CmaCh13G007550 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCGGTTCACCAGCTGTCTTCAAATTCGTCGACCACCATAAAATTGATATCGACGACGGTAAGTTCTACGAAGTTAAATTGTCAACACGAGAACGTGAAGGAGGATCAACACCAACCGACGATCGTTAACGACAAAGCTTCACGTCTCACGATATTTATTCAATGGGCTAGAACTAAACTACACAACTTCCTTTATTTATTTCTTATTGTTATGAATTTGGTTGGTAAACTTTGAATTTTACTTCCGTTCGTCAATTTTTGAATGTCTAAAGTTCCCCGTTTTATTTTTTATTATTATTAATTCGGTCGATAAACTTTCAACTTTAGGTCTATTCGTCTATTTTTTTTTTAATGTCTGAACTTTCAATTTTAGTTTTAAGAAGTTTATCTAACAATATTTTAAATTTTTTTAGGAAGCAAAAATGTATTTTTTTAAAAGTTAACAATAAATTAATTTAAATGGAAGTTTTCATTTATTTTAATTTAGTCTAATGTTTAGGTCAAACTGTTCTTTTTTTTTTTTTTTTTTTTTAAACACCTTTGTTAAACTTGTGAATGTGAACATTTTTTCAGGGAACCAAAGAAGGGACCAGCAGGACCAGCAGCTATGCGATGCTGCAACCAAGGGTGACTGGAAGGCTGCACAGGACATCGAAAAGGAACATAAGGGGATCCTATCGAAGGTAATAAGCAAGGATAGGGAAGAAACAGCTCTCCACATTGCCACCAGATTCAACCAGGCTACTTTCGTGGAGAAGCTGGTTCAAAAACTGAACGTAAAGGACTTGGAAGCCACAAATATATATGGAAACACAGCCCTTTGCATCGCTGCAACATCAGGCGCTGTGGATATTGTTAGACACACTCAAACAACAAAGAGACAACACTTAGAAAAAATAAGCACGGTACATATAGAGAAGAAAAAAAACTAA ATGGTGCCGGTTCACCAGCTGTCTTCAAATTCGTCGACCACCATAAAATTGATATCGACGACGGTAAGTTCTACGAAGTTAAATTGTCAACACGAGAACGTGAAGGAGGATCAACACCAACCGACGATCGTTAACGACAAAGCTTCACGGAACCAAAGAAGGGACCAGCAGGACCAGCAGCTATGCGATGCTGCAACCAAGGGTGACTGGAAGGCTGCACAGGACATCGAAAAGGAACATAAGGGGATCCTATCGAAGGTAATAAGCAAGGATAGGGAAGAAACAGCTCTCCACATTGCCACCAGATTCAACCAGGCTACTTTCGTGGAGAAGCTGGTTCAAAAACTGAACGTAAAGGACTTGGAAGCCACAAATATATATGGAAACACAGCCCTTTGCATCGCTGCAACATCAGGCGCTGTGGATATTGTTAGACACACTCAAACAACAAAGAGACAACACTTAGAAAAAATAAGCACGGTACATATAGAGAAGAAAAAAAACTAA ATGGTGCCGGTTCACCAGCTGTCTTCAAATTCGTCGACCACCATAAAATTGATATCGACGACGGTAAGTTCTACGAAGTTAAATTGTCAACACGAGAACGTGAAGGAGGATCAACACCAACCGACGATCGTTAACGACAAAGCTTCACGGAACCAAAGAAGGGACCAGCAGGACCAGCAGCTATGCGATGCTGCAACCAAGGGTGACTGGAAGGCTGCACAGGACATCGAAAAGGAACATAAGGGGATCCTATCGAAGGTAATAAGCAAGGATAGGGAAGAAACAGCTCTCCACATTGCCACCAGATTCAACCAGGCTACTTTCGTGGAGAAGCTGGTTCAAAAACTGAACGTAAAGGACTTGGAAGCCACAAATATATATGGAAACACAGCCCTTTGCATCGCTGCAACATCAGGCGCTGTGGATATTGTTAGACACACTCAAACAACAAAGAGACAACACTTAGAAAAAATAAGCACGGTACATATAGAGAAGAAAAAAAACTAA MVPVHQLSSNSSTTIKLISTTVSSTKLNCQHENVKEDQHQPTIVNDKASRNQRRDQQDQQLCDAATKGDWKAAQDIEKEHKGILSKVISKDREETALHIATRFNQATFVEKLVQKLNVKDLEATNIYGNTALCIAATSGAVDIVRHTQTTKRQHLEKISTVHIEKKKN
BLAST of CmaCh13G007550 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 1
BLAST of CmaCh13G007550 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.5e-29 Identity = 80/136 (58.82%), Postives = 97/136 (71.32%), Query Frame = 1
BLAST of CmaCh13G007550 vs. TrEMBL
Match: A0A0A0LX18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-18 Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 1
BLAST of CmaCh13G007550 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14 Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 1
BLAST of CmaCh13G007550 vs. TrEMBL
Match: G7IDB9_MEDTR (Ankyrin repeat protein OS=Medicago truncatula GN=MTR_1g113820 PE=4 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.8e-11 Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 1
BLAST of CmaCh13G007550 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein) HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12 Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 1
BLAST of CmaCh13G007550 vs. NCBI nr
Match: gi|778664857|ref|XP_011648419.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 1
BLAST of CmaCh13G007550 vs. NCBI nr
Match: gi|700209406|gb|KGN64502.1| (hypothetical protein Csa_1G062280 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 1
BLAST of CmaCh13G007550 vs. NCBI nr
Match: gi|659067708|ref|XP_008440886.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]) HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29 Identity = 80/136 (58.82%), Postives = 97/136 (71.32%), Query Frame = 1
BLAST of CmaCh13G007550 vs. NCBI nr
Match: gi|307136229|gb|ADN34066.1| (ankyrin repeat family protein [Cucumis melo subsp. melo]) HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29 Identity = 80/136 (58.82%), Postives = 97/136 (71.32%), Query Frame = 1
BLAST of CmaCh13G007550 vs. NCBI nr
Match: gi|778664854|ref|XP_011648417.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20 Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |