CmaCh15G006010 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G006010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Vacuolar iron transporter-like protein 4
Location	Cma_Chr15 : 2847297 .. 2847935 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCCAACAAGTTGAATCTAACCAATTTGGAGCAACAATCCGGGTCCGAGATCCAAACCAATGAATTCGACTACTCAAAACGCGCACAATGGCTACGAGCCGCCGTGCTTGGTGCCAACGATGGGCTTGTCTCGACCGCGTCGCTTATGATGGGAATCGGAGCTGTGAAACAAGACATCAAAGCCATGATCCTCACCGGGTTTGCCGGGTTGGTGGCCGGTGCGTGTAGCATGGCAATCGGCGAGTTTGTGTCGGTTTACTCACAATTGGACATTGAAGTAGCTCAAATAAAAAGAGAGAAACTACAAAGAAGAAATTTAGAAGGACAAGAGCAAGAGAGCAAAGATGATGAGAAACTACCAAATCCACTCCAAGCCGCGGCAGCCTCCGCCTTGGCTTTCTCCTTAGGAGCAATGGTACCACTATTGGCAGCTTCGTTTATAAGAGAGTACAAGGTAAGGCTTGTGGTGGTTGTGGCAGCGGTGACGTTAGCGCTCGGCGTGTTCGGGTGGTTGGGTGCCATCCTTGGAAAAGCATCCCCAATCAAATCCACCATAAGGGTGTTGGTCGGAGGTTGGTTAGCCATGGCTATAACCTTTGGCTTGACTAAGCTAATCGGAGTAAGTGGACTCTAG

mRNA sequence

ATGGAGCCCAACAAGTTGAATCTAACCAATTTGGAGCAACAATCCGGGTCCGAGATCCAAACCAATGAATTCGACTACTCAAAACGCGCACAATGGCTACGAGCCGCCGTGCTTGGTGCCAACGATGGGCTTGTCTCGACCGCGTCGCTTATGATGGGAATCGGAGCTGTGAAACAAGACATCAAAGCCATGATCCTCACCGGGTTTGCCGGGTTGGTGGCCGGTGCGTGTAGCATGGCAATCGGCGAGTTTGTGTCGGTTTACTCACAATTGGACATTGAAGTAGCTCAAATAAAAAGAGAGAAACTACAAAGAAGAAATTTAGAAGGACAAGAGCAAGAGAGCAAAGATGATGAGAAACTACCAAATCCACTCCAAGCCGCGGCAGCCTCCGCCTTGGCTTTCTCCTTAGGAGCAATGGTACCACTATTGGCAGCTTCGTTTATAAGAGAGTACAAGGTAAGGCTTGTGGTGGTTGTGGCAGCGGTGACGTTAGCGCTCGGCGTGTTCGGGTGGTTGGGTGCCATCCTTGGAAAAGCATCCCCAATCAAATCCACCATAAGGGTGTTGGTCGGAGGTTGGTTAGCCATGGCTATAACCTTTGGCTTGACTAAGCTAATCGGAGTAAGTGGACTCTAG

Coding sequence (CDS)

ATGGAGCCCAACAAGTTGAATCTAACCAATTTGGAGCAACAATCCGGGTCCGAGATCCAAACCAATGAATTCGACTACTCAAAACGCGCACAATGGCTACGAGCCGCCGTGCTTGGTGCCAACGATGGGCTTGTCTCGACCGCGTCGCTTATGATGGGAATCGGAGCTGTGAAACAAGACATCAAAGCCATGATCCTCACCGGGTTTGCCGGGTTGGTGGCCGGTGCGTGTAGCATGGCAATCGGCGAGTTTGTGTCGGTTTACTCACAATTGGACATTGAAGTAGCTCAAATAAAAAGAGAGAAACTACAAAGAAGAAATTTAGAAGGACAAGAGCAAGAGAGCAAAGATGATGAGAAACTACCAAATCCACTCCAAGCCGCGGCAGCCTCCGCCTTGGCTTTCTCCTTAGGAGCAATGGTACCACTATTGGCAGCTTCGTTTATAAGAGAGTACAAGGTAAGGCTTGTGGTGGTTGTGGCAGCGGTGACGTTAGCGCTCGGCGTGTTCGGGTGGTTGGGTGCCATCCTTGGAAAAGCATCCCCAATCAAATCCACCATAAGGGTGTTGGTCGGAGGTTGGTTAGCCATGGCTATAACCTTTGGCTTGACTAAGCTAATCGGAGTAAGTGGACTCTAG

Protein sequence

MEPNKLNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTIRVLVGGWLAMAITFGLTKLIGVSGL

Homology

[Close]

BLAST of CmaCh15G006010 vs. Swiss-Prot
Match: VITH4_ARATH (Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana GN=At3g43660 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.8e-69
Identity = 151/212 (71.23%), Postives = 173/212 (81.60%), Query Frame = 1


Query: 1   MEPNKLNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQD 60
           ME N  NL NL+ +   E     FDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQD
Sbjct: 1   MESNNNNL-NLDMEKDQE---TTFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQD 60

Query: 61  IKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEK 120
           ++ M+LTGFAGLVAGACSMAIGEF+SVYSQ DIEVAQ+KRE        G E +    EK
Sbjct: 61  VRIMLLTGFAGLVAGACSMAIGEFISVYSQYDIEVAQMKRE-------SGGETKK---EK 120

Query: 121 LPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKA 180
           LP+P QAA ASALAF+LGA+VPLLAA+F++EYKVR+ V+VAAVTLAL +FGWLGA+LGKA
Sbjct: 121 LPSPTQAAIASALAFTLGAIVPLLAAAFVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKA 180

Query: 181 SPIKSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
             +KS +RVL+GGWLAMAITFG TKL+G  GL
Sbjct: 181 PVVKSLVRVLIGGWLAMAITFGFTKLVGSHGL 198

[Close]

BLAST of CmaCh15G006010 vs. Swiss-Prot
Match: VITH3_ARATH (Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana GN=At3g43630 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68
Identity = 150/202 (74.26%), Postives = 168/202 (83.17%), Query Frame = 1


Query: 7   NLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMIL 66
           N  NL+ +   E     FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQ++K MIL
Sbjct: 5   NTLNLDMEKDQE---KAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQNVKIMIL 64

Query: 67  TGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQ 126
           TGFAGLVAGACSMAIGEFVSVYSQ DIEVAQ+KRE        G E E    EKLP+P Q
Sbjct: 65  TGFAGLVAGACSMAIGEFVSVYSQYDIEVAQMKRE-------TGGEIEK---EKLPSPTQ 124

Query: 127 AAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKST 186
           AAAASALAFSLGAMVPLLAA+F++EYKVR+  +VAAVTLAL +FGWLGA+LGKA  +KS+
Sbjct: 125 AAAASALAFSLGAMVPLLAAAFVKEYKVRIGAIVAAVTLALVMFGWLGAVLGKAPVVKSS 184

Query: 187 IRVLVGGWLAMAITFGLTKLIG 209
           +RVLVGGWLAMAIT+G TKLIG
Sbjct: 185 LRVLVGGWLAMAITYGFTKLIG 193

[Close]

BLAST of CmaCh15G006010 vs. Swiss-Prot
Match: VITH1_ARATH (Vacuolar iron transporter homolog 1 OS=Arabidopsis thaliana GN=At1g21140 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-67
Identity = 147/209 (70.33%), Postives = 170/209 (81.34%), Query Frame = 1


Query: 4   NKLNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKA 63
           N  N  NL+ +   E     FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQD+K 
Sbjct: 5   NVSNSLNLDMEMDQE---KAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDVKV 64

Query: 64  MILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPN 123
           MIL+GFAGLVAGACSMAIGEFVSVYSQ DIEVAQ+KRE        GQ ++    EKLP+
Sbjct: 65  MILSGFAGLVAGACSMAIGEFVSVYSQYDIEVAQMKREN------GGQVEK----EKLPS 124

Query: 124 PLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPI 183
           P+QAAAASALAFSLGA+VPL+AA+F+++Y VR+  +VAAVTLAL +FGWLGA+LGKA   
Sbjct: 125 PMQAAAASALAFSLGAIVPLMAAAFVKDYHVRIGAIVAAVTLALVMFGWLGAVLGKAPVF 184

Query: 184 KSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           KS+ RVL+GGWLAMA+TFGLTKLIG   L
Sbjct: 185 KSSARVLIGGWLAMAVTFGLTKLIGTHSL 200

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BLAST of CmaCh15G006010 vs. Swiss-Prot
Match: VITH2_ARATH (Vacuolar iron transporter homolog 2 OS=Arabidopsis thaliana GN=At1g76800 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.3e-67
Identity = 142/205 (69.27%), Postives = 170/205 (82.93%), Query Frame = 1


Query: 14  QSGS------EIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILT 73
           QSGS      E ++  FDYSKR+QWLRAAVLGANDGLVSTASLMMG+GAVK D+KAMIL+
Sbjct: 3   QSGSNTNMDIEKESTTFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILS 62

Query: 74  GFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQA 133
           GFAG+VAGACSMAIGEFVSVYSQ DIEVAQ++R+ ++            + EKLP+P+QA
Sbjct: 63  GFAGMVAGACSMAIGEFVSVYSQYDIEVAQMERDSVE-----------IEKEKLPSPMQA 122

Query: 134 AAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTI 193
           AAASALAFS GA+VPLLAA+F++EYK+R++ VV AVT+AL VFGWLGA LGKA  ++S+ 
Sbjct: 123 AAASALAFSAGAIVPLLAAAFVKEYKMRIISVVVAVTVALMVFGWLGAALGKAPAVRSSA 182

Query: 194 RVLVGGWLAMAITFGLTKLIGVSGL 213
           RVL GGWLAMA+TFGLTKLIG+ GL
Sbjct: 183 RVLFGGWLAMAVTFGLTKLIGLYGL 196

[Close]

BLAST of CmaCh15G006010 vs. Swiss-Prot
Match: VTH21_ARATH (Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana GN=At3g25190 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-57
Identity = 122/202 (60.40%), Postives = 158/202 (78.22%), Query Frame = 1


Query: 13  QQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILTGFAGL 72
           Q++    +  E DY +RAQWLRAA+LGANDGLV+ ASLMMG+G++K+D+KAM+L GFAGL
Sbjct: 16  QKTRPRAEKEEVDYMQRAQWLRAALLGANDGLVTVASLMMGVGSIKEDVKAMLLVGFAGL 75

Query: 73  VAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEG--QEQESKDDEKLPNPLQAAAA 132
           VAGACSMAIGEFVSV +Q DIE AQ+KR    + +L    +++E +  E+LPNP QAA A
Sbjct: 76  VAGACSMAIGEFVSVCTQRDIETAQMKRAIEHKTSLSAIDEQEEEEKKERLPNPGQAAIA 135

Query: 133 SALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTIRVL 192
           SALAFS+GA +PLL A FI  +KVR+VVV    T+AL VFG  GA+LGK S +KS++RV+
Sbjct: 136 SALAFSVGAAMPLLGAVFIENHKVRMVVVAVVATIALVVFGVTGAVLGKTSVVKSSVRVV 195

Query: 193 VGGWLAMAITFGLTKLIGVSGL 213
           +GGW+AMA+TFGLTK IG + +
Sbjct: 196 IGGWMAMALTFGLTKFIGSAAM 217

[Close]

BLAST of CmaCh15G006010 vs. TrEMBL
Match: A0A0A0KCM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G057130 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.8e-89
Identity = 191/217 (88.02%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MEPNKLNLTNLEQQSGS-EIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQ 60
           M+PNKLNL NLEQQ  + EIQ  EFDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQ
Sbjct: 1   MDPNKLNLNNLEQQQSTLEIQAKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQ 60

Query: 61  DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQR-RNLEG---QEQES 120
           DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIE+AQIKREKLQR  N+EG   Q Q+S
Sbjct: 61  DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSNNMEGGVVQGQDS 120

Query: 121 KDDEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGA 180
           KD EKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRL VVVA+VTLAL VFGWLGA
Sbjct: 121 KDKEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVASVTLALAVFGWLGA 180

Query: 181 ILGKASPIKSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           ILGKASPIKS  RVL+GGWLAMAITFGLTKLIG SGL
Sbjct: 181 ILGKASPIKSAARVLIGGWLAMAITFGLTKLIGASGL 217

[Close]

BLAST of CmaCh15G006010 vs. TrEMBL
Match: B9GTK1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s07000g PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.1e-77
Identity = 167/209 (79.90%), Postives = 189/209 (90.43%), Query Frame = 1


Query: 6   LNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMI 65
           L + ++EQQ+  EI+T +FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQDIK MI
Sbjct: 15  LPINDVEQQATLEIETEDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMI 74

Query: 66  LTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQE--QESKDDEKLPN 125
           LTGFAGLVAGACSMAIGEFVSV+SQLDIE+AQ+KREK +RRN  G+E  +E ++ E LPN
Sbjct: 75  LTGFAGLVAGACSMAIGEFVSVHSQLDIELAQMKREK-ERRNNGGKEEQEEGENKESLPN 134

Query: 126 PLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPI 185
           PLQAAAASALAFS+GA+VPLLAASFIR YKVRL VVVAAVTLAL +FGWLGA+LGKA  +
Sbjct: 135 PLQAAAASALAFSVGALVPLLAASFIRGYKVRLGVVVAAVTLALLIFGWLGAVLGKAPTV 194

Query: 186 KSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           KS++RVLVGGWLAMAITFGLTKLIG SGL
Sbjct: 195 KSSLRVLVGGWLAMAITFGLTKLIGSSGL 222

[Close]

BLAST of CmaCh15G006010 vs. TrEMBL
Match: B9H7R1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s21310g PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-75
Identity = 161/207 (77.78%), Postives = 189/207 (91.30%), Query Frame = 1


Query: 6   LNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMI 65
           L ++++EQQ+  EI+T +FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQD+K MI
Sbjct: 15  LPVSDVEQQAALEIETEDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDLKVMI 74

Query: 66  LTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPL 125
           LTGFAGLVAGACSMAIGEFVSV+SQLDIE+AQ+KR++ QR++ E  E+E  ++E LPNPL
Sbjct: 75  LTGFAGLVAGACSMAIGEFVSVHSQLDIELAQMKRDR-QRKDTE--EKEEGENESLPNPL 134

Query: 126 QAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKS 185
            AAAASALAFS+GA+VPLLAASFIREYKVRL VVVAAVTLAL +FGWLGA+LGKA  ++S
Sbjct: 135 LAAAASALAFSVGALVPLLAASFIREYKVRLGVVVAAVTLALMIFGWLGAVLGKAPAVRS 194

Query: 186 TIRVLVGGWLAMAITFGLTKLIGVSGL 213
           ++RVLVGGWLAMAITFGLT+LIG SGL
Sbjct: 195 SLRVLVGGWLAMAITFGLTRLIGSSGL 218

[Close]

BLAST of CmaCh15G006010 vs. TrEMBL
Match: I1NH14_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G166100 PE=4 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 6.6e-75
Identity = 159/202 (78.71%), Postives = 182/202 (90.10%), Query Frame = 1


Query: 11  LEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILTGFA 70
           LEQQ   E++T +FDYSKR+QWLRAAVLGANDGLVSTASLMMG+GAVKQDIK MILTGFA
Sbjct: 20  LEQQEALEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFA 79

Query: 71  GLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQAAAA 130
           GLVAGACSMAIGEFVSVYSQLDIEVAQ+KREK +R N++ QE++  + EKLPNP+ AAAA
Sbjct: 80  GLVAGACSMAIGEFVSVYSQLDIEVAQMKREK-ERDNID-QEEDGYEKEKLPNPIHAAAA 139

Query: 131 SALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTIRVL 190
           SALAFS+GA+VPLLAASFIR+YKVRL V++ AV+LAL VFGWLGA+LGKA   +S +RVL
Sbjct: 140 SALAFSVGALVPLLAASFIRDYKVRLGVILGAVSLALVVFGWLGAVLGKAPTFRSCVRVL 199

Query: 191 VGGWLAMAITFGLTKLIGVSGL 213
           +GGWLAMAITFGLTKLIG SGL
Sbjct: 200 LGGWLAMAITFGLTKLIGSSGL 219

[Close]

BLAST of CmaCh15G006010 vs. TrEMBL
Match: A0A0B2SPD6_GLYSO (Vacuolar iron transporter-like protein 4 OS=Glycine soja GN=glysoja_031742 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.6e-75
Identity = 159/202 (78.71%), Postives = 182/202 (90.10%), Query Frame = 1


Query: 11  LEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILTGFA 70
           LEQQ   E++T +FDYSKR+QWLRAAVLGANDGLVSTASLMMG+GAVKQDIK MILTGFA
Sbjct: 20  LEQQEALEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFA 79

Query: 71  GLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQAAAA 130
           GLVAGACSMAIGEFVSVYSQLDIEVAQ+KREK +R N++ QE++  + EKLPNP+ AAAA
Sbjct: 80  GLVAGACSMAIGEFVSVYSQLDIEVAQMKREK-ERDNID-QEEDGYEKEKLPNPIHAAAA 139

Query: 131 SALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTIRVL 190
           SALAFS+GA+VPLLAASFIR+YKVRL V++ AV+LAL VFGWLGA+LGKA   +S +RVL
Sbjct: 140 SALAFSVGALVPLLAASFIRDYKVRLGVILGAVSLALVVFGWLGAVLGKAPTFRSCVRVL 199

Query: 191 VGGWLAMAITFGLTKLIGVSGL 213
           +GGWLAMAITFGLTKLIG SGL
Sbjct: 200 LGGWLAMAITFGLTKLIGSSGL 219

[Close]

BLAST of CmaCh15G006010 vs. TAIR10
Match: AT3G43660.1 (AT3G43660.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 261.5 bits (667), Expect = 4.4e-70
Identity = 151/212 (71.23%), Postives = 173/212 (81.60%), Query Frame = 1


Query: 1   MEPNKLNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQD 60
           ME N  NL NL+ +   E     FDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQD
Sbjct: 1   MESNNNNL-NLDMEKDQE---TTFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQD 60

Query: 61  IKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEK 120
           ++ M+LTGFAGLVAGACSMAIGEF+SVYSQ DIEVAQ+KRE        G E +    EK
Sbjct: 61  VRIMLLTGFAGLVAGACSMAIGEFISVYSQYDIEVAQMKRE-------SGGETKK---EK 120

Query: 121 LPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKA 180
           LP+P QAA ASALAF+LGA+VPLLAA+F++EYKVR+ V+VAAVTLAL +FGWLGA+LGKA
Sbjct: 121 LPSPTQAAIASALAFTLGAIVPLLAAAFVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKA 180

Query: 181 SPIKSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
             +KS +RVL+GGWLAMAITFG TKL+G  GL
Sbjct: 181 PVVKSLVRVLIGGWLAMAITFGFTKLVGSHGL 198

[Close]

BLAST of CmaCh15G006010 vs. TAIR10
Match: AT3G43630.1 (AT3G43630.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 260.8 bits (665), Expect = 7.5e-70
Identity = 150/202 (74.26%), Postives = 168/202 (83.17%), Query Frame = 1


Query: 7   NLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMIL 66
           N  NL+ +   E     FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQ++K MIL
Sbjct: 5   NTLNLDMEKDQE---KAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQNVKIMIL 64

Query: 67  TGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQ 126
           TGFAGLVAGACSMAIGEFVSVYSQ DIEVAQ+KRE        G E E    EKLP+P Q
Sbjct: 65  TGFAGLVAGACSMAIGEFVSVYSQYDIEVAQMKRE-------TGGEIEK---EKLPSPTQ 124

Query: 127 AAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKST 186
           AAAASALAFSLGAMVPLLAA+F++EYKVR+  +VAAVTLAL +FGWLGA+LGKA  +KS+
Sbjct: 125 AAAASALAFSLGAMVPLLAAAFVKEYKVRIGAIVAAVTLALVMFGWLGAVLGKAPVVKSS 184

Query: 187 IRVLVGGWLAMAITFGLTKLIG 209
           +RVLVGGWLAMAIT+G TKLIG
Sbjct: 185 LRVLVGGWLAMAITYGFTKLIG 193

[Close]

BLAST of CmaCh15G006010 vs. TAIR10
Match: AT1G21140.1 (AT1G21140.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 256.5 bits (654), Expect = 1.4e-68
Identity = 147/209 (70.33%), Postives = 170/209 (81.34%), Query Frame = 1


Query: 4   NKLNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKA 63
           N  N  NL+ +   E     FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQD+K 
Sbjct: 5   NVSNSLNLDMEMDQE---KAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDVKV 64

Query: 64  MILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPN 123
           MIL+GFAGLVAGACSMAIGEFVSVYSQ DIEVAQ+KRE        GQ ++    EKLP+
Sbjct: 65  MILSGFAGLVAGACSMAIGEFVSVYSQYDIEVAQMKREN------GGQVEK----EKLPS 124

Query: 124 PLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPI 183
           P+QAAAASALAFSLGA+VPL+AA+F+++Y VR+  +VAAVTLAL +FGWLGA+LGKA   
Sbjct: 125 PMQAAAASALAFSLGAIVPLMAAAFVKDYHVRIGAIVAAVTLALVMFGWLGAVLGKAPVF 184

Query: 184 KSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           KS+ RVL+GGWLAMA+TFGLTKLIG   L
Sbjct: 185 KSSARVLIGGWLAMAVTFGLTKLIGTHSL 200

[Close]

BLAST of CmaCh15G006010 vs. TAIR10
Match: AT1G76800.1 (AT1G76800.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 255.0 bits (650), Expect = 4.1e-68
Identity = 142/205 (69.27%), Postives = 170/205 (82.93%), Query Frame = 1


Query: 14  QSGS------EIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILT 73
           QSGS      E ++  FDYSKR+QWLRAAVLGANDGLVSTASLMMG+GAVK D+KAMIL+
Sbjct: 3   QSGSNTNMDIEKESTTFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILS 62

Query: 74  GFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQA 133
           GFAG+VAGACSMAIGEFVSVYSQ DIEVAQ++R+ ++            + EKLP+P+QA
Sbjct: 63  GFAGMVAGACSMAIGEFVSVYSQYDIEVAQMERDSVE-----------IEKEKLPSPMQA 122

Query: 134 AAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTI 193
           AAASALAFS GA+VPLLAA+F++EYK+R++ VV AVT+AL VFGWLGA LGKA  ++S+ 
Sbjct: 123 AAASALAFSAGAIVPLLAAAFVKEYKMRIISVVVAVTVALMVFGWLGAALGKAPAVRSSA 182

Query: 194 RVLVGGWLAMAITFGLTKLIGVSGL 213
           RVL GGWLAMA+TFGLTKLIG+ GL
Sbjct: 183 RVLFGGWLAMAVTFGLTKLIGLYGL 196

[Close]

BLAST of CmaCh15G006010 vs. TAIR10
Match: AT3G25190.1 (AT3G25190.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 223.8 bits (569), Expect = 1.0e-58
Identity = 122/202 (60.40%), Postives = 158/202 (78.22%), Query Frame = 1


Query: 13  QQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILTGFAGL 72
           Q++    +  E DY +RAQWLRAA+LGANDGLV+ ASLMMG+G++K+D+KAM+L GFAGL
Sbjct: 16  QKTRPRAEKEEVDYMQRAQWLRAALLGANDGLVTVASLMMGVGSIKEDVKAMLLVGFAGL 75

Query: 73  VAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEG--QEQESKDDEKLPNPLQAAAA 132
           VAGACSMAIGEFVSV +Q DIE AQ+KR    + +L    +++E +  E+LPNP QAA A
Sbjct: 76  VAGACSMAIGEFVSVCTQRDIETAQMKRAIEHKTSLSAIDEQEEEEKKERLPNPGQAAIA 135

Query: 133 SALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTIRVL 192
           SALAFS+GA +PLL A FI  +KVR+VVV    T+AL VFG  GA+LGK S +KS++RV+
Sbjct: 136 SALAFSVGAAMPLLGAVFIENHKVRMVVVAVVATIALVVFGVTGAVLGKTSVVKSSVRVV 195

Query: 193 VGGWLAMAITFGLTKLIGVSGL 213
           +GGW+AMA+TFGLTK IG + +
Sbjct: 196 IGGWMAMALTFGLTKFIGSAAM 217

[Close]

BLAST of CmaCh15G006010 vs. NCBI nr
Match: gi|659081804|ref|XP_008441522.1| (PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 4.7e-90
Identity = 193/217 (88.94%), Postives = 200/217 (92.17%), Query Frame = 1


Query: 1   MEPNKLNLTNLEQQSGS-EIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQ 60
           M+PNKLNL NLEQQ  + EIQT EFDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQ
Sbjct: 1   MDPNKLNLNNLEQQQSTLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQ 60

Query: 61  DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQR-RNLEG---QEQES 120
           DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIE+AQIKREKLQR  N+EG   Q QES
Sbjct: 61  DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSNNMEGGVVQGQES 120

Query: 121 KDDEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGA 180
           KD EKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRL VVVA+VTLAL VFGWLGA
Sbjct: 121 KDKEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVASVTLALAVFGWLGA 180

Query: 181 ILGKASPIKSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           +LGKASPIKS  RVLVGGWLAMAITFGLTKLIG SGL
Sbjct: 181 VLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 217

[Close]

BLAST of CmaCh15G006010 vs. NCBI nr
Match: gi|449446421|ref|XP_004140970.1| (PREDICTED: vacuolar iron transporter homolog 4 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 4.0e-89
Identity = 191/217 (88.02%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MEPNKLNLTNLEQQSGS-EIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQ 60
           M+PNKLNL NLEQQ  + EIQ  EFDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQ
Sbjct: 1   MDPNKLNLNNLEQQQSTLEIQAKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQ 60

Query: 61  DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQR-RNLEG---QEQES 120
           DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIE+AQIKREKLQR  N+EG   Q Q+S
Sbjct: 61  DIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSNNMEGGVVQGQDS 120

Query: 121 KDDEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGA 180
           KD EKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRL VVVA+VTLAL VFGWLGA
Sbjct: 121 KDKEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVASVTLALAVFGWLGA 180

Query: 181 ILGKASPIKSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           ILGKASPIKS  RVL+GGWLAMAITFGLTKLIG SGL
Sbjct: 181 ILGKASPIKSAARVLIGGWLAMAITFGLTKLIGASGL 217

[Close]

BLAST of CmaCh15G006010 vs. NCBI nr
Match: gi|224066721|ref|XP_002302185.1| (hypothetical protein POPTR_0002s07000g [Populus trichocarpa])

HSP 1 Score: 295.8 bits (756), Expect = 5.9e-77
Identity = 167/209 (79.90%), Postives = 189/209 (90.43%), Query Frame = 1


Query: 6   LNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMI 65
           L + ++EQQ+  EI+T +FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQDIK MI
Sbjct: 15  LPINDVEQQATLEIETEDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMI 74

Query: 66  LTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQE--QESKDDEKLPN 125
           LTGFAGLVAGACSMAIGEFVSV+SQLDIE+AQ+KREK +RRN  G+E  +E ++ E LPN
Sbjct: 75  LTGFAGLVAGACSMAIGEFVSVHSQLDIELAQMKREK-ERRNNGGKEEQEEGENKESLPN 134

Query: 126 PLQAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPI 185
           PLQAAAASALAFS+GA+VPLLAASFIR YKVRL VVVAAVTLAL +FGWLGA+LGKA  +
Sbjct: 135 PLQAAAASALAFSVGALVPLLAASFIRGYKVRLGVVVAAVTLALLIFGWLGAVLGKAPTV 194

Query: 186 KSTIRVLVGGWLAMAITFGLTKLIGVSGL 213
           KS++RVLVGGWLAMAITFGLTKLIG SGL
Sbjct: 195 KSSLRVLVGGWLAMAITFGLTKLIGSSGL 222

[Close]

BLAST of CmaCh15G006010 vs. NCBI nr
Match: gi|743899096|ref|XP_011042839.1| (PREDICTED: vacuolar iron transporter homolog 1-like [Populus euphratica])

HSP 1 Score: 294.3 bits (752), Expect = 1.7e-76
Identity = 163/205 (79.51%), Postives = 183/205 (89.27%), Query Frame = 1


Query: 8   LTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILT 67
           + ++EQQ+  EI+T +FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQDIK MILT
Sbjct: 17  INDVEQQATLEIETEDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILT 76

Query: 68  GFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPLQA 127
           GFAGLVAGACSMAIGEFVSV+SQLDIE+AQ+KRE  +R N   +EQE    E LPNPLQA
Sbjct: 77  GFAGLVAGACSMAIGEFVSVHSQLDIELAQMKRENERRNNGGKEEQEEGAKESLPNPLQA 136

Query: 128 AAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKSTI 187
           AAASALAFS+GA+VPLLAASFIR YKVRL VVVAAVTLAL +FGWLGA+LGKA  ++S++
Sbjct: 137 AAASALAFSVGALVPLLAASFIRGYKVRLGVVVAAVTLALMIFGWLGAVLGKAPAVRSSL 196

Query: 188 RVLVGGWLAMAITFGLTKLIGVSGL 213
           RVLVGGWLAMAITFGLTKLIG SGL
Sbjct: 197 RVLVGGWLAMAITFGLTKLIGSSGL 221

[Close]

BLAST of CmaCh15G006010 vs. NCBI nr
Match: gi|224082432|ref|XP_002306691.1| (hypothetical protein POPTR_0005s21310g [Populus trichocarpa])

HSP 1 Score: 290.0 bits (741), Expect = 3.3e-75
Identity = 161/207 (77.78%), Postives = 189/207 (91.30%), Query Frame = 1


Query: 6   LNLTNLEQQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMI 65
           L ++++EQQ+  EI+T +FDYSKRAQWLRAAVLGANDGLVSTASLMMG+GAVKQD+K MI
Sbjct: 15  LPVSDVEQQAALEIETEDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDLKVMI 74

Query: 66  LTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQIKREKLQRRNLEGQEQESKDDEKLPNPL 125
           LTGFAGLVAGACSMAIGEFVSV+SQLDIE+AQ+KR++ QR++ E  E+E  ++E LPNPL
Sbjct: 75  LTGFAGLVAGACSMAIGEFVSVHSQLDIELAQMKRDR-QRKDTE--EKEEGENESLPNPL 134

Query: 126 QAAAASALAFSLGAMVPLLAASFIREYKVRLVVVVAAVTLALGVFGWLGAILGKASPIKS 185
            AAAASALAFS+GA+VPLLAASFIREYKVRL VVVAAVTLAL +FGWLGA+LGKA  ++S
Sbjct: 135 LAAAASALAFSVGALVPLLAASFIREYKVRLGVVVAAVTLALMIFGWLGAVLGKAPAVRS 194

Query: 186 TIRVLVGGWLAMAITFGLTKLIGVSGL 213
           ++RVLVGGWLAMAITFGLT+LIG SGL
Sbjct: 195 SLRVLVGGWLAMAITFGLTRLIGSSGL 218

The following BLAST results are available for this feature:

BLAST of CmaCh15G006010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VITH4_ARATH	7.8e-69	71.23	Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana GN=At3g43660 PE=2 SV...	[more]
VITH3_ARATH	1.3e-68	74.26	Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana GN=At3g43630 PE=3 SV...	[more]
VITH1_ARATH	2.5e-67	70.33	Vacuolar iron transporter homolog 1 OS=Arabidopsis thaliana GN=At1g21140 PE=2 SV...	[more]
VITH2_ARATH	7.3e-67	69.27	Vacuolar iron transporter homolog 2 OS=Arabidopsis thaliana GN=At1g76800 PE=2 SV...	[more]
VTH21_ARATH	1.8e-57	60.40	Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana GN=At3g25190 PE=1 ...	[more]

BLAST of CmaCh15G006010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCM7_CUCSA	2.8e-89	88.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G057130 PE=4 SV=1	[more]
B9GTK1_POPTR	4.1e-77	79.90	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s07000g PE=4 SV=1	[more]
B9H7R1_POPTR	2.3e-75	77.78	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s21310g PE=4 SV=1	[more]
I1NH14_SOYBN	6.6e-75	78.71	Uncharacterized protein OS=Glycine max GN=GLYMA_20G166100 PE=4 SV=2	[more]
A0A0B2SPD6_GLYSO	6.6e-75	78.71	Vacuolar iron transporter-like protein 4 OS=Glycine soja GN=glysoja_031742 PE=4 ...	[more]

BLAST of CmaCh15G006010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43660.1	4.4e-70	71.23	Vacuolar iron transporter (VIT) family protein	[more]
AT3G43630.1	7.5e-70	74.26	Vacuolar iron transporter (VIT) family protein	[more]
AT1G21140.1	1.4e-68	70.33	Vacuolar iron transporter (VIT) family protein	[more]
AT1G76800.1	4.1e-68	69.27	Vacuolar iron transporter (VIT) family protein	[more]
AT3G25190.1	1.0e-58	60.40	Vacuolar iron transporter (VIT) family protein	[more]

BLAST of CmaCh15G006010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081804\|ref\|XP_008441522.1\|	4.7e-90	88.94	PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis melo]	[more]
gi\|449446421\|ref\|XP_004140970.1\|	4.0e-89	88.02	PREDICTED: vacuolar iron transporter homolog 4 [Cucumis sativus]	[more]
gi\|224066721\|ref\|XP_002302185.1\|	5.9e-77	79.90	hypothetical protein POPTR_0002s07000g [Populus trichocarpa]	[more]
gi\|743899096\|ref\|XP_011042839.1\|	1.7e-76	79.51	PREDICTED: vacuolar iron transporter homolog 1-like [Populus euphratica]	[more]
gi\|224082432\|ref\|XP_002306691.1\|	3.3e-75	77.78	hypothetical protein POPTR_0005s21310g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008217	Ccc1_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G006010.1	CmaCh15G006010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008217	Ccc1 family	PFAM	PF01988	VIT1	coord: 114..204 score: 1.4E-18coord: 33..114 score: 9.9
None	No IPR available	unknown	Coil	Coil	coord: 93..118 scor
None	No IPR available	PANTHER	PTHR31851	FAMILY NOT NAMED	coord: 18..207 score: 4.7E
None	No IPR available	PANTHER	PTHR31851:SF15	SUBFAMILY NOT NAMED	coord: 18..207 score: 4.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G006010	Cucsa.363650	Cucumber (Gy14) v1	cgycmaB0995
CmaCh15G006010	Cla013822	Watermelon (97103) v1	cmawmB260
CmaCh15G006010	Csa6G057130	Cucumber (Chinese Long) v2	cmacuB308
CmaCh15G006010	MELO3C008350	Melon (DHL92) v3.5.1	cmameB268
CmaCh15G006010	ClCG08G006940	Watermelon (Charleston Gray)	cmawcgB273
CmaCh15G006010	CSPI06G04960	Wild cucumber (PI 183967)	cmacpiB315
CmaCh15G006010	CmoCh04G025610	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G006010	CmoCh15G006070	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G006010	Lsi08G005510	Bottle gourd (USVL1VR-Ls)	cmalsiB294
CmaCh15G006010	Cp4.1LG13g04000	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G006010	Cp4.1LG01g21060	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G006010	MELO3C008350.2	Melon (DHL92) v3.6.1	cmamedB309
CmaCh15G006010	CsaV3_1G019670	Cucumber (Chinese Long) v3	cmacucB0325
CmaCh15G006010	CsaV3_6G005300	Cucumber (Chinese Long) v3	cmacucB0362
CmaCh15G006010	Cla97C08G149630	Watermelon (97103) v2	cmawmbB319
CmaCh15G006010	Bhi04G001370	Wax gourd	cmawgoB0391
CmaCh15G006010	CsGy6G004880	Cucumber (Gy14) v2	cgybcmaB740
CmaCh15G006010	Carg15788	Silver-seed gourd	carcmaB0087

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G006010	CmaCh04G024450	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G006010	Cucumber (Chinese Long) v3	cmacucB0370
CmaCh15G006010	Watermelon (97103) v2	cmawmbB323
CmaCh15G006010	Cucumber (Gy14) v1	cgycmaB0135
CmaCh15G006010	Cucurbita moschata (Rifu)	cmacmoB283
CmaCh15G006010	Cucumber (Chinese Long) v2	cmacuB317
CmaCh15G006010	Watermelon (Charleston Gray)	cmawcgB245
CmaCh15G006010	Watermelon (97103) v1	cmawmB253
CmaCh15G006010	Cucurbita pepo (Zucchini)	cmacpeB335
CmaCh15G006010	Bottle gourd (USVL1VR-Ls)	cmalsiB273
CmaCh15G006010	Cucumber (Gy14) v2	cgybcmaB917
CmaCh15G006010	Silver-seed gourd	carcmaB1148