query: 181 EESFAVAEPRG----------------------------------------------VEA 210
           EE  +VAEP                                                VE 
Sbjct: 181 EE-LSVAEPNDSSSASKAYSSEEYLKVTEEQLKAQDELQTNFVAQNQSGSQVQREGTVEE 240

[Close]

BLAST of CmaCh16G001110 vs. NCBI nr
Match: gi|778679656|ref|XP_011651174.1| (PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 9.8e-72
Identity = 172/277 (62.09%), Postives = 182/277 (65.70%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS----------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWN 60
           M SK  V T PF PSS          S+S+SSSILYP TPK  LSLCNFPL LRL+SPW 
Sbjct: 1   MTSKISVSTLPFPPSSPTSTCSRLSPSTSTSSSILYPITPKFHLSLCNFPLGLRLFSPWT 60

Query: 61  GLKHLGISSRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120
           GLKHLGIS+RGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART
Sbjct: 61  GLKHLGISTRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120

Query: 121 LGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKA 180
           LGKTLR FQPTIRELQDVSREFKTTLE+EIGLDEI S V SSYN+SKS T+SNPP V KA
Sbjct: 121 LGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIESSVNSSYNASKS-TYSNPPSVSKA 180

Query: 181 E------------ESFAVAEPRG------------------------------------- 210
           E            E  +VAEP                                       
Sbjct: 181 EEFVSNSPFLPKAEELSVAEPNDSSSASKAYSSEEYLKVTEEQLKAQDELQTNFVAQNQS 240

[Close]

BLAST of CmaCh16G001110 vs. NCBI nr
Match: gi|778679653|ref|XP_004140768.2| (PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-71
Identity = 172/278 (61.87%), Postives = 182/278 (65.47%), Query Frame = 1


Query: 1   MASKFPVPTFPFSPSS----------SSSSSSSILYPKTPKIRLSLCNFPLHLRLYSPWN 60
           M SK  V T PF PSS          S+S+SSSILYP TPK  LSLCNFPL LRL+SPW 
Sbjct: 1   MTSKISVSTLPFPPSSPTSTCSRLSPSTSTSSSILYPITPKFHLSLCNFPLGLRLFSPWT 60

Query: 61  GLKHLGISSRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120
           GLKHLGIS+RGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART
Sbjct: 61  GLKHLGISTRGRFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVART 120

Query: 121 LGKTLRTFQPTIRELQDVSREFKTTLEQEIGLDEISSPVESSYNSSKSDTFSNPPFVPKA 180
           LGKTLR FQPTIRELQDVSREFKTTLE+EIGLDEI S V SSYN+SKS T+SNPP V KA
Sbjct: 121 LGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIESSVNSSYNASKS-TYSNPPSVSKA 180

Query: 181 E------------ESFAVAEPRG------------------------------------- 210
           E            E  +VAEP                                       
Sbjct: 181 EEFVSNSPFLPKAEELSVAEPTDDSSSASKAYSSEEYLKVTEEQLKAQDELQTNFVAQNQ 240

The following BLAST results are available for this feature:

BLAST of CmaCh16G001110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TATB_PEA	2.2e-39	53.01	Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum...	[more]
TATB_ARATH	9.6e-35	52.31	Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis t...	[more]
TATB_ORYSJ	5.1e-28	50.63	Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa ...	[more]
TATB_MAIZE	1.6e-26	46.78	Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays GN=T...	[more]
TATA_THEEB	5.3e-09	48.00	Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatu...	[more]

BLAST of CmaCh16G001110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6M5_CUCSA	1.2e-71	61.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183320 PE=4 SV=1	[more]
I3S6U9_LOTJA	1.5e-42	61.18	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A058ZXI3_EUCGR	2.8e-41	56.85	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00283 PE=4 SV=1	[more]
A0A067E9T8_CITSI	1.1e-40	60.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023111mg PE=4 SV=1	[more]
A0A067EDJ1_CITSI	1.1e-40	60.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023111mg PE=4 SV=1	[more]

BLAST of CmaCh16G001110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52440.1	5.4e-36	52.31	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G28750.1	6.9e-07	39.02	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

BLAST of CmaCh16G001110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077565\|ref\|XP_008439273.1\|	1.4e-73	66.29	PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isofo...	[more]
gi\|659077563\|ref\|XP_008439272.1\|	2.3e-73	66.04	PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isofo...	[more]
gi\|778679659\|ref\|XP_011651175.1\|	5.2e-73	64.91	PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isofo...	[more]
gi\|778679656\|ref\|XP_011651174.1\|	9.8e-72	62.09	PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isofo...	[more]
gi\|778679653\|ref\|XP_004140768.2\|	1.7e-71	61.87	PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isofo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003369	TatA/B/E
IPR003998	TatB-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0008565	protein transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0009306	protein secretion

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0044802	single-organism membrane organization
biological_process	GO:0015031	protein transport
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G001110.1	CmaCh16G001110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	MttA_Hcf106	coord: 83..133 score: 4.1
IPR003998	Twin-arginine translocation protein TatB-like	PRINTS	PR01506	TATBPROTEIN	coord: 80..100 score: 2.5E-5coord: 100..119 score: 2.
None	No IPR available	PANTHER	PTHR33162	FAMILY NOT NAMED	coord: 1..165 score: 1.8
None	No IPR available	PANTHER	PTHR33162:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC	coord: 1..165 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G001110	Cucsa.107980	Cucumber (Gy14) v1	cgycmaB0248
CmaCh16G001110	Cla006162	Watermelon (97103) v1	cmawmB316
CmaCh16G001110	Csa3G183320	Cucumber (Chinese Long) v2	cmacuB329
CmaCh16G001110	MELO3C006928	Melon (DHL92) v3.5.1	cmameB296
CmaCh16G001110	ClCG05G008230	Watermelon (Charleston Gray)	cmawcgB296
CmaCh16G001110	CSPI03G17120	Wild cucumber (PI 183967)	cmacpiB335
CmaCh16G001110	CmoCh16G001220	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G001110	Lsi05G012110	Bottle gourd (USVL1VR-Ls)	cmalsiB312
CmaCh16G001110	Cp4.1LG14g06150	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G001110	MELO3C006928.2	Melon (DHL92) v3.6.1	cmamedB344
CmaCh16G001110	CsaV3_3G017320	Cucumber (Chinese Long) v3	cmacucB0383
CmaCh16G001110	Cla97C05G090310	Watermelon (97103) v2	cmawmbB346
CmaCh16G001110	Bhi01G000938	Wax gourd	cmawgoB0433
CmaCh16G001110	CsGy3G017180	Cucumber (Gy14) v2	cgybcmaB342
CmaCh16G001110	Carg15121	Silver-seed gourd	carcmaB1366

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G001110	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G001110	Cucurbita pepo (Zucchini)	cmacpeB358
CmaCh16G001110	Bottle gourd (USVL1VR-Ls)	cmalsiB320
CmaCh16G001110	Cucumber (Gy14) v2	cgybcmaB336
CmaCh16G001110	Melon (DHL92) v3.6.1	cmamedB338
CmaCh16G001110	Silver-seed gourd	carcmaB0994
CmaCh16G001110	Silver-seed gourd	carcmaB1031
CmaCh16G001110	Cucumber (Chinese Long) v3	cmacucB0398
CmaCh16G001110	Cucumber (Chinese Long) v3	cmacucB0376
CmaCh16G001110	Watermelon (97103) v2	cmawmbB344
CmaCh16G001110	Cucurbita maxima (Rimu)	cmacmaB300
CmaCh16G001110	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G001110	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh16G001110	Cucurbita maxima (Rimu)	cmacmaB359
CmaCh16G001110	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G001110	Cucurbita moschata (Rifu)	cmacmoB333