CmaCh13G008890 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G008890
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDof zinc finger protein
LocationCma_Chr13 : 7183557 .. 7185058 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAGAGGAACTGAAACAGAGGAACAATGGAGTGACTGTGAAGTGAAGTTTTTGTTTGGCTGCTGGAAACATCTTTTTCTTTCTGCTCTGTTCTTCATTCGTATGGGTCTAACTTCTCTACAAGTCTGCATGGACTCCTCTGATTGGCTGCAGGTAAGAACACCAACCAATTCCCATAATTATCAGAACAGAGCAGAAAACAGAACAGAACAGAGCAAATGTCTCTGTTTTTTGTGACTGTTTTTTTCTTTGGTTTCAGGGCACCATTAACGAGGAGTCTGGCATGGATTCTTCGTCGCTATCAGGGGACATGCTGTCATGTTCAAGGCCGCTGACAGAGAGGAGGCTTAGACCCCCACATGATCAAGCACTGAAATGCCCAAGATGTGACTCAACCCACACCAAATTTTGCTACTACAACAATTACAGCCTCACCCAGCCGCGTTACTTTTGCAAGACATGTCGTAGGTACTGGACCAAAGGCGGCACTCTTCGTAACATCCCTGTCGGTGGTGGCTGTCGAAAGAACAAGAAAGTTGCCACTACAAAGAAATCCAATGACCCACAACACCAACAGCCACAAAATCAACAACCCATCTCCCAAAATCACCACCAAGGCTCTTCTTCTTCTTCTGCCCATCACATTCACAACCCCACTGATCTCCATCTCTCATTTCCCGACCAAGTACAATTCCCTCATTTCAACCATCTCATTGGAACAACCCCAAGTTTCATGGACGCCAAATACACCATTGGAATGCTTGAAAGTCACCACCAGCATCACACTACTCGACCCATTGATTTCATGGACACCAAAATGGACGCCATTGTTGGGAATGCTCATTACCCTACAAACCCAGATCACTTGGCCATGGTTGGTGGGCTAGCTGGAGATCACATCGCCGCCGCCGCCGGCCATACTCTGTCGCCGAGTTTCCATGGCCTTTGCTCCCCTTATGGGCTGTCACTCGATGGGAACACCATAGGACAAGGACTGATGATTCCTTATGATCAGCATGAACCAAATGAGGAGCCAAATGCAATGGATGTGAAACCAAATACAAAGCTTCTGGCTTTGGAATGGCAAGATCAGGGATGTTCAGACAAAGTTGAATCGTATGGATACATAAATGGAATTGGGTCGTCTTGGAATGGGATGATGAATGGATATGGACCATCGACAACGAACCCATTGGTGTAAAATATGTTAGGGAAATGGTACACAATCCAAACGAAATCAACGACTATTTGCCTTGGTTACTATAAGGAGTGTCCAAATGTGGCTATCATAATTAGTGCCTTTTTCTTGCTATCAGTTTCTTCAAAATGCGTCTGATTTTTGCTTTGGCCTTGGGATAGTGTCCGCAAATCCAAGGCTCTCTCTTAGGATTTTCTTGTAATATTGAGGAACCTTATCTAGGGAGTGCTTTTGTGGTATAAACAAAAACAACAAGTGTGATTTGGTGCGTAATTATTATTATTATTATTATTATTATTATTT

mRNA sequence

AAACAGAGGAACTGAAACAGAGGAACAATGGAGTGACTGTGAAGTGAAGTTTTTGTTTGGCTGCTGGAAACATCTTTTTCTTTCTGCTCTGTTCTTCATTCGTATGGGTCTAACTTCTCTACAAGTCTGCATGGACTCCTCTGATTGGCTGCAGGGCACCATTAACGAGGAGTCTGGCATGGATTCTTCGTCGCTATCAGGGGACATGCTGTCATGTTCAAGGCCGCTGACAGAGAGGAGGCTTAGACCCCCACATGATCAAGCACTGAAATGCCCAAGATGTGACTCAACCCACACCAAATTTTGCTACTACAACAATTACAGCCTCACCCAGCCGCGTTACTTTTGCAAGACATGTCGTAGGTACTGGACCAAAGGCGGCACTCTTCGTAACATCCCTGTCGGTGGTGGCTGTCGAAAGAACAAGAAAGTTGCCACTACAAAGAAATCCAATGACCCACAACACCAACAGCCACAAAATCAACAACCCATCTCCCAAAATCACCACCAAGGCTCTTCTTCTTCTTCTGCCCATCACATTCACAACCCCACTGATCTCCATCTCTCATTTCCCGACCAAGTACAATTCCCTCATTTCAACCATCTCATTGGAACAACCCCAAGTTTCATGGACGCCAAATACACCATTGGAATGCTTGAAAGTCACCACCAGCATCACACTACTCGACCCATTGATTTCATGGACACCAAAATGGACGCCATTGTTGGGAATGCTCATTACCCTACAAACCCAGATCACTTGGCCATGGTTGGTGGGCTAGCTGGAGATCACATCGCCGCCGCCGCCGGCCATACTCTGTCGCCGAGTTTCCATGGCCTTTGCTCCCCTTATGGGCTGTCACTCGATGGGAACACCATAGGACAAGGACTGATGATTCCTTATGATCAGCATGAACCAAATGAGGAGCCAAATGCAATGGATGTGAAACCAAATACAAAGCTTCTGGCTTTGGAATGGCAAGATCAGGGATGTTCAGACAAAGTTGAATCGTATGGATACATAAATGGAATTGGGTCGTCTTGGAATGGGATGATGAATGGATATGGACCATCGACAACGAACCCATTGGTGTAAAATATGTTAGGGAAATGGTACACAATCCAAACGAAATCAACGACTATTTGCCTTGGTTACTATAAGGAGTGTCCAAATGTGGCTATCATAATTAGTGCCTTTTTCTTGCTATCAGTTTCTTCAAAATGCGTCTGATTTTTGCTTTGGCCTTGGGATAGTGTCCGCAAATCCAAGGCTCTCTCTTAGGATTTTCTTGTAATATTGAGGAACCTTATCTAGGGAGTGCTTTTGTGGTATAAACAAAAACAACAAGTGTGATTTGGTGCGTAATTATTATTATTATTATTATTATTATTATTT

Coding sequence (CDS)

ATGGGTCTAACTTCTCTACAAGTCTGCATGGACTCCTCTGATTGGCTGCAGGGCACCATTAACGAGGAGTCTGGCATGGATTCTTCGTCGCTATCAGGGGACATGCTGTCATGTTCAAGGCCGCTGACAGAGAGGAGGCTTAGACCCCCACATGATCAAGCACTGAAATGCCCAAGATGTGACTCAACCCACACCAAATTTTGCTACTACAACAATTACAGCCTCACCCAGCCGCGTTACTTTTGCAAGACATGTCGTAGGTACTGGACCAAAGGCGGCACTCTTCGTAACATCCCTGTCGGTGGTGGCTGTCGAAAGAACAAGAAAGTTGCCACTACAAAGAAATCCAATGACCCACAACACCAACAGCCACAAAATCAACAACCCATCTCCCAAAATCACCACCAAGGCTCTTCTTCTTCTTCTGCCCATCACATTCACAACCCCACTGATCTCCATCTCTCATTTCCCGACCAAGTACAATTCCCTCATTTCAACCATCTCATTGGAACAACCCCAAGTTTCATGGACGCCAAATACACCATTGGAATGCTTGAAAGTCACCACCAGCATCACACTACTCGACCCATTGATTTCATGGACACCAAAATGGACGCCATTGTTGGGAATGCTCATTACCCTACAAACCCAGATCACTTGGCCATGGTTGGTGGGCTAGCTGGAGATCACATCGCCGCCGCCGCCGGCCATACTCTGTCGCCGAGTTTCCATGGCCTTTGCTCCCCTTATGGGCTGTCACTCGATGGGAACACCATAGGACAAGGACTGATGATTCCTTATGATCAGCATGAACCAAATGAGGAGCCAAATGCAATGGATGTGAAACCAAATACAAAGCTTCTGGCTTTGGAATGGCAAGATCAGGGATGTTCAGACAAAGTTGAATCGTATGGATACATAAATGGAATTGGGTCGTCTTGGAATGGGATGATGAATGGATATGGACCATCGACAACGAACCCATTGGTGTAA

Protein sequence

MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Homology
[Close]
BLAST of CmaCh13G008890 vs. Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 7.9e-60
Identity = 167/395 (42.28%), Postives = 210/395 (53.16%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINE-----ESGMDSSSLSGDMLSCS-RPLTE---------- 60
           MGLTSLQVCMDS DWLQ + +      +S  +S S +  + +CS RP             
Sbjct: 1   MGLTSLQVCMDS-DWLQESESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAALM 60

Query: 61  ---RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVG 120
              RRLRPPHD   KCPRC+STHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVG
Sbjct: 61  DGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVG 120

Query: 121 GGCRKNKKVATTKKSNDPQH-QQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQV 180
           GGCRKNKK +++  S+     ++P N    + +     + S  ++ H+P          +
Sbjct: 121 GGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSP----------L 180

Query: 181 QFPHFNHLIGT--TPS-----FMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHY 240
            F HF  ++G+  TP      F+++KY  G+L       + RPIDF+D+K D +      
Sbjct: 181 GFSHFGGMMGSYSTPEHGNVGFLESKYG-GLLSQ-----SPRPIDFLDSKFDLM------ 240

Query: 241 PTNPDHLAMVG-GLAGDHIAAAAGHTLSPSFHGLCSPY------GLSLDGNTIGQGLM-- 300
             N D+L MV  G  GDH      H       GL +        G+S  GN  G GLM  
Sbjct: 241 GVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDI 300

Query: 301 --------IPYDQHEPNEEPN------AMDVKPNTKLLALEWQDQGCSDK---------- 331
                     YD H  N + +       MDVKPN KLL+L+WQ   C             
Sbjct: 301 STCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKS 360

[Close]
BLAST of CmaCh13G008890 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-27
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 1 

Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQA+ CPRC+ST+TKFCYYNNYSLTQPRYFCK CRRYWT+GG+LRNIPVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 104 CRKNKKVATTK---KSNDPQHQQPQNQQPISQNHHQGSSSS 142
            RKNK+  ++     +N     QP  ++ +S +HH   S S
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMS 142

[Close]
BLAST of CmaCh13G008890 vs. Swiss-Prot
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.8e-27
Identity = 56/89 (62.92%), Postives = 71/89 (79.78%), Query Frame = 1 

Query: 28  SSSLSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRR 87
           SS  + D  +  +PL+  R  PP +Q+L+CPRCDST+TKFCYYNNYSL+QPRYFCK+CRR
Sbjct: 14  SSCSTQDYQNQKKPLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRR 73

Query: 88  YWTKGGTLRNIPVGGGCRKNKKVATTKKS 117
           YWTKGG LRNIP+GG  RK+K+ ++  KS
Sbjct: 74  YWTKGGILRNIPIGGAYRKHKRSSSATKS 101

[Close]
BLAST of CmaCh13G008890 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.6e-26
Identity = 85/234 (36.32%), Postives = 118/234 (50.43%), Query Frame = 1 

Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQAL CPRC+S +TKFCYYNNYSLTQPRYFCK CRRYWT GG+LRNIPVGGG
Sbjct: 38  ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97

Query: 104 CRKNKKVATTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFP 163
            RKNK+ ++   S+ P      +++P+  N++  + +    H+ NP  +  +   +VQ  
Sbjct: 98  VRKNKRSSSNSSSSSPS-SSSSSKKPLFANNN--TPTPPLPHL-NP-KIGEAAATKVQDL 157

Query: 164 HFNHLIGTTPSFMDAKYTIGM-LESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAM 223
            F+   G      D            H HH++ P +F+     + + N    +    L +
Sbjct: 158 TFSQGFGNAHEVKDLNLAFSQGFGIGHNHHSSIP-EFLQVVPSSSMKNNPLVSTSSSLEL 217

Query: 224 VG------------------GLAGDHIAAAAGHTLS-PSFHGLCSP-YGLSLDG 257
           +G                   +    +  A+G  LS P F     P  G SLDG
Sbjct: 218 LGISSSSASSNSRPAFMSYPNVHDSSVYTASGFGLSYPQFQEFMRPALGFSLDG 265

[Close]
BLAST of CmaCh13G008890 vs. Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.6e-26
Identity = 77/222 (34.68%), Postives = 113/222 (50.90%), Query Frame = 1 

Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP   +ALKCPRCDS +TKFCYYNNYS++QPRYFCK CRRYWT GGTLRN+P+GGG
Sbjct: 49  ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108

Query: 104 CRKNKKVATTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFP 163
           CRKNK  +     +           P+S + +  SS+ S +  H     +++ P      
Sbjct: 109 CRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINK-HMMMVPNMTMPTPTTMG 168

Query: 164 HFNHLIGT-TPSFMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAM 223
            F +++ T  P+     +   M ++ H+  +  P+         ++        P  L M
Sbjct: 169 LFPNVLPTLMPTGGGGGFDFTM-DNQHRSLSFTPMSLPSQGPVPMLAAGGSEATPSFLEM 228

Query: 224 V-GGLAGDHIAAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGL 264
           + GG+     +     T+S   +G+  P+ L   G     GL
Sbjct: 229 LRGGIFHGSSSYNTSLTMSGGNNGMDKPFSLPSYGAMCTNGL 268

[Close]
BLAST of CmaCh13G008890 vs. TrEMBL
Match: B9IES2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s08810g PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.7e-109
Identity = 221/344 (64.24%), Postives = 260/344 (75.58%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGL SLQVCMDSSDWLQGTINEESGMDSSS SGDML+CSRPL ERRLRPPHDQALKCPRC
Sbjct: 1   MGLNSLQVCMDSSDWLQGTINEESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DS HTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV  +KKSND  
Sbjct: 61  DSAHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV--SKKSND-- 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGT-----TPSF 180
                  Q ++Q  + GSSSS     HNPTDLHLSFPDQVQ  H ++++G+      P+F
Sbjct: 121 -------QSVNQ-INTGSSSS-----HNPTDLHLSFPDQVQLSHLHNILGSQETLANPNF 180

Query: 181 MDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVG---NAHYPTNPDHLAMVGGLAGDHIA 240
           M++KY IGMLE+       RP+DFMD+K +A+VG   N  +  N D L MV GL GD   
Sbjct: 181 MESKYNIGMLEN------PRPVDFMDSKFEALVGSSRNYDFMGNGD-LGMVSGL-GD--- 240

Query: 241 AAAGHTLSPSFHGLCSPYGLSLDGNT-----IGQGLMIPYDQHEPNEEPNAMDVKPNTKL 300
            +  H L+P++ G CSP+G+SLDGN+       Q LM+PYDQ   +++ N +DVKPNTKL
Sbjct: 241 MSHHHGLAPNYSGYCSPFGMSLDGNSGSFMETCQRLMLPYDQGNDHDQ-NPIDVKPNTKL 300

Query: 301 LALEWQDQGCSD-KVESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           L+L+WQDQGCSD   +++GY+N +G SW GMMNGYG STTN LV
Sbjct: 301 LSLDWQDQGCSDVGKDTFGYLNNLG-SWTGMMNGYGSSTTNTLV 314

[Close]
BLAST of CmaCh13G008890 vs. TrEMBL
Match: M5WDR0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015648mg PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.2e-108
Identity = 222/347 (63.98%), Postives = 261/347 (75.22%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSS-LSGDMLSCSRPLTERRLRPPHDQALKCPR 60
           MG  SLQVCMDSSDWLQGT++E+S MDSSS LSGDML+CSRPL ERRLRP HDQALKCPR
Sbjct: 1   MGHNSLQVCMDSSDWLQGTMHEDSPMDSSSPLSGDMLTCSRPLIERRLRPQHDQALKCPR 60

Query: 61  CDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDP 120
           CDSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA +KK N+P
Sbjct: 61  CDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA-SKKPNEP 120

Query: 121 QHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLI---GTTPSFM 180
            +       P+  N + GSSSSS    HNPTDLHLSFPDQ+QF H N L+      PSFM
Sbjct: 121 HN-------PL-MNQNAGSSSSSVS--HNPTDLHLSFPDQMQFSHLNGLMLGSNNNPSFM 180

Query: 181 DAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAH---YPTNPDHLAMVGGLAGDHIAA 240
           D++Y  GMLES++ ++  RPIDFM++K++AIVGNA    +  N   L M+GGLA +    
Sbjct: 181 DSRYN-GMLESNN-NNNPRPIDFMESKLEAIVGNARNYDFMGNGADLGMMGGLANNMGGE 240

Query: 241 AAGHTLSPSFHGLCSPYGLS----LDGNTIG--QGLMIPYD---QHEPNEEPNAMDVKPN 300
           ++ H      HGLCSP+G+S     +GN +   Q LM+PYD    H+ +   N MDVKPN
Sbjct: 241 SSFH------HGLCSPFGMSSFDGQNGNFMDTCQRLMLPYDHQASHDQDHHQNGMDVKPN 300

Query: 301 TKLLALEWQDQGCSDK-VESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           TKLL+LEWQDQGCSD   ES+GY+NG+G SW  +MN YGPSTTNPLV
Sbjct: 301 TKLLSLEWQDQGCSDHGKESFGYLNGLG-SWTNVMNNYGPSTTNPLV 327

[Close]
BLAST of CmaCh13G008890 vs. TrEMBL
Match: A0A061FV52_THECC (Dof-type zinc finger DNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_012077 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 4.1e-108
Identity = 220/342 (64.33%), Postives = 259/342 (75.73%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTI+EESGMDSSS SGDML+CSRPL ERRLRPPHDQALKCPRC
Sbjct: 107 MGLTSLQVCMDSSDWLQGTIHEESGMDSSSPSGDMLACSRPLIERRLRPPHDQALKCPRC 166

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA +KKSND  
Sbjct: 167 DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA-SKKSNDQS 226

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGT---TPSFMD 180
                     + +++ GSSS      HNPTDLHLSFP ++   H N+++GT     +FM+
Sbjct: 227 ----------ANSNNPGSSS------HNPTDLHLSFP-EMNLSHLNNMLGTHGANNNFME 286

Query: 181 AKYTIGMLESHHQHHTTRPIDFMDTKMDAIVG---NAHYPTNPDHLAMVGGLAGDHIAAA 240
           +KY   +LE+       RPIDFM++K++AIVG   N  +  N + L MVGGL GD     
Sbjct: 287 SKYN-SLLEN------PRPIDFMESKLEAIVGSSRNYDFMGNGE-LGMVGGL-GD----- 346

Query: 241 AGHTLSPSFHGLCSPYGLSLDGN-----TIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLA 300
            GH L+P+ HGLCSPYG+SLDGN        Q +M+PYD    N + +A+DVKPNTKLL+
Sbjct: 347 MGHGLAPNLHGLCSPYGMSLDGNGGTFLDTCQRIMLPYD---ANADQHAVDVKPNTKLLS 406

Query: 301 LEWQDQGCSDK-VESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           L+WQDQGCSD   ++YGY+N +G SW+GMMN YGPSTTNPLV
Sbjct: 407 LDWQDQGCSDAGKDTYGYLNNLG-SWSGMMNNYGPSTTNPLV 412

[Close]
BLAST of CmaCh13G008890 vs. TrEMBL
Match: A0A061FUJ4_THECC (F-box family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_012077 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 4.1e-108
Identity = 220/342 (64.33%), Postives = 259/342 (75.73%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTI+EESGMDSSS SGDML+CSRPL ERRLRPPHDQALKCPRC
Sbjct: 69  MGLTSLQVCMDSSDWLQGTIHEESGMDSSSPSGDMLACSRPLIERRLRPPHDQALKCPRC 128

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA +KKSND  
Sbjct: 129 DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA-SKKSNDQS 188

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGT---TPSFMD 180
                     + +++ GSSS      HNPTDLHLSFP ++   H N+++GT     +FM+
Sbjct: 189 ----------ANSNNPGSSS------HNPTDLHLSFP-EMNLSHLNNMLGTHGANNNFME 248

Query: 181 AKYTIGMLESHHQHHTTRPIDFMDTKMDAIVG---NAHYPTNPDHLAMVGGLAGDHIAAA 240
           +KY   +LE+       RPIDFM++K++AIVG   N  +  N + L MVGGL GD     
Sbjct: 249 SKYN-SLLEN------PRPIDFMESKLEAIVGSSRNYDFMGNGE-LGMVGGL-GD----- 308

Query: 241 AGHTLSPSFHGLCSPYGLSLDGN-----TIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLA 300
            GH L+P+ HGLCSPYG+SLDGN        Q +M+PYD    N + +A+DVKPNTKLL+
Sbjct: 309 MGHGLAPNLHGLCSPYGMSLDGNGGTFLDTCQRIMLPYD---ANADQHAVDVKPNTKLLS 368

Query: 301 LEWQDQGCSDK-VESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           L+WQDQGCSD   ++YGY+N +G SW+GMMN YGPSTTNPLV
Sbjct: 369 LDWQDQGCSDAGKDTYGYLNNLG-SWSGMMNNYGPSTTNPLV 374

[Close]
BLAST of CmaCh13G008890 vs. TrEMBL
Match: B9I3A6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s08280g PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 9.2e-108
Identity = 223/344 (64.83%), Postives = 259/344 (75.29%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTIN+ESGMDSSS SGDML+CSRPL ERRLRPPHDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINDESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV  +KKSND  
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV--SKKSND-- 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGT-----TPSF 180
                  Q ++Q  + GSSSS     HNPTDLHLSFP +VQ  H N ++G+     T +F
Sbjct: 121 -------QSVNQ-INPGSSSS-----HNPTDLHLSFP-EVQLSHLNSILGSQGTIATSNF 180

Query: 181 MDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVG---NAHYPTNPDHLAMVGGLAGDHIA 240
           MD+KY IGMLE+       RPIDFMD+K++A+VG   N  +  N D L MV GL GD   
Sbjct: 181 MDSKYNIGMLEN------PRPIDFMDSKLEALVGSSRNYDFMGNGD-LGMVSGL-GD--- 240

Query: 241 AAAGHTLSPSFHGLCSPYGLSLDGNT-----IGQGLMIPYDQHEPNEEPNAMDVKPNTKL 300
            +  H L+P+F  +CS +G+SLDGN+       Q LM+PY Q   N + NA+DVKPNTKL
Sbjct: 241 TSHHHGLAPNFSDICSSFGMSLDGNSGTFMETCQRLMLPYGQ--GNNDQNAIDVKPNTKL 300

Query: 301 LALEWQDQGCSD-KVESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           L+L+WQDQGCSD   +++GY+N +G SW GMMNGYG STTN LV
Sbjct: 301 LSLDWQDQGCSDGGKDTFGYLNNLG-SWTGMMNGYGSSTTNTLV 312

[Close]
BLAST of CmaCh13G008890 vs. TAIR10
Match: AT5G62940.1 (AT5G62940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 232.3 bits (591), Expect = 4.4e-61
Identity = 167/395 (42.28%), Postives = 210/395 (53.16%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINE-----ESGMDSSSLSGDMLSCS-RPLTE---------- 60
           MGLTSLQVCMDS DWLQ + +      +S  +S S +  + +CS RP             
Sbjct: 1   MGLTSLQVCMDS-DWLQESESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAALM 60

Query: 61  ---RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVG 120
              RRLRPPHD   KCPRC+STHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVG
Sbjct: 61  DGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVG 120

Query: 121 GGCRKNKKVATTKKSNDPQH-QQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQV 180
           GGCRKNKK +++  S+     ++P N    + +     + S  ++ H+P          +
Sbjct: 121 GGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSP----------L 180

Query: 181 QFPHFNHLIGT--TPS-----FMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHY 240
            F HF  ++G+  TP      F+++KY  G+L       + RPIDF+D+K D +      
Sbjct: 181 GFSHFGGMMGSYSTPEHGNVGFLESKYG-GLLSQ-----SPRPIDFLDSKFDLM------ 240

Query: 241 PTNPDHLAMVG-GLAGDHIAAAAGHTLSPSFHGLCSPY------GLSLDGNTIGQGLM-- 300
             N D+L MV  G  GDH      H       GL +        G+S  GN  G GLM  
Sbjct: 241 GVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDI 300

Query: 301 --------IPYDQHEPNEEPN------AMDVKPNTKLLALEWQDQGCSDK---------- 331
                     YD H  N + +       MDVKPN KLL+L+WQ   C             
Sbjct: 301 STCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKS 360

[Close]
BLAST of CmaCh13G008890 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-29
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 1 

Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQA+ CPRC+ST+TKFCYYNNYSLTQPRYFCK CRRYWT+GG+LRNIPVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 104 CRKNKKVATTK---KSNDPQHQQPQNQQPISQNHHQGSSSS 142
            RKNK+  ++     +N     QP  ++ +S +HH   S S
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMS 142

[Close]
BLAST of CmaCh13G008890 vs. TAIR10
Match: AT3G45610.1 (AT3G45610.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 122.5 bits (306), Expect = 4.9e-28
Identity = 56/89 (62.92%), Postives = 71/89 (79.78%), Query Frame = 1 

Query: 28  SSSLSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRR 87
           SS  + D  +  +PL+  R  PP +Q+L+CPRCDST+TKFCYYNNYSL+QPRYFCK+CRR
Sbjct: 14  SSCSTQDYQNQKKPLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRR 73

Query: 88  YWTKGGTLRNIPVGGGCRKNKKVATTKKS 117
           YWTKGG LRNIP+GG  RK+K+ ++  KS
Sbjct: 74  YWTKGGILRNIPIGGAYRKHKRSSSATKS 101

[Close]
BLAST of CmaCh13G008890 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27
Identity = 85/234 (36.32%), Postives = 118/234 (50.43%), Query Frame = 1 

Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQAL CPRC+S +TKFCYYNNYSLTQPRYFCK CRRYWT GG+LRNIPVGGG
Sbjct: 38  ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97

Query: 104 CRKNKKVATTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFP 163
            RKNK+ ++   S+ P      +++P+  N++  + +    H+ NP  +  +   +VQ  
Sbjct: 98  VRKNKRSSSNSSSSSPS-SSSSSKKPLFANNN--TPTPPLPHL-NP-KIGEAAATKVQDL 157

Query: 164 HFNHLIGTTPSFMDAKYTIGM-LESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAM 223
            F+   G      D            H HH++ P +F+     + + N    +    L +
Sbjct: 158 TFSQGFGNAHEVKDLNLAFSQGFGIGHNHHSSIP-EFLQVVPSSSMKNNPLVSTSSSLEL 217

Query: 224 VG------------------GLAGDHIAAAAGHTLS-PSFHGLCSP-YGLSLDG 257
           +G                   +    +  A+G  LS P F     P  G SLDG
Sbjct: 218 LGISSSSASSNSRPAFMSYPNVHDSSVYTASGFGLSYPQFQEFMRPALGFSLDG 265

[Close]
BLAST of CmaCh13G008890 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 93/284 (32.75%), Postives = 134/284 (47.18%), Query Frame = 1 

Query: 52  DQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 111
           + ALKCPRC+ST+TKFCY+NNYSLTQPR+FCKTCRRYWT+GG LRN+PVGGGCR+N++  
Sbjct: 86  EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145

Query: 112 TTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDL--HLSFPDQVQFPHFNHLI 171
           +   +N+       N    S N    S+  S+H+  N   +   +  P ++  P +NHL 
Sbjct: 146 SNSNNNNNSTATSNNTSFSSGNASTISTILSSHYGGNQESILSQILSPARLMNPTYNHL- 205

Query: 172 GTTPSFMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHY-PTNPDHLAMVGGLAG 231
                        G L S             +TK D  +   +Y   + D  ++  G +G
Sbjct: 206 -------------GDLTS-------------NTKTDNNMSLLNYGGLSQDLRSIHMGASG 265

Query: 232 DHIAAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAM----DVKPN 291
             + +      S S+H   S  G +L+            D   PN   N        +  
Sbjct: 266 GSLMSCVDEWRSASYHQQSSMGGGNLE------------DSSNPNPSANGFYSFESPRIT 325

Query: 292 TKLLALEWQDQGCSDKVESYGY----INGIGSSWNGMMNGYGPS 325
           +  ++     Q  S KVE   Y    +NG  SSWN  ++ +G S
Sbjct: 326 SASISSALASQFSSVKVEDNPYKWVNVNGNCSSWND-LSAFGSS 329

[Close]
BLAST of CmaCh13G008890 vs. NCBI nr
Match: gi|449469537|ref|XP_004152476.1| (PREDICTED: dof zinc finger protein DOF5.6 [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 4.2e-154
Identity = 282/342 (82.46%), Postives = 296/342 (86.55%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGT+NEESGMDSSSLSGDMLSCSRPLTERRLRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSND-- 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV+TTKKSND  
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDSQ 120

Query: 121 PQHQQPQNQQPISQNHH-----QGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTP 180
            Q QQPQ QQPISQNHH       SSSSS HHIHNPTDLHLSFPDQ+QFPHFN L   TP
Sbjct: 121 QQQQQPQIQQPISQNHHLLHGPSSSSSSSLHHIHNPTDLHLSFPDQIQFPHFNPL---TP 180

Query: 181 SFMDAKYTIGMLESHHQHH-TTRPIDFMDTKMDAIVGN--AHYPTNPDHLAMVGGLAGD- 240
           +F     TIGMLE+HH HH  TRPIDFMDTKM+AIVGN   HY TN DHLAMVGGL  D 
Sbjct: 181 NF-----TIGMLETHHHHHQQTRPIDFMDTKMEAIVGNNGHHYTTNTDHLAMVGGLTSDH 240

Query: 241 HIAAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLA 300
           HI AAA    + +FHG+CSPYGLSLDGN I Q +MIPYDQH+ NE+PN MDVKPNTKLLA
Sbjct: 241 HITAAAAAAAATNFHGICSPYGLSLDGNNINQ-MMIPYDQHQQNEDPNGMDVKPNTKLLA 300

Query: 301 LEWQDQ-GCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           LEWQDQ GCS+KVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 LEWQDQGGCSEKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 333

[Close]
BLAST of CmaCh13G008890 vs. NCBI nr
Match: gi|659067246|ref|XP_008438423.1| (PREDICTED: dof zinc finger protein DOF5.6 [Cucumis melo])

HSP 1 Score: 552.4 bits (1422), Expect = 5.5e-154
Identity = 282/343 (82.22%), Postives = 296/343 (86.30%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGT+NEESGMDSSSLSGDMLSCSRPLTERRLRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSND-- 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV+TTKKSND  
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDSQ 120

Query: 121 PQHQQPQNQQPISQNHH-----QGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTP 180
            Q QQPQ QQPISQNHH       SSSSS HHIHNPTDLHLSFPDQ+QFPHFN L   TP
Sbjct: 121 QQQQQPQIQQPISQNHHLLHGPSSSSSSSLHHIHNPTDLHLSFPDQIQFPHFNPL---TP 180

Query: 181 SFMDAKYTIGMLESHHQHH--TTRPIDFMDTKMDAIVGN--AHYPTNPDHLAMVGGLAGD 240
           +F     TIGMLE+HH HH   TRPIDFMDTKM+AIVGN   HY TN DHLAMVGGL  D
Sbjct: 181 NF-----TIGMLETHHHHHHQQTRPIDFMDTKMEAIVGNNGHHYTTNTDHLAMVGGLTSD 240

Query: 241 -HIAAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLL 300
            HI AAA    + +FHG+CSPYGLSLDGN I Q +MIPYDQH+ NE+PN MDVKPNTKLL
Sbjct: 241 HHITAAAAAAAATNFHGICSPYGLSLDGNNINQ-MMIPYDQHQQNEDPNGMDVKPNTKLL 300

Query: 301 ALEWQDQ-GCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           ALEWQDQ GCS+KVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 ALEWQDQGGCSEKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 334

[Close]
BLAST of CmaCh13G008890 vs. NCBI nr
Match: gi|1000984751|ref|XP_015579469.1| (PREDICTED: dof zinc finger protein DOF5.6 [Ricinus communis])

HSP 1 Score: 421.4 bits (1082), Expect = 1.5e-114
Identity = 225/354 (63.56%), Postives = 266/354 (75.14%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           M LTSLQVCMDS+DWLQGTI+EE+GMDSSS SGDML+CSRPL ERRLRPPHDQALKCPRC
Sbjct: 1   MSLTSLQVCMDSTDWLQGTIHEETGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA  KKSN  +
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA--KKSNSNE 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGT-----TPSF 180
           H QP NQ  +         SSS+H  HNPTDLHLSFPDQVQF H N+++ T      P+F
Sbjct: 121 HHQPINQNNL--------GSSSSH--HNPTDLHLSFPDQVQFSHLNNILNTQGTLANPTF 180

Query: 181 MDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPD-----HLAMVGGLAGDH 240
           M++KY+IGMLE+       RPIDFM++K++AIVG++    N D      + MV GL GD 
Sbjct: 181 MESKYSIGMLEN------PRPIDFMESKLEAIVGSSSTSRNYDFMGNSDMGMVSGL-GDQ 240

Query: 241 IAAAAGH-----TLSPSFHGLCSPYGLSLDGNT-----IGQGLMIPYDQHEPNEEPNAMD 300
           I     H      L+P++HGLCSP+G+S+DG+        Q LM+PYD H+ N+E N +D
Sbjct: 241 INHHHHHHHHHQGLAPNYHGLCSPFGMSMDGSNGTFMETCQRLMLPYD-HQGNDEQNTID 300

Query: 301 VKPNTKLLALEWQD--QGCSDK--VESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           VKPN KLL+LEWQ+  QGCS     +++GY+N +GSSW GMMNGYG STTNPLV
Sbjct: 301 VKPNAKLLSLEWQEQGQGCSHDGGKDTFGYLNNLGSSWTGMMNGYGSSTTNPLV 334

[Close]
BLAST of CmaCh13G008890 vs. NCBI nr
Match: gi|224133542|ref|XP_002321600.1| (hypothetical protein POPTR_0015s08810g [Populus trichocarpa])

HSP 1 Score: 404.1 bits (1037), Expect = 2.4e-109
Identity = 221/344 (64.24%), Postives = 260/344 (75.58%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGL SLQVCMDSSDWLQGTINEESGMDSSS SGDML+CSRPL ERRLRPPHDQALKCPRC
Sbjct: 1   MGLNSLQVCMDSSDWLQGTINEESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DS HTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV  +KKSND  
Sbjct: 61  DSAHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV--SKKSND-- 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGT-----TPSF 180
                  Q ++Q  + GSSSS     HNPTDLHLSFPDQVQ  H ++++G+      P+F
Sbjct: 121 -------QSVNQ-INTGSSSS-----HNPTDLHLSFPDQVQLSHLHNILGSQETLANPNF 180

Query: 181 MDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVG---NAHYPTNPDHLAMVGGLAGDHIA 240
           M++KY IGMLE+       RP+DFMD+K +A+VG   N  +  N D L MV GL GD   
Sbjct: 181 MESKYNIGMLEN------PRPVDFMDSKFEALVGSSRNYDFMGNGD-LGMVSGL-GD--- 240

Query: 241 AAAGHTLSPSFHGLCSPYGLSLDGNT-----IGQGLMIPYDQHEPNEEPNAMDVKPNTKL 300
            +  H L+P++ G CSP+G+SLDGN+       Q LM+PYDQ   +++ N +DVKPNTKL
Sbjct: 241 MSHHHGLAPNYSGYCSPFGMSLDGNSGSFMETCQRLMLPYDQGNDHDQ-NPIDVKPNTKL 300

Query: 301 LALEWQDQGCSD-KVESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           L+L+WQDQGCSD   +++GY+N +G SW GMMNGYG STTN LV
Sbjct: 301 LSLDWQDQGCSDVGKDTFGYLNNLG-SWTGMMNGYGSSTTNTLV 314

[Close]
BLAST of CmaCh13G008890 vs. NCBI nr
Match: gi|645268945|ref|XP_008239769.1| (PREDICTED: dof zinc finger protein DOF5.6 [Prunus mume])

HSP 1 Score: 400.6 bits (1028), Expect = 2.7e-108
Identity = 222/347 (63.98%), Postives = 258/347 (74.35%), Query Frame = 1 

Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSS-LSGDMLSCSRPLTERRLRPPHDQALKCPR 60
           MG  SLQVCMDSSDWLQGT+NE+S MDSSS LSGDML+CSRPL ERRLRP HDQALKCPR
Sbjct: 1   MGHNSLQVCMDSSDWLQGTMNEDSPMDSSSPLSGDMLTCSRPLIERRLRPQHDQALKCPR 60

Query: 61  CDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDP 120
           CDSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA+ KK N+P
Sbjct: 61  CDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVAS-KKPNEP 120

Query: 121 QHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLI---GTTPSFM 180
            +           N + GSSSSS  H  NPTDLHLSFPDQ+QF H N L+      PSFM
Sbjct: 121 HNPM--------MNQNAGSSSSSVSH--NPTDLHLSFPDQMQFSHLNGLMLGSNNNPSFM 180

Query: 181 DAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAH---YPTNPDHLAMVGGLAGDHIAA 240
           D++Y  GMLES+  ++  RPIDFM++K++AIVGNA    +  N   L M+GGLA +    
Sbjct: 181 DSRYN-GMLESN--NNNPRPIDFMESKLEAIVGNARNYDFMGNGADLGMMGGLANNMGGE 240

Query: 241 AAGHTLSPSFHGLCSPYGLS----LDGNTIG--QGLMIPYD---QHEPNEEPNAMDVKPN 300
           ++ H      HGLCSP+G+S     +GN +   Q LM+PYD    H+ +   N MDVKPN
Sbjct: 241 SSFH------HGLCSPFGMSSFDGQNGNFMDTCQRLMLPYDHQASHDQDHHQNGMDVKPN 300

Query: 301 TKLLALEWQDQGCSDK-VESYGYINGIGSSWNGMMNGYGPSTTNPLV 331
           TKLL+LEWQDQGCSD   ES+GY+NG+G SW  +MN YGPSTTNPLV
Sbjct: 301 TKLLSLEWQDQGCSDHGKESFGYLNGLG-SWTNVMNNYGPSTTNPLV 326

The following BLAST results are available for this feature:
BLAST of CmaCh13G008890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF56_ARATH7.9e-6042.28Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2[more]
DOF46_ARATH1.0e-2760.40Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
DOF32_ARATH8.8e-2762.92Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1[more]
DOF18_ARATH2.6e-2636.32Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
PBF_MAIZE2.6e-2634.68Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1[more]
BLAST of CmaCh13G008890 vs. TrEMBL
Match NameE-valueIdentityDescription
B9IES2_POPTR1.7e-10964.24Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s08810g PE=4 SV=1[more]
M5WDR0_PRUPE3.2e-10863.98Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015648mg PE=4 SV=1[more]
A0A061FV52_THECC4.1e-10864.33Dof-type zinc finger DNA-binding family protein isoform 1 OS=Theobroma cacao GN=... [more]
A0A061FUJ4_THECC4.1e-10864.33F-box family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_012077 PE=4 ... [more]
B9I3A6_POPTR9.2e-10864.83Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s08280g PE=4 SV=1[more]
BLAST of CmaCh13G008890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62940.14.4e-6142.28 Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.15.8e-2960.40 Dof-type zinc finger DNA-binding family protein[more]
AT3G45610.14.9e-2862.92 Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.11.4e-2736.32 Dof-type zinc finger DNA-binding family protein[more]
AT2G37590.11.2e-2632.75 DNA binding with one finger 2.4[more]
BLAST of CmaCh13G008890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469537|ref|XP_004152476.1|4.2e-15482.46PREDICTED: dof zinc finger protein DOF5.6 [Cucumis sativus][more]
gi|659067246|ref|XP_008438423.1|5.5e-15482.22PREDICTED: dof zinc finger protein DOF5.6 [Cucumis melo][more]
gi|1000984751|ref|XP_015579469.1|1.5e-11463.56PREDICTED: dof zinc finger protein DOF5.6 [Ricinus communis][more]
gi|224133542|ref|XP_002321600.1|2.4e-10964.24hypothetical protein POPTR_0015s08810g [Populus trichocarpa][more]
gi|645268945|ref|XP_008239769.1|2.7e-10863.98PREDICTED: dof zinc finger protein DOF5.6 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009888 tissue development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G008890.1CmaCh13G008890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 45..105
score: 3.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 52..109
score: 1.8
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 57..93
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 55..109
score: 29
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 20..329
score: 3.1E
NoneNo IPR availablePANTHERPTHR31992:SF14SUBFAMILY NOT NAMEDcoord: 20..329
score: 3.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh13G008890Cucsa.098430Cucumber (Gy14) v1cgycmaB0210
CmaCh13G008890Cla000975Watermelon (97103) v1cmawmB200
CmaCh13G008890Csa1G046080Cucumber (Chinese Long) v2cmacuB217
CmaCh13G008890MELO3C002264Melon (DHL92) v3.5.1cmameB193
CmaCh13G008890ClCG01G013150Watermelon (Charleston Gray)cmawcgB187
CmaCh13G008890CSPI01G08490Wild cucumber (PI 183967)cmacpiB218
CmaCh13G008890CmoCh18G001270Cucurbita moschata (Rifu)cmacmoB224
CmaCh13G008890CmoCh13G009180Cucurbita moschata (Rifu)cmacmoB218
CmaCh13G008890Lsi02G003700Bottle gourd (USVL1VR-Ls)cmalsiB208
CmaCh13G008890Cp4.1LG09g10250Cucurbita pepo (Zucchini)cmacpeB213
CmaCh13G008890Cp4.1LG20g02360Cucurbita pepo (Zucchini)cmacpeB234
CmaCh13G008890MELO3C002264.2Melon (DHL92) v3.6.1cmamedB214
CmaCh13G008890CsaV3_1G008490Cucumber (Chinese Long) v3cmacucB0248
CmaCh13G008890Cla97C01G012150Watermelon (97103) v2cmawmbB214
CmaCh13G008890Bhi08G001312Wax gourdcmawgoB0268
CmaCh13G008890CsGy1G008380Cucumber (Gy14) v2cgybcmaB073
CmaCh13G008890Carg07679Silver-seed gourdcarcmaB1393
CmaCh13G008890Carg06725Silver-seed gourdcarcmaB0690
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh13G008890CmaCh18G001670Cucurbita maxima (Rimu)cmacmaB217
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh13G008890Cucurbita maxima (Rimu)cmacmaB089
CmaCh13G008890Cucurbita maxima (Rimu)cmacmaB126
CmaCh13G008890Cucumber (Gy14) v1cgycmaB0582
CmaCh13G008890Cucurbita moschata (Rifu)cmacmoB208
CmaCh13G008890Cucurbita moschata (Rifu)cmacmoB213
CmaCh13G008890Wild cucumber (PI 183967)cmacpiB211
CmaCh13G008890Cucumber (Chinese Long) v2cmacuB209
CmaCh13G008890Melon (DHL92) v3.5.1cmameB209
CmaCh13G008890Watermelon (Charleston Gray)cmawcgB210
CmaCh13G008890Watermelon (97103) v1cmawmB184
CmaCh13G008890Watermelon (97103) v1cmawmB216
CmaCh13G008890Cucurbita pepo (Zucchini)cmacpeB230
CmaCh13G008890Cucurbita pepo (Zucchini)cmacpeB248
CmaCh13G008890Bottle gourd (USVL1VR-Ls)cmalsiB213
CmaCh13G008890Bottle gourd (USVL1VR-Ls)cmalsiB220
CmaCh13G008890Cucumber (Gy14) v2cgybcmaB066
CmaCh13G008890Cucumber (Gy14) v2cgybcmaB305
CmaCh13G008890Melon (DHL92) v3.6.1cmamedB205
CmaCh13G008890Melon (DHL92) v3.6.1cmamedB229
CmaCh13G008890Melon (DHL92) v3.6.1cmamedB231
CmaCh13G008890Silver-seed gourdcarcmaB0359
CmaCh13G008890Cucumber (Chinese Long) v3cmacucB0239
CmaCh13G008890Cucumber (Chinese Long) v3cmacucB0257
CmaCh13G008890Watermelon (97103) v2cmawmbB217
CmaCh13G008890Watermelon (97103) v2cmawmbB242
CmaCh13G008890Watermelon (97103) v2cmawmbB246
CmaCh13G008890Wax gourdcmawgoB0238