CmaCh14G001930 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGAATCATACAGAGAGAAGTCACGCCTGGAGCGAGCGTTTCCCGCGCTGTCTTCACTGTCGAAAATGGATGGGCTCAAGCTCATTTTCCTTTTGTCTTCTCCCGCAGGGCGACATCTCGCTTCACATGTGATTCTCTCTCTCGTTTGAGTTTGATTTTTCATTTTTGTCCGTTTTGTTGGGATAAGTTGACGAAATTCTGTGGCGCGGGTTTTAATTGTTCGAGATATGTTCTTGCATCAAGAATTGGATGTAGGAAGCTCCTGCAAGGTCGCTTCCAGCTTGCGCGATTCAGTTGATTTCGCAACATCGATTTCCTATTGAATCTTAAGACTGTTTTAGGGTCTATAGATATCTCCGTACTCTTTTCTTATGCACTATAACGGAGACTAGAAATGCCTCGTTTCTAGGTTGGAGGAACTGATTTTCATTTGTCTAAGTCGGTAACTGCTGGTAATCAACATCTCCTCCTACTATAGTTGAAACGAAGCGTAGTTTGAATTTGGTTCTGGATCCGAGTAGTTAATGTAAATATTGTTAGGTAGATTGGATTCGTTTCATATCCAATATCCATCGCGTTTTCTCCTTTATAATGCAAAAACATTTCAATCTGTTGCTTTGCAAAAGTAGCTGACTAAGTCCTATCGATGCTCCTCTCACTTGTTCTTAGCATCACGTGGAGGAGGGAATTGACGTTCAATTATTTTAACAGGCTATCGGTGATGATCGTGTCATCTTTATTTTGTCTATCGACTTTCAACAGTCCCGGAAGACTTGCGATCAACATGGATTTTACCTAATGCTAAAGGAAAATCGTAAAGTTGTTCTCAAATGTATGAGTGCTGCAATTCAACAGGTAAACACAAATTATTGCGAGAATTTCATTCTCTATTTATCCACTATAAAATACTTTCAGAGTTTCAGCTTAGGATGCTTAACTCGTCTTTAAAGCAGGTAAGGAGGACCAAATGGATGCACAATTTAGAAGACGTCACGAAAATCCTAGTTCGATTGCACAACTATTCAGAATCTATGTTTGCTCTGATGAACTTGAAGGCGTCATATATTGGTACTTGTTAGCTTCTAAAAAATTTATTATGAAGTCCGAAGTTTACTTTAAGGAAATGATGTAGGGTATATTATTTTGGGACATGACAGACAAGCTTGTATCAGTGCGCGTTATTGTTGTTAAAGTTAGCACTCTCAAGCCTTTGGTGATGCAAATGAACCTTGATTGTGCATAGTGTAAAAGCAATATTGATCGCATCTTTCCTGATGGTAAGGTTTCACCTCCGTCATTTGTGAGTTGGATGGGTGTAAAAGCAAAACATTCAATCCCATTCGAACTACTGCTGAAGCAACCGATTCTCAAAAAATACGGTAACTTCTAAATGCTGAATATGCTCTCAATTCATTTTTAGTTTTATTAATTACACCTTCTTCTTGAGTGTATTTTCCGTCATTTTCCTTCTACTGTAAATATTAGATTCTTCTTAAATCTTTCCAGGCTGTAAGAACTCACTAAATCTGATGACCATGAAGAAGGCGGGGTGCCTCGAACTGTAG ATGGACGAATCATACAGAGAGAAGTCACGCCTGGAGCGAGCGTTTCCCGCGCTGTCTTCACTGTCGAAAATGGATGGGCTCAAGCTCATTTTCCTTTTGTCTTCTCCCGCAGGGCGACATCTCGCTTCACATTCCCGGAAGACTTGCGATCAACATGGATTTTACCTAATGCTAAAGGAAAATCGTAAAGTTGTTCTCAAATGTATGAGTGCTGCAATTCAACAGGTAAGGAGGACCAAATGGATGCACAATTTAGAAGACGTCACGAAAATCCTAGTTCGATTGCACAACTATTCAGAATCTATGTTTGCTCTGATGAACTTGAAGGCGTCATATATTGACAAGCTTGTATCAGTGCGCGTTATTGTTGTTAAAGTTTCACCTCCGTCATTTGTGAGTTGGATGGGTGTAAAAGCAAAACATTCAATCCCATTCGAACTACTGCTGAAGCAACCGATTCTCAAAAAATACGGCTGTAAGAACTCACTAAATCTGATGACCATGAAGAAGGCGGGGTGCCTCGAACTGTAG ATGGACGAATCATACAGAGAGAAGTCACGCCTGGAGCGAGCGTTTCCCGCGCTGTCTTCACTGTCGAAAATGGATGGGCTCAAGCTCATTTTCCTTTTGTCTTCTCCCGCAGGGCGACATCTCGCTTCACATTCCCGGAAGACTTGCGATCAACATGGATTTTACCTAATGCTAAAGGAAAATCGTAAAGTTGTTCTCAAATGTATGAGTGCTGCAATTCAACAGGTAAGGAGGACCAAATGGATGCACAATTTAGAAGACGTCACGAAAATCCTAGTTCGATTGCACAACTATTCAGAATCTATGTTTGCTCTGATGAACTTGAAGGCGTCATATATTGACAAGCTTGTATCAGTGCGCGTTATTGTTGTTAAAGTTTCACCTCCGTCATTTGTGAGTTGGATGGGTGTAAAAGCAAAACATTCAATCCCATTCGAACTACTGCTGAAGCAACCGATTCTCAAAAAATACGGCTGTAAGAACTCACTAAATCTGATGACCATGAAGAAGGCGGGGTGCCTCGAACTGTAG MDESYREKSRLERAFPALSSLSKMDGLKLIFLLSSPAGRHLASHSRKTCDQHGFYLMLKENRKVVLKCMSAAIQQVRRTKWMHNLEDVTKILVRLHNYSESMFALMNLKASYIDKLVSVRVIVVKVSPPSFVSWMGVKAKHSIPFELLLKQPILKKYGCKNSLNLMTMKKAGCLEL
BLAST of CmaCh14G001930 vs. Swiss-Prot
Match: MCM8_ARATH (Probable DNA helicase MCM8 OS=Arabidopsis thaliana GN=MCM8 PE=2 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 5.6e-12 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
BLAST of CmaCh14G001930 vs. TrEMBL
Match: A0A0A0LDE1_CUCSA (DNA helicase OS=Cucumis sativus GN=Csa_3G736810 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.9e-31 Identity = 79/117 (67.52%), Postives = 86/117 (73.50%), Query Frame = 1
BLAST of CmaCh14G001930 vs. TrEMBL
Match: W9SLP7_9ROSA (DNA helicase OS=Morus notabilis GN=L484_024451 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17 Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 1
BLAST of CmaCh14G001930 vs. TrEMBL
Match: M5W875_PRUPE (DNA helicase (Fragment) OS=Prunus persica GN=PRUPE_ppa016452mg PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 8.3e-15 Identity = 56/103 (54.37%), Postives = 66/103 (64.08%), Query Frame = 1
BLAST of CmaCh14G001930 vs. TrEMBL
Match: A0A067JYV0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16461 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.4e-14 Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 1
BLAST of CmaCh14G001930 vs. TrEMBL
Match: B9SGR4_RICCO (DNA helicase OS=Ricinus communis GN=RCOM_0819630 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.4e-14 Identity = 56/117 (47.86%), Postives = 67/117 (57.26%), Query Frame = 1
BLAST of CmaCh14G001930 vs. TAIR10
Match: AT3G09660.1 (AT3G09660.1 minichromosome maintenance 8) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
BLAST of CmaCh14G001930 vs. NCBI nr
Match: gi|778683749|ref|XP_011651938.1| (PREDICTED: probable DNA helicase MCM8 isoform X3 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 4.1e-31 Identity = 79/117 (67.52%), Postives = 86/117 (73.50%), Query Frame = 1
BLAST of CmaCh14G001930 vs. NCBI nr
Match: gi|449440379|ref|XP_004137962.1| (PREDICTED: probable DNA helicase MCM8 isoform X1 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 4.1e-31 Identity = 79/117 (67.52%), Postives = 86/117 (73.50%), Query Frame = 1
BLAST of CmaCh14G001930 vs. NCBI nr
Match: gi|778683747|ref|XP_011651937.1| (PREDICTED: probable DNA helicase MCM8 isoform X2 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 4.1e-31 Identity = 79/117 (67.52%), Postives = 86/117 (73.50%), Query Frame = 1
BLAST of CmaCh14G001930 vs. NCBI nr
Match: gi|659083981|ref|XP_008442643.1| (PREDICTED: probable DNA helicase MCM8 isoform X2 [Cucumis melo]) HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29 Identity = 76/117 (64.96%), Postives = 83/117 (70.94%), Query Frame = 1
BLAST of CmaCh14G001930 vs. NCBI nr
Match: gi|659083977|ref|XP_008442641.1| (PREDICTED: probable DNA helicase MCM8 isoform X1 [Cucumis melo]) HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29 Identity = 76/117 (64.96%), Postives = 83/117 (70.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |