CmaCh15G013040 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G013040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Myb domain protein 7, putative
Location	Cma_Chr15 : 8222308 .. 8223341 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGATCCAATTCCCAAACACATTCAAAAACACTGAAAAAAATGAAACGAAACTCTATTTCTCGTTGCACCATTTTTTCAACTTTCTATTTTAGATCACCGATCAAACTCAGCTCGAGTTCTTCCCCTTTTTCAATTCTTTCTCTATAAAAAAGAGAGTATATTGTGTTGCTCCACAGCTCTCACTCTCTAAGAAATGGGAAGAACATCATCATGTTGTTCCAAAGGAGGCTTACACAAAGGGCCATGGACTGCTAGAGAAGATGCATTGCTTGTCAGCTATATTCAACAACATGGTGAAGGCCATTGGAGAGCCTTGCCAAAGAAAGCTGGTGAGTTCTTCAATCTTTTCTTCTCCATTCATGGAGTTATTTCTTAAAACGCTCTCTATGAATGAATTTAGGTTTGCTTCGATGTGGAAAGAGTTGTAGATTGAGATGGATGAACTATCTTCGACCCGACATTAAACGTGGCAACATAACCCCCGACGAGGACGACTTGATTATAAAACTACACACTCTACTTGGCAACAGGTGGTCTCTCATTGCCGGTAGGCTTCCTGGCCGAACCGATAATGAGATAAAAAACTACTGGAATTCCCATCTAAGCAAAAAGTTGGCAATAACCAAAGACAATGCAGGAGAGGCAAAGGAGAAGATCATCACTACAAACTCTCCAAATGGAGAGACATCAGACAGTAGAAAACCGGCCCGAGTTTCGAACGGCGATAACTCGGGCAGTGGCATGGCAAGCGGGCTACCTTTTTTGTCGGGAAATCAAGGAGGTGGCGGCGAGACCGATCGGTTGGCTGTGAATGGAGGAGGAGAGATTGAGAAGCTGAAAGGAAGGGAAGAAATGGAAGAAAGTGGGGATCTTTTTGGTGGGTGTGAAGTTTTCTATGAAGGGTCGTGGAACTGTTCTGAAAATGGAGAAAGAATTGAAGAGGTTGAAGATGATTCTTATCAACAGCTACTCAGCCTGCAGGGAGAAGATTACATTCAGTTAGAGTCCTTCATTGATTACTTCTTAATTTGA

mRNA sequence

TGAGATCCAATTCCCAAACACATTCAAAAACACTGAAAAAAATGAAACGAAACTCTATTTCTCGTTGCACCATTTTTTCAACTTTCTATTTTAGATCACCGATCAAACTCAGCTCGAGTTCTTCCCCTTTTTCAATTCTTTCTCTATAAAAAAGAGAGTATATTGTGTTGCTCCACAGCTCTCACTCTCTAAGAAATGGGAAGAACATCATCATGTTGTTCCAAAGGAGGCTTACACAAAGGGCCATGGACTGCTAGAGAAGATGCATTGCTTGTCAGCTATATTCAACAACATGGTGAAGGCCATTGGAGAGCCTTGCCAAAGAAAGCTGGTTTGCTTCGATGTGGAAAGAGTTGTAGATTGAGATGGATGAACTATCTTCGACCCGACATTAAACGTGGCAACATAACCCCCGACGAGGACGACTTGATTATAAAACTACACACTCTACTTGGCAACAGGTGGTCTCTCATTGCCGGTAGGCTTCCTGGCCGAACCGATAATGAGATAAAAAACTACTGGAATTCCCATCTAAGCAAAAAGTTGGCAATAACCAAAGACAATGCAGGAGAGGCAAAGGAGAAGATCATCACTACAAACTCTCCAAATGGAGAGACATCAGACAGTAGAAAACCGGCCCGAGTTTCGAACGGCGATAACTCGGGCAGTGGCATGGCAAGCGGGCTACCTTTTTTGTCGGGAAATCAAGGAGGTGGCGGCGAGACCGATCGGTTGGCTGTGAATGGAGGAGGAGAGATTGAGAAGCTGAAAGGAAGGGAAGAAATGGAAGAAAGTGGGGATCTTTTTGGTGGGTGTGAAGTTTTCTATGAAGGGTCGTGGAACTGTTCTGAAAATGGAGAAAGAATTGAAGAGGTTGAAGATGATTCTTATCAACAGCTACTCAGCCTGCAGGGAGAAGATTACATTCAGTTAGAGTCCTTCATTGATTACTTCTTAATTTGA

Coding sequence (CDS)

ATGGGAAGAACATCATCATGTTGTTCCAAAGGAGGCTTACACAAAGGGCCATGGACTGCTAGAGAAGATGCATTGCTTGTCAGCTATATTCAACAACATGGTGAAGGCCATTGGAGAGCCTTGCCAAAGAAAGCTGGTTTGCTTCGATGTGGAAAGAGTTGTAGATTGAGATGGATGAACTATCTTCGACCCGACATTAAACGTGGCAACATAACCCCCGACGAGGACGACTTGATTATAAAACTACACACTCTACTTGGCAACAGGTGGTCTCTCATTGCCGGTAGGCTTCCTGGCCGAACCGATAATGAGATAAAAAACTACTGGAATTCCCATCTAAGCAAAAAGTTGGCAATAACCAAAGACAATGCAGGAGAGGCAAAGGAGAAGATCATCACTACAAACTCTCCAAATGGAGAGACATCAGACAGTAGAAAACCGGCCCGAGTTTCGAACGGCGATAACTCGGGCAGTGGCATGGCAAGCGGGCTACCTTTTTTGTCGGGAAATCAAGGAGGTGGCGGCGAGACCGATCGGTTGGCTGTGAATGGAGGAGGAGAGATTGAGAAGCTGAAAGGAAGGGAAGAAATGGAAGAAAGTGGGGATCTTTTTGGTGGGTGTGAAGTTTTCTATGAAGGGTCGTGGAACTGTTCTGAAAATGGAGAAAGAATTGAAGAGGTTGAAGATGATTCTTATCAACAGCTACTCAGCCTGCAGGGAGAAGATTACATTCAGTTAGAGTCCTTCATTGATTACTTCTTAATTTGA

Protein sequence

MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAITKDNAGEAKEKIITTNSPNGETSDSRKPARVSNGDNSGSGMASGLPFLSGNQGGGGETDRLAVNGGGEIEKLKGREEMEESGDLFGGCEVFYEGSWNCSENGERIEEVEDDSYQQLLSLQGEDYIQLESFIDYFLI

Homology

[Close]

BLAST of CmaCh15G013040 vs. Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-51
Identity = 85/115 (73.91%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 3   RTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMNYL 62
           +T+ CC+K G+ +GPWT  ED +LVS+I++ GEG WR+LPK+AGLLRCGKSCRLRWMNYL
Sbjct: 13  KTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYL 72

Query: 63  RPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           RP +KRG IT DE+DLI++LH LLGNRWSLIAGR+PGRTDNEIKNYWN+HL KKL
Sbjct: 73  RPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL 127

[Close]

BLAST of CmaCh15G013040 vs. Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.4e-50
Identity = 87/117 (74.36%), Postives = 101/117 (86.32%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K  ++KG WT  ED LLV YI++HGEG WR+LP+ AGL RCGKSCRLRWMN
Sbjct: 1   MGR-SPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T +ED+LIIKLH+LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmaCh15G013040 vs. Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49
Identity = 87/117 (74.36%), Postives = 98/117 (83.76%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T DED +IIKLH+LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmaCh15G013040 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.2e-49
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV+YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T +ED+LIIKLH+LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116

[Close]

BLAST of CmaCh15G013040 vs. Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.7e-49
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRT  CC K GL +G WTA ED LL +YI +HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGRTP-CCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLR D+KRGNI+ +E+D+IIKLH  LGNRWSLIA  LPGRTDNEIKNYWNSHLS+++
Sbjct: 61  YLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 116

[Close]

BLAST of CmaCh15G013040 vs. TrEMBL
Match: A0A0A0KNQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148680 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.8e-103
Identity = 207/269 (76.95%), Postives = 225/269 (83.64%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQQ+GEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQQNGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLA-I 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA I
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAII 120

Query: 121 TKDNAGEAKEKIITTNSPNGETSDSRKPARV---SNGDNSGSGMASGLPFLSGNQG---- 180
           TKDNAGEAK++       NGETS++RK   V    N DN  +G+ S L   SGNQG    
Sbjct: 121 TKDNAGEAKKE------SNGETSNTRKATEVWSFCNDDNLSNGVGSELLLSSGNQGGEDG 180

Query: 181 ---GGGETDRLAVNGGGEI-EKLK-GREEMEESGDLFGGCEVFYEG-SWNCSENGERIEE 240
              GGGETD+L VNG  EI EK+K GREE+EESGD FGGCE  Y+G SWN S   ERI+E
Sbjct: 181 GSRGGGETDQLGVNGDEEIVEKVKGGREELEESGDFFGGCEGLYKGLSWNGS---ERIDE 240

Query: 241 VEDDSYQQLLSLQGEDYIQLESFIDYFLI 256
           +EDDSYQQLL+L+GEDYIQLESFIDYFLI
Sbjct: 241 IEDDSYQQLLNLEGEDYIQLESFIDYFLI 260

[Close]

BLAST of CmaCh15G013040 vs. TrEMBL
Match: B9RYQ9_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_1312710 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.8e-58
Identity = 107/137 (78.10%), Postives = 119/137 (86.86%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CCSK GLH+GPWTARED LL++YI+ HGEGHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGR-APCCSKVGLHRGPWTAREDKLLINYIRAHGEGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120
           YLRPDIKRGNITPDEDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+L   
Sbjct: 61  YLRPDIKRGNITPDEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL--- 120

Query: 121 KDNAGEAKEKIITTNSP 138
            D+   A +   +T  P
Sbjct: 121 -DSTSSATKMKCSTRGP 132

[Close]

BLAST of CmaCh15G013040 vs. TrEMBL
Match: W9S2F9_9ROSA (Transcription repressor OS=Morus notabilis GN=L484_023478 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.5e-57
Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CC+K GLH+GPWT +EDALL  YIQ+HGEGHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGR-APCCAKVGLHRGPWTPKEDALLTKYIQEHGEGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPDIKRGNITPDEDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWN+HLSKKL
Sbjct: 61  YLRPDIKRGNITPDEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKL 116

[Close]

BLAST of CmaCh15G013040 vs. TrEMBL
Match: A0A061DUF4_THECC (Myb domain protein 7, putative OS=Theobroma cacao GN=TCM_005112 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-57
Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CCSK GLH+GPWT RED LLV YIQ HG+GHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGR-APCCSKVGLHRGPWTPREDTLLVKYIQAHGDGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPDIKRGNITPDEDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWN+HLSK+L
Sbjct: 61  YLRPDIKRGNITPDEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRL 116

[Close]

BLAST of CmaCh15G013040 vs. TrEMBL
Match: D3XFF8_THECC (TT2 like MYB transcriptoin factor OS=Theobroma cacao GN=MYBPA PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-57
Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CCSK GLH+GPWT RED LLV YIQ HG+GHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGR-APCCSKVGLHRGPWTPREDTLLVKYIQAHGDGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPDIKRGNITPDEDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWN+HLSK+L
Sbjct: 61  YLRPDIKRGNITPDEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRL 116

[Close]

BLAST of CmaCh15G013040 vs. TAIR10
Match: AT3G13540.1 (AT3G13540.1 myb domain protein 5)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-52
Identity = 85/115 (73.91%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 3   RTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMNYL 62
           +T+ CC+K G+ +GPWT  ED +LVS+I++ GEG WR+LPK+AGLLRCGKSCRLRWMNYL
Sbjct: 13  KTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYL 72

Query: 63  RPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           RP +KRG IT DE+DLI++LH LLGNRWSLIAGR+PGRTDNEIKNYWN+HL KKL
Sbjct: 73  RPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL 127

[Close]

BLAST of CmaCh15G013040 vs. TAIR10
Match: AT1G22640.1 (AT1G22640.1 myb domain protein 3)

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-51
Identity = 87/117 (74.36%), Postives = 101/117 (86.32%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K  ++KG WT  ED LLV YI++HGEG WR+LP+ AGL RCGKSCRLRWMN
Sbjct: 1   MGR-SPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T +ED+LIIKLH+LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmaCh15G013040 vs. TAIR10
Match: AT4G09460.1 (AT4G09460.1 myb domain protein 6)

HSP 1 Score: 198.0 bits (502), Expect = 7.2e-51
Identity = 87/117 (74.36%), Postives = 98/117 (83.76%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T DED +IIKLH+LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmaCh15G013040 vs. TAIR10
Match: AT2G16720.1 (AT2G16720.1 myb domain protein 7)

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K  ++KG WT  ED  LVSYI+ HGEG WR+LP+ AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T DED+LIIKLH+LLGN+WSLIA RLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CmaCh15G013040 vs. TAIR10
Match: AT4G38620.1 (AT4G38620.1 myb domain protein 4)

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV+YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPD+KRGN T +ED+LIIKLH+LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +KL
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116

[Close]

BLAST of CmaCh15G013040 vs. NCBI nr
Match: gi|659074113|ref|XP_008437429.1| (PREDICTED: transcription factor WER-like [Cucumis melo])

HSP 1 Score: 402.1 bits (1032), Expect = 7.1e-109
Identity = 210/269 (78.07%), Postives = 229/269 (85.13%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQQ+GEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQQNGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LAIT
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAIT 120

Query: 121 KDNAGEAKEKIITTNSPNGETSDSRKPARVS---NGDNSGSGMASGLPFLSGNQ------ 180
           KDNAGE K++       NGETS++RKP  VS   N DNS +G+ S L   SGNQ      
Sbjct: 121 KDNAGETKKE------SNGETSNTRKPTEVSSFCNDDNSSNGIGSELLLSSGNQGGEDGG 180

Query: 181 --GGGGETDRLAVNGGGE-IEKLK-GREEMEESGDLFGGCEVFYEG-SWNCSENGERIEE 240
             GGGGETD+L VNG  E IEK+K GREE+EESGD F GCE  Y+G SWN SENGER++E
Sbjct: 181 SRGGGGETDQLGVNGDEEIIEKVKAGREELEESGDFFDGCEGLYKGLSWNGSENGERVDE 240

Query: 241 VEDDSYQQLLSLQGEDYIQLESFIDYFLI 256
           +EDDSYQQLL+L+GEDYIQLESFIDYFLI
Sbjct: 241 IEDDSYQQLLNLEGEDYIQLESFIDYFLI 263

[Close]

BLAST of CmaCh15G013040 vs. NCBI nr
Match: gi|449452400|ref|XP_004143947.1| (PREDICTED: myb-related protein 308-like [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 2.6e-103
Identity = 207/269 (76.95%), Postives = 225/269 (83.64%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQQ+GEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQQNGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLA-I 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA I
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAII 120

Query: 121 TKDNAGEAKEKIITTNSPNGETSDSRKPARV---SNGDNSGSGMASGLPFLSGNQG---- 180
           TKDNAGEAK++       NGETS++RK   V    N DN  +G+ S L   SGNQG    
Sbjct: 121 TKDNAGEAKKE------SNGETSNTRKATEVWSFCNDDNLSNGVGSELLLSSGNQGGEDG 180

Query: 181 ---GGGETDRLAVNGGGEI-EKLK-GREEMEESGDLFGGCEVFYEG-SWNCSENGERIEE 240
              GGGETD+L VNG  EI EK+K GREE+EESGD FGGCE  Y+G SWN S   ERI+E
Sbjct: 181 GSRGGGETDQLGVNGDEEIVEKVKGGREELEESGDFFGGCEGLYKGLSWNGS---ERIDE 240

Query: 241 VEDDSYQQLLSLQGEDYIQLESFIDYFLI 256
           +EDDSYQQLL+L+GEDYIQLESFIDYFLI
Sbjct: 241 IEDDSYQQLLNLEGEDYIQLESFIDYFLI 260

[Close]

BLAST of CmaCh15G013040 vs. NCBI nr
Match: gi|255555685|ref|XP_002518878.1| (PREDICTED: transcription repressor MYB4 [Ricinus communis])

HSP 1 Score: 232.3 bits (591), Expect = 9.7e-58
Identity = 107/137 (78.10%), Postives = 119/137 (86.86%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CCSK GLH+GPWTARED LL++YI+ HGEGHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGR-APCCSKVGLHRGPWTAREDKLLINYIRAHGEGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120
           YLRPDIKRGNITPDEDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+L   
Sbjct: 61  YLRPDIKRGNITPDEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL--- 120

Query: 121 KDNAGEAKEKIITTNSP 138
            D+   A +   +T  P
Sbjct: 121 -DSTSSATKMKCSTRGP 132

[Close]

BLAST of CmaCh15G013040 vs. NCBI nr
Match: gi|703114638|ref|XP_010100709.1| (Transcription repressor [Morus notabilis])

HSP 1 Score: 231.1 bits (588), Expect = 2.2e-57
Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CC+K GLH+GPWT +EDALL  YIQ+HGEGHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGR-APCCAKVGLHRGPWTPKEDALLTKYIQEHGEGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKL 118
           YLRPDIKRGNITPDEDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWN+HLSKKL
Sbjct: 61  YLRPDIKRGNITPDEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKL 116

[Close]

BLAST of CmaCh15G013040 vs. NCBI nr
Match: gi|743825170|ref|XP_011022448.1| (PREDICTED: myb-related protein 308-like [Populus euphratica])

HSP 1 Score: 229.9 bits (585), Expect = 4.8e-57
Identity = 107/156 (68.59%), Postives = 125/156 (80.13%), Query Frame = 1


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CCSK GLH+GPWT REDALLV+YIQ+HGEGHWR+LP KAGLLRCGKSCRLRW+N
Sbjct: 1   MGR-APCCSKVGLHRGPWTTREDALLVNYIQKHGEGHWRSLPNKAGLLRCGKSCRLRWLN 60

Query: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120
           YLRPDIKRGNITP+EDDLII+LH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+L + 
Sbjct: 61  YLRPDIKRGNITPEEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLQVR 120

Query: 121 KDNAGEAKEKIITTNSPNGETSDSRKPARVSNGDNS 157
            +  G    K       N    +++K  +  + D +
Sbjct: 121 SNKNGSRCMKESADRKRNVSNLNNKKKQKKDDEDTA 155

The following BLAST results are available for this feature:

BLAST of CmaCh15G013040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB5_ARATH	2.3e-51	73.91	Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1	[more]
MYB3_ARATH	4.4e-50	74.36	Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1	[more]
MYB6_ARATH	1.3e-49	74.36	Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1	[more]
MYB4_ARATH	2.2e-49	74.36	Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1	[more]
MYBP_MAIZE	3.7e-49	73.50	Myb-related protein P OS=Zea mays GN=P PE=2 SV=1	[more]

BLAST of CmaCh15G013040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNQ6_CUCSA	1.8e-103	76.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148680 PE=4 SV=1	[more]
B9RYQ9_RICCO	6.8e-58	78.10	R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_1312710 PE=4...	[more]
W9S2F9_9ROSA	1.5e-57	87.18	Transcription repressor OS=Morus notabilis GN=L484_023478 PE=4 SV=1	[more]
A0A061DUF4_THECC	3.4e-57	87.18	Myb domain protein 7, putative OS=Theobroma cacao GN=TCM_005112 PE=4 SV=1	[more]
D3XFF8_THECC	3.4e-57	87.18	TT2 like MYB transcriptoin factor OS=Theobroma cacao GN=MYBPA PE=2 SV=1	[more]

BLAST of CmaCh15G013040 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13540.1	1.3e-52	73.91	myb domain protein 5	[more]
AT1G22640.1	2.5e-51	74.36	myb domain protein 3	[more]
AT4G09460.1	7.2e-51	74.36	myb domain protein 6	[more]
AT2G16720.1	1.2e-50	74.36	myb domain protein 7	[more]
AT4G38620.1	1.2e-50	74.36	myb domain protein 4	[more]

BLAST of CmaCh15G013040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074113\|ref\|XP_008437429.1\|	7.1e-109	78.07	PREDICTED: transcription factor WER-like [Cucumis melo]	[more]
gi\|449452400\|ref\|XP_004143947.1\|	2.6e-103	76.95	PREDICTED: myb-related protein 308-like [Cucumis sativus]	[more]
gi\|255555685\|ref\|XP_002518878.1\|	9.7e-58	78.10	PREDICTED: transcription repressor MYB4 [Ricinus communis]	[more]
gi\|703114638\|ref\|XP_010100709.1\|	2.2e-57	87.18	Transcription repressor [Morus notabilis]	[more]
gi\|743825170\|ref\|XP_011022448.1\|	4.8e-57	68.59	PREDICTED: myb-related protein 308-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G013040.1	CmaCh15G013040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 68..113 score: 4.0E-15coord: 15..62 score: 9.7
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 67..115 score: 1.1E-15coord: 14..64 score: 5.7
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 70..117 score: 9.1E-27coord: 16..69 score: 2.6
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 12..109 score: 2.27
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 10..62 score: 14.489coord: 63..117 score: 27
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..130 score: 5.3
None	No IPR available	PANTHER	PTHR10641:SF613	SUBFAMILY NOT NAMED	coord: 1..130 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G013040	Cucsa.304110	Cucumber (Gy14) v1	cgycmaB0830
CmaCh15G013040	Cla011345	Watermelon (97103) v1	cmawmB277
CmaCh15G013040	Csa5G148680	Cucumber (Chinese Long) v2	cmacuB298
CmaCh15G013040	MELO3C005772	Melon (DHL92) v3.5.1	cmameB250
CmaCh15G013040	ClCG01G001650	Watermelon (Charleston Gray)	cmawcgB259
CmaCh15G013040	CSPI05G04430	Wild cucumber (PI 183967)	cmacpiB303
CmaCh15G013040	CmoCh15G013710	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G013040	Lsi09G001530	Bottle gourd (USVL1VR-Ls)	cmalsiB267
CmaCh15G013040	Cp4.1LG00g00600	Cucurbita pepo (Zucchini)	cmacpeB299
CmaCh15G013040	MELO3C005772.2	Melon (DHL92) v3.6.1	cmamedB284
CmaCh15G013040	CsaV3_5G001810	Cucumber (Chinese Long) v3	cmacucB0352
CmaCh15G013040	Cla97C01G001670	Watermelon (97103) v2	cmawmbB288
CmaCh15G013040	Bhi12G000100	Wax gourd	cmawgoB0374
CmaCh15G013040	Carg21298	Silver-seed gourd	carcmaB0505

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G013040	Cucurbita pepo (Zucchini)	cmacpeB331
CmaCh15G013040	Cucumber (Gy14) v2	cgybcmaB608
CmaCh15G013040	Silver-seed gourd	carcmaB0993
CmaCh15G013040	Cucurbita maxima (Rimu)	cmacmaB309
CmaCh15G013040	Cucurbita moschata (Rifu)	cmacmoB295