CmaCh14G011730 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G011730
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Lipid transfer protein
Location	Cma_Chr14 : 9328737 .. 9329027 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACCTTCATAGCGCAGGCCTTTGCCTTCTCGTGGTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGCAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCGGGGGCACGGCCAACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAACAACCATGCTTTTGTGGGTATCTGAAAGATCCAAGAGTCAAACCTTATGTACAATCTCCTCGCGCCAGAACGGTTGCTTCTTCCTGTGGCGTTGCCATCCCCACCACCTGCTAG

mRNA sequence

ATGAAGAACCTTCATAGCGCAGGCCTTTGCCTTCTCGTGGTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGCAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCGGGGGCACGGCCAACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAACAACCATGCTTTTGTGGGTATCTGAAAGATCCAAGAGTCAAACCTTATGTACAATCTCCTCGCGCCAGAACGGTTGCTTCTTCCTGTGGCGTTGCCATCCCCACCACCTGCTAG

Coding sequence (CDS)

ATGAAGAACCTTCATAGCGCAGGCCTTTGCCTTCTCGTGGTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGCAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCGGGGGCACGGCCAACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAACAACCATGCTTTTGTGGGTATCTGAAAGATCCAAGAGTCAAACCTTATGTACAATCTCCTCGCGCCAGAACGGTTGCTTCTTCCTGTGGCGTTGCCATCCCCACCACCTGCTAG

Protein sequence

MKNLHSAGLCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVKPYVQSPRARTVASSCGVAIPTTC

Homology

[Close]

BLAST of CmaCh14G011730 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 9  LCLLVVVAI--LTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGY 68
          +C +VVVA+  +    V EAV+CNPTELS C+ AIT  G++P+  CC KLK Q+PC C Y
Sbjct: 12 VCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITG-GSKPSSTCCSKLKVQEPCLCNY 71

Query: 69 LKDPRVKPYVQSPRARTVASSCGVAIP 94
          +K+P +K YV SP A+ V S+CGV  P
Sbjct: 72 IKNPSLKQYVNSPGAKKVLSNCGVTYP 97

[Close]

BLAST of CmaCh14G011730 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.1e-17
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 1


Query: 28 SCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVKPYVQSPRARTVASS 87
          +C+  +LSPCL+AIT     P+ ACC KLK+Q+PC CGYLKDP +K YV SP AR  ASS
Sbjct: 2  TCSAVQLSPCLAAITK-NTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASS 61

Query: 88 CGVAI 93
          CGVA+
Sbjct: 62 CGVAL 65

[Close]

BLAST of CmaCh14G011730 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 1


Query: 27 VSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVKPYVQSPRARTVAS 86
          V+C+P +LSPCL  I S    PT  CC+KL++Q+PC CGYLK+P ++ YV SP AR +AS
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPT-TCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLAS 60

Query: 87 SCGVAIP 94
          +CGV +P
Sbjct: 61 NCGVPVP 66

[Close]

BLAST of CmaCh14G011730 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15
Identity = 44/84 (52.38%), Postives = 53/84 (63.10%), Query Frame = 1


Query: 12 LVVVAILTGAHVGEA-VSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDP 71
          + +VA   G  VG A  SCN  +L+ C  AI + GARPT ACC  L+ QQ CFC + KDP
Sbjct: 12 VAMVAACGGGVVGVAGASCNAGQLTVCAGAI-AGGARPTAACCSSLRAQQGCFCQFAKDP 71

Query: 72 RVKPYVQSPRARTVASSCGVAIPT 95
          R   YV SP AR   SSCG+A+PT
Sbjct: 72 RYGRYVNSPNARKAVSSCGIALPT 94

[Close]

BLAST of CmaCh14G011730 vs. Swiss-Prot
Match: NLTPX_ORYSJ (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-15
Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 1


Query: 12 LVVVAILTGAHVGEA-VSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDP 71
          + +VA   G  VG A   CN  +L+ C  AI + GARPT ACC  L+ QQ CFC + KDP
Sbjct: 12 VAMVAACGGGVVGVAGAGCNAGQLTVCTGAI-AGGARPTAACCSSLRAQQGCFCQFAKDP 71

Query: 72 RVKPYVQSPRARTVASSCGVAIPT 95
          R   YV SP AR   SSCG+A+PT
Sbjct: 72 RYGRYVNSPNARKAVSSCGIALPT 94

[Close]

BLAST of CmaCh14G011730 vs. TrEMBL
Match: A0A0A0KW80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-26
Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 1


Query: 1  MKNLHSAGLCLLVVVAI-LTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQ 60
          M  +   GLCLLVVVAI L+   +GEAVSCNPTELSPC+SAITS+ A PT ACC+KL+QQ
Sbjct: 1  MMKVQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSSTA-PTAACCQKLRQQ 60

Query: 61 QPCFCGYLKDPRVKPYVQSPRARTVASSCGVAIP 94
          +PC+CGYLKDP+ K Y +SPR R +AS C V IP
Sbjct: 61 EPCYCGYLKDPKYKAYAESPRVRAIASQCRVPIP 93

[Close]

BLAST of CmaCh14G011730 vs. TrEMBL
Match: A0A0B2SRX2_GLYSO (Putative non-specific lipid-transfer protein AKCS9-like protein OS=Glycine soja GN=glysoja_035025 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.5e-21
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 1


Query: 7  AGLCLLVVVAILTGAHVG---EAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCF 66
          + +C +VVVA+L  A VG   EAV+C PTELSPCL AITS GA+P+ ACC KLKQQ+PC 
Sbjct: 5  SAMCAVVVVALLLLAEVGPMAEAVTCTPTELSPCLPAITS-GAKPSNACCTKLKQQKPCL 64

Query: 67 CGYLKDPRVKPYVQSPRARTVASSCGVAIPT 95
          CGYLK+  +K YV SP AR   +SCG+  PT
Sbjct: 65 CGYLKNASLKQYVNSPNARKTVASCGIPFPT 94

[Close]

BLAST of CmaCh14G011730 vs. TrEMBL
Match: C6SZ93_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G088900 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.5e-21
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 1


Query: 7  AGLCLLVVVAILTGAHVG---EAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCF 66
          + +C +VVVA+L  A VG   EAV+C PTELSPCL AITS GA+P+ ACC KLKQQ+PC 
Sbjct: 5  SAMCAVVVVALLLLAEVGPMAEAVTCTPTELSPCLPAITS-GAKPSNACCTKLKQQKPCL 64

Query: 67 CGYLKDPRVKPYVQSPRARTVASSCGVAIPT 95
          CGYLK+  +K YV SP AR   +SCG+  PT
Sbjct: 65 CGYLKNASLKQYVNSPNARKTVASCGIPFPT 94

[Close]

BLAST of CmaCh14G011730 vs. TrEMBL
Match: J7FQE3_OLEEU (Non-specific lipid-transfer protein type 2 (Fragment) OS=Olea europaea PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.2e-21
Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1


Query: 14 VVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVK 73
          VV +L   HV EAV+CNP +LSPCL AITS G  P+ ACC+KL++Q+PC CGY+KDP + 
Sbjct: 2  VVLLLGELHVSEAVTCNPLQLSPCLGAITS-GQPPSAACCKKLQEQKPCLCGYIKDPNLG 61

Query: 74 PYVQSPRARTVASSCGVAIP 94
           YV SP A+ VASSCGVA+P
Sbjct: 62 KYVNSPNAKKVASSCGVAVP 80

[Close]

BLAST of CmaCh14G011730 vs. TrEMBL
Match: A0A0R0FHG0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G294200 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.0e-20
Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 1


Query: 7  AGLCLLVVVAILT---GAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCF 66
          + +C LV+VA++    G     AV+CNPT+L+PCL AI S G+ P+ ACC+KLK+Q+PCF
Sbjct: 5  SAMCALVLVALVVVEVGPMAEAAVTCNPTQLTPCLPAINS-GSAPSSACCQKLKEQKPCF 64

Query: 67 CGYLKDPRVKPYVQSPRARTVASSCGVAIPT 95
          CGYLK+P +K YV SP A+   SSCG+A PT
Sbjct: 65 CGYLKNPSLKQYVNSPNAKKTVSSCGIAYPT 94

[Close]

BLAST of CmaCh14G011730 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 5.7e-17
Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 9  LCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLK 68
          L  L  V ++  A   EAV+C+P +LSPC +AITS+   P+  CC KLK+Q+PC CGY++
Sbjct: 11 LFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSP-PSALCCAKLKEQRPCLCGYMR 70

Query: 69 DPRVKPYVQSPRARTVASSCGVAIP 94
          +P ++ +V +P AR V+ SC + IP
Sbjct: 71 NPSLRRFVSTPNARKVSKSCKLPIP 94

[Close]

BLAST of CmaCh14G011730 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 4.8e-16
Identity = 38/86 (44.19%), Postives = 59/86 (68.60%), Query Frame = 1


Query: 9  LCLLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLK 68
          L L   + +LT   V E V+C+P +L+ C +A+TS+   P+ ACC KL++QQPC CGY++
Sbjct: 10 LALAAAILLLT-VPVAEGVTCSPMQLASCAAAMTSSSP-PSEACCTKLREQQPCLCGYMR 69

Query: 69 DPRVKPYVQSPRARTVASSCGVAIPT 95
          +P ++ YV SP AR V++SC +  P+
Sbjct: 70 NPTLRQYVSSPNARKVSNSCKIPSPS 93

[Close]

BLAST of CmaCh14G011730 vs. TAIR10
Match: AT1G66850.1 (AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-14
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 1


Query: 19  TGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVKPYVQS 78
           TG      V+C+  +L PCL+AIT  G +P+ ACC KL +QQ C CG+ K+P    Y+ S
Sbjct: 27  TGDTGNVGVTCDARQLQPCLAAITGGG-QPSGACCAKLTEQQSCLCGFAKNPAFAQYISS 86

Query: 79  PRARTVASSCGVAIPT 95
           P AR V  +C VA PT
Sbjct: 87  PNARKVLLACNVAYPT 101

[Close]

BLAST of CmaCh14G011730 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 1


Query: 24  GEA-VSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVKPYVQSPRAR 83
           GEA V+C+  +LS C + + + G  P+  CC KLK+QQPCFC Y+KDPR   YV S  A+
Sbjct: 32  GEADVTCDAVQLSSCATPMLT-GVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAK 91

Query: 84  TVASSCGVAIPT 95
              ++CGV  PT
Sbjct: 92  KTLATCGVPYPT 102

[Close]

BLAST of CmaCh14G011730 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 5.0e-13
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 11 LLVVVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDP 70
          +L+++ +     V     CNP +LSPCL  I   G+ P+  CC K+K+QQ C C YLK+P
Sbjct: 15 ILLILIVAQENRVAAVDPCNPAQLSPCLETIMK-GSEPSDLCCSKVKEQQHCICQYLKNP 74

Query: 71 RVKPYVQSPRARTVASSCGVAIP 94
            K ++ SP A+ +A+ C    P
Sbjct: 75 NFKSFLNSPNAKIIATDCHCPYP 96

[Close]

BLAST of CmaCh14G011730 vs. NCBI nr
Match: gi|659086707|ref|XP_008444076.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 9.7e-27
Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 1


Query: 4  LHSAGLCLLVVVAI-LTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPC 63
          L   GLCLLVVVAI LTG  +GEA SCNPTELSPC+SAITS+ A PT ACC+KL+QQ+PC
Sbjct: 3  LQGPGLCLLVVVAIFLTGVRLGEAASCNPTELSPCVSAITSSTA-PTAACCQKLRQQEPC 62

Query: 64 FCGYLKDPRVKPYVQSPRARTVASSCGVAIP 94
          +CGYLKDP+ K Y +SPR R +AS C V IP
Sbjct: 63 YCGYLKDPKYKAYAESPRVRAIASQCRVPIP 92

[Close]

BLAST of CmaCh14G011730 vs. NCBI nr
Match: gi|700198655|gb|KGN53813.1| (hypothetical protein Csa_4G141210 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-26
Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 1


Query: 1  MKNLHSAGLCLLVVVAI-LTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQ 60
          M  +   GLCLLVVVAI L+   +GEAVSCNPTELSPC+SAITS+ A PT ACC+KL+QQ
Sbjct: 1  MMKVQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSSTA-PTAACCQKLRQQ 60

Query: 61 QPCFCGYLKDPRVKPYVQSPRARTVASSCGVAIP 94
          +PC+CGYLKDP+ K Y +SPR R +AS C V IP
Sbjct: 61 EPCYCGYLKDPKYKAYAESPRVRAIASQCRVPIP 93

[Close]

BLAST of CmaCh14G011730 vs. NCBI nr
Match: gi|659086713|ref|XP_008444080.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 4.7e-21
Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 1


Query: 1  MKNLHSAGLCLLVV--VAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQ 60
          MKNL    L LLVV  VA+LTGA V EAV+CN  +LSPC+ AITS  A P+  CC KL++
Sbjct: 1  MKNLRFTSLHLLVVAIVALLTGARVAEAVTCNTMQLSPCIGAITST-APPSTTCCSKLRE 60

Query: 61 QQPCFCGYLKDPRVKPYVQSPRARTVASSCGVAIP 94
          QQPCFCGY+K+P +  YV+S RA+ + S+CGV +P
Sbjct: 61 QQPCFCGYMKNPSLGGYVKSARAKAIISTCGVPLP 94

[Close]

BLAST of CmaCh14G011730 vs. NCBI nr
Match: gi|351726287|ref|NP_001238401.1| (uncharacterized protein LOC100306409 precursor [Glycine max])

HSP 1 Score: 108.2 bits (269), Expect = 8.0e-21
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 1


Query: 7  AGLCLLVVVAILTGAHVG---EAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCF 66
          + +C +VVVA+L  A VG   EAV+C PTELSPCL AITS GA+P+ ACC KLKQQ+PC 
Sbjct: 5  SAMCAVVVVALLLLAEVGPMAEAVTCTPTELSPCLPAITS-GAKPSNACCTKLKQQKPCL 64

Query: 67 CGYLKDPRVKPYVQSPRARTVASSCGVAIPT 95
          CGYLK+  +K YV SP AR   +SCG+  PT
Sbjct: 65 CGYLKNASLKQYVNSPNARKTVASCGIPFPT 94

[Close]

BLAST of CmaCh14G011730 vs. NCBI nr
Match: gi|399604773|gb|AFP49331.1| (non-specific lipid-transfer protein type 2, partial [Olea europaea])

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-20
Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1


Query: 14 VVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRVK 73
          VV +L   HV EAV+CNP +LSPCL AITS G  P+ ACC+KL++Q+PC CGY+KDP + 
Sbjct: 2  VVLLLGELHVSEAVTCNPLQLSPCLGAITS-GQPPSAACCKKLQEQKPCLCGYIKDPNLG 61

Query: 74 PYVQSPRARTVASSCGVAIP 94
           YV SP A+ VASSCGVA+P
Sbjct: 62 KYVNSPNAKKVASSCGVAVP 80

The following BLAST results are available for this feature:

BLAST of CmaCh14G011730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP_VIGUN	2.2e-18	52.87	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=...	[more]
NLTP2_APIGA	4.1e-17	61.54	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=...	[more]
NLTP2_PRUAR	1.2e-16	55.22	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1	[more]
NLTPX_ORYSI	1.7e-15	52.38	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=...	[more]
NLTPX_ORYSJ	5.0e-15	51.19	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 P...	[more]

BLAST of CmaCh14G011730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW80_CUCSA	1.5e-26	65.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1	[more]
A0A0B2SRX2_GLYSO	5.5e-21	60.44	Putative non-specific lipid-transfer protein AKCS9-like protein OS=Glycine soja ...	[more]
C6SZ93_SOYBN	5.5e-21	60.44	Uncharacterized protein OS=Glycine max GN=GLYMA_02G088900 PE=2 SV=1	[more]
J7FQE3_OLEEU	7.2e-21	62.50	Non-specific lipid-transfer protein type 2 (Fragment) OS=Olea europaea PE=2 SV=1	[more]
A0A0R0FHG0_SOYBN	8.0e-20	54.95	Uncharacterized protein OS=Glycine max GN=GLYMA_18G294200 PE=4 SV=1	[more]

BLAST of CmaCh14G011730 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18280.1	5.7e-17	45.88	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G48750.1	4.8e-16	44.19	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G66850.1	2.0e-14	47.37	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G38170.1	1.3e-13	48.61	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G73780.1	5.0e-13	38.55	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CmaCh14G011730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086707\|ref\|XP_008444076.1\|	9.7e-27	69.23	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]	[more]
gi\|700198655\|gb\|KGN53813.1\|	2.2e-26	65.96	hypothetical protein Csa_4G141210 [Cucumis sativus]	[more]
gi\|659086713\|ref\|XP_008444080.1\|	4.7e-21	57.89	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]	[more]
gi\|351726287\|ref\|NP_001238401.1\|	8.0e-21	60.44	uncharacterized protein LOC100306409 precursor [Glycine max]	[more]
gi\|399604773\|gb\|AFP49331.1\|	1.0e-20	62.50	non-specific lipid-transfer protein type 2, partial [Olea europaea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G011730.1	CmaCh14G011730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 12..96 score: 5.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 29..96 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 29..94 score: 1.98
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 28..94 score: 1.2
None	No IPR available	PANTHER	PTHR33214	FAMILY NOT NAMED	coord: 1..96 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G011730	MELO3C010393	Melon (DHL92) v3.5.1	cmameB246

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G011730	Cucumber (Gy14) v2	cgybcmaB487
CmaCh14G011730	Melon (DHL92) v3.6.1	cmamedB280
CmaCh14G011730	Silver-seed gourd	carcmaB0454
CmaCh14G011730	Cucurbita maxima (Rimu)	cmacmaB256
CmaCh14G011730	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G011730	Cucurbita moschata (Rifu)	cmacmoB258
CmaCh14G011730	Wild cucumber (PI 183967)	cmacpiB265
CmaCh14G011730	Cucumber (Chinese Long) v2	cmacuB262
CmaCh14G011730	Cucurbita pepo (Zucchini)	cmacpeB280
CmaCh14G011730	Cucurbita pepo (Zucchini)	cmacpeB283