CmaCh14G007540 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAACAAAGGCAGACACCCAATTCGCTCATCATTTATCTCGTCTTCTTCTTCTTCTTCCTCTTCTCCATTTTTCTTCATTACCGAAGAATTATGAATTACCCCTACGGCTACCAACATCCTCCGCCGGAAACCTACCCTCCTCCCGGTGAGATCCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGATTTTCCATTTTCATTTCATCTCATTTTTTCTTCTCTTCCATAGGGTACCGTCCGCCGCAACCTGGATATCCCGGCCATCAGCCGCTGCCTCCGCCGCCACATCAAGGATATCAAGGGTATTTCTACGATGGTTATTCTCCCTCGGCGCCGCCTCCTCCTCCTCCGCCGGGCCCTCCTCCACCGCCTTATTGTCATCAGCACTATCATTACGATGATCGAAATGACTGTTCCTCCTTCCTTCATGGATGGTACGTTTTCCTCCATTTCTTCGATTCGTGTTGACACGATTTTGATTTGTTTGCTTGTCTTCGTGATCTCGTTGATTGATTGATCGATTGATTCTGTGTTGTGAAAATTGATTGTTTTTGTGCAATGAATGTTTTGTGGATTTATTTGAATTTGGAAATCAGGAATTCAATTTGGATTTTCAATGAATGTTATGATCGAGCTGTTTAAACATCGAAGGTGTTTCTTGATCTTCTTTCAATTTGAATTACATTTTAAAATTCTTGCTGAATGTAGAATTGCCAGCCACATTGTTCCATCCGTTTCGAACAATTTCATCTTGCAATAGGCTCGAGTCCGCTTGATAACTATTTGGTTTTCGATTTTTTAAAATCGTTCTTATTTAAAAAAACGTTTGAGTTCTCAAAACTTGACTTGAATTTTGAAAACACTCGATACAAGGAGCTATCTCGAACCAATAACAATCATCTTTGTTCTTGTTATCATGAACTAAGCAGAATTTTCAATTGGTGCACAGAGCATCTGATGCTTCCCCATTAATGCTACCTTATGATCCAATCCTTTCTTCCTCTAATTATGTTTTATAGCTTTGGTTAAACTGTTGAATTGGACTGTCTCTTTTCATGTTTTGCTTTGTTTTTTTCTCATCCATGTTCGTCGCTGTTTTAACGTTCTTGTGCGTGAGATAGCGAAACAAGCCCAATCTCGTTCGACATGTTGTTTTCTTGTTTGATCCCTTTTCTTGTTGGGGACTTTCCTTCTTGCAATTGGTTATGTTTTAGCATTTACCTAGCTTGTGCCATTTTCCTCCTATGGATGCTGAAAGATTAGGGTCGAACGAGTACGTAAACTAGTAATCTTCAACACCAGAGAAATCGAATGTCGAATGTCTAAGACGTGTGAAATAACCGTGGCCACAAGTACATCATAAGATCCTTCCTGGGGCTTCTTTTAGCTTTTAGTACCAAATATGGATTCAAGGGAGAGTATCTTTTGATTATGAGTGTAACCTTAAACTTGTTGTCTTGTGCAGCTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGTTTGGCCTGCTTCCGATAGACCGTGTGTTTTTTTCGGTCTCTTCGGCCGAGATGTGTTCATGTCTTCTATTATTATGAATCGACGACGCCCGTGTTTCGCATCACTTGGAATAAGAACTGCAGTTTCTGGTTTGTGTGATCGTAAACTATCTGTATTGTTTGTGATATCTAAATGCTGTTATTTACTCTTATATATATATATATATATACCTGAACAAATAGTTGTTAATAGAGTTGGAATCCTTATTTATTGTTGTCATCCAGATTCAACTTTCTTTGAGATTTTTATGCAAAGTTTCTGTGGAGAATATGCTATTTGGAACTTGGTTTAATCCTCCATCCTTTTTTTAATTTTATTTTTGTTCCTTTTTTTGGGTATCCAAAGAACCTAGACGATAAATGGGAATGTGAGGTTGCATCGGAAGAATCTCGGCCGGAGAGTAGAGCCAGAGTGTCAAGTCAGCTAGAGTCGTATACGAGCGATGTGTATGGTTGAATAAAGCTTCGTTATTTGATTGTGAAGCTAAAACATTAACTTTCTAGAAGTATAATCAATAATAACCACAATCATACACTTTTTGGAATTGGAA GTAAACAAAGGCAGACACCCAATTCGCTCATCATTTATCTCGTCTTCTTCTTCTTCTTCCTCTTCTCCATTTTTCTTCATTACCGAAGAATTATGAATTACCCCTACGGCTACCAACATCCTCCGCCGGAAACCTACCCTCCTCCCGGGTACCGTCCGCCGCAACCTGGATATCCCGGCCATCAGCCGCTGCCTCCGCCGCCACATCAAGGATATCAAGGGTATTTCTACGATGGTTATTCTCCCTCGGCGCCGCCTCCTCCTCCTCCGCCGGGCCCTCCTCCACCGCCTTATTGTCATCAGCACTATCATTACGATGATCGAAATGACTGTTCCTCCTTCCTTCATGGATGCTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGTTTGGCCTGCTTCCGATAGACCGTGTGTTTTTTTCGGTCTCTTCGGCCGAGATGTGTTCATGTCTTCTATTATTATGAATCGACGACGCCCGTGTTTCGCATCACTTGGAATAAGAACTGCAGTTTCTGAACCTAGACGATAAATGGGAATGTGAGGTTGCATCGGAAGAATCTCGGCCGGAGAGTAGAGCCAGAGTGTCAAGTCAGCTAGAGTCGTATACGAGCGATGTGTATGGTTGAATAAAGCTTCGTTATTTGATTGTGAAGCTAAAACATTAACTTTCTAGAAGTATAATCAATAATAACCACAATCATACACTTTTTGGAATTGGAA ATGAATTACCCCTACGGCTACCAACATCCTCCGCCGGAAACCTACCCTCCTCCCGGGTACCGTCCGCCGCAACCTGGATATCCCGGCCATCAGCCGCTGCCTCCGCCGCCACATCAAGGATATCAAGGGTATTTCTACGATGGTTATTCTCCCTCGGCGCCGCCTCCTCCTCCTCCGCCGGGCCCTCCTCCACCGCCTTATTGTCATCAGCACTATCATTACGATGATCGAAATGACTGTTCCTCCTTCCTTCATGGATGCTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGTTTGGCCTGCTTCCGATAG MNYPYGYQHPPPETYPPPGYRPPQPGYPGHQPLPPPPHQGYQGYFYDGYSPSAPPPPPPPGPPPPPYCHQHYHYDDRNDCSSFLHGCLATLCCCCMLEECLACFR
BLAST of CmaCh14G007540 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.3e-07 Identity = 46/95 (48.42%), Postives = 51/95 (53.68%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TrEMBL
Match: A0A0A0L8F9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G597340 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 2.1e-45 Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TrEMBL
Match: A0A061EES5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_017307 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.9e-17 Identity = 64/132 (48.48%), Postives = 73/132 (55.30%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TrEMBL
Match: A0A061EKS7_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_017307 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 9.1e-17 Identity = 59/99 (59.60%), Postives = 68/99 (68.69%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TrEMBL
Match: D7SVJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01340 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15 Identity = 58/108 (53.70%), Postives = 66/108 (61.11%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TrEMBL
Match: A0A0D2SFL1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G072300 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-15 Identity = 62/123 (50.41%), Postives = 73/123 (59.35%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein) HSP 1 Score: 54.3 bits (129), Expect = 5.3e-08 Identity = 46/95 (48.42%), Postives = 51/95 (53.68%), Query Frame = 1
BLAST of CmaCh14G007540 vs. TAIR10
Match: AT1G12810.2 (AT1G12810.2 proline-rich family protein) HSP 1 Score: 52.0 bits (123), Expect = 2.6e-07 Identity = 57/162 (35.19%), Postives = 66/162 (40.74%), Query Frame = 1
BLAST of CmaCh14G007540 vs. NCBI nr
Match: gi|659098160|ref|XP_008450006.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo]) HSP 1 Score: 198.4 bits (503), Expect = 6.4e-48 Identity = 94/105 (89.52%), Postives = 95/105 (90.48%), Query Frame = 1
BLAST of CmaCh14G007540 vs. NCBI nr
Match: gi|449455918|ref|XP_004145697.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 3.0e-45 Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 1
BLAST of CmaCh14G007540 vs. NCBI nr
Match: gi|1009152145|ref|XP_015893935.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Ziziphus jujuba]) HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24 Identity = 68/105 (64.76%), Postives = 76/105 (72.38%), Query Frame = 1
BLAST of CmaCh14G007540 vs. NCBI nr
Match: gi|590647736|ref|XP_007031981.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 94.7 bits (234), Expect = 1.0e-16 Identity = 64/132 (48.48%), Postives = 73/132 (55.30%), Query Frame = 1
BLAST of CmaCh14G007540 vs. NCBI nr
Match: gi|590647742|ref|XP_007031983.1| (Uncharacterized protein isoform 3 [Theobroma cacao]) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16 Identity = 59/99 (59.60%), Postives = 68/99 (68.69%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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