CmaCh14G019220 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G019220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	BTB/POZ domain-containing protein
Location	Cma_Chr14 : 13561105 .. 13562384 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTAATGGCTATAATTCTCAGCATTTTCACTTTTTGTACTTGTATGTTGCTGTTTAGGCTTTGATTTCGCTACCTAATTTGGTCGTAATCGTGATATTAACTCCATTATCTCTCAAAATGTTGCTGCGTTAGAGCTCGTACAGTGTATTTCGAGGAGCGCTTTTTCTTTCAGTCGAGACCTCTACGATTGCAGTTTTGGGAAAATCATTCGTCTGTAATGATCTGAGAGAGAGCTACAAAGCTATGATTATCAGAAACTAGAAAGAAAAAATGACTCAAGATATTTTGGGTTTGGTTCTGTAGATTATACAGAAGAATCTTCCGAACATGGCAGACAAATCGGACAAGGATGTCTCCGATTGGTAAAACTTTTTTTCTTCATCCATTTAGTTAACAGTTTCGTTTTCCCTGTCTTGATTGTTTGGAAACGGTCGCTCATCTTCATTCTGGTTTGCAGGTTACCTTAGGTCAGTGTGAGAATGTGGGATTCTGGATTCAGTTACATATTTGTTTTGTTCAAATTCCTGTGATTTTTCGGTTATGTTTGTTGGATGAAAGCCTCACATCAGCTAATTTAAGGAATGATCATGGGTTTATAATCAAGGAATACTATCTCCATTGGAATGAGGCCTTTTGGGGAAGCCCAAAGTAAAGCCATGAGAGCTTAGGCTCAAAGTGGACAATATCGTACCATTGTGGAGAGTCGTGTTCATCTAACAAATCTTTATTATTTTTCTACCGGATATCATAGTAGAAAAGTCAGGCAAGATAGCGGAGTTACTGAATGAGCAATCTGAGGGCAGTATAGGTCAATTCCTCAGAAGCATGAACTCGTTGCAAGGTTCTGCCATGGGTTTCAACTGCAAATGTCATGTGAGAATGTGTTTCCTTTAGCTTGTCTTGCTTTCTATCCAGGGATGACTGAAAGTCACAACCCAAATAACCTGTTGAGTAAAGCACTTACTTTCCTTGAACAGAAAATCCTCCCTAGCTGGATTGAAGCCATTAAGGCTTTTCTTAAAACAGAAGATATTGTGCAACAGACTGTGGAAATAGGCCTTGTTGATGAATGTATGAGTCTTTGGTCAGTAAGGAAGTGAATGATCCGTACCTCCTTAGCGAACCGATTGTGAATTTTGTAAATGATGAACTCAGTGAGGATGATGTGTTTCATCACAAGCCCAGTGCAAGAAGAAAACTCTCTGTTTCTGAATGGCAGTTGGAGGATTTGACAATTCAGCCTCCTGTATTGTATGAACTGACTGTTCATTCTATGTAG

mRNA sequence

CGGTAATGGCTATAATTCTCAGCATTTTCACTTTTTGTACTTGTATGTTGCTGTTTAGGCTTTGATTTCGCTACCTAATTTGGTCGTAATCGTGATATTAACTCCATTATCTCTCAAAATGTTGCTGCGTTAGAGCTCGTACAGTGTATTTCGAGGAGCGCTTTTTCTTTCAGTCGAGACCTCTACGATTGCAGTTTTGGGAAAATCATTCGTCTGTAATGATCTGAGAGAGAGCTACAAAGCTATGATTATCAGAAACTAGAAAGAAAAAATGACTCAAGATATTTTGGGTTTGGTTCTGTAGATTATACAGAAGAATCTTCCGAACATGGCAGACAAATCGGACAAGGATGTCTCCGATTGGTTACCTTAGGTCAATTCCTCAGAAGCATGAACTCGTTGCAAGGTTCTGCCATGGGTTTCAACTGCAAATGTCATGTGAGAATGTGTTTCCTTTAGCTTGTCTTGCTTTCTATCCAGGGATGACTGAAAGTCACAACCCAAATAACCTGTTGAGTAAAGCACTTACTTTCCTTGAACAGAAAATCCTCCCTAGCTGGATTGAAGCCATTAAGGCTTTTCTTAAAACAGAAGATATTGTGCAACAGACTGTGGAAATAGGCCTTGTTGATGAATGTATGAGTCTTTGTGAGGATGATGTGTTTCATCACAAGCCCAGTGCAAGAAGAAAACTCTCTGTTTCTGAATGGCAGTTGGAGGATTTGACAATTCAGCCTCCTGTATTGTATGAACTGACTGTTCATTCTATGTAG

Coding sequence (CDS)

ATGTCTCCGATTGGTTACCTTAGGTCAATTCCTCAGAAGCATGAACTCGTTGCAAGGTTCTGCCATGGGTTTCAACTGCAAATGTCATGTGAGAATGTGTTTCCTTTAGCTTGTCTTGCTTTCTATCCAGGGATGACTGAAAGTCACAACCCAAATAACCTGTTGAGTAAAGCACTTACTTTCCTTGAACAGAAAATCCTCCCTAGCTGGATTGAAGCCATTAAGGCTTTTCTTAAAACAGAAGATATTGTGCAACAGACTGTGGAAATAGGCCTTGTTGATGAATGTATGAGTCTTTGTGAGGATGATGTGTTTCATCACAAGCCCAGTGCAAGAAGAAAACTCTCTGTTTCTGAATGGCAGTTGGAGGATTTGACAATTCAGCCTCCTGTATTGTATGAACTGACTGTTCATTCTATGTAG

Protein sequence

MSPIGYLRSIPQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECMSLCEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM

Homology

[Close]

BLAST of CmaCh14G019220 vs. Swiss-Prot
Match: Y5758_ARATH (BTB/POZ domain-containing protein At5g17580 OS=Arabidopsis thaliana GN=At5g17580 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.4e-18
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 1


Query: 11  PQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSW 70
           P+  ELVARFC+G + + + + +  + C+A+Y GM E  + NNLL KA  FLE ++ PSW
Sbjct: 55  PETFELVARFCNGSEFKFTSDTIVSVLCIAYYLGMNEEQSSNNLLGKASEFLEHRVFPSW 114

Query: 71  IEAIKAFLKTEDIVQQTVEIGLVDECM-SLCED----------------DVFHHKPSARR 130
            E I A    +    +  ++GLVD    SL E                 +   ++P+ RR
Sbjct: 115 SETINALRSGDKSFDKLADVGLVDVFFDSLIEKASYDPRLLGELIKNRAETDDYRPNPRR 174

Query: 131 KLSVSEWQLEDLTIQPPVLYE 135
           +L V +W+ EDL   P  LYE
Sbjct: 175 RLFVIDWKSEDLITIPLRLYE 195

[Close]

BLAST of CmaCh14G019220 vs. Swiss-Prot
Match: Y3351_ARATH (BTB/POZ domain-containing protein At3g03510 OS=Arabidopsis thaliana GN=At3g03510 PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 34/85 (40.00%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 11  PQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSW 70
           P    LV RFC+G+++++S +N+  + C+A+Y  M++ H+ NNLL+KA+TFLEQ++L SW
Sbjct: 58  PSIFHLVTRFCYGYKIELSADNIVSVLCIAYYLEMSDDHSSNNLLNKAVTFLEQRVLMSW 117

Query: 71  IEAIKAF-LKTEDIVQQTVEIGLVD 95
            E +KA  + ++ I+ +   +GL++
Sbjct: 118 SETVKALCICSDKILDKLANVGLIE 142

[Close]

BLAST of CmaCh14G019220 vs. Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 9.8e-12
Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 1


Query: 15  ELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWIEAI 74
           ELVA+FC+G +L+++  NV  L C A +  MTE H   NL+S+  TF  Q +L SW ++I
Sbjct: 83  ELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSI 142

Query: 75  KAFLKTEDIVQQTVEIGLVDECM 98
           KA    +++++   E+ +  +C+
Sbjct: 143 KALHSCDEVLEYADELNITKKCI 165

[Close]

BLAST of CmaCh14G019220 vs. Swiss-Prot
Match: Y5656_ARATH (BTB/POZ domain-containing protein At5g66560 OS=Arabidopsis thaliana GN=At5g66560 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 12  QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWI 71
           +  E+VA+FC+G ++ +S   V PL C A +  MTE ++P+NL+SK   FL   +  S  
Sbjct: 115 ESFEMVAKFCYGVKMDLSASTVVPLRCAAEHLEMTEEYSPDNLISKTERFLSHSVYKSLR 174

Query: 72  EAIKAFLKTEDIVQQTVEIGLVDECM 98
           E+IKA    E +      +G+ ++C+
Sbjct: 175 ESIKALKACESVSPLAGSLGITEQCI 200

[Close]

BLAST of CmaCh14G019220 vs. Swiss-Prot
Match: Y5738_ARATH (BTB/POZ domain-containing protein At5g67385 OS=Arabidopsis thaliana GN=At5g67385 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 5.4e-10
Identity = 40/129 (31.01%), Postives = 60/129 (46.51%), Query Frame = 1


Query: 15  ELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWIEAI 74
           EL A+FC+G    MS EN+  L C A Y  MTE H+  NL+ +A  +L +  L S   +I
Sbjct: 81  ELAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENLVVRAEAYLNEVALKSLSSSI 140

Query: 75  KAFLKTEDIVQQTVEIGLVDECMS-----LCEDDVFHHKPSA-----------RRKLSVS 128
               K+E ++     + LV  C+       C++  F    S+           + K  V 
Sbjct: 141 TVLHKSEKLLPIAERVKLVSRCIDAIAYMTCQESHFCSPSSSNSGNNEVVVQQQSKQPVV 200

[Close]

BLAST of CmaCh14G019220 vs. TrEMBL
Match: A0A0A0L9A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129530 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.2e-49
Identity = 105/162 (64.81%), Postives = 115/162 (70.99%), Query Frame = 1


Query: 6   YLRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR+IP      ELVARFCHGF+L+MSCENV PLACLAFY GMTESH+PNNLLSKALTF 
Sbjct: 63  FLRNIPAHPNTFELVARFCHGFRLKMSCENVLPLACLAFYLGMTESHSPNNLLSKALTFF 122

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECM------------------------S 125
           EQKILPSW E IKAFL TEDI+QQ V+ GLVDEC+                         
Sbjct: 123 EQKILPSWNETIKAFLTTEDIMQQAVDTGLVDECIESLVGKAVNNPYLLGEPIVNFISDE 182

Query: 126 LCEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           L EDDV HH PSARRKL VSEWQ EDLTI P  LYELT+HS+
Sbjct: 183 LSEDDVLHHNPSARRKLFVSEWQSEDLTILPLSLYELTIHSL 224

[Close]

BLAST of CmaCh14G019220 vs. TrEMBL
Match: A0A061EZT3_THECC (Phototropic-responsive NPH3 family protein, putative OS=Theobroma cacao GN=TCM_025679 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-28
Identity = 72/161 (44.72%), Postives = 97/161 (60.25%), Query Frame = 1


Query: 7   LRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLE 66
           LR IP   +  ELVARFCHG+++ MS EN+ PL CL+FY GM E+H+ NNLLSKA+TF E
Sbjct: 61  LRDIPADAETFELVARFCHGYEVHMSTENIVPLICLSFYLGMDENHSSNNLLSKAVTFFE 120

Query: 67  QKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECMSL------------------------ 126
           Q++LPSW E IKA   +E  +QQT+++GL D C+                          
Sbjct: 121 QRVLPSWNEVIKALHVSEKFLQQTMQLGLFDACLQTMIAKASDNPRLLGEPIKLSTNYND 180

Query: 127 CEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
            ED    ++P+ARR+L V +WQ E LT  P  LYE  +++M
Sbjct: 181 TEDGDDSYRPNARRRLFVLDWQ-EGLTTLPLQLYEPIIYAM 220

[Close]

BLAST of CmaCh14G019220 vs. TrEMBL
Match: A0A0D2M0B7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G184500 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.4e-26
Identity = 70/153 (45.75%), Postives = 90/153 (58.82%), Query Frame = 1


Query: 7   LRSIPQKHE---LVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLE 66
           L  IP   E   LVARFCHG  +QMS EN+ PL CL+FY GM E+H  NNLLSKA+TF E
Sbjct: 49  LHDIPADSETFDLVARFCHGCAVQMSTENIVPLICLSFYLGMDENHCNNNLLSKAVTFFE 108

Query: 67  QKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECMS----------------LCEDDVFHH 126
           Q +LPSW E IKA   +E  +QQT++IGL D C+                 +   D    
Sbjct: 109 QTVLPSWNEIIKALRSSEKSLQQTMQIGLFDACLQAMIAKASDNPRHLGEPIVSTDKGDD 168

Query: 127 KPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           +P+A+R+L   +WQ EDLT     LYE  +++M
Sbjct: 169 RPNAKRRLFALDWQ-EDLTTLSLQLYEPIIYTM 200

[Close]

BLAST of CmaCh14G019220 vs. TrEMBL
Match: B9I6S2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s07130g PE=4 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-25
Identity = 70/155 (45.16%), Postives = 86/155 (55.48%), Query Frame = 1


Query: 11  PQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSW 70
           P+  ELVARFCHG++L +S ENV PL  LA+Y  MTESH+ NNLL K L F E K+LPSW
Sbjct: 65  PETFELVARFCHGYELILSTENVIPLISLAYYLEMTESHSDNNLLDKTLAFFEDKVLPSW 124

Query: 71  IEAIKAFLKTEDIVQQTVEIGLVDECM--------------------SLCEDD-----VF 130
            E IKA      I+QQ +  GLVD C+                    S C +D     VF
Sbjct: 125 NETIKALRSASSIIQQVLHSGLVDACLESLIYKALADPRLLGEPIKNSTCNEDSEDEEVF 184

Query: 131 HHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
             KP+ARRKL   +W+ EDLT     LY   + +M
Sbjct: 185 --KPNARRKLFSPDWKSEDLTTLSLQLYNPLIQAM 217

[Close]

BLAST of CmaCh14G019220 vs. TrEMBL
Match: V4VE34_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10033437mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.2e-25
Identity = 69/162 (42.59%), Postives = 93/162 (57.41%), Query Frame = 1


Query: 6   YLRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR I    +  ELV RFCHGF+ Q+S ENV P+  LA Y  MTE+H  NNLL +AL F 
Sbjct: 48  FLRDISPDTETFELVLRFCHGFEPQISTENVIPIIGLADYLEMTEAHCRNNLLRRALIFF 107

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECMS--------------------LCED 125
           EQ++LPSW E IKA    +D +QQ V++GLVD C                       C++
Sbjct: 108 EQEVLPSWNETIKALRVADDFLQQAVQLGLVDACFRSLIEKAVADPHLLGAPMKNLSCDE 167

Query: 126 DVFH----HKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           D       ++P+ARRKL V +W+ EDLT+    L++ T+ SM
Sbjct: 168 DSEDADDAYRPNARRKLFVIDWKSEDLTVLSLQLFDATIRSM 209

[Close]

BLAST of CmaCh14G019220 vs. TAIR10
Match: AT5G17580.1 (AT5G17580.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.0e-19
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 1


Query: 11  PQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSW 70
           P+  ELVARFC+G + + + + +  + C+A+Y GM E  + NNLL KA  FLE ++ PSW
Sbjct: 55  PETFELVARFCNGSEFKFTSDTIVSVLCIAYYLGMNEEQSSNNLLGKASEFLEHRVFPSW 114

Query: 71  IEAIKAFLKTEDIVQQTVEIGLVDECM-SLCED----------------DVFHHKPSARR 130
            E I A    +    +  ++GLVD    SL E                 +   ++P+ RR
Sbjct: 115 SETINALRSGDKSFDKLADVGLVDVFFDSLIEKASYDPRLLGELIKNRAETDDYRPNPRR 174

Query: 131 KLSVSEWQLEDLTIQPPVLYE 135
           +L V +W+ EDL   P  LYE
Sbjct: 175 RLFVIDWKSEDLITIPLRLYE 195

[Close]

BLAST of CmaCh14G019220 vs. TAIR10
Match: AT3G03510.1 (AT3G03510.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 34/85 (40.00%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 11 PQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSW 70
          P    LV RFC+G+++++S +N+  + C+A+Y  M++ H+ NNLL+KA+TFLEQ++L SW
Sbjct: 5  PSIFHLVTRFCYGYKIELSADNIVSVLCIAYYLEMSDDHSSNNLLNKAVTFLEQRVLMSW 64

Query: 71 IEAIKAF-LKTEDIVQQTVEIGLVD 95
           E +KA  + ++ I+ +   +GL++
Sbjct: 65 SETVKALCICSDKILDKLANVGLIE 89

[Close]

BLAST of CmaCh14G019220 vs. TAIR10
Match: AT1G30440.1 (AT1G30440.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.5e-13
Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 1


Query: 15  ELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWIEAI 74
           ELVA+FC+G +L+++  NV  L C A +  MTE H   NL+S+  TF  Q +L SW ++I
Sbjct: 83  ELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSI 142

Query: 75  KAFLKTEDIVQQTVEIGLVDECM 98
           KA    +++++   E+ +  +C+
Sbjct: 143 KALHSCDEVLEYADELNITKKCI 165

[Close]

BLAST of CmaCh14G019220 vs. TAIR10
Match: AT5G66560.1 (AT5G66560.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 12  QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWI 71
           +  E+VA+FC+G ++ +S   V PL C A +  MTE ++P+NL+SK   FL   +  S  
Sbjct: 115 ESFEMVAKFCYGVKMDLSASTVVPLRCAAEHLEMTEEYSPDNLISKTERFLSHSVYKSLR 174

Query: 72  EAIKAFLKTEDIVQQTVEIGLVDECM 98
           E+IKA    E +      +G+ ++C+
Sbjct: 175 ESIKALKACESVSPLAGSLGITEQCI 200

[Close]

BLAST of CmaCh14G019220 vs. TAIR10
Match: AT5G67385.1 (AT5G67385.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 40/129 (31.01%), Postives = 60/129 (46.51%), Query Frame = 1


Query: 15  ELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFLEQKILPSWIEAI 74
           EL A+FC+G    MS EN+  L C A Y  MTE H+  NL+ +A  +L +  L S   +I
Sbjct: 81  ELAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENLVVRAEAYLNEVALKSLSSSI 140

Query: 75  KAFLKTEDIVQQTVEIGLVDECMS-----LCEDDVFHHKPSA-----------RRKLSVS 128
               K+E ++     + LV  C+       C++  F    S+           + K  V 
Sbjct: 141 TVLHKSEKLLPIAERVKLVSRCIDAIAYMTCQESHFCSPSSSNSGNNEVVVQQQSKQPVV 200

[Close]

BLAST of CmaCh14G019220 vs. NCBI nr
Match: gi|659075737|ref|XP_008438303.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-48
Identity = 106/162 (65.43%), Postives = 114/162 (70.37%), Query Frame = 1


Query: 6   YLRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR+IP      ELVARFCHGF+L MSCENV PLACLAFY GMTESH+PNNLLSKALTF 
Sbjct: 60  FLRNIPAHPNTFELVARFCHGFRLTMSCENVLPLACLAFYLGMTESHSPNNLLSKALTFF 119

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECM------------------------S 125
           EQKILPSW E IKAFL TEDI+QQ V+ GLVDEC+                         
Sbjct: 120 EQKILPSWNETIKAFLTTEDIMQQAVDTGLVDECIESLVGKAVNNPYLLGEPIVNFISDE 179

Query: 126 LCEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           L EDDV HH PSARRKL VSEWQ EDLTI P  LYELT+HSM
Sbjct: 180 LSEDDVIHHNPSARRKLFVSEWQSEDLTILPLSLYELTIHSM 221

[Close]

BLAST of CmaCh14G019220 vs. NCBI nr
Match: gi|659075735|ref|XP_008438302.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-48
Identity = 106/162 (65.43%), Postives = 114/162 (70.37%), Query Frame = 1


Query: 6   YLRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR+IP      ELVARFCHGF+L MSCENV PLACLAFY GMTESH+PNNLLSKALTF 
Sbjct: 110 FLRNIPAHPNTFELVARFCHGFRLTMSCENVLPLACLAFYLGMTESHSPNNLLSKALTFF 169

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECM------------------------S 125
           EQKILPSW E IKAFL TEDI+QQ V+ GLVDEC+                         
Sbjct: 170 EQKILPSWNETIKAFLTTEDIMQQAVDTGLVDECIESLVGKAVNNPYLLGEPIVNFISDE 229

Query: 126 LCEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           L EDDV HH PSARRKL VSEWQ EDLTI P  LYELT+HSM
Sbjct: 230 LSEDDVIHHNPSARRKLFVSEWQSEDLTILPLSLYELTIHSM 271

[Close]

BLAST of CmaCh14G019220 vs. NCBI nr
Match: gi|778677745|ref|XP_011650855.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 105/162 (64.81%), Postives = 115/162 (70.99%), Query Frame = 1


Query: 6   YLRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR+IP      ELVARFCHGF+L+MSCENV PLACLAFY GMTESH+PNNLLSKALTF 
Sbjct: 60  FLRNIPAHPNTFELVARFCHGFRLKMSCENVLPLACLAFYLGMTESHSPNNLLSKALTFF 119

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECM------------------------S 125
           EQKILPSW E IKAFL TEDI+QQ V+ GLVDEC+                         
Sbjct: 120 EQKILPSWNETIKAFLTTEDIMQQAVDTGLVDECIESLVGKAVNNPYLLGEPIVNFISDE 179

Query: 126 LCEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           L EDDV HH PSARRKL VSEWQ EDLTI P  LYELT+HS+
Sbjct: 180 LSEDDVLHHNPSARRKLFVSEWQSEDLTILPLSLYELTIHSL 221

[Close]

BLAST of CmaCh14G019220 vs. NCBI nr
Match: gi|778677742|ref|XP_011650854.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 105/162 (64.81%), Postives = 115/162 (70.99%), Query Frame = 1


Query: 6   YLRSIP---QKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR+IP      ELVARFCHGF+L+MSCENV PLACLAFY GMTESH+PNNLLSKALTF 
Sbjct: 63  FLRNIPAHPNTFELVARFCHGFRLKMSCENVLPLACLAFYLGMTESHSPNNLLSKALTFF 122

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECM------------------------S 125
           EQKILPSW E IKAFL TEDI+QQ V+ GLVDEC+                         
Sbjct: 123 EQKILPSWNETIKAFLTTEDIMQQAVDTGLVDECIESLVGKAVNNPYLLGEPIVNFISDE 182

Query: 126 LCEDDVFHHKPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
           L EDDV HH PSARRKL VSEWQ EDLTI P  LYELT+HS+
Sbjct: 183 LSEDDVLHHNPSARRKLFVSEWQSEDLTILPLSLYELTIHSL 224

[Close]

BLAST of CmaCh14G019220 vs. NCBI nr
Match: gi|702331141|ref|XP_010054487.1| (PREDICTED: BTB/POZ domain-containing protein At5g17580-like, partial [Eucalyptus grandis])

HSP 1 Score: 139.0 bits (349), Expect = 6.1e-30
Identity = 74/163 (45.40%), Postives = 99/163 (60.74%), Query Frame = 1


Query: 6   YLRSI---PQKHELVARFCHGFQLQMSCENVFPLACLAFYPGMTESHNPNNLLSKALTFL 65
           +LR I   P   ELVARFCHG+++Q+S EN  PL CLAFY  MTE+H+PNNLL KA+ FL
Sbjct: 24  FLRDISADPNTFELVARFCHGWEVQLSTENAVPLICLAFYLEMTETHSPNNLLKKAIDFL 83

Query: 66  EQKILPSWIEAIKAFLKTEDIVQQTVEIGLVDECMS--LCEDDVFHH------------- 125
           E+++LPSW E I+A   +E ++QQ V +GL+D C+S  + +  V  H             
Sbjct: 84  EERVLPSWNETIRALRLSEKLLQQAVHLGLIDACLSSIIAKAQVEPHLLGKPIKAPKMDE 143

Query: 126 ----------KPSARRKLSVSEWQLEDLTIQPPVLYELTVHSM 141
                     +P+ARRKL V +WQ EDLT  P   YEL + +M
Sbjct: 144 SSEGEEDGECRPNARRKLFVLDWQSEDLTTLPLRFYELVIKAM 186

The following BLAST results are available for this feature:

BLAST of CmaCh14G019220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5758_ARATH	5.4e-18	35.46	BTB/POZ domain-containing protein At5g17580 OS=Arabidopsis thaliana GN=At5g17580...	[more]
Y3351_ARATH	1.9e-15	40.00	BTB/POZ domain-containing protein At3g03510 OS=Arabidopsis thaliana GN=At3g03510...	[more]
Y1044_ARATH	9.8e-12	37.35	BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440...	[more]
Y5656_ARATH	1.9e-10	34.88	BTB/POZ domain-containing protein At5g66560 OS=Arabidopsis thaliana GN=At5g66560...	[more]
Y5738_ARATH	5.4e-10	31.01	BTB/POZ domain-containing protein At5g67385 OS=Arabidopsis thaliana GN=At5g67385...	[more]

BLAST of CmaCh14G019220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A5_CUCSA	9.2e-49	64.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129530 PE=4 SV=1	[more]
A0A061EZT3_THECC	3.1e-28	44.72	Phototropic-responsive NPH3 family protein, putative OS=Theobroma cacao GN=TCM_0...	[more]
A0A0D2M0B7_GOSRA	8.4e-26	45.75	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G184500 PE=4 SV=1	[more]
B9I6S2_POPTR	1.4e-25	45.16	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s07130g PE=4 SV=2	[more]
V4VE34_9ROSI	9.2e-25	42.59	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10033437mg PE=...	[more]

BLAST of CmaCh14G019220 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17580.1	3.0e-19	35.46	Phototropic-responsive NPH3 family protein	[more]
AT3G03510.1	1.1e-16	40.00	Phototropic-responsive NPH3 family protein	[more]
AT1G30440.1	5.5e-13	37.35	Phototropic-responsive NPH3 family protein	[more]
AT5G66560.1	1.0e-11	34.88	Phototropic-responsive NPH3 family protein	[more]
AT5G67385.1	3.0e-11	31.01	Phototropic-responsive NPH3 family protein	[more]

BLAST of CmaCh14G019220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075737\|ref\|XP_008438303.1\|	1.0e-48	65.43	PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis melo]	[more]
gi\|659075735\|ref\|XP_008438302.1\|	1.0e-48	65.43	PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis melo]	[more]
gi\|778677745\|ref\|XP_011650855.1\|	1.3e-48	64.81	PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X2 [Cucumis sativ...	[more]
gi\|778677742\|ref\|XP_011650854.1\|	1.3e-48	64.81	PREDICTED: BTB/POZ domain-containing protein At5g17580 isoform X1 [Cucumis sativ...	[more]
gi\|702331141\|ref\|XP_010054487.1\|	6.1e-30	45.40	PREDICTED: BTB/POZ domain-containing protein At5g17580-like, partial [Eucalyptus...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G019220.1	CmaCh14G019220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32370	FAMILY NOT NAMED	coord: 15..134 score: 1.2
None	No IPR available	PANTHER	PTHR32370:SF36	SUBFAMILY NOT NAMED	coord: 15..134 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G019220	CmoCh14G019770	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G019220	CmoCh06G012280	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G019220	Lsi05G018770	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G019220	Cp4.1LG08g02560	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G019220	Cp4.1LG03g17900	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G019220	MELO3C006281.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G019220	CsaV3_3G010600	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G019220	Cla97C05G083610	Watermelon (97103) v2	cmawmbB263
CmaCh14G019220	CsGy3G010550	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G019220	Carg06315	Silver-seed gourd	carcmaB1320
CmaCh14G019220	Carg14901	Silver-seed gourd	carcmaB0874

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G019220	CmaCh06G011880	Cucurbita maxima (Rimu)	cmacmaB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G019220	Wax gourd	cmawgoB0297
CmaCh14G019220	Wax gourd	cmawgoB0329
CmaCh14G019220	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh14G019220	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G019220	Cucumber (Gy14) v1	cgycmaB0885
CmaCh14G019220	Cucurbita moschata (Rifu)	cmacmoB251
CmaCh14G019220	Cucurbita moschata (Rifu)	cmacmoB279
CmaCh14G019220	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G019220	Wild cucumber (PI 183967)	cmacpiB262
CmaCh14G019220	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G019220	Cucumber (Chinese Long) v2	cmacuB259
CmaCh14G019220	Melon (DHL92) v3.5.1	cmameB241
CmaCh14G019220	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G019220	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G019220	Watermelon (Charleston Gray)	cmawcgB235
CmaCh14G019220	Watermelon (97103) v1	cmawmB242
CmaCh14G019220	Cucurbita pepo (Zucchini)	cmacpeB259
CmaCh14G019220	Bottle gourd (USVL1VR-Ls)	cmalsiB225
CmaCh14G019220	Bottle gourd (USVL1VR-Ls)	cmalsiB259
CmaCh14G019220	Cucumber (Gy14) v2	cgybcmaB323
CmaCh14G019220	Melon (DHL92) v3.6.1	cmamedB277
CmaCh14G019220	Silver-seed gourd	carcmaB0313
CmaCh14G019220	Silver-seed gourd	carcmaB1485
CmaCh14G019220	Cucumber (Chinese Long) v3	cmacucB0297
CmaCh14G019220	Watermelon (97103) v2	cmawmbB252
CmaCh14G019220	Watermelon (97103) v2	cmawmbB266