CmaCh13G003280 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATTATTAGTGAAACTACTAAATTGCCCTTTCGTGAACCGAAGCTGATAGAAGCCTGTCTTACTTGGTTTGTTCAAATCCGCAGTTTAGGAGAGGAGAGTTGAATGTCTGAGAAAACGAGCCAGAGGCGAATTTCGACTCTCAGTTGAATTTCCATTCCCGAGATTTTTCATCTTTGTTGCTTAATTTTGAAGCTAGATCGATTCATTGTTGATTCTTGTAGGTTTTTGTTGTTTCTCTGTGTGTGTGTGTGTGTCTGTGCGTTCTTGCGCTCTCTTCTATGACGGATCTCAAGTCAACCTTTCTCAACGTCTACTCGGTTCTGAAGGCTGAGCTTCTTCAGGACCCTGCGTTTGAGTATACGGATGTTTCTCGCCAATGGATCGAGCGGGTAACGTCTTTGATTCTTCTCCATTTCTTTTGAGTTCTTCATGCTCTGTTCTTCTACTTAGTTTGTGCTTGAAATCTCTGTCTTGTCTCTTATTTTTGAACGCTTAAGCTCTGGTGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTATGTTAACATACTGAAGCTTAGTTCATATTTGTACGGCATTATGAGTGTGTGAGACTGATGTCAATTTGACGAGATGAAAATCGCTTCCTCGGTTTTCATCTTCTTCTTCACTTTAATCCTTTAATGTGACTGATTCGCTCTGTTCTTGATTACGATAAGTCAACTCATCTGAATAAGCGAATGCTATTTATTTAATTTCTGGAATTTTGAACTCTTTTAAGAACTGGCTTAGAAACTTGTGGAGGTATTTCAGATATCGTTAGCATCGGTGAAAATACAAGATTGGTATCATTTGAATCCCTTGAATGTCATTCCCTTTCACCTGCTGCGTTGGCCTAAACATATGAGATTTGATATATTATTCTACCCAATCAGCTTCAGTATACCTCGTCTTTGTGTCATCAATCTATGTGGTTTCCATTTAACAATTGATTTTAGTTTATCTTTTGATTGTTTACTGTTCTCTTGGTCCTTTACAGATGCTGGATTACAATGTGCCTGGAGGTGGGATTTAATAGCTCGAAAGATTCTTGCATTCGTTGATCATATAATTGGGCATATCAGATTATTGATGGATATTTTGATGAGTAAGTAAGCTGAATCCCTAACTGAAAATGGTTTTTCCTGCAGGAAAGCTTAACCGAGGGCTCTCGGTTATCGATAGCTACAGATTATTGAAAGAATGGAAGGAATTGACTGAAGATGAGATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGGTAAGACGTAGCAATAAACTCTTCTTATTAGCCTACTTGGAGGAATGATAAGCAAGATGATATCCATATCCTTATGAATTTTCTCAAATCTCTGCAGCTCCAAGCGTATTTTCTTGTTCTCGATGATATTATGGACAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTTGTGTCTAGGAAACAACATATAGCATTCTTCAATCTTTAATTGTTATTGCACTATCCAACTGAACTGTCTAAACCTGGTCTTGGTAGGTTGGGATGATTGCAGTTAACGATGGAGTTCTACTTCGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTTGATTTGTTTAACGAGGTGATTTCTTGGCAAGGACTAGCATGGATTTATTCCAACCATGTTCTGCTAACAATCATGTTTTTCATGTTCAAATAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCTTTGTCACTGTAAGTTTCAATTTTCAATCCCTTTTTTGGCTTCCTTTTGACTGGCACAAAAAGTTACAATGGTATATGCCATACCATATATGTGAAAAAACCAAGTAAACCACGAACTTTATTTGGTCTTTTAAACTTCAAATCAAAACAATAAGAATAAATCATCCCCCTTATATATTCCGTATATTAATTCTTGCAGTCATCGGCGCATTGTACAGTACAAGACTGCCTACTATTCTTTTTACCTACCAGTGAGTAGCTTTCCTTATTCTACTTGAAGAAAGCATTGTGTGTGAAGTGGTTGAACGTTTAGTAGCTTCTTGGTGGCTTTGCATTATCCATTTTTGTTACTTACAGAATGTATGAAGTATCATTCTGGAGATCCTTGCTCTAATATAATACTCACTATCGCTTGTGATAGAGTTGGTTGACTGTGTGCTATTTTTATTATGATCGCAGGTCGCTTGTGCACTAGTTATGTCCGGTGAAGATCTTGAGAATCATACTGTGGTTAAGGACACACTCGTTCAGATGGGTATCTATTTTCAAGTTCAGGTATATTACTTTTGCTTGAATAGTTGAATAATGATCTTGATTTTCTCTACATTGCTAAGGCTTGAAGTCACATTCATATTATCTGAACCACAATCTTAGCTTGTTAGGAGGTGTTCAAGCTGACGTTTGATTCTAAAACACAGCCCTAAATCTATTTAACCATATCTTCTAAATCCCAACTTTTAATCAAAGGATCTTAGTTTTTCCCTTCAGGAGTTGCCCACAGTTAATTTGCTTCATAGCCTCCAAACTTTGTGATGCATCTTTGCCTTGTAATTCTTTTCTCAGTGGGTTATTTTTCTTTTATTTCTTTTAATCCATGTCCTGTGGCGTTGTAATCGTTTCAACAGGATGATTATCTAGATTGTTTCGGCGATCCTGAAACCATAGGAAAGGTGAGTGCCTCTACATGTTAAACTTTTCACACCTTTTGCAGCTCTGATGAATCTTATATTCACGAAGTTCTTGCATCAACTTGTATGTTGTCAGGTGGGAACAGACATAGAAGATTTCAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAACTTTGCAACGAGGAACAGAAGAAATTGTTACATGTAAATATGCCATGTCTTAAAATCCATCATTGTTTTCTCCTGTTTTGCAAGAAGTTGCTCATTTTTATGTTTTTCCAGGAGGCTTATGGGAAACCAGACCTGGAAAATGTTGCGAAAGTAAAAGCTCTCTACAAGGAGCTCGATATCGAGGTTAGTTCTACACAGCCTCATAGATCTAGAACCTTGCTCAGTTTGTAACAATAATGAATATGAGAAGTTAAGACTCCATAAGTCTAATTATTGATGGAACAAAGAAAAGTTCAGTCCCTTCTCTTTCAGTTGCTTATTGTAGTTCCCTTTGGACAGGGTGTATTTGCGGAGTATGAGAGCCAGAGCTACGCTGAACTGAATGCCACCATTGAAGCTCATCCCAGCAAATCAATTCAAGCTGTTCTGAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGAGCTACTCCTACTTTCCTGTCCCCCCGGCTTTGGCTTCATCATTCTTAGGAAGCTTGGATGGTATGCAGATCTTCTTGCTAGCTTCTGATTTACAACTTTATTTTATTGTCTCTGAATAAGGTTCCGACGACCTTTATTCATAGCGATTTGGTATTGGAATCCTTTTAATTTTCTGCTTTGATATTTTTCTGAGAATTACGACGAGGACCCAAATTTTCTGCTTTGATATTCATCTGAGATTCAATTGTTAGCTCACCAATTAATTTATGTTTACTTTGGATTAGTAGCTTTTTGGATGTAGTCACTATGATTCCTTTTATGAGGAGAGGTTCCCTATCTCTTGATTTCTAGAGCCATTTTTGGCAAGTAGTTTACAAAGAATTGCCTTGCATTCTGATTTATTCTATGCCTCTACCTACTTGGTCCGTTTTAGGTAAACATATTTACTCCCCTTTGGTCAAGTTTCTTTGAGCTTTCTTCATGCATGTGATGTAAAGTTTTGACATTTCTTCATGCCTG TATATTATTAGTGAAACTACTAAATTGCCCTTTCGTGAACCGAAGCTGATAGAAGCCTGTCTTACTTGGTTTGTTCAAATCCGCAGTTTAGGAGAGGAGAGTTGAATGTCTGAGAAAACGAGCCAGAGGCGAATTTCGACTCTCAGTTGAATTTCCATTCCCGAGATTTTTCATCTTTGTTGCTTAATTTTGAAGCTAGATCGATTCATTGTTGATTCTTGTAGGTTTTTGTTGTTTCTCTGTGTGTGTGTGTGTGTCTGTGCGTTCTTGCGCTCTCTTCTATGACGGATCTCAAGTCAACCTTTCTCAACGTCTACTCGGTTCTGAAGGCTGAGCTTCTTCAGGACCCTGCGTTTGAGTATACGGATGTTTCTCGCCAATGGATCGAGCGGATGCTGGATTACAATGTGCCTGGAGGAAAGCTTAACCGAGGGCTCTCGGTTATCGATAGCTACAGATTATTGAAAGAATGGAAGGAATTGACTGAAGATGAGATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAAGCGTATTTTCTTGTTCTCGATGATATTATGGACAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTTAACGATGGAGTTCTACTTCGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTTGATTTGTTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCTTTGTCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTACTATTCTTTTTACCTACCAGTCGCTTGTGCACTAGTTATGTCCGGTGAAGATCTTGAGAATCATACTGTGGTTAAGGACACACTCGTTCAGATGGGTATCTATTTTCAAGTTCAGGATGATTATCTAGATTGTTTCGGCGATCCTGAAACCATAGGAAAGGTGGGAACAGACATAGAAGATTTCAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAACTTTGCAACGAGGAACAGAAGAAATTGTTACATGAGGCTTATGGGAAACCAGACCTGGAAAATGTTGCGAAAGTAAAAGCTCTCTACAAGGAGCTCGATATCGAGGGTGTATTTGCGGAGTATGAGAGCCAGAGCTACGCTGAACTGAATGCCACCATTGAAGCTCATCCCAGCAAATCAATTCAAGCTGTTCTGAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGAGCTACTCCTACTTTCCTGTCCCCCCGGCTTTGGCTTCATCATTCTTAGGAAGCTTGGATGGTATGCAGATCTTCTTGCTAGCTTCTGATTTACAACTTTATTTTATTGTCTCTGAATAAGGTTCCGACGACCTTTATTCATAGCGATTTGGTATTGGAATCCTTTTAATTTTCTGCTTTGATATTTTTCTGAGAATTACGACGAGGACCCAAATTTTCTGCTTTGATATTCATCTGAGATTCAATTGTTAGCTCACCAATTAATTTATGTTTACTTTGGATTAGTAGCTTTTTGGATGTAGTCACTATGATTCCTTTTATGAGGAGAGGTTCCCTATCTCTTGATTTCTAGAGCCATTTTTGGCAAGTAGTTTACAAAGAATTGCCTTGCATTCTGATTTATTCTATGCCTCTACCTACTTGGTCCGTTTTAGGTAAACATATTTACTCCCCTTTGGTCAAGTTTCTTTGAGCTTTCTTCATGCATGTGATGTAAAGTTTTGACATTTCTTCATGCCTG ATGACGGATCTCAAGTCAACCTTTCTCAACGTCTACTCGGTTCTGAAGGCTGAGCTTCTTCAGGACCCTGCGTTTGAGTATACGGATGTTTCTCGCCAATGGATCGAGCGGATGCTGGATTACAATGTGCCTGGAGGAAAGCTTAACCGAGGGCTCTCGGTTATCGATAGCTACAGATTATTGAAAGAATGGAAGGAATTGACTGAAGATGAGATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAAGCGTATTTTCTTGTTCTCGATGATATTATGGACAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTTAACGATGGAGTTCTACTTCGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTTGATTTGTTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCTTTGTCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTACTATTCTTTTTACCTACCAGTCGCTTGTGCACTAGTTATGTCCGGTGAAGATCTTGAGAATCATACTGTGGTTAAGGACACACTCGTTCAGATGGGTATCTATTTTCAAGTTCAGGATGATTATCTAGATTGTTTCGGCGATCCTGAAACCATAGGAAAGGTGGGAACAGACATAGAAGATTTCAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAACTTTGCAACGAGGAACAGAAGAAATTGTTACATGAGGCTTATGGGAAACCAGACCTGGAAAATGTTGCGAAAGTAAAAGCTCTCTACAAGGAGCTCGATATCGAGGGTGTATTTGCGGAGTATGAGAGCCAGAGCTACGCTGAACTGAATGCCACCATTGAAGCTCATCCCAGCAAATCAATTCAAGCTGTTCTGAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGA MTDLKSTFLNVYSVLKAELLQDPAFEYTDVSRQWIERMLDYNVPGGKLNRGLSVIDSYRLLKEWKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMSGEDLENHTVVKDTLVQMGIYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEEQKKLLHEAYGKPDLENVAKVKALYKELDIEGVFAEYESQSYAELNATIEAHPSKSIQAVLKSFLGKIYKRQK
BLAST of CmaCh13G003280 vs. Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1) HSP 1 Score: 592.4 bits (1526), Expect = 3.1e-168 Identity = 284/342 (83.04%), Postives = 313/342 (91.52%), Query Frame = 1
BLAST of CmaCh13G003280 vs. Swiss-Prot
Match: FPPS2_LUPAL (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1) HSP 1 Score: 583.9 bits (1504), Expect = 1.1e-165 Identity = 279/342 (81.58%), Postives = 310/342 (90.64%), Query Frame = 1
BLAST of CmaCh13G003280 vs. Swiss-Prot
Match: FPPS1_ARATH (Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2) HSP 1 Score: 574.3 bits (1479), Expect = 8.7e-163 Identity = 270/341 (79.18%), Postives = 307/341 (90.03%), Query Frame = 1
BLAST of CmaCh13G003280 vs. Swiss-Prot
Match: FPPS2_ARATH (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-161 Identity = 271/342 (79.24%), Postives = 305/342 (89.18%), Query Frame = 1
BLAST of CmaCh13G003280 vs. Swiss-Prot
Match: FPPS2_PARAR (Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 7.7e-159 Identity = 267/341 (78.30%), Postives = 301/341 (88.27%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TrEMBL
Match: K7NBV9_SIRGR (Farnesyl diphosphate synthase OS=Siraitia grosvenorii PE=2 SV=1) HSP 1 Score: 653.7 bits (1685), Expect = 1.3e-184 Identity = 319/342 (93.27%), Postives = 329/342 (96.20%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TrEMBL
Match: A0A076JDS1_GYNPE (Farnesyl diphosphate synthase OS=Gynostemma pentaphyllum PE=2 SV=1) HSP 1 Score: 636.3 bits (1640), Expect = 2.1e-179 Identity = 308/342 (90.06%), Postives = 326/342 (95.32%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TrEMBL
Match: A0A0A0K801_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017060 PE=3 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 1.9e-172 Identity = 303/342 (88.60%), Postives = 316/342 (92.40%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TrEMBL
Match: Q8RVK7_MALDO (Farnesyl pyrophosphate synthase OS=Malus domestica GN=FPPS PE=2 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 3.3e-169 Identity = 288/342 (84.21%), Postives = 320/342 (93.57%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TrEMBL
Match: W5VY26_PYRCO (Farnesyl pyrophosphate synthase OS=Pyrus communis PE=2 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 7.4e-169 Identity = 286/342 (83.63%), Postives = 318/342 (92.98%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TAIR10
Match: AT5G47770.1 (AT5G47770.1 farnesyl diphosphate synthase 1) HSP 1 Score: 574.3 bits (1479), Expect = 4.9e-164 Identity = 270/341 (79.18%), Postives = 307/341 (90.03%), Query Frame = 1
BLAST of CmaCh13G003280 vs. TAIR10
Match: AT4G17190.1 (AT4G17190.1 farnesyl diphosphate synthase 2) HSP 1 Score: 570.5 bits (1469), Expect = 7.1e-163 Identity = 271/342 (79.24%), Postives = 305/342 (89.18%), Query Frame = 1
BLAST of CmaCh13G003280 vs. NCBI nr
Match: gi|659126192|ref|XP_008463060.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo]) HSP 1 Score: 660.6 bits (1703), Expect = 1.5e-186 Identity = 320/342 (93.57%), Postives = 333/342 (97.37%), Query Frame = 1
BLAST of CmaCh13G003280 vs. NCBI nr
Match: gi|449441191|ref|XP_004138366.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis sativus]) HSP 1 Score: 657.1 bits (1694), Expect = 1.6e-185 Identity = 318/342 (92.98%), Postives = 331/342 (96.78%), Query Frame = 1
BLAST of CmaCh13G003280 vs. NCBI nr
Match: gi|343466171|gb|AEM42979.1| (farnesyl diphosphate synthase [Siraitia grosvenorii]) HSP 1 Score: 653.7 bits (1685), Expect = 1.8e-184 Identity = 319/342 (93.27%), Postives = 329/342 (96.20%), Query Frame = 1
BLAST of CmaCh13G003280 vs. NCBI nr
Match: gi|671183990|gb|AII72208.1| (farnesyl diphosphate synthase [Gynostemma pentaphyllum]) HSP 1 Score: 636.3 bits (1640), Expect = 3.0e-179 Identity = 308/342 (90.06%), Postives = 326/342 (95.32%), Query Frame = 1
BLAST of CmaCh13G003280 vs. NCBI nr
Match: gi|700190686|gb|KGN45890.1| (hypothetical protein Csa_6G017060 [Cucumis sativus]) HSP 1 Score: 613.2 bits (1580), Expect = 2.7e-172 Identity = 303/342 (88.60%), Postives = 316/342 (92.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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