CmaCh13G004000 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G004000
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Early nodulin-like protein 2
Location	Cma_Chr13 : 4535755 .. 4537410 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCTCTCTCTTTTCTCCATTAATTCTATTTAAACTCAGAAGGATCGAGAGAGCGCCGTTGCAGAGAGGAATCTTCATCCTTTGATTGAAAGCTTCAGCCGGTAGACATGGCGGCGGCGATGAAGAAGCTGGTGGCAGTTTTCACGGCGGCATTTGTTGCAACCACAGTTGCCGGAGCTCAGACGCATCATATCGTCGGCGGAGACCGGGGATGGGACGTCGATTCGAACATCGATTCTTGGTCGGCCGGAAGGAAATTCAGAGTCGGAGACAAAATCTGTAAGATCCATTCCTTTCGTAACTGTTTTCTTTTTCGGAACCGGCGAGTTTTTCCCCACCGGTACGGAACACAAGGGAAAGTGCCCAATGGAATTATTGCCTCGCATTATTGATCTTTTATCTTTTTTTTTTTTTCTTTTTTTTACTAAATAATAATTTTTTTTTGTTCAAAACATTAAATTTTGTACAAAATATACCATTTTTAAAATTATTATTTTTAAAGAAAAATAATTTAAAGTTTAAAAGTTAAGAACAAGGCGTTTCAAAATTATTATTTGATTAAATTATTTAGAATTTTGGGGAAAAAATGAAATCTAAAAATTTTTATATTCAAATATTTATTAGATGGGAATCACTTTAAAATAATAAATAAATAAATATATATATATATAGCCAATTTTTATTTGTAATAAAGTTGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGTGCAGGGTTCGCATACTCGATGGCACAGGGTAAGATAGTGGAGCTGCAAAGCAAGAAGGAATACGAAGCGTGCGATGTAAGCAACTTCATCAGGATGTACACTGACGGCATAGATATCGTGCCGTTAAACGGAGAGGGAATCCGCTACTTCGCGAGTAGCAAACAAGAAAGCTGCAAAAAGGGCCTGAAACTGCACGTACAAGTGGAAGCCCAAGCCCAAAACCAAGACCAAACCCAACAGAAGGCCCAAATGAAAACGACAGGAGTTGAAACAACGAACGACGTGTCGGACGGTGATTCAGCGGCAGCTCCGCCCACTCCTTCCGCCTCTTCTCCGCCCTTAACTGCCATGTCTTATCTCACTCTCACCTTTTTGCCCTTCACCCTTTACTTATCTTATTGGATCATATGA

mRNA sequence

CATCTCTCTCTTTTCTCCATTAATTCTATTTAAACTCAGAAGGATCGAGAGAGCGCCGTTGCAGAGAGGAATCTTCATCCTTTGATTGAAAGCTTCAGCCGGTAGACATGGCGGCGGCGATGAAGAAGCTGGTGGCAGTTTTCACGGCGGCATTTGTTGCAACCACAGTTGCCGGAGCTCAGACGCATCATATCGTCGGCGGAGACCGGGGATGGGACGTCGATTCGAACATCGATTCTTGGTCGGCCGGAAGGAAATTCAGAGTCGGAGACAAAATCTGGTTCGCATACTCGATGGCACAGGGTAAGATAGTGGAGCTGCAAAGCAAGAAGGAATACGAAGCGTGCGATGTAAGCAACTTCATCAGGATGTACACTGACGGCATAGATATCGTGCCGTTAAACGGAGAGGGAATCCGCTACTTCGCGAGTAGCAAACAAGAAAGCTGCAAAAAGGGCCTGAAACTGCACGTACAAGTGGAAGCCCAAGCCCAAAACCAAGACCAAACCCAACAGAAGGCCCAAATGAAAACGACAGGAGTTGAAACAACGAACGACGTGTCGGACGGTGATTCAGCGGCAGCTCCGCCCACTCCTTCCGCCTCTTCTCCGCCCTTAACTGCCATGTCTTATCTCACTCTCACCTTTTTGCCCTTCACCCTTTACTTATCTTATTGGATCATATGA

Coding sequence (CDS)

ATGGCGGCGGCGATGAAGAAGCTGGTGGCAGTTTTCACGGCGGCATTTGTTGCAACCACAGTTGCCGGAGCTCAGACGCATCATATCGTCGGCGGAGACCGGGGATGGGACGTCGATTCGAACATCGATTCTTGGTCGGCCGGAAGGAAATTCAGAGTCGGAGACAAAATCTGGTTCGCATACTCGATGGCACAGGGTAAGATAGTGGAGCTGCAAAGCAAGAAGGAATACGAAGCGTGCGATGTAAGCAACTTCATCAGGATGTACACTGACGGCATAGATATCGTGCCGTTAAACGGAGAGGGAATCCGCTACTTCGCGAGTAGCAAACAAGAAAGCTGCAAAAAGGGCCTGAAACTGCACGTACAAGTGGAAGCCCAAGCCCAAAACCAAGACCAAACCCAACAGAAGGCCCAAATGAAAACGACAGGAGTTGAAACAACGAACGACGTGTCGGACGGTGATTCAGCGGCAGCTCCGCCCACTCCTTCCGCCTCTTCTCCGCCCTTAACTGCCATGTCTTATCTCACTCTCACCTTTTTGCCCTTCACCCTTTACTTATCTTATTGGATCATATGA

Protein sequence

MAAAMKKLVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAYSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASSPPLTAMSYLTLTFLPFTLYLSYWII

Homology

[Close]

BLAST of CmaCh13G004000 vs. Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 36/108 (33.33%), Postives = 54/108 (50.00%), Query Frame = 1


Query: 26  THHIVGGDRGWDVDSN---IDSWSAGRKFRVGDKIWFAYSMAQGKIVELQSKKEYEACDV 85
           T HIVG + GW V S+      W+AG+ FRVGD + F +      + E+++K+ ++AC  
Sbjct: 3   TVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC-- 62

Query: 86  SNFIRMYTDGIDIVP----LNGEGIRYFASSKQESCKKGLKLHVQVEA 127
            NF+    D     P    L+  G+ YF  +    C  G KL + V A
Sbjct: 63  -NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 107

[Close]

BLAST of CmaCh13G004000 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-08
Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 1


Query: 9   VAVFTAAFVATTVAGAQTHHIVGGDRG-WDVDSN----IDSWSAGRKFRVGDKIWFAYSM 68
           VA+F+  F+ +  A  +    VGG  G W +  +       W+   +F+VGD I F Y  
Sbjct: 14  VAIFSLIFLFSLAAANEV--TVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYES 73

Query: 69  AQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQ 125
            +  ++E+ +K+ Y +C+ +N +  YTDG   V L+  G  YF S     C+KG KL + 
Sbjct: 74  GKDSVLEV-TKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLV 131

[Close]

BLAST of CmaCh13G004000 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 56/178 (31.46%), Postives = 76/178 (42.70%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATTV---AGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKI 60
           M    K  VA  TA  +  T+   A A T+ I      W    +   W+ G+ FRVGD +
Sbjct: 3   MNGLSKMAVAAATALLLVLTIVPGAVAVTYTIE-----WTTGVDYSGWATGKTFRVGDIL 62

Query: 61  WFAYSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKK- 120
            F Y  +    V++  K  Y+ CD S+    ++DG   + L   GI YF  S    C+  
Sbjct: 63  EFKYGSSH--TVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTN 122

Query: 121 -GLKLHVQVEAQAQNQDQTQQKAQMKTTGVETT--NDVSDGDSAAAPPTPSA--SSPP 170
            G+KL V V A +     T       T G  TT  +  S G      PTP A  +SPP
Sbjct: 123 GGMKLAVNVVAGSAGPPATPTPPS-STPGTPTTPESPPSGGSPTPTTPTPGAGSTSPP 172

[Close]

BLAST of CmaCh13G004000 vs. TrEMBL
Match: A0A0A0LVU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186640 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.9e-59
Identity = 130/188 (69.15%), Postives = 143/188 (76.06%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATT---VAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKI 60
           MAA MKKLVAV T AFV  T   VAG +THH+VGGDRGWDVDS+I SWSAGR FRVGDKI
Sbjct: 1   MAAPMKKLVAVLTVAFVLRTAVPVAGMETHHVVGGDRGWDVDSDIGSWSAGRIFRVGDKI 60

Query: 61  WFAYSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKG 120
           WFAYS+AQG IVE+Q K+EYEAC+V+NF RMY+DGIDIV LNGEGIRYFASSK E+CK G
Sbjct: 61  WFAYSVAQGNIVEVQRKEEYEACNVTNFTRMYSDGIDIVSLNGEGIRYFASSKAENCKNG 120

Query: 121 LKLHVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASSPPL----TAM 180
           LKLHVQV+AQAQ Q               T NDV+D DS A PPTPS SSPPL    T +
Sbjct: 121 LKLHVQVQAQAQAQ--------------TTMNDVADNDSEAVPPTPSTSSPPLFTPPTPL 174

Query: 181 SYLTLTFL 182
           SYLTL  L
Sbjct: 181 SYLTLLLL 174

[Close]

BLAST of CmaCh13G004000 vs. TrEMBL
Match: V4TRD1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018260mg PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-37
Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 1


Query: 5   MKKLVAVFTAAF---VATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAY 64
           +K LV + T A    +    A AQ HH+VGGDRGWD  S++ SWSAGR FR GDKIW AY
Sbjct: 7   VKALVMIMTVALSLGLGGQWAAAQVHHVVGGDRGWDSSSDVASWSAGRVFRAGDKIWLAY 66

Query: 65  SMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLH 122
           S AQ  I ELQSK+EYE+CDVSN IRMYTDG+D++PL+GEGIRYFASSK ++CK GL LH
Sbjct: 67  SPAQESIAELQSKEEYESCDVSNPIRMYTDGLDVIPLDGEGIRYFASSKYDNCKNGLTLH 126

[Close]

BLAST of CmaCh13G004000 vs. TrEMBL
Match: A0A061GG76_THECC (Copper binding protein 9, putative OS=Theobroma cacao GN=TCM_030353 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.0e-37
Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFA 60
           MA     +  V  AA +     GAQ HH+VGGDRGWD  S++ SWS+GR FRVGDKIWFA
Sbjct: 1   MAIVKMVMALVIMAASLGGKWVGAQVHHVVGGDRGWDPSSDVASWSSGRSFRVGDKIWFA 60

Query: 61  YSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKL 120
           YS AQ  I+EL+S+ EYE+CDVSN IRMYTDG+D +PL+GEG RYF SSK ESCK GLK+
Sbjct: 61  YSAAQESIIELKSQDEYESCDVSNPIRMYTDGLDGIPLDGEGTRYFVSSKPESCKNGLKV 120

Query: 121 HVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSAS 167
           +V+V        +  + A      + T        +AAAP TPS S
Sbjct: 121 NVEVLPSGTAVTEKPKVAASSENSISTM-------AAAAPTTPSGS 159

[Close]

BLAST of CmaCh13G004000 vs. TrEMBL
Match: A0A0D2TM00_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G182800 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-37
Identity = 87/167 (52.10%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFA 60
           MA     +  V  AA +   +  AQ HH+VGGDRGWD+ S++ SWS+GR FRVGDKIWFA
Sbjct: 1   MAIVNMVMAVVIMAATLGGKLGAAQVHHVVGGDRGWDLSSDVASWSSGRSFRVGDKIWFA 60

Query: 61  YSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKL 120
           Y+ AQ  I E+ S +EYE+CDVSN IRMYTDGID +PL+GEGIRYF S K+ESCK GLKL
Sbjct: 61  YAAAQESIAEVNSPEEYESCDVSNPIRMYTDGIDGIPLDGEGIRYFVSGKEESCKNGLKL 120

Query: 121 HVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASS 168
           HV+V      + +  + A                 +AAAP TPS S+
Sbjct: 121 HVEVMPFGNPEPEKPRVAV----------------AAAAPTTPSGSA 151

[Close]

BLAST of CmaCh13G004000 vs. TrEMBL
Match: F4YAW0_GOSHI (Copper binding protein 1 OS=Gossypium hirsutum GN=BCP1 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-37
Identity = 87/167 (52.10%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFA 60
           MA     +  V  AA +   +  AQ HH+VGGDRGWD+ S++ SWS+GR FRVGDKIWFA
Sbjct: 1   MAIVNMVMAVVIMAATLGGKLGAAQVHHVVGGDRGWDLSSDVASWSSGRSFRVGDKIWFA 60

Query: 61  YSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKL 120
           Y+ AQ  I E+ S +EYE+CDVSN IRMYTDGID +PL+GEGIRYF S K+ESCK GLKL
Sbjct: 61  YAAAQESIAEVNSPEEYESCDVSNPIRMYTDGIDGIPLDGEGIRYFVSGKEESCKNGLKL 120

Query: 121 HVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASS 168
           HV+V      + +  + A                 +AAAP TPS S+
Sbjct: 121 HVEVMPFGNPEPEKPRVAV----------------AAAAPTTPSGSA 151

[Close]

BLAST of CmaCh13G004000 vs. TAIR10
Match: AT3G27200.1 (AT3G27200.1 Cupredoxin superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 5.6e-16
Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1


Query: 8   LVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAYSMAQGK 67
           ++ VF+      T   A+  H++GG +GW+   + DSWS+ + F+VGD+I F YS     
Sbjct: 8   VILVFSGLLSVKTALAAR--HVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELH-S 67

Query: 68  IVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQVEAQ 127
           +VEL S+  Y++CD+   +   + G D+V L+  G RYFA      C++G+K+ V V + 
Sbjct: 68  VVELGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVNVVS- 127

Query: 128 AQNQDQTQQKAQMKTTGVETTNDVSDGDSAAA 160
                 +  K+    +G  + +D   G  +++
Sbjct: 128 ------SDSKSASSPSGSGSGSDSGSGSGSSS 149

[Close]

BLAST of CmaCh13G004000 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1


Query: 8   LVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAYSMAQGK 67
           +++V     +  TVA   T H +GG  GW V +++ +W+AG+ F VGD + F+Y  A   
Sbjct: 9   IISVLATTLIGLTVA---TDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHD 68

Query: 68  IVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQV 125
           +VE+ +K E+++C     +  + +G  +VPL   G RYF       C +G+KL V V
Sbjct: 69  VVEV-TKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNV 121

[Close]

BLAST of CmaCh13G004000 vs. TAIR10
Match: AT5G07475.1 (AT5G07475.1 Cupredoxin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 1


Query: 26  THHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAYSMAQGKIVELQSKKEYEACDVSNF 85
           T + VG   GWD+ S+++SW++G++F  GD + F YS      V   +K  Y+ C+ ++ 
Sbjct: 28  TTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYSSTHS--VYEVAKDNYQNCNTTDA 87

Query: 86  IRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQVEAQAQNQ 132
           IR +T+G   V L+  G R+F    +  C  G++L V VE    +Q
Sbjct: 88  IRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNVEGNGPSQ 131

[Close]

BLAST of CmaCh13G004000 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 9.9e-13
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 1


Query: 26  THHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAYSMAQGKIVELQSKKEYEACDVSNF 85
           T HIVG   GW++ +N  +W+ GR+F VGD + F Y   Q  ++++ S   Y  C + N+
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNS-TAYTDCGLDNY 66

Query: 86  IRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQV 125
             ++T G D + L+  G  +F     + C  G KL + V
Sbjct: 67  TTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104

[Close]

BLAST of CmaCh13G004000 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 47/169 (27.81%), Postives = 77/169 (45.56%), Query Frame = 1


Query: 12  FTAAFVATTVAGAQ---THHIVGGDRGWD-VDSNIDSWSAGRKFRVGDKIWFAYSMAQGK 71
           FT+  +  T+ G     T H VG  +GW  +  + ++W++ R F+VGD + FAY+     
Sbjct: 10  FTSLLIFVTLFGVAVGGTVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHD 69

Query: 72  IVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLHVQVEAQ 131
           + E+ +  ++E C+ S  +R Y  G D + L   G+++F       CKKG KL + V   
Sbjct: 70  VTEV-THNDFEMCESSKPLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHV--- 129

Query: 132 AQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAP-PTPSASSPPLTAMSY 176
                     A +    V     V    S+++P P+P    P   A  Y
Sbjct: 130 --------LPASLGHVAVPVPGPVRSQSSSSSPSPSPLVDPPVNNAPQY 166

[Close]

BLAST of CmaCh13G004000 vs. NCBI nr
Match: gi|659118102|ref|XP_008458947.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 4.1e-61
Identity = 131/182 (71.98%), Postives = 142/182 (78.02%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATT---VAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKI 60
           MA AMKKLVAV T AFV  T   VA  +THH+VGGDRGWDVDS+I SWSAGR FRVGDKI
Sbjct: 1   MAVAMKKLVAVLTVAFVLRTAVPVAEVETHHVVGGDRGWDVDSDIGSWSAGRTFRVGDKI 60

Query: 61  WFAYSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKG 120
           WFAYS+A G IVELQSK+EYEAC+VSN +RMY+DGIDIV LNGEGIRYFASSK E+CKKG
Sbjct: 61  WFAYSVAHGNIVELQSKEEYEACNVSNSMRMYSDGIDIVALNGEGIRYFASSKAENCKKG 120

Query: 121 LKLHVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASSPPLTAMSYLT 180
           LKLHVQV+ QAQ Q               TTNDVSD DS A PPTPS SSPP T +SYLT
Sbjct: 121 LKLHVQVQGQAQAQ---------------TTNDVSDNDSEAVPPTPSTSSPPFTPLSYLT 167

[Close]

BLAST of CmaCh13G004000 vs. NCBI nr
Match: gi|449443558|ref|XP_004139544.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 130/188 (69.15%), Postives = 143/188 (76.06%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATT---VAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKI 60
           MAA MKKLVAV T AFV  T   VAG +THH+VGGDRGWDVDS+I SWSAGR FRVGDKI
Sbjct: 1   MAAPMKKLVAVLTVAFVLRTAVPVAGMETHHVVGGDRGWDVDSDIGSWSAGRIFRVGDKI 60

Query: 61  WFAYSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKG 120
           WFAYS+AQG IVE+Q K+EYEAC+V+NF RMY+DGIDIV LNGEGIRYFASSK E+CK G
Sbjct: 61  WFAYSVAQGNIVEVQRKEEYEACNVTNFTRMYSDGIDIVSLNGEGIRYFASSKAENCKNG 120

Query: 121 LKLHVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASSPPL----TAM 180
           LKLHVQV+AQAQ Q               T NDV+D DS A PPTPS SSPPL    T +
Sbjct: 121 LKLHVQVQAQAQAQ--------------TTMNDVADNDSEAVPPTPSTSSPPLFTPPTPL 174

Query: 181 SYLTLTFL 182
           SYLTL  L
Sbjct: 181 SYLTLLLL 174

[Close]

BLAST of CmaCh13G004000 vs. NCBI nr
Match: gi|567915079|ref|XP_006449853.1| (hypothetical protein CICLE_v10018260mg, partial [Citrus clementina])

HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37
Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 1


Query: 5   MKKLVAVFTAAF---VATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFAY 64
           +K LV + T A    +    A AQ HH+VGGDRGWD  S++ SWSAGR FR GDKIW AY
Sbjct: 7   VKALVMIMTVALSLGLGGQWAAAQVHHVVGGDRGWDSSSDVASWSAGRVFRAGDKIWLAY 66

Query: 65  SMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKLH 122
           S AQ  I ELQSK+EYE+CDVSN IRMYTDG+D++PL+GEGIRYFASSK ++CK GL LH
Sbjct: 67  SPAQESIAELQSKEEYESCDVSNPIRMYTDGLDVIPLDGEGIRYFASSKYDNCKNGLTLH 126

[Close]

BLAST of CmaCh13G004000 vs. NCBI nr
Match: gi|590626739|ref|XP_007026253.1| (Copper binding protein 9, putative [Theobroma cacao])

HSP 1 Score: 162.5 bits (410), Expect = 7.1e-37
Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFA 60
           MA     +  V  AA +     GAQ HH+VGGDRGWD  S++ SWS+GR FRVGDKIWFA
Sbjct: 1   MAIVKMVMALVIMAASLGGKWVGAQVHHVVGGDRGWDPSSDVASWSSGRSFRVGDKIWFA 60

Query: 61  YSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKL 120
           YS AQ  I+EL+S+ EYE+CDVSN IRMYTDG+D +PL+GEG RYF SSK ESCK GLK+
Sbjct: 61  YSAAQESIIELKSQDEYESCDVSNPIRMYTDGLDGIPLDGEGTRYFVSSKPESCKNGLKV 120

Query: 121 HVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSAS 167
           +V+V        +  + A      + T        +AAAP TPS S
Sbjct: 121 NVEVLPSGTAVTEKPKVAASSENSISTM-------AAAAPTTPSGS 159

[Close]

BLAST of CmaCh13G004000 vs. NCBI nr
Match: gi|823223064|ref|XP_012444261.1| (PREDICTED: mavicyanin-like [Gossypium raimondii])

HSP 1 Score: 162.2 bits (409), Expect = 9.3e-37
Identity = 87/167 (52.10%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 1   MAAAMKKLVAVFTAAFVATTVAGAQTHHIVGGDRGWDVDSNIDSWSAGRKFRVGDKIWFA 60
           MA     +  V  AA +   +  AQ HH+VGGDRGWD+ S++ SWS+GR FRVGDKIWFA
Sbjct: 1   MAIVNMVMAVVIMAATLGGKLGAAQVHHVVGGDRGWDLSSDVASWSSGRSFRVGDKIWFA 60

Query: 61  YSMAQGKIVELQSKKEYEACDVSNFIRMYTDGIDIVPLNGEGIRYFASSKQESCKKGLKL 120
           Y+ AQ  I E+ S +EYE+CDVSN IRMYTDGID +PL+GEGIRYF S K+ESCK GLKL
Sbjct: 61  YAAAQESIAEVNSPEEYESCDVSNPIRMYTDGIDGIPLDGEGIRYFVSGKEESCKNGLKL 120

Query: 121 HVQVEAQAQNQDQTQQKAQMKTTGVETTNDVSDGDSAAAPPTPSASS 168
           HV+V      + +  + A                 +AAAP TPS S+
Sbjct: 121 HVEVMPFGNPEPEKPRVAV----------------AAAAPTTPSGSA 151

The following BLAST results are available for this feature:

BLAST of CmaCh13G004000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CPC_CUCSA	1.1e-08	33.33	Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3	[more]
ENL1_ARATH	3.1e-08	32.23	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	[more]
BCB2_ARATH	1.7e-06	31.46	Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1	[more]

BLAST of CmaCh13G004000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVU0_CUCSA	7.9e-59	69.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186640 PE=4 SV=1	[more]
V4TRD1_9ROSI	2.9e-37	65.00	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018260mg PE=...	[more]
A0A061GG76_THECC	5.0e-37	53.01	Copper binding protein 9, putative OS=Theobroma cacao GN=TCM_030353 PE=4 SV=1	[more]
A0A0D2TM00_GOSRA	6.5e-37	52.10	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G182800 PE=4 SV=1	[more]
F4YAW0_GOSHI	6.5e-37	52.10	Copper binding protein 1 OS=Gossypium hirsutum GN=BCP1 PE=2 SV=1	[more]

BLAST of CmaCh13G004000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27200.1	5.6e-16	30.26	Cupredoxin superfamily protein	[more]
AT2G32300.1	2.8e-15	34.19	uclacyanin 1	[more]
AT5G07475.1	1.2e-13	33.96	Cupredoxin superfamily protein	[more]
AT3G17675.1	9.9e-13	33.33	Cupredoxin superfamily protein	[more]
AT2G26720.1	1.2e-10	27.81	Cupredoxin superfamily protein	[more]

BLAST of CmaCh13G004000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118102\|ref\|XP_008458947.1\|	4.1e-61	71.98	PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo]	[more]
gi\|449443558\|ref\|XP_004139544.1\|	1.1e-58	69.15	PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus]	[more]
gi\|567915079\|ref\|XP_006449853.1\|	4.2e-37	65.00	hypothetical protein CICLE_v10018260mg, partial [Citrus clementina]	[more]
gi\|590626739\|ref\|XP_007026253.1\|	7.1e-37	53.01	Copper binding protein 9, putative [Theobroma cacao]	[more]
gi\|823223064\|ref\|XP_012444261.1\|	9.3e-37	52.10	PREDICTED: mavicyanin-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G004000.1	CmaCh13G004000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 59..122 score: 2.
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 38..117 score: 8.5
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 26..126 score: 3
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 25..127 score: 2.5
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 26..124 score: 3.89
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 1..192 score: 2.0
None	No IPR available	PANTHER	PTHR33021:SF31	SUBFAMILY NOT NAMED	coord: 1..192 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G004000	Cla009007	Watermelon (97103) v1	cmawmB205
CmaCh13G004000	Csa1G186640	Cucumber (Chinese Long) v2	cmacuB210
CmaCh13G004000	MELO3C021681	Melon (DHL92) v3.5.1	cmameB192
CmaCh13G004000	ClCG01G010260	Watermelon (Charleston Gray)	cmawcgB186
CmaCh13G004000	CSPI01G15990	Wild cucumber (PI 183967)	cmacpiB212
CmaCh13G004000	Lsi02G011070	Bottle gourd (USVL1VR-Ls)	cmalsiB206
CmaCh13G004000	Cp4.1LG20g06510	Cucurbita pepo (Zucchini)	cmacpeB234
CmaCh13G004000	MELO3C021681.2	Melon (DHL92) v3.6.1	cmamedB213
CmaCh13G004000	CsaV3_1G017220	Cucumber (Chinese Long) v3	cmacucB0241
CmaCh13G004000	Cla97C01G010220	Watermelon (97103) v2	cmawmbB213
CmaCh13G004000	Bhi08G000642	Wax gourd	cmawgoB0260
CmaCh13G004000	CsGy1G015610	Cucumber (Gy14) v2	cgybcmaB068
CmaCh13G004000	Carg25128	Silver-seed gourd	carcmaB1435

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G004000	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G004000	Cucurbita moschata (Rifu)	cmacmoB222
CmaCh13G004000	Cucurbita moschata (Rifu)	cmacmoB223
CmaCh13G004000	Watermelon (97103) v1	cmawmB197
CmaCh13G004000	Cucurbita pepo (Zucchini)	cmacpeB212
CmaCh13G004000	Cucurbita pepo (Zucchini)	cmacpeB218
CmaCh13G004000	Bottle gourd (USVL1VR-Ls)	cmalsiB207
CmaCh13G004000	Cucumber (Gy14) v2	cgybcmaB724
CmaCh13G004000	Silver-seed gourd	carcmaB0559
CmaCh13G004000	Wax gourd	cmawgoB0253
CmaCh13G004000	Wax gourd	cmawgoB0276
CmaCh13G004000	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh13G004000	Cucurbita maxima (Rimu)	cmacmaB233