CSPI05G18220 (gene) Wild cucumber (PI 183967)

NameCSPI05G18220
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBnaA04g10310D protein
LocationChr5 : 19306935 .. 19307563 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTTTTATTTCAAAGTTTCTTTTCACTCCTTCATTTTCCCCCCTCATTTCCCTCCTAAATTTCCTTTCCTCTCTTTTTTCAATTTTCACCTCCTCTCTTTTTTCATCCTTTCTCTCTTCTTTTAAATGGGATTCTCCAAAAAATCTCAAATCGACACCGGATTTGAACCCGAACCAAAAAAATGGGTAATCGCCGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGACGACGGAGACAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTTAATCCTTCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAGAAGGCCCAATTTGGTTTGTCATAGTTGAGAATTTAGGGGTTTCTCTGTTTTTTTCCTTTTTTTTTTTCTTTTTCTTTTTGGGGTGTTTGTTTAATTTTTCTTTTTTTGGGGGGGTTTTCTTTAATATTATTATTTTTTTATGTACTTGGTTAGTTATTAGGAGTAAGGTGATTATGATGTATAAAGGATTTCATATTTG

mRNA sequence

ATGGGATTCTCCAAAAAATCTCAAATCGACACCGGATTTGAACCCGAACCAAAAAAATGGGTAATCGCCGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGACGACGGAGACAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTTAATCCTTCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAG

Coding sequence (CDS)

ATGGGATTCTCCAAAAAATCTCAAATCGACACCGGATTTGAACCCGAACCAAAAAAATGGGTAATCGCCGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGACGACGGAGACAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTTAATCCTTCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAG
BLAST of CSPI05G18220 vs. TrEMBL
Match: A0A0A0KUE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523070 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 6.6e-49
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60
           MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNP DLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

BLAST of CSPI05G18220 vs. TrEMBL
Match: A0A067LD61_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10261 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-25
Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTK---EGEDDGDK---TPTGK 60
           MGFSKK+Q+D+  + E KKWVIAG++ R+SLKPINTK + K   E ED+ ++   TPT K
Sbjct: 1   MGFSKKAQVDSSLDSEGKKWVIAGIAIRTSLKPINTKPRGKDIGEAEDEEEECSTTPTAK 60

Query: 61  EARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           EARIPE+L CPPAPRKRR +   +  N +REFFNP DLESVFK  V
Sbjct: 61  EARIPERLPCPPAPRKRRPVSRCNYNNSVREFFNPPDLESVFKCYV 106

BLAST of CSPI05G18220 vs. TrEMBL
Match: B9IJK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s10610g PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-25
Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK---TPTGKEAR 60
           MGFSKK+Q+D+G + E KKWVIAG++ R+SLKP+NTKS+ K+ + D ++   TPT KEAR
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPVNTKSRVKDCDGDEEEFSTTPTAKEAR 60

Query: 61  IPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           IPE+L CPPAPRKRR   S  N + +REFF P DLE+VFK  V
Sbjct: 61  IPERLPCPPAPRKRRP-SSRCNYSGVREFFTPPDLETVFKCYV 102

BLAST of CSPI05G18220 vs. TrEMBL
Match: M5XAI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020389mg PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-24
Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEG-----EDDGDKTPTGKE 60
           MGFSKKSQ+D G E E KKWVIAG+S R+SLKPINTK + KE      E+    TPT KE
Sbjct: 1   MGFSKKSQVDGGLESEGKKWVIAGISVRTSLKPINTKLRAKESEAGEEEEASSTTPTAKE 60

Query: 61  ARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           ARIPE   CPPAPRK R   S  N N +REFF P DL+SVFKL V
Sbjct: 61  ARIPEIFSCPPAPRKSRP-PSRCNFNGVREFFTPPDLDSVFKLHV 104

BLAST of CSPI05G18220 vs. TrEMBL
Match: W9SPZ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020561 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-24
Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK-----TPTGKE 60
           MGFSKKSQID G E E +KWVIAG+S RSSLKPINTK + K+ E+D ++     TPT KE
Sbjct: 1   MGFSKKSQIDGGLESEGRKWVIAGISVRSSLKPINTKPRGKDIEEDDNEESCSTTPTEKE 60

Query: 61  ARIPEKLGCPPAPRKRR-SLKSSSNQ-NHMREFFNPSDLESVF 97
           ARIPE+L CPPAPRKRR +L+ ++N  N +REFF P DLE+VF
Sbjct: 61  ARIPERLPCPPAPRKRRPALRCNNNSFNGVREFFTPPDLETVF 103

BLAST of CSPI05G18220 vs. TAIR10
Match: AT5G40460.1 (AT5G40460.1 unknown protein)

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-21
Identity = 60/113 (53.10%), Postives = 72/113 (63.72%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTK------------EGEDDGD 60
           MGFSKKSQ + G E + KKWVIAG+S R+SLKP+ TK +                E++  
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFN-PSDLESVFKLR 100
            TPT KE +IPE L CPPAPRKRR +LK  SN   +REFF  PSDLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNV--VREFFTPPSDLETVFLRR 111

BLAST of CSPI05G18220 vs. TAIR10
Match: AT1G60783.1 (AT1G60783.1 unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12
Identity = 49/107 (45.79%), Postives = 61/107 (57.01%), Query Frame = 1

Query: 1   MGFSKKS--QIDTGFEP--EPKKWVIAGLSARSSLKPINTKSKTKEGEDDGD---KTPTG 60
           MGFS K+  Q D  F    E KK VI G+S  S++KPI+  S      +D D    TPT 
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTA 60

Query: 61  KEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPSDLESVFKLR 100
              RIP  + CPPAP+KR+ +LK S      REFF+P DLE+VF  R
Sbjct: 61  DSVRIPTVIPCPPAPKKRKLTLKVSYGP---REFFSPPDLETVFIYR 104

BLAST of CSPI05G18220 vs. TAIR10
Match: AT3G27630.1 (AT3G27630.1 unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.4e-12
Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 1

Query: 1  MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTK--SKTKEGEDDGDKTPTGKEARI 60
          MG SKKSQ+    + + KK++ A  S R+SLKP+ TK     +E ED    TPT + A+ 
Sbjct: 1  MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERESEDGICITPTARGAKT 60

Query: 61 PEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVF 97
          PE   CP APRKR  +    N   +  F  PSD E VF
Sbjct: 61 PE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

BLAST of CSPI05G18220 vs. TAIR10
Match: AT1G10690.1 (AT1G10690.1 unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 6.4e-11
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 1

Query: 1   MGFSKKS--QIDTGFEP--EPKKWVIAGLSARSSLKPIN-----TKSKTKEGEDDGDKTP 60
           MG+S K   Q+D       + KKWVIAG+ +RS LK IN     T ++T+E +D    TP
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEE-QDQCPTTP 60

Query: 61  TGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVF 97
           T    RIP    CP AP+KR+     S     R++F+P DLE+VF
Sbjct: 61  TAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|449450076|ref|XP_004142790.1| (PREDICTED: uncharacterized protein LOC101222088 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 9.5e-49
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60
           MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNP DLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|659117810|ref|XP_008458799.1| (PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60
           MGFSKKSQID+GFE E KKWVIAGLSARSSLKPINTKSKTKEGE+DG+KTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNP DLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|802539655|ref|XP_012072102.1| (PREDICTED: uncharacterized protein LOC105633985 [Jatropha curcas])

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-25
Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTK---EGEDDGDK---TPTGK 60
           MGFSKK+Q+D+  + E KKWVIAG++ R+SLKPINTK + K   E ED+ ++   TPT K
Sbjct: 1   MGFSKKAQVDSSLDSEGKKWVIAGIAIRTSLKPINTKPRGKDIGEAEDEEEECSTTPTAK 60

Query: 61  EARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           EARIPE+L CPPAPRKRR +   +  N +REFFNP DLESVFK  V
Sbjct: 61  EARIPERLPCPPAPRKRRPVSRCNYNNSVREFFNPPDLESVFKCYV 106

BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|224141267|ref|XP_002323996.1| (hypothetical protein POPTR_0017s10610g [Populus trichocarpa])

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK---TPTGKEAR 60
           MGFSKK+Q+D+G + E KKWVIAG++ R+SLKP+NTKS+ K+ + D ++   TPT KEAR
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPVNTKSRVKDCDGDEEEFSTTPTAKEAR 60

Query: 61  IPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           IPE+L CPPAPRKRR   S  N + +REFF P DLE+VFK  V
Sbjct: 61  IPERLPCPPAPRKRRP-SSRCNYSGVREFFTPPDLETVFKCYV 102

BLAST of CSPI05G18220 vs. NCBI nr
Match: gi|743939374|ref|XP_011014136.1| (PREDICTED: uncharacterized protein LOC105117996 [Populus euphratica])

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24
Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1

Query: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDK----TPTGKEA 60
           MGFSKK+Q+D+G + E KKWVIAG++ R+SLKP+NTKS+ K+ + D ++    TPT KEA
Sbjct: 1   MGFSKKTQVDSGLDSEGKKWVIAGIAIRTSLKPVNTKSRVKDCDGDEEEEFSTTPTAKEA 60

Query: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPSDLESVFKLRV 101
           RIPE+L CPPAPRKRR   S  N + +REFF P DLE+VFK  V
Sbjct: 61  RIPERLPCPPAPRKRRP-SSRCNYSGVREFFTPPDLETVFKCYV 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KUE2_CUCSA6.6e-4999.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523070 PE=4 SV=1[more]
A0A067LD61_JATCU2.3e-2560.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10261 PE=4 SV=1[more]
B9IJK6_POPTR8.7e-2560.19Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s10610g PE=4 SV=1[more]
M5XAI6_PRUPE1.5e-2462.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020389mg PE=4 SV=1[more]
W9SPZ1_9ROSA1.9e-2464.08Uncharacterized protein OS=Morus notabilis GN=L484_020561 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G40460.14.0e-2153.10 unknown protein[more]
AT1G60783.11.2e-1245.79 unknown protein[more]
AT3G27630.13.4e-1242.86 unknown protein[more]
AT1G10690.16.4e-1141.90 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449450076|ref|XP_004142790.1|9.5e-4999.00PREDICTED: uncharacterized protein LOC101222088 [Cucumis sativus][more]
gi|659117810|ref|XP_008458799.1|1.7e-4594.00PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo][more]
gi|802539655|ref|XP_012072102.1|3.3e-2560.38PREDICTED: uncharacterized protein LOC105633985 [Jatropha curcas][more]
gi|224141267|ref|XP_002323996.1|1.2e-2460.19hypothetical protein POPTR_0017s10610g [Populus trichocarpa][more]
gi|743939374|ref|XP_011014136.1|1.6e-2459.62PREDICTED: uncharacterized protein LOC105117996 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G18220.1CSPI05G18220.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 1..100
score: 1.4
NoneNo IPR availablePANTHERPTHR33142:SF9CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR2-RELATEDcoord: 1..100
score: 1.4

The following gene(s) are paralogous to this gene:

None