CmaCh15G001530 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G001530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transcription factor bHLH61-like protein
Location	Cma_Chr15 : 716865 .. 718795 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAGCTAGCCAACACAAGTTGGTATAGATTTGAGGCCTCACCATGCCTTTATAAAAACACACACAAGAAAAAGAAACATATAACACACAAACAAAAAGGCTACAATCCATCCATGGTTTCTAGAGAGCACAACAACGCAGCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTGTAATTTCCCTCTCTTTTCTCTTCATTTTGTTCATCGCGTTCTTCGTGTTCTTCGTGTTCTTTGATTCGATTCTCAATTCATTCATAAAAAGTTATGATTTTTATGTGTGTAGCAGCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGGTATTTTCTTCAATCAACAACAACTTTTTCACTTAAATTATTCAAGAACAACCAAAAAAAAACATACCCATTTGTTGATTATAGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGATATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAGTAAGATACTACAAGCACCCATCTTTCTATAATTATGCATATAAATCATCATCATTATAAAAACATATATTTATTATTATTATTCCATGGTCAAGAAAGTCAAATCAATCATTCATTTTAACAAGAATATTTACCTAAAGTAATGGAATTTTCCATCTAATCATACACTTCAATGTCGGGTTTTTTTTTTTTTTTTTTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTAATATATGATATTAAATTTAATGTGTGGATTAAAATGGGTGTTTGTAATTTTATAGATTGAGGAAGAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTCAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAAAAACATCCTTAATTTCTCCAACTTGTTCCAATTGCGGCTGTTTTTTTTGGTTTTGTTCTTACCTGTCTGTGATTGTAATGCAGTAAAAAGTAATCAATGGAACAACCGATTGCTTAATCTAAAATATTGATATGAACATGGTAACTCCCACTATAAGATTCATGCGCATGGTTTGTTGAAAATCATGAAAGGTGTCATTTTTGGAGATGAAGTACGAAAAGGAACCATTTTTGTTATGCTTTTTGGTTTTGGGTTTGTAAAGGTGGGAGCTTTTTCATCATTATAGAACTGATATCATTTCATCATTAAAGGGTACGTAGAAATAAAGAAAGAAAGAAAGGC

mRNA sequence

AGGAAGCTAGCCAACACAAGTTGGTATAGATTTGAGGCCTCACCATGCCTTTATAAAAACACACACAAGAAAAAGAAACATATAACACACAAACAAAAAGGCTACAATCCATCCATGGTTTCTAGAGAGCACAACAACGCAGCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGATATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAATTGAGGAAGAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTCAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAAAAACATCCTTAATTTCTCCAACTTGTTCCAATTGCGGCTGTTTTTTTTGGTTTTGTTCTTACCTGTCTGTGATTGTAATGCAGTAAAAAGTAATCAATGGAACAACCGATTGCTTAATCTAAAATATTGATATGAACATGGTAACTCCCACTATAAGATTCATGCGCATGGTTTGTTGAAAATCATGAAAGGTGTCATTTTTGGAGATGAAGTACGAAAAGGAACCATTTTTGTTATGCTTTTTGGTTTTGGGTTTGTAAAGGTGGGAGCTTTTTCATCATTATAGAACTGATATCATTTCATCATTAAAGGGTACGTAGAAATAAAGAAAGAAAGAAAGGC

Coding sequence (CDS)

ATGGTTTCTAGAGAGCACAACAACGCAGCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGATATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAATTGAGGAAGAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTCAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAA

Protein sequence

MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTSIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD

Homology

[Close]

BLAST of CmaCh15G001530 vs. TrEMBL
Match: A0A0A0K8N7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013900 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 9.7e-60
Identity = 134/160 (83.75%), Postives = 139/160 (86.88%), Query Frame = 1


Query: 1   MVSREHNNAA-LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  AA LH NLQLLRSITNSH+LNKASIIVDASKYIEELKQKVERLNQDISTVQ 
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQN 60

Query: 61  S------IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDS 120
           S        PMQVTVE + KGFSINVFSEKSCQGLLVSILE FEELGLNV+EARVSCT +
Sbjct: 61  SNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHT 120

Query: 121 FQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           FQLQAI EIEEEGEE IDAQ VKEAVVQAIK WSQ+GEQD
Sbjct: 121 FQLQAIGEIEEEGEEGIDAQTVKEAVVQAIKSWSQNGEQD 160

[Close]

BLAST of CmaCh15G001530 vs. TrEMBL
Match: A0A061EDD6_THECC (Transcription factor bHLH61 isoform 2 OS=Theobroma cacao GN=TCM_017056 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.1e-53
Identity = 120/156 (76.92%), Postives = 130/156 (83.33%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREH  AALH  LQLLRSITNSHALNK SIIVDASKYIEELKQKVERLN+DI+  QTS
Sbjct: 1   MVSREHKRAALHEKLQLLRSITNSHALNKTSIIVDASKYIEELKQKVERLNEDIAAAQTS 60

Query: 61  IH----PMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQL 120
            H    P+QVTVE+L KGF INV SEKSC GLLVSILEAFEELGLNVLEARVSCTDSF+L
Sbjct: 61  NHQNPLPVQVTVETLEKGFLINVLSEKSCPGLLVSILEAFEELGLNVLEARVSCTDSFRL 120

Query: 121 QAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQ 153
           QA+    EE  E IDAQ VK+AV+QAIK WS+S +Q
Sbjct: 121 QAVGGENEEQSETIDAQVVKQAVLQAIKNWSESTDQ 156

[Close]

BLAST of CmaCh15G001530 vs. TrEMBL
Match: A0A0B0PH75_GOSAR (Transcription factor bHLH61-like protein OS=Gossypium arboreum GN=F383_31786 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.7e-52
Identity = 115/156 (73.72%), Postives = 130/156 (83.33%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREH  A LH  LQLLRSITNSHA+NKASIIVDASKYIEELKQKVERLNQDI+  QTS
Sbjct: 1   MVSREHKRAGLHEKLQLLRSITNSHAMNKASIIVDASKYIEELKQKVERLNQDITAAQTS 60

Query: 61  IH----PMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQL 120
            +    PMQVTVE+L KGF IN+FSEKSC GLLVS+LEAF++LGLNVLEARVSCTDSF+ 
Sbjct: 61  NNRNPLPMQVTVETLEKGFLINIFSEKSCPGLLVSVLEAFQDLGLNVLEARVSCTDSFRF 120

Query: 121 QAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQ 153
           QA+    EE  E IDAQ VK+AV+QAIK WS+S ++
Sbjct: 121 QAVGGENEEQSEYIDAQVVKQAVLQAIKNWSESSDE 156

[Close]

BLAST of CmaCh15G001530 vs. TrEMBL
Match: A0A0D2RUN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G037400 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51
Identity = 117/156 (75.00%), Postives = 129/156 (82.69%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREH  AALH  LQLLRSITNSHA+NK +IIVDASKYIEELKQKVERLNQ IS  QTS
Sbjct: 1   MVSREHKRAALHEKLQLLRSITNSHAVNKTTIIVDASKYIEELKQKVERLNQGISAAQTS 60

Query: 61  IH----PMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQL 120
                 PMQVTVE+L KGF INVFSEKSC GLLVS+LEAFEELGLN+LEARVSCTDSF+L
Sbjct: 61  NDQNPLPMQVTVETLEKGFLINVFSEKSCPGLLVSLLEAFEELGLNILEARVSCTDSFRL 120

Query: 121 QAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQ 153
           QA+    EE  E+IDAQ VK+AV+QAIK WS+  +Q
Sbjct: 121 QAVGGENEEQSESIDAQVVKQAVLQAIKNWSEGTDQ 156

[Close]

BLAST of CmaCh15G001530 vs. TrEMBL
Match: A0A061EDZ5_THECC (Transcription factor bHLH61 isoform 1 OS=Theobroma cacao GN=TCM_017056 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-51
Identity = 119/155 (76.77%), Postives = 129/155 (83.23%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSREH  AALH  LQLLRSITNSHALNK SIIVDASKYIEELKQKVERLN+DI+  QTS
Sbjct: 1   MVSREHKRAALHEKLQLLRSITNSHALNKTSIIVDASKYIEELKQKVERLNEDIAAAQTS 60

Query: 61  IH--PMQV-TVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQ 120
            H  P+ V TVE+L KGF INV SEKSC GLLVSILEAFEELGLNVLEARVSCTDSF+LQ
Sbjct: 61  NHQNPLPVVTVETLEKGFLINVLSEKSCPGLLVSILEAFEELGLNVLEARVSCTDSFRLQ 120

Query: 121 AIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQ 153
           A+    EE  E IDAQ VK+AV+QAIK WS+S +Q
Sbjct: 121 AVGGENEEQSETIDAQVVKQAVLQAIKNWSESTDQ 155

[Close]

BLAST of CmaCh15G001530 vs. TAIR10
Match: AT2G40435.1 (AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1))

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-39
Identity = 92/153 (60.13%), Postives = 111/153 (72.55%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQTS 60
           MVSRE    +L    QLLRSITNSHA N  SII+DASKYI++LKQKVER NQD +  Q+S
Sbjct: 1   MVSREQKRGSLQEKFQLLRSITNSHAENDTSIIMDASKYIQKLKQKVERFNQDPTAEQSS 60

Query: 61  IHPMQ-----VTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQ 120
             P       VTVE+L KGF INVFS K+  G+LVS+LEAFE++GLNVLEAR SCTDSF 
Sbjct: 61  SEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFS 120

Query: 121 LQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQ 149
           L A+  +E E  E +DA+AVK+AV  AI+ W +
Sbjct: 121 LHAMG-LENEDGENMDAEAVKQAVTDAIRSWGE 152

[Close]

BLAST of CmaCh15G001530 vs. TAIR10
Match: AT3G56220.1 (AT3G56220.1 transcription regulators)

HSP 1 Score: 142.1 bits (357), Expect = 2.8e-34
Identity = 84/155 (54.19%), Postives = 111/155 (71.61%), Query Frame = 1


Query: 1   MVSREHNN-AALHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH   ++L     LLRSIT+SHA ++ SIIVDASKYI++LKQKVE++N   ++ Q+
Sbjct: 1   MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQS 60

Query: 61  -----SIHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSF 120
                  +PM VTVE+L KGF I V S K+  G+LV +LE FE+LGL+V+EARVSCTD+F
Sbjct: 61  FRESSDPNPM-VTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDTF 120

Query: 121 QLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQS 150
            L AI     +  + IDA+AVK+AV +AI+ WS S
Sbjct: 121 SLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDS 154

[Close]

BLAST of CmaCh15G001530 vs. TAIR10
Match: AT1G29270.1 (AT1G29270.1 unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 9.7e-11
Identity = 45/126 (35.71%), Postives = 75/126 (59.52%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITN-SHALNKASIIV-DASKYIEELKQKVERLNQDIS--- 60
           MV+ E    A       L+++T+   ++++ S+++ +A  YI  LK ++E L ++     
Sbjct: 1   MVASEQKKRASQGKPHFLKNLTHFKFSIHEQSMVIREALLYIAMLKLEIEALQREYEDLK 60

Query: 61  -TVQTSIHPMQ-VTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDS 120
            T + S+H  Q V VE + + F + + S +  +  LV+ILEAFEE+GLNV +AR SC DS
Sbjct: 61  ITKKESLHQFQEVKVEKIGEMFQVKIKSPRG-ENNLVNILEAFEEMGLNVAQARASCLDS 120

[Close]

BLAST of CmaCh15G001530 vs. TAIR10
Match: AT5G10570.1 (AT5G10570.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.2e-06
Identity = 41/154 (26.62%), Postives = 74/154 (48.05%), Query Frame = 1


Query: 1   MVSREHNNAALHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           +++       L+  L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D   + +
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  SIH-PMQVTVESLAKGF--------SINVFSEKSCQ---GLLVSILEAFEELGLNVLEAR 120
           + H    +T ES+ +           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQAIAEIEEEGEEAIDAQAVKEAVVQ 142
           +SC   F LQA      E    + ++A K+A+++
Sbjct: 273 ISCFSDFSLQASCFEVGEQRYMVTSEATKQALIR 306

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: gi|778709618|ref|XP_011656425.1| (PREDICTED: uncharacterized protein LOC101218918 isoform X2 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 134/160 (83.75%), Postives = 139/160 (86.88%), Query Frame = 1


Query: 1   MVSREHNNAA-LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  AA LH NLQLLRSITNSH+LNKASIIVDASKYIEELKQKVERLNQDISTVQ 
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQN 60

Query: 61  S------IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDS 120
           S        PMQVTVE + KGFSINVFSEKSCQGLLVSILE FEELGLNV+EARVSCT +
Sbjct: 61  SNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHT 120

Query: 121 FQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           FQLQAI EIEEEGEE IDAQ VKEAVVQAIK WSQ+GEQD
Sbjct: 121 FQLQAIGEIEEEGEEGIDAQTVKEAVVQAIKSWSQNGEQD 160

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: gi|778709614|ref|XP_011656424.1| (PREDICTED: uncharacterized protein LOC101218918 isoform X1 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 3.4e-58
Identity = 134/161 (83.23%), Postives = 139/161 (86.34%), Query Frame = 1


Query: 1   MVSREHNNAA-LHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQ 60
           MVSREH  AA LH NLQLLRSITNSH+ LNKASIIVDASKYIEELKQKVERLNQDISTVQ
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSHSQLNKASIIVDASKYIEELKQKVERLNQDISTVQ 60

Query: 61  TS------IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTD 120
            S        PMQVTVE + KGFSINVFSEKSCQGLLVSILE FEELGLNV+EARVSCT 
Sbjct: 61  NSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTH 120

Query: 121 SFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           +FQLQAI EIEEEGEE IDAQ VKEAVVQAIK WSQ+GEQD
Sbjct: 121 TFQLQAIGEIEEEGEEGIDAQTVKEAVVQAIKSWSQNGEQD 161

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: gi|449441264|ref|XP_004138402.1| (PREDICTED: uncharacterized protein LOC101218918 isoform X4 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 133/160 (83.12%), Postives = 138/160 (86.25%), Query Frame = 1


Query: 1   MVSREHNNAA-LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  AA LH NLQLLRSITNSH+LNKASIIVDASKYIEELKQKVERLNQDISTVQ 
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQN 60

Query: 61  S------IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDS 120
           S        PM VTVE + KGFSINVFSEKSCQGLLVSILE FEELGLNV+EARVSCT +
Sbjct: 61  SNPLSHQYSPM-VTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHT 120

Query: 121 FQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           FQLQAI EIEEEGEE IDAQ VKEAVVQAIK WSQ+GEQD
Sbjct: 121 FQLQAIGEIEEEGEEGIDAQTVKEAVVQAIKSWSQNGEQD 159

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: gi|778709622|ref|XP_011656426.1| (PREDICTED: uncharacterized protein LOC101218918 isoform X3 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-56
Identity = 133/161 (82.61%), Postives = 138/161 (85.71%), Query Frame = 1


Query: 1   MVSREHNNAA-LHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQ 60
           MVSREH  AA LH NLQLLRSITNSH+ LNKASIIVDASKYIEELKQKVERLNQDISTVQ
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSHSQLNKASIIVDASKYIEELKQKVERLNQDISTVQ 60

Query: 61  TS------IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTD 120
            S        PM VTVE + KGFSINVFSEKSCQGLLVSILE FEELGLNV+EARVSCT 
Sbjct: 61  NSNPLSHQYSPM-VTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTH 120

Query: 121 SFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           +FQLQAI EIEEEGEE IDAQ VKEAVVQAIK WSQ+GEQD
Sbjct: 121 TFQLQAIGEIEEEGEEGIDAQTVKEAVVQAIKSWSQNGEQD 160

[Close]

BLAST of CmaCh15G001530 vs. NCBI nr
Match: gi|659113787|ref|XP_008456755.1| (PREDICTED: transcription factor bHLH93 [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55
Identity = 133/160 (83.12%), Postives = 137/160 (85.62%), Query Frame = 1


Query: 1   MVSREHNNAA-LHHNLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  AA LH NLQLLRSITNS  LNKASIIVDASKYIEELKQKVERLNQDISTVQ 
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSQ-LNKASIIVDASKYIEELKQKVERLNQDISTVQN 60

Query: 61  S------IHPMQVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDS 120
           S        PM VTVE + KGFSINVFSEKSCQGLLVSILE FEELGLNV+EARVSCT +
Sbjct: 61  SNPLSHQYSPM-VTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHT 120

Query: 121 FQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 154
           FQLQAI EIEEEGEEAIDAQ VKEAVVQAIK WSQ+GEQD
Sbjct: 121 FQLQAIGEIEEEGEEAIDAQTVKEAVVQAIKSWSQNGEQD 158

The following BLAST results are available for this feature:

BLAST of CmaCh15G001530 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh15G001530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8N7_CUCSA	9.7e-60	83.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013900 PE=4 SV=1	[more]
A0A061EDD6_THECC	5.1e-53	76.92	Transcription factor bHLH61 isoform 2 OS=Theobroma cacao GN=TCM_017056 PE=4 SV=1	[more]
A0A0B0PH75_GOSAR	9.7e-52	73.72	Transcription factor bHLH61-like protein OS=Gossypium arboreum GN=F383_31786 PE=...	[more]
A0A0D2RUN0_GOSRA	1.3e-51	75.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G037400 PE=4 SV=1	[more]
A0A061EDZ5_THECC	2.8e-51	76.77	Transcription factor bHLH61 isoform 1 OS=Theobroma cacao GN=TCM_017056 PE=4 SV=1	[more]

BLAST of CmaCh15G001530 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40435.1	1.3e-39	60.13	BEST Arabidopsis thaliana protein match is: transcription regulators...	[more]
AT3G56220.1	2.8e-34	54.19	transcription regulators	[more]
AT1G29270.1	9.7e-11	35.71	unknown protein	[more]
AT5G10570.1	4.2e-06	26.62	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh15G001530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778709618\|ref\|XP_011656425.1\|	1.4e-59	83.75	PREDICTED: uncharacterized protein LOC101218918 isoform X2 [Cucumis sativus]	[more]
gi\|778709614\|ref\|XP_011656424.1\|	3.4e-58	83.23	PREDICTED: uncharacterized protein LOC101218918 isoform X1 [Cucumis sativus]	[more]
gi\|449441264\|ref\|XP_004138402.1\|	1.3e-57	83.13	PREDICTED: uncharacterized protein LOC101218918 isoform X4 [Cucumis sativus]	[more]
gi\|778709622\|ref\|XP_011656426.1\|	3.2e-56	82.61	PREDICTED: uncharacterized protein LOC101218918 isoform X3 [Cucumis sativus]	[more]
gi\|659113787\|ref\|XP_008456755.1\|	1.2e-55	83.13	PREDICTED: transcription factor bHLH93 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001530.1	CmaCh15G001530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 23..60 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 15..69 score: 1.7
None	No IPR available	unknown	Coil	Coil	coord: 33..60 scor
None	No IPR available	PANTHER	PTHR31945	FAMILY NOT NAMED	coord: 1..153 score: 2.1
None	No IPR available	PANTHER	PTHR31945:SF21	SUBFAMILY NOT NAMED	coord: 1..153 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G001530	Cucsa.326150	Cucumber (Gy14) v1	cgycmaB0903
CmaCh15G001530	Cucsa.130380	Cucumber (Gy14) v1	cgycmaB0353
CmaCh15G001530	Cla006617	Watermelon (97103) v1	cmawmB283
CmaCh15G001530	Csa6G013900	Cucumber (Chinese Long) v2	cmacuB309
CmaCh15G001530	MELO3C019989	Melon (DHL92) v3.5.1	cmameB272
CmaCh15G001530	ClCG11G005870	Watermelon (Charleston Gray)	cmawcgB252
CmaCh15G001530	CSPI06G01980	Wild cucumber (PI 183967)	cmacpiB314
CmaCh15G001530	CmoCh04G030040	Cucurbita moschata (Rifu)	cmacmoB308
CmaCh15G001530	CmoCh03G003200	Cucurbita moschata (Rifu)	cmacmoB300
CmaCh15G001530	Lsi03G002800	Bottle gourd (USVL1VR-Ls)	cmalsiB276
CmaCh15G001530	Lsi01G016000	Bottle gourd (USVL1VR-Ls)	cmalsiB270
CmaCh15G001530	Cp4.1LG01g21760	Cucurbita pepo (Zucchini)	cmacpeB317
CmaCh15G001530	Cp4.1LG10g07670	Cucurbita pepo (Zucchini)	cmacpeB302
CmaCh15G001530	Cp4.1LG13g07390	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G001530	MELO3C019989.2	Melon (DHL92) v3.6.1	cmamedB312
CmaCh15G001530	MELO3C026050.2	Melon (DHL92) v3.6.1	cmamedB324
CmaCh15G001530	CsaV3_4G027000	Cucumber (Chinese Long) v3	cmacucB0339
CmaCh15G001530	CsaV3_6G002130	Cucumber (Chinese Long) v3	cmacucB0363
CmaCh15G001530	Cla97C04G073120	Watermelon (97103) v2	cmawmbB303
CmaCh15G001530	Cla97C11G212780	Watermelon (97103) v2	cmawmbB296
CmaCh15G001530	Bhi03G001744	Wax gourd	cmawgoB0402
CmaCh15G001530	Bhi04G001855	Wax gourd	cmawgoB0397
CmaCh15G001530	CsGy4G015710	Cucumber (Gy14) v2	cgybcmaB490
CmaCh15G001530	CsGy6G002060	Cucumber (Gy14) v2	cgybcmaB741
CmaCh15G001530	Carg05951	Silver-seed gourd	carcmaB0030
CmaCh15G001530	Carg02145	Silver-seed gourd	carcmaB0362

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G001530	CmaCh04G028770	Cucurbita maxima (Rimu)	cmacmaB324

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G001530	Cucumber (Chinese Long) v3	cmacucB0350
CmaCh15G001530	Watermelon (97103) v2	cmawmbB315
CmaCh15G001530	Cucurbita maxima (Rimu)	cmacmaB326
CmaCh15G001530	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G001530	Cucurbita moschata (Rifu)	cmacmoB315
CmaCh15G001530	Cucurbita pepo (Zucchini)	cmacpeB320
CmaCh15G001530	Bottle gourd (USVL1VR-Ls)	cmalsiB285
CmaCh15G001530	Silver-seed gourd	carcmaB0943