CsaV3_6G005300 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGAGCTTTTTACATTTCTTCAAAGGTGGACAGAATTTTGCATTATTCCACTCTAATTTCTATAGAATTTTCTTCCTTGTTTTTTTAATTAATTTTCCTAAGCGTCACTTTTGAATAACTTTTTTCCCCTTATAATCATAAACAATTTACTAATCAAAATTCTAACCACTGGTTTGAGATTCCAAGTTTCTCATTCTAAATTGAACTCCAAATAAATAAATAAATAAATGTAGGGTTAAATTGGATATTTGATCTATGCTACTTTGAATTTATTTCTCATGCTTTGAATTTATTTCTGATGATTGGTTGAAACCTCGTAAATGTTTTCTATAGTTTGATAAAATCACATCAACGAGTATTTATGATGATTTATCAAGTTAGGGATAAATTATAGTTATAAATAATAGGAATAAAATTCTAATTCTTTTTGAGGTTGTAGTGAACAAATTTACAATTTAACCTAAAAATAAGTGTGCATCAAAGTTAATAGTAAAATTTAATCCTTTCACAGGTGTTTGGAAAGAGGTGAAATAGTGAGTTGTAAGGAGTTCCGAGGAATAGGGACTCTACAATGTAGTTAAGGAGCTGATAAAGTTTAAAATTAATGTTTTGAGCAGTGGAACTCACAAACTTCTTGAAACAAACAAAGAGTGAAGTTTTCAACTCCTACTTCTTAACTTTTTTGGGTTAAAGACCTTGTTTTTATTTTACAAAAAGAACATGAATCATGAATCATGAATCATGAATGAACTCTTTTAGAAGAGTGTTTGTTAGATAAGTAAAATGTTTCCTATGAAAACTAATAAACAAATGTATAAATTCAACCATTTGTAATTATCATTTCAAAAGTTGATGCTTCAATTTCACACCACGGGGTAGGATAGGATAGTGTATAACTAATGTTTGTGTATTGAAGGTCAATTGTAAGAGCATAATCATTATGCTTTAAATAAACTTTGACCACTGTTTTGAAACATTTGTTGATGGATATACAAATGATATGCAAGAATGGACATTTTCATTATTGAGCAACATTTTGGAAGAAAAAAAAAAGGATGAAAATCTGCCTCCTCCATTGGGAGTATATGTCTACTTTTAAAAGAGGATAAAAATATTTTTTAAAAAAGAAAAGAAAAGTTGGTTTCTTTTAATTTTGTCATTAATTTTAAAGTGGCTCTTGTGTGTGAACTCCACTTTGTTGTTTCATCTTCAAAATCCCAAATAAAGCTTTTTGGTTTTTCCTCCATAAATACCCTTCTTCAAGGCGTGTGTCCTCCACAATTCCTCTTCTCATCATCATCTCTTTCATTTCTTTTCTTCAAACCTCATTCCCTTTTCTTCCTTTTAATTAATTCCCTTCCCAGATGGATCCCAACAAATTAAACCTAAATAACTTGGAGCAACAGCAATCTACTTTGGAGATCCAAGCAAAGGAATTCGACTACTCAAAACGCGCACAATGGCTACGCGCGCGCAGTACTCGGCGCCAACGACGGCCTTGTCTCGACCGCGTCGCTCATGATGGGAGTTGGAGCTGTCAAACAAGACATCAAGGCCATGATCCTCACCGGTTTCGCCGGTCTAGTAGCTGGTGCGTGTAGTATGGCGATTGGCGAATTTGTGTCTGTTTACTCTCAACTAGACATCGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGATCAAATAATATGGAAGGAGGAGTAGTACAAGGGCAAGACAGCAAAGATAAAGAAAAGCTACCAAATCCACTCCAAGCAGCTGCAGCCTCAGCCTTGGCCTTCTCTCTTGGAGCAATGGTCCCATTGTTGGCTGCTTCCTTTATAAGAGAATATAAAGTAAGACTCGCAGTGGTCGTGGCATCGGTGACGTTAGCTCTCGCCGTGTTCGGGTGGCTAGGTGCCATTCTTGGAAAAGCATCACCAATCAAATCAGCTGCTAGAGTGTTGATCGGAGGTTGGTTAGCTATGGCTATAACCTTTGGCTTGACGAAGCTAATCGGAGCGAGTGGACTCTAG ATGTTTGAGCTTTTTACATTTCTTCAAAGCAATCTACTTTGGAGATCCAAGCAAAGGAATTCGACTACTCAAAACGCGCACAATGGCTACGCGCGCGCAGTACTCGGCGCCAACGACGGCCTTGTCTCGACCGCGTCGCTCATGATGGGAGTTGGAGCTGTCAAACAAGACATCAAGGCCATGATCCTCACCGGTTTCGCCGGTCTAGTAGCTGGTGCGTGTAGTATGGCGATTGGCGAATTTGTGTCTGTTTACTCTCAACTAGACATCGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGATCAAATAATATGGAAGGAGGAGTAGTACAAGGGCAAGACAGCAAAGATAAAGAAAAGCTACCAAATCCACTCCAAGCAGCTGCAGCCTCAGCCTTGGCCTTCTCTCTTGGAGCAATGGTCCCATTGTTGGCTGCTTCCTTTATAAGAGAATATAAAGTAAGACTCGCAGTGGTCGTGGCATCGGTGACGTTAGCTCTCGCCGTGTTCGGGTGGCTAGGTGCCATTCTTGGAAAAGCATCACCAATCAAATCAGCTGCTAGAGTGTTGATCGGAGGTTGGTTAGCTATGGCTATAACCTTTGGCTTGACGAAGCTAATCGGAGCGAGTGGACTCTAG ATGTTTGAGCTTTTTACATTTCTTCAAAGCAATCTACTTTGGAGATCCAAGCAAAGGAATTCGACTACTCAAAACGCGCACAATGGCTACGCGCGCGCAGTACTCGGCGCCAACGACGGCCTTGTCTCGACCGCGTCGCTCATGATGGGAGTTGGAGCTGTCAAACAAGACATCAAGGCCATGATCCTCACCGGTTTCGCCGGTCTAGTAGCTGGTGCGTGTAGTATGGCGATTGGCGAATTTGTGTCTGTTTACTCTCAACTAGACATCGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGATCAAATAATATGGAAGGAGGAGTAGTACAAGGGCAAGACAGCAAAGATAAAGAAAAGCTACCAAATCCACTCCAAGCAGCTGCAGCCTCAGCCTTGGCCTTCTCTCTTGGAGCAATGGTCCCATTGTTGGCTGCTTCCTTTATAAGAGAATATAAAGTAAGACTCGCAGTGGTCGTGGCATCGGTGACGTTAGCTCTCGCCGTGTTCGGGTGGCTAGGTGCCATTCTTGGAAAAGCATCACCAATCAAATCAGCTGCTAGAGTGTTGATCGGAGGTTGGTTAGCTATGGCTATAACCTTTGGCTTGACGAAGCTAATCGGAGCGAGTGGACTCTAG MFELFTFLQSNLLWRSKQRNSTTQNAHNGYARAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSNNMEGGVVQGQDSKDKEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVASVTLALAVFGWLGAILGKASPIKSAARVLIGGWLAMAITFGLTKLIGASGL
BLAST of CsaV3_6G005300 vs. NCBI nr
Match: XP_004140970.1 (PREDICTED: vacuolar iron transporter homolog 4 [Cucumis sativus] >KGN46147.1 hypothetical protein Csa_6G057130 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. NCBI nr
Match: XP_008441522.1 (PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis melo]) HSP 1 Score: 323.6 bits (828), Expect = 5.2e-85 Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. NCBI nr
Match: XP_022993928.1 (vacuolar iron transporter homolog 4-like [Cucurbita maxima]) HSP 1 Score: 285.8 bits (730), Expect = 1.2e-73 Identity = 169/210 (80.48%), Postives = 178/210 (84.76%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. NCBI nr
Match: XP_023551056.1 (vacuolar iron transporter homolog 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 284.3 bits (726), Expect = 3.5e-73 Identity = 168/210 (80.00%), Postives = 177/210 (84.29%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. NCBI nr
Match: XP_022939301.1 (vacuolar iron transporter homolog 4-like [Cucurbita moschata]) HSP 1 Score: 283.1 bits (723), Expect = 7.8e-73 Identity = 167/210 (79.52%), Postives = 179/210 (85.24%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TAIR10
Match: AT1G21140.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 238.4 bits (607), Expect = 4.0e-63 Identity = 133/181 (73.48%), Postives = 153/181 (84.53%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TAIR10
Match: AT3G43630.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 237.7 bits (605), Expect = 6.8e-63 Identity = 132/178 (74.16%), Postives = 152/178 (85.39%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TAIR10
Match: AT3G43660.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 236.1 bits (601), Expect = 2.0e-62 Identity = 130/181 (71.82%), Postives = 153/181 (84.53%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TAIR10
Match: AT1G76800.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 196.8 bits (499), Expect = 1.3e-50 Identity = 113/181 (62.43%), Postives = 134/181 (74.03%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TAIR10
Match: AT3G25190.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 196.1 bits (497), Expect = 2.3e-50 Identity = 110/181 (60.77%), Postives = 140/181 (77.35%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. Swiss-Prot
Match: sp|Q9LPU9|VITH1_ARATH (Vacuolar iron transporter homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g21140 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 7.2e-62 Identity = 133/181 (73.48%), Postives = 153/181 (84.53%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. Swiss-Prot
Match: sp|Q9M2C3|VITH3_ARATH (Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At3g43630 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.2e-61 Identity = 132/178 (74.16%), Postives = 152/178 (85.39%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. Swiss-Prot
Match: sp|Q9M2C0|VITH4_ARATH (Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At3g43660 PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.6e-61 Identity = 130/181 (71.82%), Postives = 153/181 (84.53%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. Swiss-Prot
Match: sp|Q9SRD3|VITH2_ARATH (Vacuolar iron transporter homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g76800 PE=2 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.4e-49 Identity = 113/181 (62.43%), Postives = 134/181 (74.03%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. Swiss-Prot
Match: sp|Q9LSF6|VTH21_ARATH (Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana OX=3702 GN=At3g25190 PE=1 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.1e-49 Identity = 110/181 (60.77%), Postives = 140/181 (77.35%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TrEMBL
Match: tr|A0A0A0KCM7|A0A0A0KCM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057130 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 7.0e-86 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TrEMBL
Match: tr|A0A1S3B368|A0A1S3B368_CUCME (vacuolar iron transporter homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103485624 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.5e-85 Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TrEMBL
Match: tr|A0A061FJ80|A0A061FJ80_THECC (Vacuolar iron transporter family protein OS=Theobroma cacao OX=3641 GN=TCM_035533 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 7.2e-67 Identity = 147/181 (81.22%), Postives = 159/181 (87.85%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TrEMBL
Match: tr|A0A0L9T5Y3|A0A0L9T5Y3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan213s000600 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.8e-66 Identity = 142/181 (78.45%), Postives = 163/181 (90.06%), Query Frame = 0
BLAST of CsaV3_6G005300 vs. TrEMBL
Match: tr|A0A0S3TA47|A0A0S3TA47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G151500 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.8e-66 Identity = 142/181 (78.45%), Postives = 163/181 (90.06%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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