CmaCh15G003570 (gene) Cucurbita maxima (Rimu)

NameCmaCh15G003570
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_74
LocationCma_Chr15 : 1641430 .. 1641744 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTCTCAAAAAAGTCGCAAATCGACGGCGGATTAGAAGCAGAAGGGAAAAAATGGGTAATCGCCGGGCTGCCGGCGAGGTCATCGTTGAAGCCGATTAGCACAAAATCTAGAGCAAAAGACGGCGAGGACGACTGCGAGAAGTCGCGTTCAACAACGCCGACGGCGAAAGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGGCGGCGCCGAGAAAGCGTAGGTCGCTAAAATCAAGCTCTAATCAAAATCATGGTAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTTAAGATCCGAGTTTAG

mRNA sequence

ATGGGATTCTCAAAAAAGTCGCAAATCGACGGCGGATTAGAAGCAGAAGGGAAAAAATGGGTAATCGCCGGGCTGCCGGCGAGGTCATCGTTGAAGCCGATTAGCACAAAATCTAGAGCAAAAGACGGCGAGGACGACTGCGAGAAGTCGCGTTCAACAACGCCGACGGCGAAAGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGGCGGCGCCGAGAAAGCGTAGGTCGCTAAAATCAAGCTCTAATCAAAATCATGGTAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTTAAGATCCGAGTTTAG

Coding sequence (CDS)

ATGGGATTCTCAAAAAAGTCGCAAATCGACGGCGGATTAGAAGCAGAAGGGAAAAAATGGGTAATCGCCGGGCTGCCGGCGAGGTCATCGTTGAAGCCGATTAGCACAAAATCTAGAGCAAAAGACGGCGAGGACGACTGCGAGAAGTCGCGTTCAACAACGCCGACGGCGAAAGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGGCGGCGCCGAGAAAGCGTAGGTCGCTAAAATCAAGCTCTAATCAAAATCATGGTAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTTAAGATCCGAGTTTAG

Protein sequence

MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV
BLAST of CmaCh15G003570 vs. TrEMBL
Match: A0A0A0KUE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523070 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.8e-37
Identity = 84/104 (80.77%), Postives = 89/104 (85.58%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQID G E E KKWVIAGL ARSSLKPI+TKS+ K+GEDD +K    TPT KEA
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK----TPTGKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

BLAST of CmaCh15G003570 vs. TrEMBL
Match: W9SPZ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020561 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.6e-29
Identity = 74/103 (71.84%), Postives = 86/103 (83.50%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKD-GEDDCEKSRSTTPTAKE 60
           MGFSKKSQIDGGLE+EG+KWVIAG+  RSSLKPI+TK R KD  EDD E+S STTPT KE
Sbjct: 1   MGFSKKSQIDGGLESEGRKWVIAGISVRSSLKPINTKPRGKDIEEDDNEESCSTTPTEKE 60

Query: 61  ARIPEKLSCPAAPRKRR-SLKSSSNQNHG-REFFNPPDLESVF 101
           ARIPE+L CP APRKRR +L+ ++N  +G REFF PPDLE+VF
Sbjct: 61  ARIPERLPCPPAPRKRRPALRCNNNSFNGVREFFTPPDLETVF 103

BLAST of CmaCh15G003570 vs. TrEMBL
Match: A0A067LD61_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10261 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.0e-28
Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKD-GE-DDCEKSRSTTPTAK 60
           MGFSKK+Q+D  L++EGKKWVIAG+  R+SLKPI+TK R KD GE +D E+  STTPTAK
Sbjct: 1   MGFSKKAQVDSSLDSEGKKWVIAGIAIRTSLKPINTKPRGKDIGEAEDEEEECSTTPTAK 60

Query: 61  EARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           EARIPE+L CP APRKRR +   +  N  REFFNPPDLESVFK  V
Sbjct: 61  EARIPERLPCPPAPRKRRPVSRCNYNNSVREFFNPPDLESVFKCYV 106

BLAST of CmaCh15G003570 vs. TrEMBL
Match: M5XAI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020389mg PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.9e-28
Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGE-DDCEKSRSTTPTAKE 60
           MGFSKKSQ+DGGLE+EGKKWVIAG+  R+SLKPI+TK RAK+ E  + E++ STTPTAKE
Sbjct: 1   MGFSKKSQVDGGLESEGKKWVIAGISVRTSLKPINTKLRAKESEAGEEEEASSTTPTAKE 60

Query: 61  ARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           ARIPE  SCP APRK R   S  N N  REFF PPDL+SVFK+ V
Sbjct: 61  ARIPEIFSCPPAPRKSRP-PSRCNFNGVREFFTPPDLDSVFKLHV 104

BLAST of CmaCh15G003570 vs. TrEMBL
Match: B9S646_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1064360 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.1e-28
Identity = 73/108 (67.59%), Postives = 85/108 (78.70%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAK---DGEDDCEKSRSTTPTA 60
           MGFSKKSQ+D GL++EGKKWVIAG+  R+SLKPIST+ RAK   +G+D  E+  STTPTA
Sbjct: 1   MGFSKKSQVDSGLDSEGKKWVIAGIAIRTSLKPISTRPRAKASENGDDSEEEQCSTTPTA 60

Query: 61  KEARIPEKLSCPAAPRKRRSLKSSSNQNHG-REFFNPPDLESVFKIRV 105
           KE+RIPE+L CP APRKRR   S  N N G REFF+PPDLESVFK  V
Sbjct: 61  KESRIPERLPCPPAPRKRR--PSRCNYNSGVREFFSPPDLESVFKCYV 106

BLAST of CmaCh15G003570 vs. TAIR10
Match: AT5G40460.1 (AT5G40460.1 unknown protein)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-25
Identity = 68/110 (61.82%), Postives = 80/110 (72.73%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRA-----KDGEDDC---EKSRS 60
           MGFSKKSQ +GGLE++GKKWVIAG+  R+SLKP+ TK RA      + E+DC   E+  S
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  TTPTAKEARIPEKLSCPAAPRKRR-SLKSSSNQNHGREFFNPP-DLESVF 101
           TTPTAKE +IPE L CP APRKRR +LK  SN    REFF PP DLE+VF
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNV--VREFFTPPSDLETVF 108

BLAST of CmaCh15G003570 vs. TAIR10
Match: AT1G10690.1 (AT1G10690.1 unknown protein)

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-15
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 1

Query: 1   MGFSKKS--QIDGGLE--AEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPT 60
           MG+S K   Q+DG +    +GKKWVIAG+P+RS LK I+        E + +    TTPT
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQDQCPTTPT 60

Query: 61  AKEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           A   RIP    CPAAP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  AVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

BLAST of CmaCh15G003570 vs. TAIR10
Match: AT1G60783.1 (AT1G60783.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 2.4e-13
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 1

Query: 1   MGFSKKS--QIDGGLE--AEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPT 60
           MGFS K+  Q D       EGKK VI G+   S++KPIS  S A    +D E    TTPT
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED-EDLCPTTPT 60

Query: 61  AKEARIPEKLSCPAAPRKRR-SLKSSSNQNHGREFFNPPDLESVFKIR 104
           A   RIP  + CP AP+KR+ +LK S      REFF+PPDLE+VF  R
Sbjct: 61  ADSVRIPTVIPCPPAPKKRKLTLKVSYGP---REFFSPPDLETVFIYR 104

BLAST of CmaCh15G003570 vs. TAIR10
Match: AT3G27630.1 (AT3G27630.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-11
Identity = 43/100 (43.00%), Postives = 54/100 (54.00%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MG SKKSQ+   L+ +GKK++ A    R+SLKP+ TK    + E   E     TPTA+ A
Sbjct: 1   MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERES--EDGICITPTARGA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVF 101
           + PE   CPAAPRKR  +    N      F  P D E VF
Sbjct: 61  KTPE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

BLAST of CmaCh15G003570 vs. NCBI nr
Match: gi|659117810|ref|XP_008458799.1| (PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-37
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQID G EAE KKWVIAGL ARSSLKPI+TKS+ K+GE+D EK    TPT KEA
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

BLAST of CmaCh15G003570 vs. NCBI nr
Match: gi|449450076|ref|XP_004142790.1| (PREDICTED: uncharacterized protein LOC101222088 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 84/104 (80.77%), Postives = 89/104 (85.58%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKKSQID G E E KKWVIAGL ARSSLKPI+TKS+ K+GEDD +K    TPT KEA
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK----TPTGKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

BLAST of CmaCh15G003570 vs. NCBI nr
Match: gi|703146533|ref|XP_010108825.1| (hypothetical protein L484_020561 [Morus notabilis])

HSP 1 Score: 135.2 bits (339), Expect = 6.6e-29
Identity = 74/103 (71.84%), Postives = 86/103 (83.50%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKD-GEDDCEKSRSTTPTAKE 60
           MGFSKKSQIDGGLE+EG+KWVIAG+  RSSLKPI+TK R KD  EDD E+S STTPT KE
Sbjct: 1   MGFSKKSQIDGGLESEGRKWVIAGISVRSSLKPINTKPRGKDIEEDDNEESCSTTPTEKE 60

Query: 61  ARIPEKLSCPAAPRKRR-SLKSSSNQNHG-REFFNPPDLESVF 101
           ARIPE+L CP APRKRR +L+ ++N  +G REFF PPDLE+VF
Sbjct: 61  ARIPERLPCPPAPRKRRPALRCNNNSFNGVREFFTPPDLETVF 103

BLAST of CmaCh15G003570 vs. NCBI nr
Match: gi|743939374|ref|XP_011014136.1| (PREDICTED: uncharacterized protein LOC105117996 [Populus euphratica])

HSP 1 Score: 132.9 bits (333), Expect = 3.3e-28
Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60
           MGFSKK+Q+D GL++EGKKWVIAG+  R+SLKP++TKSR KD + D E+  STTPTAKEA
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPVNTKSRVKDCDGDEEEEFSTTPTAKEA 60

Query: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           RIPE+L CP APRKRR   S  N +  REFF PPDLE+VFK  V
Sbjct: 61  RIPERLPCPPAPRKRRP-SSRCNYSGVREFFTPPDLETVFKCYV 103

BLAST of CmaCh15G003570 vs. NCBI nr
Match: gi|802539655|ref|XP_012072102.1| (PREDICTED: uncharacterized protein LOC105633985 [Jatropha curcas])

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-28
Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 1

Query: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKD-GE-DDCEKSRSTTPTAK 60
           MGFSKK+Q+D  L++EGKKWVIAG+  R+SLKPI+TK R KD GE +D E+  STTPTAK
Sbjct: 1   MGFSKKAQVDSSLDSEGKKWVIAGIAIRTSLKPINTKPRGKDIGEAEDEEEECSTTPTAK 60

Query: 61  EARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 105
           EARIPE+L CP APRKRR +   +  N  REFFNPPDLESVFK  V
Sbjct: 61  EARIPERLPCPPAPRKRRPVSRCNYNNSVREFFNPPDLESVFKCYV 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KUE2_CUCSA7.8e-3780.77Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523070 PE=4 SV=1[more]
W9SPZ1_9ROSA4.6e-2971.84Uncharacterized protein OS=Morus notabilis GN=L484_020561 PE=4 SV=1[more]
A0A067LD61_JATCU3.0e-2866.98Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10261 PE=4 SV=1[more]
M5XAI6_PRUPE3.9e-2868.57Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020389mg PE=4 SV=1[more]
B9S646_RICCO5.1e-2867.59Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1064360 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G40460.11.6e-2561.82 unknown protein[more]
AT1G10690.13.4e-1545.19 unknown protein[more]
AT1G60783.12.4e-1348.15 unknown protein[more]
AT3G27630.11.3e-1143.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659117810|ref|XP_008458799.1|2.3e-3781.73PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo][more]
gi|449450076|ref|XP_004142790.1|1.1e-3680.77PREDICTED: uncharacterized protein LOC101222088 [Cucumis sativus][more]
gi|703146533|ref|XP_010108825.1|6.6e-2971.84hypothetical protein L484_020561 [Morus notabilis][more]
gi|743939374|ref|XP_011014136.1|3.3e-2866.35PREDICTED: uncharacterized protein LOC105117996 [Populus euphratica][more]
gi|802539655|ref|XP_012072102.1|4.3e-2866.98PREDICTED: uncharacterized protein LOC105633985 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G003570.1CmaCh15G003570.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 1..104
score: 8.7
NoneNo IPR availablePANTHERPTHR33142:SF9CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR2-RELATEDcoord: 1..104
score: 8.7

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh15G003570CmaCh04G026860Cucurbita maxima (Rimu)cmacmaB324