CSPI05G18220 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATTTTTATTTCAAAGTTTCTTTTCACTCCTTCATTTTCCCCCCTCATTTCCCTCCTAAATTTCCTTTCCTCTCTTTTTTCAATTTTCACCTCCTCTCTTTTTTCATCCTTTCTCTCTTCTTTTAAATGGGATTCTCCAAAAAATCTCAAATCGACACCGGATTTGAACCCGAACCAAAAAAATGGGTAATCGCCGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGACGACGGAGACAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTTAATCCTTCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAGAAGGCCCAATTTGGTTTGTCATAGTTGAGAATTTAGGGGTTTCTCTGTTTTTTTCCTTTTTTTTTTTCTTTTTCTTTTTGGGGTGTTTGTTTAATTTTTCTTTTTTTGGGGGGGTTTTCTTTAATATTATTATTTTTTTATGTACTTGGTTAGTTATTAGGAGTAAGGTGATTATGATGTATAAAGGATTTCATATTTG ATGGGATTCTCCAAAAAATCTCAAATCGACACCGGATTTGAACCCGAACCAAAAAAATGGGTAATCGCCGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGACGACGGAGACAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTTAATCCTTCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAG ATGGGATTCTCCAAAAAATCTCAAATCGACACCGGATTTGAACCCGAACCAAAAAAATGGGTAATCGCCGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGACGACGGAGACAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTTAATCCTTCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAG
BLAST of CSPI05G18220 vs. TrEMBL
Match: A0A0A0KUE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523070 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 6.6e-49 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1
BLAST of CSPI05G18220 vs. TrEMBL
Match: A0A067LD61_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10261 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.3e-25 Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 1
BLAST of CSPI05G18220 vs. TrEMBL
Match: B9IJK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s10610g PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 8.7e-25 Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 1
BLAST of CSPI05G18220 vs. TrEMBL
Match: M5XAI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020389mg PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.5e-24 Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 1
BLAST of CSPI05G18220 vs. TrEMBL
Match: W9SPZ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020561 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.9e-24 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1
BLAST of CSPI05G18220 vs. TAIR10
Match: AT5G40460.1 (AT5G40460.1 unknown protein) HSP 1 Score: 97.8 bits (242), Expect = 4.0e-21 Identity = 60/113 (53.10%), Postives = 72/113 (63.72%), Query Frame = 1
BLAST of CSPI05G18220 vs. TAIR10
Match: AT1G60783.1 (AT1G60783.1 unknown protein) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12 Identity = 49/107 (45.79%), Postives = 61/107 (57.01%), Query Frame = 1
BLAST of CSPI05G18220 vs. TAIR10
Match: AT3G27630.1 (AT3G27630.1 unknown protein) HSP 1 Score: 68.2 bits (165), Expect = 3.4e-12 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 1
BLAST of CSPI05G18220 vs. TAIR10
Match: AT1G10690.1 (AT1G10690.1 unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 6.4e-11 Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 1
BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|449450076|ref|XP_004142790.1| (PREDICTED: uncharacterized protein LOC101222088 [Cucumis sativus]) HSP 1 Score: 201.1 bits (510), Expect = 9.5e-49 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1
BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|659117810|ref|XP_008458799.1| (PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45 Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 1
BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|802539655|ref|XP_012072102.1| (PREDICTED: uncharacterized protein LOC105633985 [Jatropha curcas]) HSP 1 Score: 122.9 bits (307), Expect = 3.3e-25 Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 1
BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|224141267|ref|XP_002323996.1| (hypothetical protein POPTR_0017s10610g [Populus trichocarpa]) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24 Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 1
BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|743939374|ref|XP_011014136.1| (PREDICTED: uncharacterized protein LOC105117996 [Populus euphratica]) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |