CmaCh15G012390 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G012390
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRING/U-box superfamily protein, putative
LocationCma_Chr15 : 7852624 .. 7855654 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTGAATAAACCTAAACCAAACACGTTTTCTACAAGATATGAAAAAAAAATTGATATCAGTTCATTCCGTTTTGATATATGAGCCGAATTTTCAGTCCTCCTGCGGCGGCGTTGAAAGTTTAGACTTTCAGGCGACTCCACGGCGGCTCCGTCTATCTCTGGCAGCGGTGGAAGGAAGACTGTTGTTATTAATTTAGATATCGTTTTTTTGGATTTACTTTTTGATTCTTCCTGACCTTTATACTCAGTGGAAAGTCGTCCTCGCGCACGAAACCATCCCAAACATTCTCTCTCTCTGCAGAGAGAGAAGCTTTCTCAGCCTTCTGTGCTTCTCTGCCATAGTCTGAACGGAAAGAAGAGCGTTTTGGAAAGGAGTCCACATCGCTGTGATTTCTTTTTCTTCCATTCGAATTGAATTCTCAATCGCGTTTTACGAATCGATTGATTTCGGCTGTTAACCGGTAAGATTCCAGTTTCTTGAATATATATCTCTTTTGCTTTCAATTTGATTCTGATGACCGCTGCTTGATCAGAAGCTCGTGTTGTATATTCGTGAGATTTTTGGCTGGTTCTGGAGCTAAGCTGGTTTTGAATTTTCCGTTTTCGTTTCTGTAGGTTTACTTTGATGCTGTATTGTTTTGAATGTTTTGTTTGATTTACTTGTTTGCAACCGCTTGGAATTTATCGACCTTTGCTCCAGAATCCGAATTTTTCGACTTCTTGTCACTTTGCTGTTGCCGTGTTATCGCTTGAGTTCTTGTTTGCATTGACTCTGGTCTATTTTGCTTTAGTTGCTTCATTGTTGTTTTAGGTTGATAGGTGAATATGTGCTTGTGGTTTCATTCAGACTGAGTTAGATTCATAATGGATGATTGAAGACGAATCTGTCTCTACTCTGGCTATACTGACTCTTCAGGAGTATTTTGTTCCTCTTTTGGTTTCATTTCGGGTCCTCTAATTACAGTCACTAATTTCAAATGATTAAGCCTTACAAGATAATAACAATCCTCTTTCTAGCTCATGAGAGCAGAATATGTTGCCAGAAAATGGCTTTTTTCTGCAGGTTCTTGCTTATTTGACTTGTTTTGCCCTTTCCTTCAATTGTGGTCTGATGAAATTCCTGCTCCTCTCCGCAAAACAAATAAATTTTGTATGAAGGGAAAATAGCATTTGTGTTTGCCCTATGTGTAGGTTCTAACTCTTGGCGAGATTTTCAACTCCAATCTTGAGTATAACCTAGGCTACAGTGTACTCTGGTCACTGTTTTCCTATCATAATTTATAATTATTTCATCATATTTGCTACTAGCTTTGTTAATCTATGATTAACTCATCGTATTATCAATCATCTTTTGCGTCAAATACACCAGTGCATTTTTCATATCTCCTAATGGAGTTTTTGATTTTACATAAACTAGACATGTCTTTCCTGAAAATTGTGCAGAGGGAACTGTGCAGTTAAATTAATTTAGGATGTTTTCTGTAACAGGGTTGGCAGTCCATAAAATTTTGAGGACGTATTGCTACTAGTGCCATGATTTGTTGGTGTGTGTTGTAGATAAGTAAGCTGAAATGGGAGGTTGCTGCTGCTGTTCCTCGAAAGAAACAGAATCAAATATTGCACCAGGCTACTATTATGTCAGTATTGAATTTTTCATTGGATGTTTATTGTCATCTTCTTATCAATCAAATTCATTATCGTAAGCAAGGACAATGCAGCCATCATCTGGTATTCATTCGTTTCTTTATTATCATTGGCAGCAATTCTAAATGCATGTAGCTGTAGGTATTCCGTTATAAACTGTAAGTTAGCGTAACTTGCATCATTTGAGGCACAAAACTGAACTGATTGCAGTGCGAGAGTGAATTCTTGAATGAAGCTTCTTTTTATAAGTAATTTTTTGCATTTTATGGTATAATTCAGCATCTTTGTGTTTTCCATAGAAGTCTTCTGCCTTAGCATGAATCAACTTAGATTGGCTGTGATTCTAGGAGAAGCTTGTGTATTACACTTGAATAAATAATGCAAGTTGATTTAAATTTAAGTTATAAACGTGACATACACTCAAAAGCTACAGTTTCTATTATTTGATCTCGCAAGCGCTTAACTGCTAACTAACATGATGGGTAAGGAATTTTCTTTCCATTGTCAATTTCCTTGCTCAAAATCTCAATTTACTTGGATCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGAGGAGCATGTTCCCCTGTCATCTCCACTTAATGCTCCCCCAGCATTTCCAATGGGGCTTTTAGTCGATACAAACCTGGATACATCAATCCCAGACACGTATAGATCGCCTCCATTGCCTATGCCATATAATGTTGTTTTATCACATCCACATACTCCACCTGTGGCTCAAGAAATCTGCAGTAATAAGAATGATGCTGCAGCTCAGACTACCAATTCCGATACAATTCAAGAAACAACATGCATAAACACTCGGGAAACTTCAGCCAAATGTGAAGGCATCGACGATGAGTCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATCGAACTTTCAAAGGGTGTGAAATCTGTGGTCTTACCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGGTGAAGTTTTGCCAAAACTTTGTTTAGCTACCTATACCAACCCACCAATCCGTGGAATTTTTTTAACCTTATATGTCTATTGCCAACGTTCGACATTTTAGTTGCTTGAACTAACAAGTCACAACATTGTTGCTTTCTCGACAACTGCACAGTACCATTTCATTTTAATTACTTGACCTAACAAGCCACCTAGTCATCATTTTCTATTGTCTTATGCAGAATATGACGGAGAGAATCCAAAACTTACAACAAAATGCGAGCATCATTTTCATCTTGCATGCATTTTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTTTCAGTTTATGCTTTATCATCCGTCATCACCTCATACTCATTAGCGTGTAA

mRNA sequence

AACTGAATAAACCTAAACCAAACACGTTTTCTACAAGATATGAAAAAAAAATTGATATCAGTTCATTCCGTTTTGATATATGAGCCGAATTTTCAGTCCTCCTGCGGCGGCGTTGAAAGTTTAGACTTTCAGGCGACTCCACGGCGGCTCCGTCTATCTCTGGCAGCGGTGGAAGGAAGACTGTTGTTATTAATTTAGATATCGTTTTTTTGGATTTACTTTTTGATTCTTCCTGACCTTTATACTCAGTGGAAAGTCGTCCTCGCGCACGAAACCATCCCAAACATTCTCTCTCTCTGCAGAGAGAGAAGCTTTCTCAGCCTTCTGTGCTTCTCTGCCATAGTCTGAACGGAAAGAAGAGCGTTTTGGAAAGGAGTCCACATCGCTGTGATTTCTTTTTCTTCCATTCGAATTGAATTCTCAATCGCGTTTTACGAATCGATTGATTTCGGCTGTTAACCGGGTTGGCAGTCCATAAAATTTTGAGGACGTATTGCTACTAGTGCCATGATTTGTTGGTGTGTGTTGTAGATAAGTAAGCTGAAATGGGAGGTTGCTGCTGCTGTTCCTCGAAAGAAACAGAATCAAATATTGCACCAGGCTACTATTATTACCCAAGAGCATCGGAGGAGCATGTTCCCCTGTCATCTCCACTTAATGCTCCCCCAGCATTTCCAATGGGGCTTTTAGTCGATACAAACCTGGATACATCAATCCCAGACACGTATAGATCGCCTCCATTGCCTATGCCATATAATGTTGTTTTATCACATCCACATACTCCACCTGTGGCTCAAGAAATCTGCAGTAATAAGAATGATGCTGCAGCTCAGACTACCAATTCCGATACAATTCAAGAAACAACATGCATAAACACTCGGGAAACTTCAGCCAAATGTGAAGGCATCGACGATGAGTCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATCGAACTTTCAAAGGGTGTGAAATCTGTGGTCTTACCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGACGGAGAGAATCCAAAACTTACAACAAAATGCGAGCATCATTTTCATCTTGCATGCATTTTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTTTCAGTTTATGCTTTATCATCCGTCATCACCTCATACTCATTAGCGTGTAA

Coding sequence (CDS)

ATGGGAGGTTGCTGCTGCTGTTCCTCGAAAGAAACAGAATCAAATATTGCACCAGGCTACTATTATTACCCAAGAGCATCGGAGGAGCATGTTCCCCTGTCATCTCCACTTAATGCTCCCCCAGCATTTCCAATGGGGCTTTTAGTCGATACAAACCTGGATACATCAATCCCAGACACGTATAGATCGCCTCCATTGCCTATGCCATATAATGTTGTTTTATCACATCCACATACTCCACCTGTGGCTCAAGAAATCTGCAGTAATAAGAATGATGCTGCAGCTCAGACTACCAATTCCGATACAATTCAAGAAACAACATGCATAAACACTCGGGAAACTTCAGCCAAATGTGAAGGCATCGACGATGAGTCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATCGAACTTTCAAAGGGTGTGAAATCTGTGGTCTTACCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGACGGAGAGAATCCAAAACTTACAACAAAATGCGAGCATCATTTTCATCTTGCATGCATTTTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTTTCAGTTTATGCTTTATCATCCGTCATCACCTCATACTCATTAGCGTGTAA

Protein sequence

MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQVCFSLCFIIRHHLILISV
Homology
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BLAST of CmaCh15G012390 vs. Swiss-Prot
Match: RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 9.7e-38
Identity = 90/204 (44.12%), Postives = 124/204 (60.78%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCC  SS+++     P YYY P + EE VP  +      AF  GLLVD  L+TSIPDT
Sbjct: 1   MGGCCS-SSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDT 60

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           + +P  P+PY+++L  P                  Q T+S++I+     ++ ET A CE 
Sbjct: 61  FCAPA-PLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCED 120

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           +  ESDCK      + + ++S+    +G+K  +L  EEED CPIC E+YD ENP+LTTKC
Sbjct: 121 LG-ESDCKTLASSVILSPRKSDFSKHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EH FHL+C+LEW+ERSD CP+CD+
Sbjct: 181 EHEFHLSCLLEWIERSDRCPICDK 181

[Close]
BLAST of CmaCh15G012390 vs. Swiss-Prot
Match: RING3_ARATH (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 1 

Query: 54  DTSIPDTYRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINT-- 113
           D  + + +RS P P+PY+    +  +    +E  S+ +    +   SD+  ++       
Sbjct: 70  DNFLSEAFRSTPRPLPYDADPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGG 129

Query: 114 -RETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYD 173
            +  + K    D +S  +  +   +  L+     +    +++ +  E+EDVCP CLEEY 
Sbjct: 130 CKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYT 189

Query: 174 GENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 206
            ENPK+ TKC HHFHL+CI EWMERS+ CPVC +V
Sbjct: 190 SENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 224

[Close]
BLAST of CmaCh15G012390 vs. Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.3e-09
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 1 

Query: 159 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 206
           +D C ICLE +  ++P   T C+H +HL CI+EW +RS  CP+C Q+
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQL 89

[Close]
BLAST of CmaCh15G012390 vs. Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-09
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 1 

Query: 159 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 205
           +D C ICLE +   +P   T C+H +HL CILEW +RS  CP+C Q
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQ 75

[Close]
BLAST of CmaCh15G012390 vs. Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 19/53 (35.85%), Postives = 33/53 (62.26%), Query Frame = 1 

Query: 150 KSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203
           ++V+   + E  CP+CL E++ E   +   C H FH +CIL W+ +++ CP+C
Sbjct: 64  RTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLC 116

[Close]
BLAST of CmaCh15G012390 vs. TrEMBL
Match: A0A0A0KQV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152960 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 9.9e-98
Identity = 179/204 (87.75%), Postives = 185/204 (90.69%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAPGYYYYPRASEEHVPLS PL  P  F  GLLVDTNLDTSIPDT
Sbjct: 122 MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLS-PLRTPREFSTGLLVDTNLDTSIPDT 181

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           YRSPPLPMPY+VVL+ P TPPV QEI   KN+AAAQTTNS+TIQET CINTRETSAKCEG
Sbjct: 182 YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 241

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           +D ESDCKKHTDFEVD LKESE ELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTKC
Sbjct: 242 VD-ESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKC 301

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EHHFHLACILEWMERSDICPVCDQ
Sbjct: 302 EHHFHLACILEWMERSDICPVCDQ 323

[Close]
BLAST of CmaCh15G012390 vs. TrEMBL
Match: M5WND5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011402mg PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.3e-77
Identity = 143/205 (69.76%), Postives = 160/205 (78.05%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TE   AP YYYYPR+S+EHVPLSS      A   GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTEIGAAPTYYYYPRSSDEHVPLSSRQGVTSALSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYNV-VLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           YR PP P+PY+V V+ HPHTPP AQEIC NK++ A  TTNSD++ E    N +E S KCE
Sbjct: 61  YRPPPTPIPYDVAVVGHPHTPPAAQEICGNKSEGAVLTTNSDSVHEAVGGNAQEASPKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            + D SDCK  TDFE+D  K+SE+ELSK V+SV L  EEEDVCP CLEEYD +NPK+TTK
Sbjct: 121 DLKD-SDCKAQTDFELDAEKKSEVELSKSVESVALVPEEEDVCPTCLEEYDAQNPKITTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQ 205
           CEHHFHLACILEWMERSD CPVCDQ
Sbjct: 181 CEHHFHLACILEWMERSDTCPVCDQ 204

[Close]
BLAST of CmaCh15G012390 vs. TrEMBL
Match: A0A067JZH3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20566 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.4e-74
Identity = 142/205 (69.27%), Postives = 160/205 (78.05%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TE N AP YYYYPRASEEHVPLSS L A  +   GLLVDTNLDTS+PD 
Sbjct: 1   MGGCCCCSSKGTELNSAPAYYYYPRASEEHVPLSSRLGAASSLSTGLLVDTNLDTSVPDA 60

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           YR PP PMP++V    P TP  AQE  SNK+DAA QT NS ++QETT INT E SAKCE 
Sbjct: 61  YRPPPPPMPFDVAPGRPQTPVGAQETFSNKDDAAEQTANSGSVQETTGINTLEISAKCED 120

Query: 121 IDDESDCK-KHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
           I  ESDCK ++ + E D+ KE ++ELSK V+ +V   EEEDVCPICLEEYD ENPK+TTK
Sbjct: 121 I-KESDCKAQNNNIEFDSAKELDVELSKSVEPIVSATEEEDVCPICLEEYDAENPKITTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQ 205
           CEHHFHLACILEWMERS+ CPVCD+
Sbjct: 181 CEHHFHLACILEWMERSETCPVCDK 204

[Close]
BLAST of CmaCh15G012390 vs. TrEMBL
Match: B9RCE8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1687500 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 133/204 (65.20%), Postives = 153/204 (75.00%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK  E N AP YYYYPRASEEHVPLSS   +      GLLVDTNLDTS+PD 
Sbjct: 1   MGGCCCCSSKGAEINSAPAYYYYPRASEEHVPLSSRHGSVATLSTGLLVDTNLDTSVPDA 60

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           YR PP P+P+ + +  P TP  AQE  S+K+D   QTTNS ++QETT  NTRETS KCE 
Sbjct: 61  YRPPPPPIPFEMAIGCPQTPQGAQETSSDKDDGTVQTTNSGSVQETTYTNTRETSIKCED 120

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           +  E DCK  T+ E+D+ KE E+E SK V+ +V   EEEDVCP CLEEYD ENPK+TTKC
Sbjct: 121 V-KEPDCKAQTNLELDSAKELEVEFSKSVELLVSATEEEDVCPTCLEEYDAENPKITTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EHHFHL+CILEWMERSD CPVCD+
Sbjct: 181 EHHFHLSCILEWMERSDTCPVCDK 203

[Close]
BLAST of CmaCh15G012390 vs. TrEMBL
Match: V7CPE3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G291400g PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.1e-67
Identity = 134/205 (65.37%), Postives = 152/205 (74.15%), Query Frame = 1 

Query: 1   MGGCCCC-SSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPD 60
           MGGCCCC SSKET  +  P YYYYPRASEEHVPLSS   A  AF   LLVDTNLDTS PD
Sbjct: 1   MGGCCCCCSSKETVLSAPPAYYYYPRASEEHVPLSSHQGAASAFSGRLLVDTNLDTSSPD 60

Query: 61  TYRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           TYR PP P+P+NV      TPPV QEI S+KN+A+  +TNS TIQE    +   T  K E
Sbjct: 61  TYRPPPAPIPFNVTFGTTQTPPVTQEIRSDKNNASFHSTNSSTIQEQVSGDNHGTPVKME 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            +  ES+CK  TD E+D+ K+SEIEL+K  K VVL +EEED CPICLEEYD ENPKL T+
Sbjct: 121 EL-KESECKVQTDLELDSAKDSEIELAKSGKPVVL-VEEEDTCPICLEEYDAENPKLATQ 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQ 205
           C+HHFHLACILEWMERS+ CPVCDQ
Sbjct: 181 CDHHFHLACILEWMERSETCPVCDQ 203

[Close]
BLAST of CmaCh15G012390 vs. TAIR10
Match: AT5G41350.1 (AT5G41350.1 RING/U-box superfamily protein)

HSP 1 Score: 191.0 bits (484), Expect = 7.6e-49
Identity = 103/208 (49.52%), Postives = 137/208 (65.87%), Query Frame = 1 

Query: 1   MGGCCCCSS-KETESNIAPGYYYYPRASEEHVPLSSPLN-APPAFPMG-LLVDTNLDTSI 60
           MGGCCCCSS +  + +  P YYYYPRA+EE VPLSS  N    A   G ++VDTNL+TS 
Sbjct: 1   MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSS 60

Query: 61  PDTYRSPPLPMPYNVVLSHPHTPPVAQE-ICSNKNDAAAQTTNSDTIQETTCINTRETSA 120
           PD Y  PPLP P++V +  P TP   +E  C +  + +  + N+++ QET    T     
Sbjct: 61  PDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESAQETVDGITLGVPT 120

Query: 121 KCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKL 180
            C     E+D K  T+ ++++ +E + +LS   K+V +PIEEE+ CPICLEEYD ENPKL
Sbjct: 121 TCS--HKETDSKIQTEIDLESTEEIDPKLS---KAVFIPIEEEEDCPICLEEYDIENPKL 180

Query: 181 TTKCEHHFHLACILEWMERSDICPVCDQ 205
             KC+HHFHLACILEWMERS+ CPVC++
Sbjct: 181 VAKCDHHFHLACILEWMERSETCPVCNK 203

[Close]
BLAST of CmaCh15G012390 vs. TAIR10
Match: AT4G00335.1 (AT4G00335.1 RING-H2 finger B1A)

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-39
Identity = 90/204 (44.12%), Postives = 124/204 (60.78%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCC  SS+++     P YYY P + EE VP  +      AF  GLLVD  L+TSIPDT
Sbjct: 1   MGGCCS-SSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDT 60

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           + +P  P+PY+++L  P                  Q T+S++I+     ++ ET A CE 
Sbjct: 61  FCAPA-PLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCED 120

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           +  ESDCK      + + ++S+    +G+K  +L  EEED CPIC E+YD ENP+LTTKC
Sbjct: 121 LG-ESDCKTLASSVILSPRKSDFSKHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EH FHL+C+LEW+ERSD CP+CD+
Sbjct: 181 EHEFHLSCLLEWIERSDRCPICDK 181

[Close]
BLAST of CmaCh15G012390 vs. TAIR10
Match: AT5G38895.3 (AT5G38895.3 RING/U-box superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 7.4e-20
Identity = 59/159 (37.11%), Postives = 82/159 (51.57%), Query Frame = 1 

Query: 51  TNLDTSIPDTYRSPPLPMPYNVVLSHPHTPPVAQEIC-SNKNDAAAQTTNSDTIQETTCI 110
           T LD S+   Y SPP P+PY+        P   + +  S+ +   ++    DT   +  +
Sbjct: 172 TALDDSLSSVYHSPPTPLPYDA------DPRYFRFVKGSSHSGEESEPLRGDTEMSSEAL 231

Query: 111 NTRETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSK---GVKSVVLPIEEEDVCPICL 170
              +  AK    D E   K     EV T   S    SK   G++      ++ED+CP CL
Sbjct: 232 G--DGGAKWSKSDSEDGSK-----EVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCL 291

Query: 171 EEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 206
           ++Y  ENPK+ TKC HHFHL+CI EWMERS+ CPVC +V
Sbjct: 292 DDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKV 317

[Close]
BLAST of CmaCh15G012390 vs. TAIR10
Match: AT3G02290.1 (AT3G02290.1 RING/U-box superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 8.2e-19
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 1 

Query: 54  DTSIPDTYRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINT-- 113
           D  + + +RS P P+PY+    +  +    +E  S+ +    +   SD+  ++       
Sbjct: 70  DNFLSEAFRSTPRPLPYDADPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGG 129

Query: 114 -RETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYD 173
            +  + K    D +S  +  +   +  L+     +    +++ +  E+EDVCP CLEEY 
Sbjct: 130 CKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYT 189

Query: 174 GENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 206
            ENPK+ TKC HHFHL+CI EWMERS+ CPVC +V
Sbjct: 190 SENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 224

[Close]
BLAST of CmaCh15G012390 vs. TAIR10
Match: AT5G15790.1 (AT5G15790.1 RING/U-box superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 1 

Query: 45  MGLLVDTNLDTSIPDTYRSPPLPMPYNV----VLSHPHTPPVAQEICSNKNDAAAQTTNS 104
           + +   T+ D  + +T+ S P P+PY+       S   +    ++  S+ +   A+   S
Sbjct: 62  VSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLRS 121

Query: 105 DTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEED 164
           D   ++   +   +    + I    D K+        + +S   +S   + + +  ++ED
Sbjct: 122 DADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRT-MSTSNEGLYITSDDED 181

Query: 165 VCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 206
           VCP CLEEY  ENPK+ TKC HHFHL+CI EWMERS+ CPVC +V
Sbjct: 182 VCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 225

[Close]
BLAST of CmaCh15G012390 vs. NCBI nr
Match: gi|659073890|ref|XP_008437308.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 1.8e-100
Identity = 182/204 (89.22%), Postives = 189/204 (92.65%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAPGYYYYPRASEEHVPLSSPL  P AF  GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           YRSPPLPMPY+VVL+ P TPPVAQEI S KN+AAAQT NS+TIQET CINTRE SAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTSPLTPPVAQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEG 120

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           + DESDCKKHTDFEV+TLKESEIELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTKC
Sbjct: 121 V-DESDCKKHTDFEVNTLKESEIELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EHHFHLACILEWMERSDICPVCDQ
Sbjct: 181 EHHFHLACILEWMERSDICPVCDQ 203

[Close]
BLAST of CmaCh15G012390 vs. NCBI nr
Match: gi|449452294|ref|XP_004143894.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-97
Identity = 179/204 (87.75%), Postives = 185/204 (90.69%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAPGYYYYPRASEEHVPLS PL  P  F  GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLS-PLRTPREFSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           YRSPPLPMPY+VVL+ P TPPV QEI   KN+AAAQTTNS+TIQET CINTRETSAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           +D ESDCKKHTDFEVD LKESE ELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTKC
Sbjct: 121 VD-ESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EHHFHLACILEWMERSDICPVCDQ
Sbjct: 181 EHHFHLACILEWMERSDICPVCDQ 202

[Close]
BLAST of CmaCh15G012390 vs. NCBI nr
Match: gi|700194904|gb|KGN50081.1| (hypothetical protein Csa_5G152960 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-97
Identity = 179/204 (87.75%), Postives = 185/204 (90.69%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAPGYYYYPRASEEHVPLS PL  P  F  GLLVDTNLDTSIPDT
Sbjct: 122 MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLS-PLRTPREFSTGLLVDTNLDTSIPDT 181

Query: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120
           YRSPPLPMPY+VVL+ P TPPV QEI   KN+AAAQTTNS+TIQET CINTRETSAKCEG
Sbjct: 182 YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 241

Query: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           +D ESDCKKHTDFEVD LKESE ELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTKC
Sbjct: 242 VD-ESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKC 301

Query: 181 EHHFHLACILEWMERSDICPVCDQ 205
           EHHFHLACILEWMERSDICPVCDQ
Sbjct: 302 EHHFHLACILEWMERSDICPVCDQ 323

[Close]
BLAST of CmaCh15G012390 vs. NCBI nr
Match: gi|645267133|ref|XP_008238929.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Prunus mume])

HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77
Identity = 143/205 (69.76%), Postives = 161/205 (78.54%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TE + AP YYYYPR+S+EHVPLSS      A   GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTEISAAPTYYYYPRSSDEHVPLSSRQGVTSALSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYNVVLS-HPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           YR PP P+PY+V +  HPHTPP AQEIC NK++ A  TTNSD++ E    N +E SAKCE
Sbjct: 61  YRPPPTPIPYDVAVEGHPHTPPAAQEICGNKSEGAVLTTNSDSVHEAVGENAQEASAKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            + D SDCK  TDFE+D  K+SE+ELSK V+SV L  EEEDVCP CLEEYD +NPK+TTK
Sbjct: 121 DLKD-SDCKAQTDFELDAEKKSEVELSKSVESVALVPEEEDVCPTCLEEYDAQNPKITTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQ 205
           CEHHFHLACILEWMERSD CPVCDQ
Sbjct: 181 CEHHFHLACILEWMERSDTCPVCDQ 204

[Close]
BLAST of CmaCh15G012390 vs. NCBI nr
Match: gi|595848766|ref|XP_007209594.1| (hypothetical protein PRUPE_ppa011402mg [Prunus persica])

HSP 1 Score: 296.2 bits (757), Expect = 4.8e-77
Identity = 143/205 (69.76%), Postives = 160/205 (78.05%), Query Frame = 1 

Query: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TE   AP YYYYPR+S+EHVPLSS      A   GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTEIGAAPTYYYYPRSSDEHVPLSSRQGVTSALSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYNV-VLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120
           YR PP P+PY+V V+ HPHTPP AQEIC NK++ A  TTNSD++ E    N +E S KCE
Sbjct: 61  YRPPPTPIPYDVAVVGHPHTPPAAQEICGNKSEGAVLTTNSDSVHEAVGGNAQEASPKCE 120

Query: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180
            + D SDCK  TDFE+D  K+SE+ELSK V+SV L  EEEDVCP CLEEYD +NPK+TTK
Sbjct: 121 DLKD-SDCKAQTDFELDAEKKSEVELSKSVESVALVPEEEDVCPTCLEEYDAQNPKITTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQ 205
           CEHHFHLACILEWMERSD CPVCDQ
Sbjct: 181 CEHHFHLACILEWMERSDTCPVCDQ 204

The following BLAST results are available for this feature:
BLAST of CmaCh15G012390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHB1A_ARATH9.7e-3844.12Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2... [more]
RING3_ARATH1.5e-1732.90E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 ... [more]
RHF1A_ARATH4.3e-0946.81E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1[more]
RHF2A_ARATH5.6e-0950.00E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1[more]
RN181_HUMAN2.0e-0635.85E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1[more]
BLAST of CmaCh15G012390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQV6_CUCSA9.9e-9887.75Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152960 PE=4 SV=1[more]
M5WND5_PRUPE3.3e-7769.76Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011402mg PE=4 SV=1[more]
A0A067JZH3_JATCU3.4e-7469.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20566 PE=4 SV=1[more]
B9RCE8_RICCO1.2e-7165.20Protein binding protein, putative OS=Ricinus communis GN=RCOM_1687500 PE=4 SV=1[more]
V7CPE3_PHAVU9.1e-6765.37Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G291400g PE=4 SV=1[more]
BLAST of CmaCh15G012390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G41350.17.6e-4949.52 RING/U-box superfamily protein[more]
AT4G00335.15.5e-3944.12 RING-H2 finger B1A[more]
AT5G38895.37.4e-2037.11 RING/U-box superfamily protein[more]
AT3G02290.18.2e-1932.90 RING/U-box superfamily protein[more]
AT5G15790.11.1e-1832.12 RING/U-box superfamily protein[more]
BLAST of CmaCh15G012390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073890|ref|XP_008437308.1|1.8e-10089.22PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis melo][more]
gi|449452294|ref|XP_004143894.1|1.4e-9787.75PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus][more]
gi|700194904|gb|KGN50081.1|1.4e-9787.75hypothetical protein Csa_5G152960 [Cucumis sativus][more]
gi|645267133|ref|XP_008238929.1|2.1e-7769.76PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Prunus mume][more]
gi|595848766|ref|XP_007209594.1|4.8e-7769.76hypothetical protein PRUPE_ppa011402mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G012390.1CmaCh15G012390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 161..202
score: 1.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 162..202
score: 6.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 162..203
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 157..203
score: 1.5
NoneNo IPR availablePANTHERPTHR22937RING FINGER CONTAINING PROTEINcoord: 31..81
score: 7.9E-75coord: 100..204
score: 7.9
NoneNo IPR availablePANTHERPTHR22937:SF49SUBFAMILY NOT NAMEDcoord: 100..204
score: 7.9E-75coord: 31..81
score: 7.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 156..208
score: 1.56

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh15G012390Cucsa.303310Cucumber (Gy14) v1cgycmaB0830
CmaCh15G012390Cla011431Watermelon (97103) v1cmawmB277
CmaCh15G012390Cla021226Watermelon (97103) v1cmawmB271
CmaCh15G012390Csa3G121780Cucumber (Chinese Long) v2cmacuB288
CmaCh15G012390Csa5G152960Cucumber (Chinese Long) v2cmacuB298
CmaCh15G012390MELO3C005692Melon (DHL92) v3.5.1cmameB250
CmaCh15G012390MELO3C006098Melon (DHL92) v3.5.1cmameB281
CmaCh15G012390ClCG05G001420Watermelon (Charleston Gray)cmawcgB267
CmaCh15G012390ClCG01G002540Watermelon (Charleston Gray)cmawcgB259
CmaCh15G012390CSPI03G08670Wild cucumber (PI 183967)cmacpiB293
CmaCh15G012390CSPI05G05250Wild cucumber (PI 183967)cmacpiB303
CmaCh15G012390CmoCh02G014720Cucurbita moschata (Rifu)cmacmoB298
CmaCh15G012390CmoCh15G013030Cucurbita moschata (Rifu)cmacmoB287
CmaCh15G012390Lsi09G002400Bottle gourd (USVL1VR-Ls)cmalsiB267
CmaCh15G012390Lsi05G020500Bottle gourd (USVL1VR-Ls)cmalsiB287
CmaCh15G012390Cp4.1LG13g01370Cucurbita pepo (Zucchini)cmacpeB305
CmaCh15G012390Cp4.1LG05g03230Cucurbita pepo (Zucchini)cmacpeB329
CmaCh15G012390MELO3C005692.2Melon (DHL92) v3.6.1cmamedB284
CmaCh15G012390CsaV3_5G002650Cucumber (Chinese Long) v3cmacucB0352
CmaCh15G012390Cla97C05G081780Watermelon (97103) v2cmawmbB309
CmaCh15G012390Cla97C01G002600Watermelon (97103) v2cmawmbB288
CmaCh15G012390Bhi12G000267Wax gourdcmawgoB0365
CmaCh15G012390CsGy5G002520Cucumber (Gy14) v2cgybcmaB608
CmaCh15G012390Carg16626Silver-seed gourdcarcmaB1281
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh15G012390CmaCh02G014380Cucurbita maxima (Rimu)cmacmaB312
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh15G012390Cucumber (Gy14) v1cgycmaB0370
CmaCh15G012390Wild cucumber (PI 183967)cmacpiB319
CmaCh15G012390Cucumber (Chinese Long) v2cmacuB313
CmaCh15G012390Bottle gourd (USVL1VR-Ls)cmalsiB266
CmaCh15G012390Melon (DHL92) v3.6.1cmamedB303
CmaCh15G012390Silver-seed gourdcarcmaB1261
CmaCh15G012390Watermelon (97103) v2cmawmbB314