CmaCh14G012810 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh14G012810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionBhelix-loop-helix transcription factor
LocationCma_Chr14 : 10133846 .. 10134900 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATTCAATATACTTTATGAGGACATCTCATTGCTCCAAATCTTCATAAATACGAACACCTCCACTCCCCCCACCAAATCGACAAGGCCCAAAAACGAAGAACCCTTCTCCCTTTTGTCTTCTCCTCAAACTTCAAAACCCTTCCATAGCCTGTAATTATGGATGATTTGCTTTGGAATGGCTCGTGGAGCAACGAAGAACACAACGGTTGTAACGAAAGCTTATTCGTCTCCGATGACTCGAGTCGTTGTTCGAGTCTTCCATTACAAGAGCTTCAGATGGTTGCAAGAATGTCGAAGTTTCCAGAGATGGCAAAGGATTCAGAGTCTTGGTCGGAGGGAGATTTGTTGGAAGAGCTTGAAAATGACAAAGGTTTAATATTTAACGTTACCATGCAATATTAGCTTTAGATTTCCATGCAATAACCCACGAGATTTTGTTACGTAGGAATTGCACCAAAGGGTGGAGTTTTGGACATTTTTGAAAACCACAAGTCAAAACAACAAAACTCTACAACTTCATCTTCGAACAACGACGAGGTCAAGCCTTTTAATCGAGATCGAGCCATGTCACAAATGAAGGAATTGGTATACTATGCAGCGGTGTTTAGGCCAGTGAGCTCGGGATCAGAGACGGTGAAGAAGAAGAGGAGGAGGAACGTTAATACATCGAAGGAGCCACAGACGGTGGCAGCGAGGAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGCTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAAATGGACACTGCCTCCATGCTGGATGAGGCAGCAAGCTATCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGGTTAAGCTACAAACTTGGATCCATTGATTGTCTCTCAACTTCCACATCTTTCAACCCTCCTTTTTCCACAATTAATGCTTATTTTCCTCTCTAATATCATAATCTATCATCTTTATCAATAAAATATTAATCTATGATCTTCGCACCGTTTAGAGAATTTTCCTTACAGGTTGTGTGCTTCAACTCCAACGAGTATAACTCACATACATGACG

mRNA sequence

ACAATTCAATATACTTTATGAGGACATCTCATTGCTCCAAATCTTCATAAATACGAACACCTCCACTCCCCCCACCAAATCGACAAGGCCCAAAAACGAAGAACCCTTCTCCCTTTTGTCTTCTCCTCAAACTTCAAAACCCTTCCATAGCCTGTAATTATGGATGATTTGCTTTGGAATGGCTCGTGGAGCAACGAAGAACACAACGGTTGTAACGAAAGCTTATTCGTCTCCGATGACTCGAGTCGTTGTTCGAGTCTTCCATTACAAGAGCTTCAGATGGTTGCAAGAATGTCGAAGTTTCCAGAGATGGCAAAGGATTCAGAGTCTTGGTCGGAGGGAGATTTGTTGGAAGAGCTTGAAAATGACAAAGGAATTGCACCAAAGGGTGGAGTTTTGGACATTTTTGAAAACCACAAGTCAAAACAACAAAACTCTACAACTTCATCTTCGAACAACGACGAGGTCAAGCCTTTTAATCGAGATCGAGCCATGTCACAAATGAAGGAATTGGTATACTATGCAGCGGTGTTTAGGCCAGTGAGCTCGGGATCAGAGACGGTGAAGAAGAAGAGGAGGAGGAACGTTAATACATCGAAGGAGCCACAGACGGTGGCAGCGAGGAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGCTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAAATGGACACTGCCTCCATGCTGGATGAGGCAGCAAGCTATCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGGTTAAGCTACAAACTTGGATCCATTGATTGTCTCTCAACTTCCACATCTTTCAACCCTCCTTTTTCCACAATTAATGCTTATTTTCCTCTCTAATATCATAATCTATCATCTTTATCAATAAAATATTAATCTATGATCTTCGCACCGTTTAGAGAATTTTCCTTACAGGTTGTGTGCTTCAACTCCAACGAGTATAACTCACATACATGACG

Coding sequence (CDS)

ATGGATGATTTGCTTTGGAATGGCTCGTGGAGCAACGAAGAACACAACGGTTGTAACGAAAGCTTATTCGTCTCCGATGACTCGAGTCGTTGTTCGAGTCTTCCATTACAAGAGCTTCAGATGGTTGCAAGAATGTCGAAGTTTCCAGAGATGGCAAAGGATTCAGAGTCTTGGTCGGAGGGAGATTTGTTGGAAGAGCTTGAAAATGACAAAGGAATTGCACCAAAGGGTGGAGTTTTGGACATTTTTGAAAACCACAAGTCAAAACAACAAAACTCTACAACTTCATCTTCGAACAACGACGAGGTCAAGCCTTTTAATCGAGATCGAGCCATGTCACAAATGAAGGAATTGGTATACTATGCAGCGGTGTTTAGGCCAGTGAGCTCGGGATCAGAGACGGTGAAGAAGAAGAGGAGGAGGAACGTTAATACATCGAAGGAGCCACAGACGGTGGCAGCGAGGAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGCTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAAATGGACACTGCCTCCATGCTGGATGAGGCAGCAAGCTATCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGGTTAAGCTACAAACTTGGATCCATTGATTGTCTCTCAACTTCCACATCTTTCAACCCTCCTTTTTCCACAATTAATGCTTATTTTCCTCTCTAA

Protein sequence

MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSEGDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL
Homology
[Close]
BLAST of CmaCh14G012810 vs. Swiss-Prot
Match: BH087_ARATH (Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 1 

Query: 76  KGGVLDIFENHKSKQQNSTTS-----SSN---------NDEVKPFNRDRAMSQMKELVYY 135
           KGG   I++ ++SK +   T      SSN         +D V+P     A++QMKE++Y 
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLSDNVEP--DAEAIAQMKEMIYR 253

Query: 136 AAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTA 195
           AA FRPV+ G E V+K +R+NV  S +PQTVAAR+RRE+ISEKIR LQ LVPGG+KMDTA
Sbjct: 254 AAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTA 313

Query: 196 SMLDEAASYLKFLRAQIKALEGLSYKLG--SIDCLSTSTSF 221
           SMLDEAA+YLKFLRAQ+KALE L  KL   ++   S  TSF
Sbjct: 314 SMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSF 352

[Close]
BLAST of CmaCh14G012810 vs. Swiss-Prot
Match: HEC1_ARATH (Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.1e-23
Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 1 

Query: 67  LENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFR 126
           L N   I+P      +F + ++   N+   ++             M+ M+E+++  AV +
Sbjct: 63  LTNPSSISPNTAYSSVFLDKRNNSNNNNNGTN-------------MAAMREMIFRIAVMQ 122

Query: 127 PVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDE 186
           P+    E VK  +RRNV  SK+PQ+VAAR RRE+ISE+IR LQRLVPGG+KMDTASMLDE
Sbjct: 123 PIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 182

Query: 187 AASYLKFLRAQIKALE 203
           A  Y+KFL+ Q+++LE
Sbjct: 183 AIHYVKFLKKQVQSLE 185

[Close]
BLAST of CmaCh14G012810 vs. Swiss-Prot
Match: HEC2_ARATH (Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 54/91 (59.34%), Postives = 74/91 (81.32%), Query Frame = 1 

Query: 112 MSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRL 171
           M+ M+E+++  AV +P+    E+VK  +R+NV  SK+PQ+VAAR RRE+ISE+IR LQRL
Sbjct: 92  MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151

Query: 172 VPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           VPGG+KMDTASMLDEA  Y+KFL+ Q+++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]
BLAST of CmaCh14G012810 vs. Swiss-Prot
Match: IND_ARATH (Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 1 

Query: 101 DEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREK 160
           DE + ++ D  M  MKE+ Y  AV +PV     TV K  RRNV  S +PQTV AR+RRE+
Sbjct: 76  DEDEEYDED--MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRER 135

Query: 161 ISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           ISEKIR L+R+VPGG+KMDTASMLDEA  Y KFL+ Q++ L+
Sbjct: 136 ISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]
BLAST of CmaCh14G012810 vs. Swiss-Prot
Match: HEC3_ARATH (Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 59/109 (54.13%), Postives = 74/109 (67.89%), Query Frame = 1 

Query: 93  STTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTV 152
           S     + DE +P      +  MKE++Y  A  + V     TVKK +RRNV  S +PQ+V
Sbjct: 76  SGDQEDDEDEEEPLEE---LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSV 135

Query: 153 AARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKAL 202
           AAR RRE+ISE+IR LQRLVPGG+KMDTASMLDEA  Y+KFL+ QI+ L
Sbjct: 136 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]
BLAST of CmaCh14G012810 vs. TrEMBL
Match: A0A0A0LDH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G850530 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.2e-71
Identity = 170/269 (63.20%), Postives = 188/269 (69.89%), Query Frame = 1 

Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPE---------- 60
           MDDLLWN SWSNEE++G  ESLFVSDD SRCSS PLQELQ VAR+   PE          
Sbjct: 1   MDDLLWNSSWSNEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETRV 60

Query: 61  --MAKDSE-------SW-----SEGDLLEELENDKGIAPKGGVLDIFENHKSKQQN---- 120
             +A+DS+       SW     + G L E LENDKGIA KGG LDI EN K  QQN    
Sbjct: 61  GKLAEDSKVLFECEKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIE 120

Query: 121 -------STT-------SSSNNDEVKP-FNRDRAMSQMKELVYYAAVFRPVSSGSETVKK 180
                  STT       SSSN +E++   +RD+ +SQMKE +YYAAVFRPV+ G ETV+K
Sbjct: 121 NQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEK 180

Query: 181 KRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQ 227
           KRR+NV  SKEPQTVAARKRREKISEKIR LQRLVPGGSKMD  SMLDEAASYLKFLRAQ
Sbjct: 181 KRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQ 240

[Close]
BLAST of CmaCh14G012810 vs. TrEMBL
Match: A0A061GAT2_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_028961 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.0e-33
Identity = 86/148 (58.11%), Postives = 113/148 (76.35%), Query Frame = 1 

Query: 90  QQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEP 149
           QQ S++ SS+ +E  P     A++QMKE++Y AA FRPVS G E V+K +R+NV  S +P
Sbjct: 320 QQPSSSVSSSIEEPDP----EAIAQMKEMIYRAAAFRPVSLGLEVVEKPKRKNVRISTDP 379

Query: 150 QTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLG 209
           QTVAAR+RRE+ISE+IR LQRLVPGGSKMDTASMLDEAA+YLKFLR+Q+KALE L +KL 
Sbjct: 380 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLD 439

Query: 210 SIDCLSTSTSFNP-PFS---TINAYFPL 234
            ++C  T+ +F+  PF+    +  +FPL
Sbjct: 440 PVNCPPTNHAFSSLPFNHSLPMQTHFPL 463

[Close]
BLAST of CmaCh14G012810 vs. TrEMBL
Match: A0A061GIV9_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_028961 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.0e-33
Identity = 86/148 (58.11%), Postives = 113/148 (76.35%), Query Frame = 1 

Query: 90  QQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEP 149
           QQ S++ SS+ +E  P     A++QMKE++Y AA FRPVS G E V+K +R+NV  S +P
Sbjct: 320 QQPSSSVSSSIEEPDP----EAIAQMKEMIYRAAAFRPVSLGLEVVEKPKRKNVRISTDP 379

Query: 150 QTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLG 209
           QTVAAR+RRE+ISE+IR LQRLVPGGSKMDTASMLDEAA+YLKFLR+Q+KALE L +KL 
Sbjct: 380 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLD 439

Query: 210 SIDCLSTSTSFNP-PFS---TINAYFPL 234
            ++C  T+ +F+  PF+    +  +FPL
Sbjct: 440 PVNCPPTNHAFSSLPFNHSLPMQTHFPL 463

[Close]
BLAST of CmaCh14G012810 vs. TrEMBL
Match: A0A151SU65_CAJCA (Transcription factor bHLH87 OS=Cajanus cajan GN=KK1_013756 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32
Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 85  NHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVN 144
           N   +Q NS+ + S+ +E  P     A++QMKE++Y AA FRPV+ G E V+K +R+NV 
Sbjct: 198 NINFQQPNSSMTPSSLEEPDP----EAIAQMKEMIYRAAAFRPVNLGMEVVEKPKRKNVK 257

Query: 145 TSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGL 204
            S +PQTVAAR+RRE+ISE+IR LQ++VPGGSKMDTASMLDEAA+YLKFLR+Q+KALE L
Sbjct: 258 ISTDPQTVAARQRRERISERIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALENL 317

Query: 205 SYKLGSIDCLSTST--SFNPPFSTINAYFPL 234
             KL +++C  T+   SFNP F  +  +FP+
Sbjct: 318 GNKLDTMNCPPTNIAFSFNPSF-PVQTHFPI 343

[Close]
BLAST of CmaCh14G012810 vs. TrEMBL
Match: W9S199_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003123 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-32
Identity = 85/142 (59.86%), Postives = 106/142 (74.65%), Query Frame = 1 

Query: 85  NHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVN 144
           N +    NS+ SSS   E  P     A++QMKE++Y AA FRPV+ G E V+K +R+NV 
Sbjct: 298 NFQQPSNNSSMSSSVEHEPDP----EAIAQMKEMMYRAAAFRPVNLGLEIVEKPKRKNVK 357

Query: 145 TSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGL 204
            S +PQTVAAR+RRE+ISE+IR LQRLVPGGSKMDTASMLDEAA+YLKFLR+Q+KALE L
Sbjct: 358 ISNDPQTVAARERRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALETL 417

Query: 205 SYKLGSIDCLSTST--SFNPPF 225
             K+ S++C  T+   SFNP F
Sbjct: 418 GQKIDSMNCPPTNIAFSFNPSF 435

[Close]
BLAST of CmaCh14G012810 vs. TAIR10
Match: AT3G21330.1 (AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 6.8e-32
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 1 

Query: 76  KGGVLDIFENHKSKQQNSTTS-----SSN---------NDEVKPFNRDRAMSQMKELVYY 135
           KGG   I++ ++SK +   T      SSN         +D V+P     A++QMKE++Y 
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLSDNVEP--DAEAIAQMKEMIYR 253

Query: 136 AAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTA 195
           AA FRPV+ G E V+K +R+NV  S +PQTVAAR+RRE+ISEKIR LQ LVPGG+KMDTA
Sbjct: 254 AAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTA 313

Query: 196 SMLDEAASYLKFLRAQIKALEGLSYKLG--SIDCLSTSTSF 221
           SMLDEAA+YLKFLRAQ+KALE L  KL   ++   S  TSF
Sbjct: 314 SMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSF 352

[Close]
BLAST of CmaCh14G012810 vs. TAIR10
Match: AT5G67060.1 (AT5G67060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 1 

Query: 67  LENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFR 126
           L N   I+P      +F + ++   N+   ++             M+ M+E+++  AV +
Sbjct: 63  LTNPSSISPNTAYSSVFLDKRNNSNNNNNGTN-------------MAAMREMIFRIAVMQ 122

Query: 127 PVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDE 186
           P+    E VK  +RRNV  SK+PQ+VAAR RRE+ISE+IR LQRLVPGG+KMDTASMLDE
Sbjct: 123 PIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 182

Query: 187 AASYLKFLRAQIKALE 203
           A  Y+KFL+ Q+++LE
Sbjct: 183 AIHYVKFLKKQVQSLE 185

[Close]
BLAST of CmaCh14G012810 vs. TAIR10
Match: AT3G50330.1 (AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-23
Identity = 54/91 (59.34%), Postives = 74/91 (81.32%), Query Frame = 1 

Query: 112 MSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRL 171
           M+ M+E+++  AV +P+    E+VK  +R+NV  SK+PQ+VAAR RRE+ISE+IR LQRL
Sbjct: 92  MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151

Query: 172 VPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           VPGG+KMDTASMLDEA  Y+KFL+ Q+++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]
BLAST of CmaCh14G012810 vs. TAIR10
Match: AT4G00120.1 (AT4G00120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-23
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 1 

Query: 101 DEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREK 160
           DE + ++ D  M  MKE+ Y  AV +PV     TV K  RRNV  S +PQTV AR+RRE+
Sbjct: 76  DEDEEYDED--MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRER 135

Query: 161 ISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           ISEKIR L+R+VPGG+KMDTASMLDEA  Y KFL+ Q++ L+
Sbjct: 136 ISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]
BLAST of CmaCh14G012810 vs. TAIR10
Match: AT5G09750.1 (AT5G09750.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 6.4e-22
Identity = 59/109 (54.13%), Postives = 74/109 (67.89%), Query Frame = 1 

Query: 93  STTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTV 152
           S     + DE +P      +  MKE++Y  A  + V     TVKK +RRNV  S +PQ+V
Sbjct: 76  SGDQEDDEDEEEPLEE---LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSV 135

Query: 153 AARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKAL 202
           AAR RRE+ISE+IR LQRLVPGG+KMDTASMLDEA  Y+KFL+ QI+ L
Sbjct: 136 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]
BLAST of CmaCh14G012810 vs. NCBI nr
Match: gi|449458249|ref|XP_004146860.1| (PREDICTED: transcription factor bHLH87-like [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 3.1e-71
Identity = 170/269 (63.20%), Postives = 188/269 (69.89%), Query Frame = 1 

Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPE---------- 60
           MDDLLWN SWSNEE++G  ESLFVSDD SRCSS PLQELQ VAR+   PE          
Sbjct: 1   MDDLLWNSSWSNEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETRV 60

Query: 61  --MAKDSE-------SW-----SEGDLLEELENDKGIAPKGGVLDIFENHKSKQQN---- 120
             +A+DS+       SW     + G L E LENDKGIA KGG LDI EN K  QQN    
Sbjct: 61  GKLAEDSKVLFECEKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIE 120

Query: 121 -------STT-------SSSNNDEVKP-FNRDRAMSQMKELVYYAAVFRPVSSGSETVKK 180
                  STT       SSSN +E++   +RD+ +SQMKE +YYAAVFRPV+ G ETV+K
Sbjct: 121 NQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEK 180

Query: 181 KRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQ 227
           KRR+NV  SKEPQTVAARKRREKISEKIR LQRLVPGGSKMD  SMLDEAASYLKFLRAQ
Sbjct: 181 KRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQ 240

[Close]
BLAST of CmaCh14G012810 vs. NCBI nr
Match: gi|659093530|ref|XP_008447580.1| (PREDICTED: transcription factor bHLH87-like [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 7.7e-70
Identity = 167/268 (62.31%), Postives = 186/268 (69.40%), Query Frame = 1 

Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPE---------- 60
           M+DLLWN SWSNEE +G  ESLFVSD   RCSS PLQELQ VAR+   PE          
Sbjct: 1   MEDLLWNSSWSNEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIRV 60

Query: 61  --MAKDS-----------ESWSEGDLLEELENDKGIAPKGGVLDIFENHKSKQQN----- 120
             +AKDS           E  + G L E LEND+GIAPKGG LDIFEN K  QQN     
Sbjct: 61  EKLAKDSNVFEREKSCPVEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEK 120

Query: 121 ------STT-------SSSNNDEVKPF-NRDRAMSQMKELVYYAAVFRPVSSGSETVKKK 180
                 STT       SSS  +E++   ++DR +SQMK+ +YYAAVF+PV+ G ETV+KK
Sbjct: 121 LPSSTNSTTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLGLETVEKK 180

Query: 181 RRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQI 227
           RRRNV  SKEPQTVAARKRREKISEKIR L+RLVPGGSKMD ASMLDEAASYLKFLRAQI
Sbjct: 181 RRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYLKFLRAQI 240

[Close]
BLAST of CmaCh14G012810 vs. NCBI nr
Match: gi|590619805|ref|XP_007024383.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 86/148 (58.11%), Postives = 113/148 (76.35%), Query Frame = 1 

Query: 90  QQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEP 149
           QQ S++ SS+ +E  P     A++QMKE++Y AA FRPVS G E V+K +R+NV  S +P
Sbjct: 320 QQPSSSVSSSIEEPDP----EAIAQMKEMIYRAAAFRPVSLGLEVVEKPKRKNVRISTDP 379

Query: 150 QTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLG 209
           QTVAAR+RRE+ISE+IR LQRLVPGGSKMDTASMLDEAA+YLKFLR+Q+KALE L +KL 
Sbjct: 380 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLD 439

Query: 210 SIDCLSTSTSFNP-PFS---TINAYFPL 234
            ++C  T+ +F+  PF+    +  +FPL
Sbjct: 440 PVNCPPTNHAFSSLPFNHSLPMQTHFPL 463

[Close]
BLAST of CmaCh14G012810 vs. NCBI nr
Match: gi|590619801|ref|XP_007024382.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 86/148 (58.11%), Postives = 113/148 (76.35%), Query Frame = 1 

Query: 90  QQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEP 149
           QQ S++ SS+ +E  P     A++QMKE++Y AA FRPVS G E V+K +R+NV  S +P
Sbjct: 320 QQPSSSVSSSIEEPDP----EAIAQMKEMIYRAAAFRPVSLGLEVVEKPKRKNVRISTDP 379

Query: 150 QTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLG 209
           QTVAAR+RRE+ISE+IR LQRLVPGGSKMDTASMLDEAA+YLKFLR+Q+KALE L +KL 
Sbjct: 380 QTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLD 439

Query: 210 SIDCLSTSTSFNP-PFS---TINAYFPL 234
            ++C  T+ +F+  PF+    +  +FPL
Sbjct: 440 PVNCPPTNHAFSSLPFNHSLPMQTHFPL 463

[Close]
BLAST of CmaCh14G012810 vs. NCBI nr
Match: gi|720088154|ref|XP_010244365.1| (PREDICTED: transcription factor bHLH87 [Nelumbo nucifera])

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 84/143 (58.74%), Postives = 108/143 (75.52%), Query Frame = 1 

Query: 91  QNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQ 150
           Q S +S S+ DE+       A++QMKE++Y AAVFRPV+ G E V+K +R+NV  S +PQ
Sbjct: 314 QQSNSSFSSADELDA----EAIAQMKEMIYRAAVFRPVNLGLEVVEKPKRKNVRISSDPQ 373

Query: 151 TVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLGS 210
           TVAAR RRE+ISE+IR LQRLVPGG+KMDTA+MLDEAA+YLKFLR+Q+KALE L +K  S
Sbjct: 374 TVAARHRRERISERIRVLQRLVPGGTKMDTATMLDEAANYLKFLRSQVKALETLGHKADS 433

Query: 211 IDCLSTSTSFNPPFSTINAYFPL 234
           ++C ST+   N PF  +   FPL
Sbjct: 434 VNCSSTNLPPNLPF-PMQTIFPL 451

The following BLAST results are available for this feature:
BLAST of CmaCh14G012810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH087_ARATH1.2e-3054.04Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1[more]
HEC1_ARATH7.1e-2344.85Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1[more]
HEC2_ARATH2.7e-2259.34Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1[more]
IND_ARATH1.3e-2156.86Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3[more]
HEC3_ARATH1.1e-2054.13Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1[more]
BLAST of CmaCh14G012810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH7_CUCSA2.2e-7163.20Uncharacterized protein OS=Cucumis sativus GN=Csa_3G850530 PE=4 SV=1[more]
A0A061GAT2_THECC9.0e-3358.11Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Th... [more]
A0A061GIV9_THECC9.0e-3358.11Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 OS=Th... [more]
A0A151SU65_CAJCA2.6e-3255.63Transcription factor bHLH87 OS=Cajanus cajan GN=KK1_013756 PE=4 SV=1[more]
W9S199_9ROSA3.4e-3259.86Uncharacterized protein OS=Morus notabilis GN=L484_003123 PE=4 SV=1[more]
BLAST of CmaCh14G012810 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G21330.16.8e-3254.04 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G67060.14.0e-2444.85 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G50330.11.5e-2359.34 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G00120.17.5e-2356.86 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G09750.16.4e-2254.13 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmaCh14G012810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458249|ref|XP_004146860.1|3.1e-7163.20PREDICTED: transcription factor bHLH87-like [Cucumis sativus][more]
gi|659093530|ref|XP_008447580.1|7.7e-7062.31PREDICTED: transcription factor bHLH87-like [Cucumis melo][more]
gi|590619805|ref|XP_007024383.1|1.3e-3258.11Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 [Theo... [more]
gi|590619801|ref|XP_007024382.1|1.3e-3258.11Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theo... [more]
gi|720088154|ref|XP_010244365.1|2.9e-3258.74PREDICTED: transcription factor bHLH87 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G012810.1CmaCh14G012810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 145..202
score: 3.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 154..194
score: 6.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 151..200
score: 5.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 145..194
score: 1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 147..207
score: 2.22
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 111..202
score: 2.3
NoneNo IPR availablePANTHERPTHR12565:SF174TRANSCRIPTION FACTOR BHLH87coord: 111..202
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh14G012810Cucsa.341410Cucumber (Gy14) v1cgycmaB0927
CmaCh14G012810Cucsa.360770Cucumber (Gy14) v1cgycmaB0980
CmaCh14G012810Cla012633Watermelon (97103) v1cmawmB232
CmaCh14G012810Cla015607Watermelon (97103) v1cmawmB225
CmaCh14G012810Csa3G850530Cucumber (Chinese Long) v2cmacuB244
CmaCh14G012810Csa7G452040Cucumber (Chinese Long) v2cmacuB273
CmaCh14G012810MELO3C013023Melon (DHL92) v3.5.1cmameB230
CmaCh14G012810MELO3C024411Melon (DHL92) v3.5.1cmameB218
CmaCh14G012810ClCG07G013530Watermelon (Charleston Gray)cmawcgB242
CmaCh14G012810ClCG09G000460Watermelon (Charleston Gray)cmawcgB218
CmaCh14G012810CSPI03G41690Wild cucumber (PI 183967)cmacpiB246
CmaCh14G012810CSPI07G23080Wild cucumber (PI 183967)cmacpiB277
CmaCh14G012810CmoCh17G007170Cucurbita moschata (Rifu)cmacmoB249
CmaCh14G012810CmoCh08G007180Cucurbita moschata (Rifu)cmacmoB280
CmaCh14G012810CmoCh14G013140Cucurbita moschata (Rifu)cmacmoB245
CmaCh14G012810CmoCh01G000800Cucurbita moschata (Rifu)cmacmoB256
CmaCh14G012810Lsi07G005480Bottle gourd (USVL1VR-Ls)cmalsiB256
CmaCh14G012810Lsi02G029600Bottle gourd (USVL1VR-Ls)cmalsiB233
CmaCh14G012810Cp4.1LG12g08690Cucurbita pepo (Zucchini)cmacpeB257
CmaCh14G012810Cp4.1LG17g05170Cucurbita pepo (Zucchini)cmacpeB267
CmaCh14G012810Cp4.1LG02g14290Cucurbita pepo (Zucchini)cmacpeB282
CmaCh14G012810Cp4.1LG03g14310Cucurbita pepo (Zucchini)cmacpeB283
CmaCh14G012810MELO3C024411.2Melon (DHL92) v3.6.1cmamedB247
CmaCh14G012810MELO3C013023.2Melon (DHL92) v3.6.1cmamedB261
CmaCh14G012810CsaV3_7G035000Cucumber (Chinese Long) v3cmacucB0318
CmaCh14G012810CsaV3_3G044120Cucumber (Chinese Long) v3cmacucB0283
CmaCh14G012810Cla97C07G140340Watermelon (97103) v2cmawmbB275
CmaCh14G012810Cla97C09G162350Watermelon (97103) v2cmawmbB282
CmaCh14G012810Bhi09G000329Wax gourdcmawgoB0358
CmaCh14G012810Bhi01G002590Wax gourdcmawgoB0316
CmaCh14G012810CsGy7G021350Cucumber (Gy14) v2cgybcmaB912
CmaCh14G012810CsGy3G039120Cucumber (Gy14) v2cgybcmaB309
CmaCh14G012810Carg18750Silver-seed gourdcarcmaB1043
CmaCh14G012810Carg09481Silver-seed gourdcarcmaB1418
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh14G012810CmaCh01G000810Cucurbita maxima (Rimu)cmacmaB254
CmaCh14G012810CmaCh08G007520Cucurbita maxima (Rimu)cmacmaB297
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh14G012810Bottle gourd (USVL1VR-Ls)cmalsiB228
CmaCh14G012810Bottle gourd (USVL1VR-Ls)cmalsiB253
CmaCh14G012810Melon (DHL92) v3.6.1cmamedB255
CmaCh14G012810Melon (DHL92) v3.6.1cmamedB269
CmaCh14G012810Silver-seed gourdcarcmaB0154
CmaCh14G012810Silver-seed gourdcarcmaB0276
CmaCh14G012810Silver-seed gourdcarcmaB0798
CmaCh14G012810Cucumber (Chinese Long) v3cmacucB0274
CmaCh14G012810Watermelon (97103) v2cmawmbB254
CmaCh14G012810Watermelon (97103) v2cmawmbB258
CmaCh14G012810Wax gourdcmawgoB0363
CmaCh14G012810Cucurbita maxima (Rimu)cmacmaB245
CmaCh14G012810Cucurbita maxima (Rimu)cmacmaB277