CSPI01G15990 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGACATGTGTTTAAGAGGTGGGAGGTTAATCTCTCATCTTTATGTTCTATAAGGGATAGAAAAATAGAATTGGAATTTCACCTTTACTAAAGCAAAGCAAAGCAAAGCAAGCGATTCTCTCTCTCCAAAAAAAAAAAAATAATAACTCTCTTTTTTTAAATTCTCATCTCTTTTTCTCTTTTTCTCCATTTATTTTGTTCAAACTCCGAGCAATTGGAGAGAGCGCCTTGAAGAGAGTACTTTTCATATTAGATTAAAAGCTTCAGCCCCTGGGCATGGCAGCGGCGATGAAGAAGCTTGTGGCGGTTCTTACAGTGGCATTTGTTTTGCGAACAGCGGTACCGGTTGCCGGAATGGAAACGCACCATGTGGTTGGCGGCGACAGAGGATGGGACGTCGATTCGGACATCGGCTCTTGGTCGGCCGGAAGAATATTCAGAGTGGGAGACAAAATTTGTAAGATCCATTTGTTTTGTTTATGCGTTTTATTTTCCTGAGTTTGGATTCCCGGAAAATGGAAATCGGAAACAATGGGAAAGTGACAAATGGAATTATTGAACTTTTTCTCTTTCTTTTATTTATCAAGGATTATTTTCCTTTTAAATACCATTTTAAGTTAAAAGAAAAATTAGAAAGTTTAAGAACCATTTGAATTTAAAAATTGAAATTTTCAGCATAGTTTAATTTAGATTTGAAATTTTGAGTGAATTATGTGCAATAAAGTTGAGTGGTGGTGGTGGGGATGGTGGGTGGGGTGCAGGGTTCGCATACTCTGTGGCACAGGGTAACATAGTGGAGGTGCAAAGGAAAGAGGAATATGAAGCGTGCAATGTAACCAATTTCACGAGGATGTATAGTGACGGCATAGACATCGTGTCCTTAAATGGAGAAGGAATTCGGTACTTCGCTAGTAGCAAAGCCGAGAACTGCAAAAAGGGCTTAAAACTTCACGTACAAGTGCAAGCCCAGGCCCAAGCCCAAGCCCAAACCACTATGAACGACGTGGCAGATAATGATTCGGAGGCAGTTCCACCTACTCCTTCAACCTCTTCTCCACCACTCTTCACTCCCCCCACCCCCCTTTCTTATCTCACTCTTTTGCTTCTTGCCCATGCCTTTACTTAATTAATTGCTGCATTACATAAACATGTTGTTTCCTTTTAATAAAATCAACTCTTCTACTTCTACTTTTACGCCA ATGGCAGCGGCGATGAAGAAGCTTGTGGCGGTTCTTACAGTGGCATTTGTTTTGCGAACAGCGGTACCGGTTGCCGGAATGGAAACGCACCATGTGGTTGGCGGCGACAGAGGATGGGACGTCGATTCGGACATCGGCTCTTGGTCGGCCGGAAGAATATTCAGAGTGGGAGACAAAATTTGGTTCGCATACTCTGTGGCACAGGGTAACATAGTGGAGGTGCAAAGGAAAGAGGAATATGAAGCGTGCAATGTAACCAATTTCACGAGGATGTATAGTGACGGCATAGACATCGTGTCCTTAAATGGAGAAGGAATTCGGTACTTCGCTAGTAGCAAAGCCGAGAACTGCAAAAAGGGCTTAAAACTTCACGTACAAGTGCAAGCCCAGGCCCAAGCCCAAGCCCAAACCACTATGAACGACGTGGCAGATAATGATTCGGAGGCAGTTCCACCTACTCCTTCAACCTCTTCTCCACCACTCTTCACTCCCCCCACCCCCCTTTCTTATCTCACTCTTTTGCTTCTTGCCCATGCCTTTACTTAA ATGGCAGCGGCGATGAAGAAGCTTGTGGCGGTTCTTACAGTGGCATTTGTTTTGCGAACAGCGGTACCGGTTGCCGGAATGGAAACGCACCATGTGGTTGGCGGCGACAGAGGATGGGACGTCGATTCGGACATCGGCTCTTGGTCGGCCGGAAGAATATTCAGAGTGGGAGACAAAATTTGGTTCGCATACTCTGTGGCACAGGGTAACATAGTGGAGGTGCAAAGGAAAGAGGAATATGAAGCGTGCAATGTAACCAATTTCACGAGGATGTATAGTGACGGCATAGACATCGTGTCCTTAAATGGAGAAGGAATTCGGTACTTCGCTAGTAGCAAAGCCGAGAACTGCAAAAAGGGCTTAAAACTTCACGTACAAGTGCAAGCCCAGGCCCAAGCCCAAGCCCAAACCACTATGAACGACGTGGCAGATAATGATTCGGAGGCAGTTCCACCTACTCCTTCAACCTCTTCTCCACCACTCTTCACTCCCCCCACCCCCCTTTCTTATCTCACTCTTTTGCTTCTTGCCCATGCCTTTACTTAA
BLAST of CSPI01G15990 vs. Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11 Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 1
BLAST of CSPI01G15990 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10 Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 1
BLAST of CSPI01G15990 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09 Identity = 51/169 (30.18%), Postives = 74/169 (43.79%), Query Frame = 1
BLAST of CSPI01G15990 vs. TrEMBL
Match: A0A0A0LVU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186640 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 9.6e-91 Identity = 177/181 (97.79%), Postives = 177/181 (97.79%), Query Frame = 1
BLAST of CSPI01G15990 vs. TrEMBL
Match: V4TRD1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018260mg PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.0e-37 Identity = 75/120 (62.50%), Postives = 92/120 (76.67%), Query Frame = 1
BLAST of CSPI01G15990 vs. TrEMBL
Match: A0A067GID4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030047mg PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.0e-36 Identity = 83/156 (53.21%), Postives = 103/156 (66.03%), Query Frame = 1
BLAST of CSPI01G15990 vs. TrEMBL
Match: A0A067KW67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03951 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35 Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 1
BLAST of CSPI01G15990 vs. TrEMBL
Match: A0A0B0P9F0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28880 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.7e-34 Identity = 84/156 (53.85%), Postives = 106/156 (67.95%), Query Frame = 1
BLAST of CSPI01G15990 vs. TAIR10
Match: AT5G07475.1 (AT5G07475.1 Cupredoxin superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 8.5e-14 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 1
BLAST of CSPI01G15990 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1) HSP 1 Score: 74.3 bits (181), Expect = 8.5e-14 Identity = 48/163 (29.45%), Postives = 76/163 (46.63%), Query Frame = 1
BLAST of CSPI01G15990 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12 Identity = 50/166 (30.12%), Postives = 77/166 (46.39%), Query Frame = 1
BLAST of CSPI01G15990 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 4.7e-12 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 1
BLAST of CSPI01G15990 vs. TAIR10
Match: AT4G27520.1 (AT4G27520.1 early nodulin-like protein 2) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-11 Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 1
BLAST of CSPI01G15990 vs. NCBI nr
Match: gi|449443558|ref|XP_004139544.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus]) HSP 1 Score: 340.9 bits (873), Expect = 1.4e-90 Identity = 177/181 (97.79%), Postives = 177/181 (97.79%), Query Frame = 1
BLAST of CSPI01G15990 vs. NCBI nr
Match: gi|659118102|ref|XP_008458947.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo]) HSP 1 Score: 288.5 bits (737), Expect = 8.1e-75 Identity = 156/183 (85.25%), Postives = 161/183 (87.98%), Query Frame = 1
BLAST of CSPI01G15990 vs. NCBI nr
Match: gi|567915079|ref|XP_006449853.1| (hypothetical protein CICLE_v10018260mg, partial [Citrus clementina]) HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36 Identity = 75/120 (62.50%), Postives = 92/120 (76.67%), Query Frame = 1
BLAST of CSPI01G15990 vs. NCBI nr
Match: gi|568825957|ref|XP_006467342.1| (PREDICTED: mavicyanin [Citrus sinensis]) HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36 Identity = 83/156 (53.21%), Postives = 103/156 (66.03%), Query Frame = 1
BLAST of CSPI01G15990 vs. NCBI nr
Match: gi|694309093|ref|XP_009354404.1| (PREDICTED: early nodulin-like protein 2 [Pyrus x bretschneideri]) HSP 1 Score: 159.5 bits (402), Expect = 5.7e-36 Identity = 83/163 (50.92%), Postives = 112/163 (68.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|