Carg02145 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02145
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor bHLH61-like protein
Location	Cucurbita_argyrosperma_scaffold_007 : 273634 .. 274774 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAATTCAAATCATGTCTTATATATATATATATATATGGTTGTAGAGGAAGCTAGCCAACACAAGTTGGTATAGATTTGAGGCCTCACCATGCCCTTATAAAAACACACACAAGAAAAAGAAACATATAACACACAAACAAAAAAGCTACAATCCATCCATGGTTTCTAGAGAGCACAACAACGCATCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTGTAATTTCCCTCTCTTTTCTCTTCATTTTGTTCATTGCGTTCTTCGCGTTCTTCGTGTTCTTCGTGTTCTTCGATTCGATTCTCAATTCATTCATAAAAAGTTATGATTTTTATGTGTGTAGCAGCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGGTATTTTCTTCAATCAACAACAACTTTTTCCCTTGAATTATTCAAGAACAACCAAAAAAAAACATACCCATTTGTTCATTCTAGCAGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGGTATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAGTAAGATACTCCAAGCATCCATCTTTCTATAATTATGCATATAAATCATCATCATTATAAAAACATATATTTATTATTATTATTCCATGGTCAATAAAGTCAAATCAATCATTCATTTTAACAAGAATATTTACCTAAAGTAATGGAATTTTCCATCTAATCATACATTTCAATGTCGGGTTTTTTTTTTTTTTTTTTTTTAATATATGATATTCAATTTAATGTGTGGATTAAAATGGGTGTTTGTAATTTTATAGATTGAGGAACAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTGAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAAAAACATCCTTAATTTCTCCAGCTTGTTCCAATTGCGGCTGTTTTTTTTTTTTT

mRNA sequence

TATAATTCAAATCATGTCTTATATATATATATATATATGGTTGTAGAGGAAGCTAGCCAACACAAGTTGGTATAGATTTGAGGCCTCACCATGCCCTTATAAAAACACACACAAGAAAAAGAAACATATAACACACAAACAAAAAAGCTACAATCCATCCATGGTTTCTAGAGAGCACAACAACGCATCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTCAGCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGGTATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAATTGAGGAACAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTGAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAAAAACATCCTTAATTTCTCCAGCTTGTTCCAATTGCGGCTGTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGTTTCTAGAGAGCACAACAACGCATCTCTTCATCACAACCTCCAATTACTTCGCTCTATTACCAATTCTCATGCTCAGCTCAACAAGGCCTCGATTATAGTGGATGCATCAAAATACATCGAGGAGCTTAAACAAAAAGTAGAAAGATTGAATCAAGATATCTCAACCGTTCAAACTTCAATCCATCCCATGGTGACAGTGGAAAGCCTAGCAAAGGGGTTTTCCATTAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTGCTCGTGTCGGTATTAGAAGCCTTTGAAGAGCTGGGGCTGAATGTTCTTGAAGCTAGGGTTTCTTGTACAGATAGTTTCCAATTACAAGCTATTGCAGAAATTGAGGAACAAGGAGAAGAAGCCATTGATGCTCAAGCTGTGAAAGAAGCAGTAGTTGAAGCTATAAAGATCTGGAGCCAAAGCGGTGAACAAGATTAA

Protein sequence

MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQTSIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD

Homology

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BLAST of Carg02145 vs. NCBI nr
Match: XP_023551078.1 (uncharacterized protein LOC111809011 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72
Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIA 120
           SIHPMVTVESLAKGFSINVFSEKSCQGLLVS+LEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           EIEEQGEEAIDAQAVKEAVV+AIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQAVKEAVVQAIKIWSQSGEQD 153

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BLAST of Carg02145 vs. NCBI nr
Match: XP_022939239.1 (uncharacterized protein LOC111445214 isoform X3 [Cucurbita moschata])

HSP 1 Score: 280.4 bits (716), Expect = 3.6e-72
Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIA 120
           SIHPMVTVESLAKGFSINVFSEKSCQGLLVS+LEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           EIEEQGEEAIDAQ+VKEAVV+AIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQSVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of Carg02145 vs. NCBI nr
Match: XP_022993986.1 (uncharacterized protein LOC111489817 isoform X3 [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 8.1e-72
Identity = 149/153 (97.39%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNA+LHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNAALHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIA 120
           SIHPMVTVESLAKGFSINVFSEKSCQGLLVS+LEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           EIEE+GEEAIDAQAVKEAVV+AIKIWSQSGEQD
Sbjct: 121 EIEEEGEEAIDAQAVKEAVVQAIKIWSQSGEQD 153

[Close]

BLAST of Carg02145 vs. NCBI nr
Match: XP_023551079.1 (uncharacterized protein LOC111809011 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNASLHHNLQLLRSITNSHA LNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIA 120
           SIHPMVTVESLAKGFSINVFSEKSCQGLLVS+LEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           EIEEQGEEAIDAQAVKEAVV+AIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQAVKEAVVQAIKIWSQSGEQD 152

[Close]

BLAST of Carg02145 vs. NCBI nr
Match: XP_022939241.1 (uncharacterized protein LOC111445214 isoform X4 [Cucurbita moschata])

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-70
Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREHNNASLHHNLQLLRSITNSHA LNKASIIVDASKYIEELKQKVERLNQDISTVQT
Sbjct: 1   MVSREHNNASLHHNLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQDISTVQT 60

Query: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIA 120
           SIHPMVTVESLAKGFSINVFSEKSCQGLLVS+LEAFEELGLNVLEARVSCTDSFQLQAIA
Sbjct: 61  SIHPMVTVESLAKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDSFQLQAIA 120

Query: 121 EIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           EIEEQGEEAIDAQ+VKEAVV+AIKIWSQSGEQD
Sbjct: 121 EIEEQGEEAIDAQSVKEAVVQAIKIWSQSGEQD 152

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BLAST of Carg02145 vs. TAIR10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1))

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 95/154 (61.69%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSRE    SL    QLLRSITNSHA+ N  SII+DASKYI++LKQKVER NQD +  Q+
Sbjct: 1   MVSREQKRGSLQEKFQLLRSITNSHAE-NDTSIIMDASKYIQKLKQKVERFNQDPTAEQS 60

Query: 61  SIH------PMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSF 120
           S        PMVTVE+L KGF INVFS K+  G+LVSVLEAFE++GLNVLEAR SCTDSF
Sbjct: 61  SSEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSF 120

Query: 121 QLQAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQ 149
            L A+    E GE  +DA+AVK+AV +AI+ W +
Sbjct: 121 SLHAMGLENEDGEN-MDAEAVKQAVTDAIRSWGE 152

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BLAST of Carg02145 vs. TAIR10
Match: AT3G56220.1 (transcription regulators)

HSP 1 Score: 145.2 bits (365), Expect = 3.3e-35
Identity = 87/155 (56.13%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MVSREH-NNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQ 60
           MVSREH   +SL     LLRSIT+SHA+ ++ SIIVDASKYI++LKQKVE++N   ++ Q
Sbjct: 1   MVSREHKRGSSLREKFHLLRSITDSHAE-SETSIIVDASKYIKKLKQKVEKINNATTSEQ 60

Query: 61  -----TSIHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSF 120
                +  +PMVTVE+L KGF I V S K+  G+LV VLE FE+LGL+V+EARVSCTD+F
Sbjct: 61  SFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDTF 120

Query: 121 QLQAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQS 150
            L AI        + IDA+AVK+AV EAI+ WS S
Sbjct: 121 SLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDS 154

[Close]

BLAST of Carg02145 vs. TAIR10
Match: AT1G29270.1 (unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.8e-10
Identity = 42/126 (33.33%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIV-DASKYIEELKQKVERLNQDIS--- 60
           MV+ E    +       L+++T+    +++ S+++ +A  YI  LK ++E L ++     
Sbjct: 1   MVASEQKKRASQGKPHFLKNLTHFKFSIHEQSMVIREALLYIAMLKLEIEALQREYEDLK 60

Query: 61  -TVQTSIHPM--VTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDS 120
            T + S+H    V VE + + F + + S +  +  LV++LEAFEE+GLNV +AR SC DS
Sbjct: 61  ITKKESLHQFQEVKVEKIGEMFQVKIKSPRG-ENNLVNILEAFEEMGLNVAQARASCLDS 120

[Close]

BLAST of Carg02145 vs. TAIR10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 43/154 (27.92%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           +++       L+  L LLRSI     ++++ SI+ DA  Y++EL  K+ +L +D   + +
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  SIH--PMVTVESLAKGF--------SINVFSEKSC---QGLLVSVLEAFEELGLNVLEAR 120
           + H   ++T ES+ +           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQAIA-EIEEQGEEAIDAQAVKEAVV 141
           +SC   F LQA   E+ EQ    + ++A K+A++
Sbjct: 273 ISCFSDFSLQASCFEVGEQ-RYMVTSEATKQALI 305

[Close]

BLAST of Carg02145 vs. TAIR10
Match: AT1G12860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 4.7e-05
Identity = 39/175 (22.29%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTV-- 60
           +++       L+  L +LRS+    +++++ASI+ DA  Y++EL Q++  L+ ++ +   
Sbjct: 269 LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTPP 328

Query: 61  -QTSIHPMV-TVESLA------------------------------KGFSINVFSEKSCQ 120
             +S+HP+  T ++L+                              K  +I++F  +   
Sbjct: 329 SSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRR-P 388

Query: 121 GLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIAEIEEQGEEAIDAQAVKEAVVE 142
           GLL+S + A + LGL+V +A +SC + F L      + Q +  +  + +K  +++
Sbjct: 389 GLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAVLLD 442

[Close]

BLAST of Carg02145 vs. Swiss-Prot
Match: sp|Q9LXA9|BH061_ARATH (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 43/154 (27.92%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           +++       L+  L LLRSI     ++++ SI+ DA  Y++EL  K+ +L +D   + +
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  SIH--PMVTVESLAKGF--------SINVFSEKSC---QGLLVSVLEAFEELGLNVLEAR 120
           + H   ++T ES+ +           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQAIA-EIEEQGEEAIDAQAVKEAVV 141
           +SC   F LQA   E+ EQ    + ++A K+A++
Sbjct: 273 ISCFSDFSLQASCFEVGEQ-RYMVTSEATKQALI 305

[Close]

BLAST of Carg02145 vs. Swiss-Prot
Match: sp|Q9LPW3|SCRM2_ARATH (Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.4e-04
Identity = 39/175 (22.29%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTV-- 60
           +++       L+  L +LRS+    +++++ASI+ DA  Y++EL Q++  L+ ++ +   
Sbjct: 269 LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTPP 328

Query: 61  -QTSIHPMV-TVESLA------------------------------KGFSINVFSEKSCQ 120
             +S+HP+  T ++L+                              K  +I++F  +   
Sbjct: 329 SSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRR-P 388

Query: 121 GLLVSVLEAFEELGLNVLEARVSCTDSFQLQAIAEIEEQGEEAIDAQAVKEAVVE 142
           GLL+S + A + LGL+V +A +SC + F L      + Q +  +  + +K  +++
Sbjct: 389 GLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAVLLD 442

[Close]

BLAST of Carg02145 vs. TrEMBL
Match: tr|A0A1S4E185|A0A1S4E185_CUCME (uncharacterized protein LOC103496601 OS=Cucumis melo OX=3656 GN=LOC103496601 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54
Identity = 128/160 (80.00%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 1   MVSREHNN-ASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQ 60
           MVSREH   A+LH NLQLLRSITNS    NKASIIVDASKYIEELKQKVERLNQDISTVQ
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNS-XXXNKASIIVDASKYIEELKQKVERLNQDISTVQ 60

Query: 61  TS------IHPMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDS 120
            S        PMVTVE + KGFSINVFSEKSCQGLLVS+LE FEELGLNV+EARVSCT +
Sbjct: 61  NSNPLSHQYSPMVTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHT 120

Query: 121 FQLQAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           FQLQAI EIEE+GEEAIDAQ VKEAVV+AIK WSQ+GEQD
Sbjct: 121 FQLQAIGEIEEEGEEAIDAQTVKEAVVQAIKSWSQNGEQD 159

[Close]

BLAST of Carg02145 vs. TrEMBL
Match: tr|A0A0A0K8N7|A0A0A0K8N7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G013900 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54
Identity = 129/161 (80.12%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MVSREHNN-ASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQ 60
           MVSREH   A+LH NLQLLRSITNSH+ LNKASIIVDASKYIEELKQKVERLNQDISTVQ
Sbjct: 1   MVSREHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQ 60

Query: 61  TS------IHPM-VTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTD 120
            S        PM VTVE + KGFSINVFSEKSCQGLLVS+LE FEELGLNV+EARVSCT 
Sbjct: 61  NSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTH 120

Query: 121 SFQLQAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQD 154
           +FQLQAI EIEE+GEE IDAQ VKEAVV+AIK WSQ+GEQD
Sbjct: 121 TFQLQAIGEIEEEGEEGIDAQTVKEAVVQAIKSWSQNGEQD 160

[Close]

BLAST of Carg02145 vs. TrEMBL
Match: tr|A0A061EDZ5|A0A061EDZ5_THECC (Transcription factor bHLH61 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_017056 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-49
Identity = 115/156 (73.72%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  A+LH  LQLLRSITNSHA LNK SIIVDASKYIEELKQKVERLN+DI+  QT
Sbjct: 1   MVSREHKRAALHEKLQLLRSITNSHA-LNKTSIIVDASKYIEELKQKVERLNEDIAAAQT 60

Query: 61  SIH----PMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQL 120
           S H    P+VTVE+L KGF INV SEKSC GLLVS+LEAFEELGLNVLEARVSCTDSF+L
Sbjct: 61  SNHQNPLPVVTVETLEKGFLINVLSEKSCPGLLVSILEAFEELGLNVLEARVSCTDSFRL 120

Query: 121 QAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQ 153
           QA+    E+  E IDAQ VK+AV++AIK WS+S +Q
Sbjct: 121 QAVGGENEEQSETIDAQVVKQAVLQAIKNWSESTDQ 155

[Close]

BLAST of Carg02145 vs. TrEMBL
Match: tr|A0A1R3HFM6|A0A1R3HFM6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_29264 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.4e-49
Identity = 114/156 (73.08%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  A+LH  LQLLRSITNSHA LNK SIIVDASKYIEELK+KVERLNQDI+  Q+
Sbjct: 1   MVSREHKRAALHEKLQLLRSITNSHA-LNKTSIIVDASKYIEELKEKVERLNQDIAAAQS 60

Query: 61  SIH----PMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQL 120
           S      PMVTVE+L KGF INVFSEKSC GLLVS+LEAFEELGLNVLEARVSCT+SF+L
Sbjct: 61  SNDQNPLPMVTVETLEKGFLINVFSEKSCPGLLVSILEAFEELGLNVLEARVSCTESFRL 120

Query: 121 QAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQ 153
           QA+    E+  E+IDAQ VK+AV++AIK WSQ+ +Q
Sbjct: 121 QAVGGENEEQSESIDAQVVKQAVLQAIKNWSQNSDQ 155

[Close]

BLAST of Carg02145 vs. TrEMBL
Match: tr|A0A1R3HTQ0|A0A1R3HTQ0_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17225 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-48
Identity = 113/156 (72.44%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MVSREHNNASLHHNLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQT 60
           MVSREH  A+LH  LQLLRSITNSHA LNK SIIVDASKYIEELK+KVERLNQDI+  Q+
Sbjct: 1   MVSREHKRAALHEKLQLLRSITNSHA-LNKTSIIVDASKYIEELKEKVERLNQDIAAAQS 60

Query: 61  SIH----PMVTVESLAKGFSINVFSEKSCQGLLVSVLEAFEELGLNVLEARVSCTDSFQL 120
           S      PMVTVE+L KGF INVFSEKSC GLLVS+LEAFEELGLNVLEARVSCT+SF+L
Sbjct: 61  SNDQNPLPMVTVETLEKGFLINVFSEKSCPGLLVSILEAFEELGLNVLEARVSCTESFRL 120

Query: 121 QAIAEIEEQGEEAIDAQAVKEAVVEAIKIWSQSGEQ 153
           QA+    E+  E+IDAQ VK+AV++AIK WS++ +Q
Sbjct: 121 QAVGGENEEQSESIDAQVVKQAVLQAIKNWSENSDQ 155

The following BLAST results are available for this feature:

BLAST of Carg02145 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551078.1	1.6e-72	98.69	uncharacterized protein LOC111809011 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022939239.1	3.6e-72	98.04	uncharacterized protein LOC111445214 isoform X3 [Cucurbita moschata]	[more]
XP_022993986.1	8.1e-72	97.39	uncharacterized protein LOC111489817 isoform X3 [Cucurbita maxima]	[more]
XP_023551079.1	1.2e-70	98.04	uncharacterized protein LOC111809011 isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_022939241.1	2.6e-70	97.39	uncharacterized protein LOC111445214 isoform X4 [Cucurbita moschata]	[more]

BLAST of Carg02145 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40435.1	1.7e-39	61.69	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]
AT3G56220.1	3.3e-35	56.13	transcription regulators	[more]
AT1G29270.1	4.8e-10	33.33	unknown protein	[more]
AT5G10570.1	1.0e-07	27.92	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12860.1	4.7e-05	22.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg02145 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LXA9\|BH061_ARATH	1.8e-06	27.92	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
sp\|Q9LPW3\|SCRM2_ARATH	8.4e-04	22.29	Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1	[more]

BLAST of Carg02145 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E185\|A0A1S4E185_CUCME	1.0e-54	80.00	uncharacterized protein LOC103496601 OS=Cucumis melo OX=3656 GN=LOC103496601 PE=...	[more]
tr\|A0A0A0K8N7\|A0A0A0K8N7_CUCSA	1.0e-54	80.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G013900 PE=4 SV=1	[more]
tr\|A0A061EDZ5\|A0A061EDZ5_THECC	2.2e-49	73.72	Transcription factor bHLH61 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_017056 P...	[more]
tr\|A0A1R3HFM6\|A0A1R3HFM6_9ROSI	6.4e-49	73.08	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_29264 PE=4 SV=1	[more]
tr\|A0A1R3HTQ0\|A0A1R3HTQ0_COCAP	1.4e-48	72.44	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17225 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02145-RA	Carg02145-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..61
None	No IPR available	PANTHER	PTHR31945:SF8	SUBFAMILY NOT NAMED	coord: 1..149
None	No IPR available	PANTHER	PTHR31945	FAMILY NOT NAMED	coord: 1..149
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 87..143 e-value: 0.00849031 score: 31.3645
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 4..68 e-value: 8.6E-6 score: 27.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 11..70

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02145	Cla006617	Watermelon (97103) v1	carwmB0261
Carg02145	Csa6G013900	Cucumber (Chinese Long) v2	carcuB0297
Carg02145	Csa4G329560	Cucumber (Chinese Long) v2	carcuB0290
Carg02145	MELO3C019989	Melon (DHL92) v3.5.1	carmeB0269
Carg02145	ClCG11G005870	Watermelon (Charleston Gray)	carwcgB0255
Carg02145	ClCG04G006520	Watermelon (Charleston Gray)	carwcgB0257
Carg02145	CSPI06G01980	Wild cucumber (PI 183967)	carcpiB0301
Carg02145	CSPI04G16400	Wild cucumber (PI 183967)	carcpiB0294
Carg02145	Cucsa.130380	Cucumber (Gy14) v1	carcgyB0306
Carg02145	Cucsa.326150	Cucumber (Gy14) v1	carcgyB0319
Carg02145	CmaCh04G028770	Cucurbita maxima (Rimu)	carcmaB0374
Carg02145	CmaCh03G003070	Cucurbita maxima (Rimu)	carcmaB0366
Carg02145	CmaCh15G001530	Cucurbita maxima (Rimu)	carcmaB0362
Carg02145	CmoCh03G003200	Cucurbita moschata (Rifu)	carcmoB0363
Carg02145	CmoCh04G030040	Cucurbita moschata (Rifu)	carcmoB0370
Carg02145	Lsi03G002800	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02145	Lsi01G016000	Bottle gourd (USVL1VR-Ls)	carlsiB231
Carg02145	Cp4.1LG13g07390	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02145	Cp4.1LG10g07670	Cucurbita pepo (Zucchini)	carcpeB0365
Carg02145	Cp4.1LG01g21760	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02145	CsGy4G015710	Cucumber (Gy14) v2	carcgybB0277
Carg02145	CsGy6G002060	Cucumber (Gy14) v2	carcgybB0284
Carg02145	MELO3C026050.2	Melon (DHL92) v3.6.1	carmedB0285
Carg02145	MELO3C019989.2	Melon (DHL92) v3.6.1	carmedB0280
Carg02145	CsaV3_6G002130	Cucumber (Chinese Long) v3	carcucB0300
Carg02145	CsaV3_4G027000	Cucumber (Chinese Long) v3	carcucB0293
Carg02145	Cla97C11G212780	Watermelon (97103) v2	carwmbB0269
Carg02145	Cla97C04G073120	Watermelon (97103) v2	carwmbB0272
Carg02145	Bhi04G001855	Wax gourd	carwgoB0349
Carg02145	Bhi03G001744	Wax gourd	carwgoB0351

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02145	Carg05951	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02145	Silver-seed gourd	carcarB305
Carg02145	Cucurbita maxima (Rimu)	carcmaB0375
Carg02145	Cucurbita moschata (Rifu)	carcmoB0362
Carg02145	Cucurbita moschata (Rifu)	carcmoB0373
Carg02145	Bottle gourd (USVL1VR-Ls)	carlsiB242
Carg02145	Watermelon (Charleston Gray)	carwcgB0260
Carg02145	Watermelon (97103) v1	carwmB0254
Carg02145	Watermelon (97103) v1	carwmB0259
Carg02145	Watermelon (97103) v2	carwmbB0276