ClCG01G011400 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGAGGGAGAGAGTTGAATGTCCGAGAAAACGAACCGGAGAAGAATTTACATTGCCAAGATTTTCCATTTCTGAAGCTAGACCGATTCATTGTTGATTCTTCTAGGTTTTTTCGTTTCTCTATCTTACTCTGTGTGTGTGTGTGTGTGTGTTCTTGCTTTCTCTTCTATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAGGATGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGATCGAACGGGTAACGTCTTTTACTCTTTTCTATTTTTTGTTGTTCCTGATACTCTGTTCTGCTAGTTTATATGTGGTTGCAATTTCCTTCTTGTTTCTTCGTTTTGAATCCGAAACTCTGCAGGATTTCTTTTGTTTATGTTAATACTGGAGAGGTTCATTCATATTCGTACAGCATTATGAGTGTGTGAGAGTGATGTCAATTTGAAGGGATGAAAATCGCTTTAAGGTTTTTATTTTCTTGCGATAATGACGTATGTTTGTTTGTTCAGTTTGATCCTTTACTATGAGTAACATATATTGATTTCTTCCTATTCACTTCTCAACTTCGCTCTTTTCTTCATTACTATAAGTCAACTCATCTCAAAAAGCGAGTGCTATTTATTTCTGTTTGTCATTTTGGAAATTGTTGGCCTATTTCTGTAATTGTGAGCTGTTTAAAGAACTGGATAAGAAACTAATGGAAGGTATTTCGGGGATGGTGGTCATAGATTTGATTTCATGGTTAAGGAACCGAGAAATAGAGTCCTTAGATCTGTATATTGTTTACCTTGGCTAAGAATAGGGGGTGTTTGGAGGACCGTAATGGGATGGAATTGTAATGTAATATAATCCAAAATCAATGTTTGGATTGAGTGTTTTGGGCTCGATTTGTAATACAAAACTTATTCCATTCCGACAGTTTTCAACCCAACTCCCATTTCCTACCATTTTCATGCTTCATGATCTCATTTTCGTTTCTTCCCCGAGTCCTCACCCATTCCAATACTCCTATGATTCCTAGTAATCCTATTATATTTCAGCTCTCCAAACAGCCCCTAAGATTATATGGTTTGACTCCCTTGATATTCCCATTCACCTATTGTGTTTCATCAATCAAATCAATCAAATTAAGATATGAAATTCGATATATTATTCTAACCAATCAATTTCTTTCTTCATAGGCTTTGGGTCATCAATCTACGTGGTTTCCATTTAACAGTTGATTCTAGTTTGTCTTCTCATTGTTTACTGTTTACTTGGTTCTTTACAGATGCTGGACTACAATGTGCCTGGAGGTGGGAAATAATCACTTGAAAAATTCCGTGTTCGTTGATCATATAATTGGACATGTCAGATTATTCATGGACATTTTGATGAGGAAGTAAGCTGACTTCTAACGGGAAGTTATTTTTTCCTGCAGGCAAGCTTAACCGAGGGCTCTCCGTCATCGATAGCTACAAATTATTGAAAGAAGGGAAGGAATTGACTGAAGATGAAATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGGTAAGGCATAACTATACAACTCATCTTATTAGCCTATTTGGAGGATTGATGAACTGATATCCATATCCTTCTGAACTTTCTTAAATCTCTGCAGCTCCAGGCGTATTTTCTTGTTCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTTGTGTCTAGGAAACAACATATAGCATTCTTCAATCTGTAATTGTAATTGCACTATACAATTGAAGAGTCTAAGCTATTCTTGGTAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTACTTCGAAATCATATTCCTAGAATGCTAAAAAATCACTTCAAAGGGAAGCCGTATTACGTTGATCTGCTTGATTTGTTTAACGAGGTGGTTTCTTGACAATGACTAGCATGGGTTTATTCCAATCATGATCTACATAACATGCTAACAATGATGTTTTTCATGTTCAAATAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACTATCGATGGAGAAAAAGATCTTTCCAAATATGCATTGTCACTGTGCGTTTCAACTTTCAAACCCTTTTTTGGCTTCCTTTAGTTGGTGCAATAAAGTCAAAACGGTATATGTCATACTATATGTGCAAAAGAACCGGATAAACTAGGAACTTTATTTGGTCTTTTCAACTTCAAATCAAAATAATATGACAAATCATAGCCCTTGTATATTCTGTATATTAATTTGAGGTGGTTTCTAATGCACATATAATATGAATTTTGCAGTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTGAGTAGCTTTTCCTTGCTTTACTTGAAGCAAGCAGTGTGTGTGAGTGGTTAAACACTTGGTAGCTTCTTGGTGGCTTTGCATTATTCATTTTTGCTAAATACAGAGGGTGAAATATTATTCTTGGTCTAATACATACTCACTATTGTTTGTGATAGATTTGGTTTACCGTGTGCTGTTTTTGTCATGATTGCAGGTTGCTTGTGCACTAGTTATGTCAGGTGAAGATCTTGAGAAACATACAGTGGTTAAAGACATTCTTGTTCAGATGGGTGTCTATTTTCAAGTTCAGGTAGCGAAATTGATTGCTGATCTTGATTTTCTCTAGATTCTTGAGGCTTGATGTCACATTCACATTATCCGAACCACACTTCAGTTTTTTAAGAGGGTTTGGTTCTAAAACATTCCCCTAATCCTCTTTAACATTTCTTCAAAATCGAATGCTTATCTGCTTTTAATCAGAGGATCTTAGCTTTTGCCTTCACGAGGTGTCCACAATAAATTTTGCTCCATGTACTCCAAGTTTTGTGATGCATCTCTGTCTTGTAATTCTTTTCTCTAGTGGGAAAATGTGTGTTTTTTTAATCTCTTGTCCTGTGGCTTTGTAATTGTTTCAACAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGAGTCAAGTCCTGTATGAGTTAAACTTTTCACGCATGCAGGTCTGATGAATCTTATATTCAGAGTTCTTGAATCAACTTGTATGTTGTCAGGTGGGAACGGACATTGAAGATTTCAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAACTTTGCAACGAGGATCAGAAGAAGTTATTACACGTAAATGTCGCATGTTTTAAAATCCTTAATTGTTTTCTTATCTGTCTTGCAAGAAGTTGCTCATTTTTTTTTTTCTTTTTCATTTTTTTTATTTATTTTTTTATTTTTTTTATTTTTTATGTTTTTCCAGGAGGCTTATGGGAAACCAGACCCAGAAAATGTTGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGTCTGAGCTACACTACATTGTAGAAACTAGAACCTCCCTCATTTTACAACAAGAAATAATATAAGTTAAGACCTTACAGTAAAATAGTTAAAATTACTTTTACCAAAACCCTTAGAAATGCTTCTGAAAGAGCGCTTACTTCGATGTTTTTTTACTTCATCTCTGACTTTTTTATAGAAAAATATTTGGGTGCATTTTGGGTTGCACCCATCTCCATGCAGCTCATCAAAATGTTTAATCATTAGTTACTACGTAACAAACTTTTTTTTTTTTCTTTTTTTGAGATATTTTTTATATTCCTTTTCCATTGGTGATTGAAAAGAATCTATGGAGATGGGTGCAACCTAGGCTACATCCAAGTATTGCTCTTTCTTATAATACTTTGTCTTAATAGTACATTTTCTCACAAACTTCTTTCTACATATTTAATAAATCTCTTTCTTCAAGCTTATTTTCCTTAATAACTTGTTTTCTATGCACATTTCGTCTCGCCAGTTTCTCTCCACATATATACTCTCTCATCAACTTGTTTTCTATGCACATTTCGTCTCGCCAGTTTCTCTCCAGATATATACTCTCTCATCAACCTGTCTTCATATGTAGTCTCTTTGCTGTATACATGATCTCTCTCATTGATGGCCTTTTGATCCACTTTTTCTCATCTATTCAATTCTTTTTAGATTTCACTTTTGTTCTTTTGAATTTCAATTAGTGTCATTTTAGCGATCTTTCAATTTTAGAAGAAACAAAGAAGGAAGTAAAACACTTATTAAATTGTTTCTATTTTTAAAATTTTTTATTTTTAGTAGTGTTTTTTATACTTGTTATGAAGCACTCCAAAACACAGCATACTAATTATTGATGGAACCAAGAAATTGTTGTGTCAACTCCATAAGTTTAGTCCTTTCATTTTCAGTTGCTTATTGTAGTTCACTTTGGACAGGGTGTATTTGCGGAGTATGAGAGCCAGAGCTACGCTAAACTGAATGCCTCCATTGAAGCTCATCCCAACAAATCAATTCAAGCAGTTCTTAAGTCTTTCTTGGGTAAAATATACAGGCGCCAGAAGTGAGCTGCTCCTACTTCTGCTCCCCCTGTGGCTTTGGCTTCAGCATTCTTATAGTAAGCTTGGATTTTACACCGATCCTTCTTACTAGCTTCTCATTTTCATTTTTTTTTTACTTTTGGTCTCGGAATAAGGTTCCACGACCTTTATTCATAATCATTCGGTATTGGAATCCTTTTTCTTGTCTGTTTTAATATTCTTCTGAGAATTACCATGAGAACCAAAATTTGATCTCTTCAAGAAAACATAGAATGATTCTCA CAGGAGGGAGAGAGTTGAATGTCCGAGAAAACGAACCGGAGAAGAATTTACATTGCCAAGATTTTCCATTTCTGAAGCTAGACCGATTCATTGTTGATTCTTCTAGGTTTTTTCGTTTCTCTATCTTACTCTGTGTGTGTGTGTGTGTGTGTTCTTGCTTTCTCTTCTATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAGGATGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGATCGAACGGATGCTGGACTACAATGTGCCTGGAGGCAAGCTTAACCGAGGGCTCTCCGTCATCGATAGCTACAAATTATTGAAAGAAGGGAAGGAATTGACTGAAGATGAAATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAGGCGTATTTTCTTGTTCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTACTTCGAAATCATATTCCTAGAATGCTAAAAAATCACTTCAAAGGGAAGCCGTATTACGTTGATCTGCTTGATTTGTTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACTATCGATGGAGAAAAAGATCTTTCCAAATATGCATTGTCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTTGCTTGTGCACTAGTTATGTCAGGTGAAGATCTTGAGAAACATACAGTGGTTAAAGACATTCTTGTTCAGATGGGTGTCTATTTTCAAGTTCAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGGGAACGGACATTGAAGATTTCAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAACTTTGCAACGAGGATCAGAAGAAGTTATTACACGAGGCTTATGGGAAACCAGACCCAGAAAATGTTGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGGTGTATTTGCGGAGTATGAGAGCCAGAGCTACGCTAAACTGAATGCCTCCATTGAAGCTCATCCCAACAAATCAATTCAAGCAGTTCTTAAGTCTTTCTTGGGTAAAATATACAGGCGCCAGAAGTGAGCTGCTCCTACTTCTGCTCCCCCTGTGGCTTTGGCTTCAGCATTCTTATAGTAAGCTTGGATTTTACACCGATCCTTCTTACTAGCTTCTCATTTTCATTTTTTTTTTACTTTTGGTCTCGGAATAAGGTTCCACGACCTTTATTCATAATCATTCGGTATTGGAATCCTTTTTCTTGTCTGTTTTAATATTCTTCTGAGAATTACCATGAGAACCAAAATTTGATCTCTTCAAGAAAACATAGAATGATTCTCA ATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAGGATGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGATCGAACGGATGCTGGACTACAATGTGCCTGGAGGCAAGCTTAACCGAGGGCTCTCCGTCATCGATAGCTACAAATTATTGAAAGAAGGGAAGGAATTGACTGAAGATGAAATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAGGCGTATTTTCTTGTTCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTACTTCGAAATCATATTCCTAGAATGCTAAAAAATCACTTCAAAGGGAAGCCGTATTACGTTGATCTGCTTGATTTGTTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACTATCGATGGAGAAAAAGATCTTTCCAAATATGCATTGTCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTTGCTTGTGCACTAGTTATGTCAGGTGAAGATCTTGAGAAACATACAGTGGTTAAAGACATTCTTGTTCAGATGGGTGTCTATTTTCAAGTTCAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGGGAACGGACATTGAAGATTTCAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAACTTTGCAACGAGGATCAGAAGAAGTTATTACACGAGGCTTATGGGAAACCAGACCCAGAAAATGTTGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGGTGTATTTGCGGAGTATGAGAGCCAGAGCTACGCTAAACTGAATGCCTCCATTGAAGCTCATCCCAACAAATCAATTCAAGCAGTTCTTAAGTCTTTCTTGGGTAAAATATACAGGCGCCAGAAGTGA MADLKSTFLKVYSVLKDELLQDPAFEFTDASRQWIERMLDYNVPGGKLNRGLSVIDSYKLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIDGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMSGEDLEKHTVVKDILVQMGVYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEDQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAHPNKSIQAVLKSFLGKIYRRQK
BLAST of ClCG01G011400 vs. Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 1.8e-168 Identity = 284/342 (83.04%), Postives = 312/342 (91.23%), Query Frame = 1
BLAST of ClCG01G011400 vs. Swiss-Prot
Match: FPPS2_LUPAL (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 1.4e-165 Identity = 278/342 (81.29%), Postives = 309/342 (90.35%), Query Frame = 1
BLAST of ClCG01G011400 vs. Swiss-Prot
Match: FPPS2_ARATH (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 3.3e-162 Identity = 271/342 (79.24%), Postives = 304/342 (88.89%), Query Frame = 1
BLAST of ClCG01G011400 vs. Swiss-Prot
Match: FPPS2_PARAR (Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 2.2e-161 Identity = 272/340 (80.00%), Postives = 302/340 (88.82%), Query Frame = 1
BLAST of ClCG01G011400 vs. Swiss-Prot
Match: FPPS1_PARAR (Farnesyl pyrophosphate synthase 1 OS=Parthenium argentatum GN=FPS1 PE=2 SV=1) HSP 1 Score: 569.3 bits (1466), Expect = 2.8e-161 Identity = 272/341 (79.77%), Postives = 305/341 (89.44%), Query Frame = 1
BLAST of ClCG01G011400 vs. TrEMBL
Match: Q8RVK7_MALDO (Farnesyl pyrophosphate synthase OS=Malus domestica GN=FPPS PE=2 SV=1) HSP 1 Score: 606.7 bits (1563), Expect = 1.8e-170 Identity = 287/342 (83.92%), Postives = 325/342 (95.03%), Query Frame = 1
BLAST of ClCG01G011400 vs. TrEMBL
Match: E6Y2M9_SALMI (Farnesyl diphosphate synthetase OS=Salvia miltiorrhiza PE=2 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 3.9e-170 Identity = 284/341 (83.28%), Postives = 319/341 (93.55%), Query Frame = 1
BLAST of ClCG01G011400 vs. TrEMBL
Match: W5VY26_PYRCO (Farnesyl pyrophosphate synthase OS=Pyrus communis PE=2 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 3.9e-170 Identity = 285/342 (83.33%), Postives = 323/342 (94.44%), Query Frame = 1
BLAST of ClCG01G011400 vs. TrEMBL
Match: Q8L7F4_HEVBR (Farnesyl diphosphate synthase OS=Hevea brasiliensis GN=FDP PE=2 SV=1) HSP 1 Score: 604.7 bits (1558), Expect = 6.7e-170 Identity = 289/342 (84.50%), Postives = 319/342 (93.27%), Query Frame = 1
BLAST of ClCG01G011400 vs. TrEMBL
Match: A0A0S3J2X4_HEVBR (Farnesyl diphosphate synthase OS=Hevea brasiliensis GN=FDPS PE=3 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 3.3e-169 Identity = 288/342 (84.21%), Postives = 318/342 (92.98%), Query Frame = 1
BLAST of ClCG01G011400 vs. TAIR10
Match: AT4G17190.1 (AT4G17190.1 farnesyl diphosphate synthase 2) HSP 1 Score: 572.4 bits (1474), Expect = 1.9e-163 Identity = 271/342 (79.24%), Postives = 304/342 (88.89%), Query Frame = 1
BLAST of ClCG01G011400 vs. TAIR10
Match: AT5G47770.1 (AT5G47770.1 farnesyl diphosphate synthase 1) HSP 1 Score: 568.9 bits (1465), Expect = 2.1e-162 Identity = 265/340 (77.94%), Postives = 306/340 (90.00%), Query Frame = 1
BLAST of ClCG01G011400 vs. NCBI nr
Match: gi|659126192|ref|XP_008463060.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo]) HSP 1 Score: 677.9 bits (1748), Expect = 9.0e-192 Identity = 332/342 (97.08%), Postives = 339/342 (99.12%), Query Frame = 1
BLAST of ClCG01G011400 vs. NCBI nr
Match: gi|671183990|gb|AII72208.1| (farnesyl diphosphate synthase [Gynostemma pentaphyllum]) HSP 1 Score: 639.8 bits (1649), Expect = 2.7e-180 Identity = 311/342 (90.94%), Postives = 328/342 (95.91%), Query Frame = 1
BLAST of ClCG01G011400 vs. NCBI nr
Match: gi|700190686|gb|KGN45890.1| (hypothetical protein Csa_6G017060 [Cucumis sativus]) HSP 1 Score: 625.2 bits (1611), Expect = 6.9e-176 Identity = 312/342 (91.23%), Postives = 321/342 (93.86%), Query Frame = 1
BLAST of ClCG01G011400 vs. NCBI nr
Match: gi|702350931|ref|XP_010057769.1| (PREDICTED: farnesyl pyrophosphate synthase 1 isoform X1 [Eucalyptus grandis]) HSP 1 Score: 615.5 bits (1586), Expect = 5.5e-173 Identity = 293/342 (85.67%), Postives = 322/342 (94.15%), Query Frame = 1
BLAST of ClCG01G011400 vs. NCBI nr
Match: gi|1012107645|ref|XP_015959127.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Arachis duranensis]) HSP 1 Score: 608.2 bits (1567), Expect = 8.7e-171 Identity = 292/342 (85.38%), Postives = 319/342 (93.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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